CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP034724	Salmonella enterica subsp. enterica serovar Stanleyville strain RSE01 plasmid pRSE01, complete sequence	0 crisprs	NA	0	0	1	0
CP034723	Salmonella enterica subsp. enterica serovar Stanleyville strain RSE01 chromosome, complete genome	2 crisprs	PD-DExK,WYL,csa3,cas3,DEDDh,DinG,c2c9_V-U4,RT	0	7	8	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

43522 : 52081

Shigella_phage(16.67%)

transposase,integrase

attL 25186:25202|attR 47715:47731

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
25186:25202	attL	NA	NA	NA	NA
AZT70542.1\|43522_44726_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.1e-115	70.8
AZT70543.1\|45412_45631_+	type II toxin-antitoxin system antitoxin CcdA	NA	NA	NA	NA
AZT70544.1\|45632_45938_+	type II toxin-antitoxin system toxin CcdB	NA	NA	NA	NA
AZT70545.1\|46246_47029_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	3.5e-51	91.1
AZT70546.1\|47179_48121_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	1.4e-73	55.0
47715:47731	attR	NA	NA	NA	NA
AZT70547.1\|48546_49752_+	ParA family protein	A0A077SL49	Escherichia_phage	1.4e-163	69.6
AZT70548.1\|49748_50726_+	ParB/RepB/Spo0J family partition protein	A0A1B0V750	Salmonella_phage	2.0e-83	52.9
AZT70549.1\|50806_52081_-	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	5.0e-156	64.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP034723

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CRISPR-Cas detection and classification

Crispr_ID: CP034723_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034723_2

942095-942918

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAAC	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

13 spacers

The CRISPR arrays of CP034723_2

>merge|CP034723|2|942095-942918|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGTAAAGATGACTGCCTGTTCTATCCATTTGAACGTGTTCCCCGCGCCAGCGGGGATAAACCCGTTGCTCAAAAAACTGAACGAGGGTAACTACCGTGTTCCCCGCGCCAGCGGGGATAAACCGATTGTGTTGTCGCCGCTAGTGGCTTGGGTTAAGTGTTCCCCGCGCCAGCGGGGATAACCGAATATCCACTTAAACACAACCATTATTCGCTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTATTCAGCTCTTGCCGCAATATGCCGCTCAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGCATCAGCGCCGATCCGTTCATAGTGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGAACAGGAACAGGAAAAAAAAAAAGATTTGTCCGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGAATATCTATAACGGAGCCGTTTTCATTGAGCGGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGATATTCATTGAGCGCTGGAAATTCAAAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGTCATTTTAAAGAATCCCGTTAAACAACACGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGGTTATGCGCAAAAATTAATTCATATTATAGTGTTCCCCGCGCCAGCAGGGATAAACCGGACGAGTTCTGGAAATGGTTAGCTGATAAAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTCATCGGCAGCGTCACGCAATATGAAGATGTGTTCCCCGCGCCAACAAGGATAGCCGT

>CP034723|2|1|942095-942855|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGTAAAGATGACTGCCTGTTCTATCCATTTGAAC
GTGTTCCCCGCGCCAGCGGGGATAAAC	CCGTTGCTCAAAAAACTGAACGAGGGTAACTACC
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGATTGTGTTGTCGCCGCTAGTGGCTTGGGTTAA
GTGTTCCCCGCGCCAGCGGGGATAACC	GAATATCCACTTAAACACAACCATTATTCGCTA
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGGTATTCAGCTCTTGCCGCAATATGCCGCTCAA
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGCCGGCATCAGCGCCGATCCGTTCATAGTGCCC
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGAACAGGAACAGGAAAAAAAAAAAGATTTGTCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGAATATCTATAACGGAGCCGTTTTCATTGAGCG
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGTGGATATTCATTGAGCGCTGGAAATTCAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGCGGTCATTTTAAAGAATCCCGTTAAACAACAC
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGCAGGTTATGCGCAAAAATTAATTCATATTATA
GTGTTCCCCGCGCCAGCAGGGATAAAC	CGGACGAGTTCTGGAAATGGTTAGCTGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAAC

>CP034723|2|2|942095-942918|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAAGATGACTGCCTGTTCTATCCATTTGAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCC	GTTGCTCAAAAAACTGAACGAGGGTAACTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTGTGTTGTCGCCGCTAGTGGCTTGGGTTAA
GTGTTCCCCGCGCCAGCGGGGATAACCGA	ATATCCACTTAAACACAACCATTATTCGCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTATTCAGCTCTTGCCGCAATATGCCGCTCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGCATCAGCGCCGATCCGTTCATAGTGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGGAACAGGAAAAAAAAAAAGATTTGTCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATATCTATAACGGAGCCGTTTTCATTGAGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGATATTCATTGAGCGCTGGAAATTCAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTCATTTTAAAGAATCCCGTTAAACAACAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTTATGCGCAAAAATTAATTCATATTATA
GTGTTCCCCGCGCCAGCAGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTCATCGGCAGCGTCACGCAATATGAAGAT
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>CP034723|2|1|942095-942918|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAAGATGACTGCCTGTTCTATCCATTTGAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCC	GTTGCTCAAAAAACTGAACGAGGGTAACTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTGTGTTGTCGCCGCTAGTGGCTTGGGTTAA
GTGTTCCCCGCGCCAGCGGGGATAACCGA	ATATCCACTTAAACACAACCATTATTCGCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTATTCAGCTCTTGCCGCAATATGCCGCTCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGCATCAGCGCCGATCCGTTCATAGTGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGGAACAGGAAAAAAAAAAAGATTTGTCCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATATCTATAACGGAGCCGTTTTCATTGAGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGATATTCATTGAGCGCTGGAAATTCAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTCATTTTAAAGAATCCCGTTAAACAACAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTTATGCGCAAAAATTAATTCATATTATA
GTGTTCCCCGCGCCAGCAGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTCATCGGCAGCGTCACGCAATATGAAGAT
GTGTTCCCCGCGCCAACAAGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
CP034723.1\|AZT67213.1\|944193_944364_+\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	unknown
CP034723.1\|AZT67206.1\|935751_936339_-\|fimbrial-protein-SteA	unknown	unknown	gnl\|CDD\|185169
CP034723.1\|AZT67210.1\|941126_941798_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP034723.1\|AZT67201.1\|930642_931179_-\|fimbrial-protein-SteF	unknown	unknown	gnl\|CDD\|185168
CP034723.1\|AZT67212.1\|943902_944265_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP034723.1\|AZT67211.1\|943015_943813_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
CP034723.1\|AZT67220.1\|956269_956626_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
CP034723.1\|AZT67217.1\|952006_953053_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP034723.1\|AZT67215.1\|946487_948200_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
CP034723.1\|AZT67205.1\|932972_935672_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
CP034723.1\|AZT67208.1\|937972_939610_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
CP034723.1\|AZT67214.1\|944688_946488_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
CP034723.1\|AZT67207.1\|936944_937745_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP034723.1\|AZT67219.1\|954221_955661_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
CP034723.1\|AZT67218.1\|953303_954212_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP034723.1\|AZT67216.1\|948275_949010_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP034723.1\|AZT67204.1\|932186_932960_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185177
CP034723.1\|AZT67209.1\|939692_940991_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
CP034723.1\|AZT67202.1\|931175_931646_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
CP034723.1\|AZT67203.1\|931660_932167_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178

Protein	Function_ID	Function_description	E-value
CP034723.1\|AZT67206.1\|935751_936339_-\|fimbrial-protein-SteA	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	7.54308e-100
CP034723.1\|AZT67210.1\|941126_941798_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
CP034723.1\|AZT67201.1\|930642_931179_-\|fimbrial-protein-SteF	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	1.90105e-118
CP034723.1\|AZT67212.1\|943902_944265_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
CP034723.1\|AZT67211.1\|943015_943813_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	1.23812e-102
CP034723.1\|AZT67220.1\|956269_956626_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49
CP034723.1\|AZT67217.1\|952006_953053_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP034723.1\|AZT67215.1\|946487_948200_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP034723.1\|AZT67205.1\|932972_935672_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
CP034723.1\|AZT67208.1\|937972_939610_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP034723.1\|AZT67214.1\|944688_946488_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP034723.1\|AZT67207.1\|936944_937745_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	1.36327e-159
CP034723.1\|AZT67219.1\|954221_955661_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
CP034723.1\|AZT67218.1\|953303_954212_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP034723.1\|AZT67216.1\|948275_949010_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	8.83466e-139
CP034723.1\|AZT67204.1\|932186_932960_-\|fimbrial-protein	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
CP034723.1\|AZT67209.1\|939692_940991_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP034723.1\|AZT67202.1\|931175_931646_-\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	6.50885e-98
CP034723.1\|AZT67203.1\|931660_932167_-\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	3.13856e-105

>CP034723.1|AZT67210.1|941126_941798_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>CP034723.1|AZT67209.1|939692_940991_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP034723.1|AZT67208.1|937972_939610_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEHQKRQAK
>CP034723.1|AZT67207.1|936944_937745_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>CP034723.1|AZT67206.1|935751_936339_-|fimbrial-protein-SteA
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSLTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDTILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>CP034723.1|AZT67205.1|932972_935672_-|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSVSPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVVSDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKMLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTKTPPIPLADNHAVNRKDME
>CP034723.1|AZT67204.1|932186_932960_-|fimbrial-protein
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKAHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>CP034723.1|AZT67203.1|931660_932167_-|fimbrial-protein
MTMLTRWKILVLLCGGFVAGTEAAGTKTVQLELHLVVTQPPPCTIGGASVEFGDVLTTKVGDASQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
>CP034723.1|AZT67202.1|931175_931646_-|fimbrial-protein
MKRVLILTLLTTQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSANALTTNVPELGIELQQNGTVFPPGTSLTIDESSLPTLKAVPVKQPGTEPAEGDFEAFATLQVDYQ
>CP034723.1|AZT67201.1|930642_931179_-|fimbrial-protein-SteF
MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVLVTFQGVEDSTLPGLLALEPSSKASGFAIGVETAAQQPVSINATEGTAFVLKEGITTINLQARLQKYAGEDVMPGKFSSTVTVNFEYQ
>CP034723.1|AZT67211.1|943015_943813_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALIGGFHLRCASPFTMWRVRRFLQEHKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>CP034723.1|AZT67212.1|943902_944265_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>CP034723.1|AZT67213.1|944193_944364_+|6-pyruvoyl-tetrahydrobiopterin-synthase
MPFRHVWQAVSGFKGEIFIQRGGHDELSGNKKTAVGYRKAHFLSLTKTILRLVTGN
>CP034723.1|AZT67214.1|944688_946488_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMPRVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARTGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>CP034723.1|AZT67215.1|946487_948200_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESELHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGHTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGITFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPDILASLGELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>CP034723.1|AZT67216.1|948275_949010_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP034723.1|AZT67217.1|952006_953053_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>CP034723.1|AZT67218.1|953303_954212_+|sulfate-adenylyltransferase-subunit-2
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>CP034723.1|AZT67219.1|954221_955661_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEAYAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELNERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>CP034723.1|AZT67220.1|956269_956626_+|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG

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Crispr_ID: CP034723_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034723_3

951903-951990

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP034723_3

>merge|CP034723|3|951903-951990|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCGGCGGCCGGTTTGATTTAAGGGGATTTTATGAGGTGTTCCCCGCGCCAGCGGGGATAAAC

>CP034723|3|3|951903-951990|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGGCGGCCGGTTTGATTTAAGGGGATTTTATGAG
GTGTTCCCCGCGCCAGCGGGGATAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP034723.1\|AZT67213.1\|944193_944364_+\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	unknown
CP034723.1\|AZT67212.1\|943902_944265_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP034723.1\|AZT67226.1\|960117_960744_+\|protein-L-isoaspartate(D-aspartate)-O-methyltransferase	unknown	unknown	gnl\|CDD\|178974
CP034723.1\|AZT67222.1\|957146_957857_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
CP034723.1\|AZT67210.1\|941126_941798_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP034723.1\|AZT67207.1\|936944_937745_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP034723.1\|AZT67224.1\|958332_959382_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
CP034723.1\|AZT67211.1\|943015_943813_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
CP034723.1\|AZT67220.1\|956269_956626_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
CP034723.1\|AZT67221.1\|956816_957128_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
CP034723.1\|AZT67217.1\|952006_953053_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP034723.1\|AZT67215.1\|946487_948200_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
CP034723.1\|AZT67208.1\|937972_939610_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
CP034723.1\|AZT67214.1\|944688_946488_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
CP034723.1\|AZT67223.1\|957856_958336_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP034723.1\|AZT67219.1\|954221_955661_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
CP034723.1\|AZT67218.1\|953303_954212_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP034723.1\|AZT67216.1\|948275_949010_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP034723.1\|AZT67209.1\|939692_940991_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
CP034723.1\|AZT67225.1\|959362_960124_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732

Protein	Function_ID	Function_description	E-value
CP034723.1\|AZT67222.1\|957146_957857_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	4.09575e-119
CP034723.1\|AZT67212.1\|943902_944265_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
CP034723.1\|AZT67226.1\|960117_960744_+\|protein-L-isoaspartate(D-aspartate)-O-methyltransferase	gnl\|CDD\|178974	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase.	7.37904e-129
CP034723.1\|AZT67210.1\|941126_941798_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
CP034723.1\|AZT67207.1\|936944_937745_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	1.36327e-159
CP034723.1\|AZT67224.1\|958332_959382_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
CP034723.1\|AZT67211.1\|943015_943813_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	1.23812e-102
CP034723.1\|AZT67220.1\|956269_956626_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49
CP034723.1\|AZT67221.1\|956816_957128_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
CP034723.1\|AZT67218.1\|953303_954212_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP034723.1\|AZT67215.1\|946487_948200_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP034723.1\|AZT67208.1\|937972_939610_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP034723.1\|AZT67214.1\|944688_946488_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP034723.1\|AZT67223.1\|957856_958336_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	3.20925e-104
CP034723.1\|AZT67219.1\|954221_955661_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
CP034723.1\|AZT67216.1\|948275_949010_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	8.83466e-139
CP034723.1\|AZT67209.1\|939692_940991_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP034723.1\|AZT67217.1\|952006_953053_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP034723.1\|AZT67225.1\|959362_960124_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	7.64916e-147

>CP034723.1|AZT67216.1|948275_949010_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP034723.1|AZT67215.1|946487_948200_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESELHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGHTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGITFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPDILASLGELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>CP034723.1|AZT67214.1|944688_946488_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMPRVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARTGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>CP034723.1|AZT67213.1|944193_944364_+|6-pyruvoyl-tetrahydrobiopterin-synthase
MPFRHVWQAVSGFKGEIFIQRGGHDELSGNKKTAVGYRKAHFLSLTKTILRLVTGN
>CP034723.1|AZT67212.1|943902_944265_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>CP034723.1|AZT67211.1|943015_943813_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALIGGFHLRCASPFTMWRVRRFLQEHKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>CP034723.1|AZT67210.1|941126_941798_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>CP034723.1|AZT67209.1|939692_940991_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP034723.1|AZT67208.1|937972_939610_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEHQKRQAK
>CP034723.1|AZT67207.1|936944_937745_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>CP034723.1|AZT67217.1|952006_953053_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>CP034723.1|AZT67218.1|953303_954212_+|sulfate-adenylyltransferase-subunit-2
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>CP034723.1|AZT67219.1|954221_955661_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEAYAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELNERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>CP034723.1|AZT67220.1|956269_956626_+|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>CP034723.1|AZT67221.1|956816_957128_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>CP034723.1|AZT67222.1|957146_957857_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLTISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>CP034723.1|AZT67223.1|957856_958336_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDEVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>CP034723.1|AZT67224.1|958332_959382_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFRPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>CP034723.1|AZT67225.1|959362_960124_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQIKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW
>CP034723.1|AZT67226.1|960117_960744_+|protein-L-isoaspartate(D-aspartate)-O-methyltransferase
MVSGRVQALLEQLRAQGIRDEQVLNALAAVPREKFIDEAFEHKAWENIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVHHVCSVERIKGLQWQARRRLKQLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMAQLDEGGILVLPVGDEQQFLKRVRRRGGEFIIDTVEAVRFVPLVKGELA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP034723_2	2.18\|942428\|32\|CP034723\|CRISPRCasFinder,CRT	942428-942459	32	NC_011366	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence	208454-208485	7	0.781
CP034723_2	2.18\|942428\|32\|CP034723\|CRISPRCasFinder,CRT	942428-942459	32	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	449563-449594	7	0.781
CP034723_2	2.18\|942428\|32\|CP034723\|CRISPRCasFinder,CRT	942428-942459	32	NZ_CP035001	Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence	167100-167131	7	0.781
CP034723_2	2.6\|942426\|34\|CP034723\|PILER-CR	942426-942459	34	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	449561-449594	8	0.765
CP034723_2	2.17\|942367\|32\|CP034723\|CRISPRCasFinder,CRT	942367-942398	32	MH719082	Escherichia phage vB_EcoM_IME392, complete genome	105500-105531	8	0.75
CP034723_2	2.20\|942553\|32\|CP034723\|CRISPRCasFinder,CRT	942553-942584	32	NZ_CP043057	Dolichospermum sp. UHCC 0315A plasmid pUHCC0315a, complete sequence	59651-59682	8	0.75
CP034723_2	2.5\|942365\|34\|CP034723\|PILER-CR	942365-942398	34	NZ_CP050089	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence	207064-207097	9	0.735
CP034723_2	2.5\|942365\|34\|CP034723\|PILER-CR	942365-942398	34	MH719082	Escherichia phage vB_EcoM_IME392, complete genome	105498-105531	9	0.735
CP034723_2	2.6\|942426\|34\|CP034723\|PILER-CR	942426-942459	34	NC_011366	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence	208452-208485	9	0.735
CP034723_2	2.6\|942426\|34\|CP034723\|PILER-CR	942426-942459	34	NZ_CP042998	Aquisphaera giovannonii strain OJF2 plasmid pOJF2_1, complete sequence	52415-52448	9	0.735
CP034723_2	2.6\|942426\|34\|CP034723\|PILER-CR	942426-942459	34	NZ_CP035001	Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence	167098-167131	9	0.735
CP034723_2	2.8\|942551\|34\|CP034723\|PILER-CR	942551-942584	34	NZ_CP043057	Dolichospermum sp. UHCC 0315A plasmid pUHCC0315a, complete sequence	59651-59684	9	0.735
CP034723_2	2.17\|942367\|32\|CP034723\|CRISPRCasFinder,CRT	942367-942398	32	NZ_CP050089	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence	207066-207097	9	0.719
CP034723_2	2.17\|942367\|32\|CP034723\|CRISPRCasFinder,CRT	942367-942398	32	KC595516	Brevibacillus phage Emery, complete genome	27188-27219	9	0.719
CP034723_2	2.18\|942428\|32\|CP034723\|CRISPRCasFinder,CRT	942428-942459	32	DQ674738	Aeromonas phage phiO18P, complete genome	15707-15738	9	0.719
CP034723_2	2.18\|942428\|32\|CP034723\|CRISPRCasFinder,CRT	942428-942459	32	NZ_CP031166	Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence	380725-380756	9	0.719
CP034723_2	2.18\|942428\|32\|CP034723\|CRISPRCasFinder,CRT	942428-942459	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	153785-153816	9	0.719
CP034723_2	2.6\|942426\|34\|CP034723\|PILER-CR	942426-942459	34	DQ674738	Aeromonas phage phiO18P, complete genome	15705-15738	10	0.706
CP034723_2	2.25\|942858\|32\|CP034723\|CRISPRCasFinder,CRT	942858-942889	32	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	146919-146950	10	0.688
CP034723_2	2.18\|942428\|32\|CP034723\|CRISPRCasFinder,CRT	942428-942459	32	NZ_CP054036	Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence	234768-234799	11	0.656
CP034723_2	2.18\|942428\|32\|CP034723\|CRISPRCasFinder,CRT	942428-942459	32	NZ_CP022568	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence	299431-299462	11	0.656

1. spacer 2.18|942428|32|CP034723|CRISPRCasFinder,CRT matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 7, identity: 0.781

ccggcatcagcgccgatccgttcatagtgccc---	CRISPR spacer
tcggcaccagcgccgatccggtca---tgctcgaa	Protospacer
.*****.************* ***   ***.*

2. spacer 2.18|942428|32|CP034723|CRISPRCasFinder,CRT matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 7, identity: 0.781

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ccggcatcaccgccgatcctttcaccgccgcc	Protospacer
********* ********* ****. *.  **

3. spacer 2.18|942428|32|CP034723|CRISPRCasFinder,CRT matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 7, identity: 0.781

ccggcatcagcgccgatccgttcatagtgccc---	CRISPR spacer
tcggcaccagcgccgatccggtca---tgctcgaa	Protospacer
.*****.************* ***   ***.*

4. spacer 2.6|942426|34|CP034723|PILER-CR matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 8, identity: 0.765

cgccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
caccggcatcaccgccgatcctttcaccgccgcc	Protospacer
*.********* ********* ****. *.  **

5. spacer 2.17|942367|32|CP034723|CRISPRCasFinder,CRT matches to MH719082 (Escherichia phage vB_EcoM_IME392, complete genome) position: , mismatch: 8, identity: 0.75

gtattcagctcttgccgcaatatgccgctcaa	CRISPR spacer
gtatttaactcttgccgcaatatgaatagcag	Protospacer
*****.*.****************     **.

6. spacer 2.20|942553|32|CP034723|CRISPRCasFinder,CRT matches to NZ_CP043057 (Dolichospermum sp. UHCC 0315A plasmid pUHCC0315a, complete sequence) position: , mismatch: 8, identity: 0.75

aatatctataacggagccgttttcattgagcg	CRISPR spacer
accttctttaacggtgccgttttcattgtgta	Protospacer
* . *** ****** ************* *..

7. spacer 2.5|942365|34|CP034723|PILER-CR matches to NZ_CP050089 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence) position: , mismatch: 9, identity: 0.735

cggtattca----gctcttgccgcaatatgccgctcaa	CRISPR spacer
----gttgaaaatgctcttgccgcaataaaccgctcac	Protospacer
    .** *    *************** .*******

8. spacer 2.5|942365|34|CP034723|PILER-CR matches to MH719082 (Escherichia phage vB_EcoM_IME392, complete genome) position: , mismatch: 9, identity: 0.735

cggtattcagctcttgccgcaatatgccgctcaa	CRISPR spacer
ctgtatttaactcttgccgcaatatgaatagcag	Protospacer
* *****.*.****************     **.

9. spacer 2.6|942426|34|CP034723|PILER-CR matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 9, identity: 0.735

cgccggcatcagcgccgatccgttcatagtgccc---	CRISPR spacer
gatcggcaccagcgccgatccggtca---tgctcgaa	Protospacer
 ..*****.************* ***   ***.*

10. spacer 2.6|942426|34|CP034723|PILER-CR matches to NZ_CP042998 (Aquisphaera giovannonii strain OJF2 plasmid pOJF2_1, complete sequence) position: , mismatch: 9, identity: 0.735

cgccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
cgtccgcatcagcgccgatccgttgagcacgggc	Protospacer
**.* ******************* *  ..*  *

11. spacer 2.6|942426|34|CP034723|PILER-CR matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 9, identity: 0.735

cgccggcatcagcgccgatccgttcatagtgccc---	CRISPR spacer
gatcggcaccagcgccgatccggtca---tgctcgaa	Protospacer
 ..*****.************* ***   ***.*

12. spacer 2.8|942551|34|CP034723|PILER-CR matches to NZ_CP043057 (Dolichospermum sp. UHCC 0315A plasmid pUHCC0315a, complete sequence) position: , mismatch: 9, identity: 0.735

cgaatatctataacggagccgttttcattgagcg	CRISPR spacer
tgaccttctttaacggtgccgttttcattgtgta	Protospacer
.** . *** ****** ************* *..

13. spacer 2.17|942367|32|CP034723|CRISPRCasFinder,CRT matches to NZ_CP050089 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence) position: , mismatch: 9, identity: 0.719

gtattcagctcttgccgcaatatgccgctcaa	CRISPR spacer
tgaaaatgctcttgccgcaataaaccgctcac	Protospacer
  *    *************** .*******

14. spacer 2.17|942367|32|CP034723|CRISPRCasFinder,CRT matches to KC595516 (Brevibacillus phage Emery, complete genome) position: , mismatch: 9, identity: 0.719

gtattcagctcttgccgcaatatgccgctcaa	CRISPR spacer
gtatgcagctcttgcctcaatatctgccttct	Protospacer
**** *********** ****** .  **.

15. spacer 2.18|942428|32|CP034723|CRISPRCasFinder,CRT matches to DQ674738 (Aeromonas phage phiO18P, complete genome) position: , mismatch: 9, identity: 0.719

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ccggcatcagcgccgagcagttcagcaaactg	Protospacer
**************** * *****  . .*.

16. spacer 2.18|942428|32|CP034723|CRISPRCasFinder,CRT matches to NZ_CP031166 (Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence) position: , mismatch: 9, identity: 0.719

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
gcggcatcagcgccgaccggttcaccgtcagg	Protospacer
 ***************.* *****. **

17. spacer 2.18|942428|32|CP034723|CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.719

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ccggcatgagcgccgatcagttcgacgccctg	Protospacer
******* ********** ****.  *. *.

18. spacer 2.6|942426|34|CP034723|PILER-CR matches to DQ674738 (Aeromonas phage phiO18P, complete genome) position: , mismatch: 10, identity: 0.706

cgccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ggccggcatcagcgccgagcagttcagcaaactg	Protospacer
 ***************** * *****  . .*.

19. spacer 2.25|942858|32|CP034723|CRISPRCasFinder,CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cgttcatcggcagcgtcacgcaatatgaagat	CRISPR spacer
acatcatcggcatcgtcacgccatatccggca	Protospacer
   ********* ******** ****  .*

20. spacer 2.18|942428|32|CP034723|CRISPRCasFinder,CRT matches to NZ_CP054036 (Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence) position: , mismatch: 11, identity: 0.656

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ttccgatcagcgccgatccgctcctagtctat	Protospacer
..   ***************.** **** . .

21. spacer 2.18|942428|32|CP034723|CRISPRCasFinder,CRT matches to NZ_CP022568 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence) position: , mismatch: 11, identity: 0.656

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ttccgatcagcgccgatccgctcctagtctat	Protospacer
..   ***************.** **** . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1144851 : 1199808

Enterobacteria_phage(24.0%)

holin,tRNA,terminase,lysis,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZT67374.1\|1144851_1145619_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AZT67375.1\|1145659_1146007_+	50S ribosomal protein L19	NA	NA	NA	NA
AZT67376.1\|1146163_1147384_-	diguanylate cyclase	A0A2K8I9Y5	Pseudomonas_phage	5.8e-08	36.2
AZT67377.1\|1147376_1147895_-	YfiR family protein	NA	NA	NA	NA
AZT67378.1\|1148334_1149405_+	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	2.4e-90	51.8
AZT67379.1\|1149414_1150536_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
AZT67380.1\|1150593_1151502_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
AZT67381.1\|1151462_1152623_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
AZT70385.1\|1152722_1152770_-	hypothetical protein	NA	NA	NA	NA
AZT67382.1\|1152873_1153212_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
AZT67383.1\|1153482_1154220_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AZT67384.1\|1154351_1155332_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
AZT67385.1\|1155328_1156060_+	polyphenol oxidase	NA	NA	NA	NA
AZT67386.1\|1156189_1158763_+	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.5
AZT67387.1\|1164514_1164751_+	hypothetical protein	NA	NA	NA	NA
AZT67388.1\|1164760_1165216_+	DUF4385 domain-containing protein	E3SMI8	Prochlorococcus_phage	3.0e-34	50.0
AZT67389.1\|1165319_1166621_+	MFS transporter	Q6JIH2	Burkholderia_virus	1.5e-43	30.4
AZT70386.1\|1166971_1168327_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
AZT67390.1\|1168441_1171102_-	protein lysine acetyltransferase	NA	NA	NA	NA
AZT67391.1\|1171155_1171836_-	DTW domain-containing protein	NA	NA	NA	NA
AZT67392.1\|1171908_1172328_-	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	1.2e-16	40.6
AZT67393.1\|1172531_1173569_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
AZT67394.1\|1173684_1174374_-	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	4.6e-55	49.5
AZT67395.1\|1174692_1175076_+	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	6.1e-33	74.0
AZT67396.1\|1175137_1175725_-	cysteine/O-acetylserine transporter	NA	NA	NA	NA
AZT67397.1\|1175827_1176727_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZT67398.1\|1176744_1178079_-	ATP-dependent RNA helicase SrmB	A0A1B1IS59	uncultured_Mediterranean_phage	1.6e-43	29.7
AZT67399.1\|1178209_1178947_+\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase	NA	NA	NA	NA
AZT67400.1\|1178931_1180554_-	L-aspartate oxidase	NA	NA	NA	NA
AZT67401.1\|1180638_1180818_+	hypothetical protein	NA	NA	NA	NA
AZT67402.1\|1180817_1180982_+	rpoE leader peptide RseD	NA	NA	NA	NA
AZT67403.1\|1180978_1181554_+	RNA polymerase sigma factor RpoE	NA	NA	NA	NA
AZT67404.1\|1181585_1182236_+	anti-sigma-E factor RseA	NA	NA	NA	NA
AZT67405.1\|1182235_1183192_+	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
AZT70387.1\|1183696_1183813_+	transcriptional regulator	NA	NA	NA	NA
AZT67406.1\|1184164_1185394_+	DUF4102 domain-containing protein	H6WRW7	Salmonella_phage	2.9e-233	94.4
AZT67407.1\|1185371_1185656_-	excisionase Xis	H6WRW8	Salmonella_phage	3.1e-42	86.2
AZT67408.1\|1185696_1185936_-	DUF4060 family protein	S4TR31	Salmonella_phage	2.0e-37	100.0
AZT67409.1\|1186653_1186977_+	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	5.7e-32	66.4
AZT67410.1\|1186973_1187168_+	hypothetical protein	S4TNP0	Salmonella_phage	6.1e-13	61.5
AZT70388.1\|1187164_1187446_+	DUF1364 family protein	K7P7Q1	Enterobacteria_phage	8.2e-35	78.0
AZT67411.1\|1187442_1187997_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	2.8e-63	64.6
AZT67412.1\|1187942_1188134_-	hypothetical protein	NA	NA	NA	NA
AZT67413.1\|1188981_1189407_+	subtilase cytotoxin subunit B-like protein	NA	NA	NA	NA
AZT67414.1\|1189465_1189639_+	hypothetical protein	Q9MBZ5	Enterobacteria_phage	5.8e-07	57.9
AZT67415.1\|1189844_1190759_+	hypothetical protein	NA	NA	NA	NA
AZT67416.1\|1191453_1191636_-	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
AZT67417.1\|1191828_1192218_+	hypothetical protein	K7PHB9	Enterobacterial_phage	1.4e-40	71.8
AZT67418.1\|1192204_1192486_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	3.7e-35	78.5
AZT67419.1\|1192485_1193100_+	glycoside hydrolase family 19 protein	Q8HA86	Salmonella_phage	9.7e-97	83.8
AZT67420.1\|1193096_1193576_+\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	5.3e-50	73.8
AZT67421.1\|1193815_1194217_-	inhibitor of g-type lysozyme	NA	NA	NA	NA
AZT67422.1\|1194502_1195048_+\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.9e-56	79.9
AZT67423.1\|1195019_1196951_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	8.2e-259	65.6
AZT67424.1\|1196934_1197138_+\|tail	phage tail protein	K7PM10	Enterobacteria_phage	1.9e-17	73.8
AZT67425.1\|1199388_1199808_+\|tail	phage tail protein	Q9G0F3	Phage_Gifsy-1	8.5e-52	100.0

DBSCAN-SWA_2

1411720 : 1442975

Salmonella_virus(23.08%)

protease,transposase,capsid,integrase

attL 1424452:1424511|attR 1442981:1444222

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZT67585.1\|1411720_1412179_+\|transposase	IS200/IS605-like element IS200F family transposase	I4AZI8	Saccharomonospora_phage	1.0e-13	31.5
AZT67586.1\|1412878_1414117_+	alanine transaminase	NA	NA	NA	NA
AZT70393.1\|1414166_1414238_-	membrane protein YpdK	NA	NA	NA	NA
AZT67587.1\|1414640_1415561_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	1.1e-75	53.5
AZT67588.1\|1416082_1416325_+	DUF2545 family protein	NA	NA	NA	NA
AZT67589.1\|1416598_1417990_-	phosphoglycerate transporter PgtP	NA	NA	NA	NA
AZT70395.1\|1418163_1418382_+	hypothetical protein	NA	NA	NA	NA
AZT70394.1\|1418425_1419619_+	phosphoglycerate transport regulator PgtC	NA	NA	NA	NA
AZT67590.1\|1419615_1421622_+	two-component system sensor histidine kinase PgtB	NA	NA	NA	NA
AZT70396.1\|1421611_1422859_+	two-component system response regulator PgtA	NA	NA	NA	NA
AZT67591.1\|1423126_1424065_+\|protease	omptin family outer membrane protease PgtE	NA	NA	NA	NA
AZT70397.1\|1424250_1424454_+	hypothetical protein	A0A1R3Y5S2	Salmonella_virus	6.2e-08	68.6
1424452:1424511	attL	NA	NA	NA	NA
AZT67592.1\|1424516_1425666_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	6.8e-51	42.3
AZT67593.1\|1425731_1425875_+	hypothetical protein	A0A1R3Y5S2	Salmonella_virus	1.7e-12	82.9
AZT67594.1\|1426864_1428787_-	acyltransferase	A0A1R3Y5Q6	Salmonella_virus	5.6e-300	77.3
AZT67595.1\|1428804_1429059_-	glycosyltransferase	A8CG95	Salmonella_phage	3.1e-25	79.5
AZT67596.1\|1429027_1429417_-	GtrA family protein	A0A192Y6N5	Salmonella_phage	1.1e-50	85.6
AZT67597.1\|1430702_1430963_-	Txe/YoeB family addiction module toxin	NA	NA	NA	NA
AZT67598.1\|1430962_1431208_-	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
AZT67599.1\|1431545_1432124_-	hypothetical protein	NA	NA	NA	NA
AZT67600.1\|1432232_1432493_+	transcriptional regulator	F1BUM8	Cronobacter_phage	9.3e-25	66.3
AZT67601.1\|1432504_1432855_-	hypothetical protein	NA	NA	NA	NA
AZT67602.1\|1436188_1436458_-	Derepression protein	Q7M2A0	Enterobacteria_phage	6.7e-10	50.8
AZT67603.1\|1436546_1436954_-	hypothetical protein	NA	NA	NA	NA
AZT67604.1\|1436946_1437369_-	hypothetical protein	NA	NA	NA	NA
AZT67605.1\|1437361_1437565_-	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
AZT67606.1\|1437757_1437943_+	hypothetical protein	NA	NA	NA	NA
AZT67607.1\|1438158_1439166_-\|capsid	major capsid protein	F1BUM2	Cronobacter_phage	8.0e-64	45.4
AZT67608.1\|1439175_1439934_-	hypothetical protein	NA	NA	NA	NA
AZT67609.1\|1440083_1440302_-	AlpA family transcriptional regulator	NA	NA	NA	NA
AZT67610.1\|1440775_1441798_-\|integrase	integrase	B7SYF8	Stenotrophomonas_phage	2.4e-52	38.1
AZT67611.1\|1441824_1442975_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	6.8e-51	42.3
1442981:1444222	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1682922 : 1692093

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZT67809.1\|1682922_1683870_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-23	31.2
AZT67810.1\|1683853_1684585_+	ABC transporter permease	NA	NA	NA	NA
AZT67811.1\|1684565_1684673_-	protein YohO	NA	NA	NA	NA
AZT67812.1\|1684732_1685464_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
AZT67813.1\|1685686_1687372_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
AZT67814.1\|1687368_1688088_+	two-component system response regulator YehT	NA	NA	NA	NA
AZT67815.1\|1688134_1688602_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
AZT67816.1\|1688658_1689189_-	DUF1307 domain-containing protein	NA	NA	NA	NA
AZT67817.1\|1689360_1689819_-	DUF1307 domain-containing protein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
AZT67818.1\|1690059_1692093_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_4

1759486 : 1769990

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZT67866.1\|1759486_1760890_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	2.3e-21	26.5
AZT67867.1\|1761067_1761961_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	4.8e-44	42.2
AZT67868.1\|1762336_1763422_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.3e-101	53.6
AZT67869.1\|1763421_1764321_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.4e-30	36.3
AZT67870.1\|1764368_1765226_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	5.0e-107	65.4
AZT67871.1\|1765246_1765798_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.3e-52	58.0
AZT67872.1\|1765803_1766796_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
AZT67873.1\|1766792_1767566_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
AZT67874.1\|1767570_1768650_+	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	1.7e-16	24.5
AZT67875.1\|1768676_1769990_+	lipopolysaccharide biosynthesis protein RfbH	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1

DBSCAN-SWA_5

1852807 : 1876103

Salmonella_phage(22.22%)

plate,integrase,transposase,tail

attL 1854384:1854443|attR 1872725:1872786

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZT67946.1\|1852807_1853098_-	DUF4102 domain-containing protein	H2BDA3	Pseudomonas_phage	1.2e-07	49.1
AZT67947.1\|1853469_1854267_-	DgsA anti-repressor MtfA	NA	NA	NA	NA
1854384:1854443	attL	NA	NA	NA	NA
AZT67948.1\|1854511_1855369_-\|integrase	integrase	A0A192Y7M7	Salmonella_phage	2.2e-91	61.6
AZT67949.1\|1855362_1855911_+	hypothetical protein	A5LH27	Enterobacteria_phage	3.6e-26	70.1
AZT67950.1\|1855903_1856521_+\|plate	phage baseplate assembly protein V	Q9JML8	Wolbachia_phage	3.9e-13	36.2
AZT67951.1\|1856559_1858029_+\|tail	phage tail protein	R9TMQ0	Vibrio_phage	3.0e-75	37.5
AZT67952.1\|1858025_1858532_+\|tail	phage tail protein	NA	NA	NA	NA
AZT67953.1\|1858590_1858890_+\|tail	phage tail assembly protein	Q75QK8	Wolbachia_phage	1.9e-05	31.6
AZT67954.1\|1860552_1860768_+\|tail	phage tail protein	R9TR63	Vibrio_phage	9.7e-12	51.4
AZT67955.1\|1860769_1861888_+	late control protein D	R9TNM7	Vibrio_phage	7.3e-34	32.8
AZT67956.1\|1861927_1862281_+\|plate	baseplate assembly protein	R9TRM1	Vibrio_phage	6.5e-21	54.1
AZT67957.1\|1862264_1863185_+\|plate	baseplate assembly protein	A0A088FQL4	Escherichia_phage	1.7e-65	49.2
AZT67958.1\|1863174_1863738_+\|tail	phage tail protein I	A0A193GYD1	Enterobacter_phage	2.0e-27	39.7
AZT67959.1\|1863730_1865359_+\|tail	phage tail protein	A0A0M3ULH6	Salmonella_phage	4.2e-38	39.3
AZT67960.1\|1865361_1865877_+\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	8.1e-12	31.3
AZT67961.1\|1865971_1866265_+	hypothetical protein	NA	NA	NA	NA
AZT67962.1\|1866266_1866707_+\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	1.5e-27	45.8
AZT67963.1\|1866766_1868596_-	acyltransferase	C6ZR20	Salmonella_phage	1.5e-60	29.3
AZT67964.1\|1868934_1869177_-	DinI family protein	Q6UAW0	Klebsiella_phage	7.6e-29	75.3
AZT67965.1\|1869450_1870600_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	6.8e-51	42.3
AZT67966.1\|1871479_1871668_+	hypothetical protein	NA	NA	NA	NA
AZT67967.1\|1871892_1872564_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	4.8e-81	60.9
AZT67968.1\|1872598_1872787_-	hypothetical protein	NA	NA	NA	NA
1872725:1872786	attR	NA	NA	NA	NA
AZT67969.1\|1872821_1873004_+	hypothetical protein	NA	NA	NA	NA
AZT67970.1\|1873396_1873774_+	hypothetical protein	NA	NA	NA	NA
AZT67971.1\|1873800_1874619_+	hypothetical protein	NA	NA	NA	NA
AZT70414.1\|1875080_1876103_+\|transposase	IS110-like element ISSaen1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

1940271 : 2038161

106

Enterobacteria_phage(25.58%)

transposase,integrase,tRNA,tail

attL 1975725:1975741|attR 2021705:2021721

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZT68037.1\|1940271_1941526_+\|transposase	IS3-like element ISSen1 family transposase	Q6H9S3	Enterobacteria_phage	2.2e-18	34.5
AZT68038.1\|1944075_1944435_+	purine nucleoside phosphoramidase	NA	NA	NA	NA
AZT68039.1\|1944437_1944812_+	DUF1425 domain-containing protein	NA	NA	NA	NA
AZT68040.1\|1944825_1945464_+	penicillin-binding protein activator LpoB	NA	NA	NA	NA
AZT68041.1\|1945444_1946269_+	thiamine kinase	NA	NA	NA	NA
AZT68042.1\|1946279_1947305_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA
AZT68043.1\|1947329_1947872_+	alpha/beta hydrolase	NA	NA	NA	NA
AZT68044.1\|1948126_1949431_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
AZT68045.1\|1949609_1950149_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
AZT68046.1\|1950223_1950859_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZT68047.1\|1951100_1951358_+	DUF1471 domain-containing protein	A0A1B2IFR9	Erwinia_phage	2.1e-05	37.1
AZT68048.1\|1951454_1952420_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
AZT68049.1\|1956239_1957550_+	lipoprotein-releasing ABC transporter permease subunit LolC	NA	NA	NA	NA
AZT68050.1\|1957542_1958244_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	G9BWD6	Planktothrix_phage	2.4e-35	40.7
AZT68051.1\|1958243_1959488_+	lipoprotein-releasing ABC transporter permease subunit LolE	NA	NA	NA	NA
AZT68052.1\|1959516_1960428_+	N-acetylglucosamine kinase	NA	NA	NA	NA
AZT68053.1\|1960446_1961268_+	NAD-dependent protein deacylase	A0A2I7S9Y2	Vibrio_phage	1.0e-21	33.5
AZT68054.1\|1961349_1962387_-	spermidine/putrescine ABC transporter substrate-binding protein PotD	NA	NA	NA	NA
AZT68055.1\|1962419_1963199_-	spermidine/putrescine ABC transporter permease PotC	NA	NA	NA	NA
AZT68056.1\|1963514_1964525_-	type III secretion system effector SifA	NA	NA	NA	NA
AZT68057.1\|1964853_1965717_-	spermidine/putrescine ABC transporter permease	Q6GZ02	Mycoplasma_phage	2.0e-10	26.2
AZT68058.1\|1965700_1966837_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	G3M9Y6	Bacillus_virus	2.1e-28	34.0
AZT68059.1\|1967087_1968317_+	peptidase T	NA	NA	NA	NA
AZT68060.1\|1968320_1969655_+	hypothetical protein	NA	NA	NA	NA
AZT68061.1\|1969694_1970816_-	cupin domain-containing protein	NA	NA	NA	NA
AZT68062.1\|1970896_1972360_-	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
AZT68063.1\|1972359_1973034_-	two-component system response regulator PhoP	NA	NA	NA	NA
AZT68064.1\|1973157_1974528_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.1e-108	45.3
AZT68065.1\|1974531_1975173_-	lysogenization regulator HflD	NA	NA	NA	NA
AZT68066.1\|1975259_1976366_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
1975725:1975741	attL	NA	NA	NA	NA
AZT68067.1\|1976419_1976881_-	NUDIX hydrolase	NA	NA	NA	NA
AZT68068.1\|1976892_1977222_-	DUF1311 domain-containing protein	NA	NA	NA	NA
AZT68069.1\|1977218_1977884_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
AZT68070.1\|1978055_1979306_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	6.7e-20	92.6
AZT68071.1\|1979420_1980563_-\|integrase	integrase	O21929	Phage_21	8.2e-174	80.3
AZT68072.1\|1980552_1980789_-	excisionase	NA	NA	NA	NA
AZT68073.1\|1980838_1981342_-	Eaa protein	A0A075B8H2	Enterobacteria_phage	6.0e-36	92.3
AZT68074.1\|1981662_1981983_-	hypothetical protein	A0A222YY67	Escherichia_phage	1.8e-33	59.2
AZT68075.1\|1982018_1982849_-	recombination protein RecT	A0A1P8DTF2	Proteus_phage	1.3e-104	72.0
AZT68076.1\|1983005_1983311_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	7.3e-29	59.2
AZT68077.1\|1983400_1983925_+	Ail/OmpX	A0A1B0VBR9	Salmonella_phage	1.8e-19	35.3
AZT68078.1\|1984014_1984548_-	superoxide dismutase [Cu-Zn]	Q9MC02	Salmonella_phage	1.8e-46	54.0
AZT68079.1\|1985447_1985786_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.3e-31	62.4
AZT68080.1\|1985782_1986178_-\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	5.0e-30	56.5
AZT68081.1\|1987777_1988128_-	DNA breaking-rejoining protein	S4TSN6	Salmonella_phage	5.4e-60	95.7
AZT68082.1\|1988149_1988308_-	hypothetical protein	H6WRX3	Salmonella_phage	9.0e-23	98.1
AZT68083.1\|1988706_1988913_+	hypothetical protein	K7P7I0	Enterobacteria_phage	9.6e-17	69.1
AZT68084.1\|1988948_1989776_-	DUF3037 domain-containing protein	NA	NA	NA	NA
AZT68085.1\|1989772_1990522_-	hypothetical protein	NA	NA	NA	NA
AZT68086.1\|1990672_1991140_-	helix-turn-helix domain-containing protein	K7PHG0	Enterobacteria_phage	3.9e-66	83.9
AZT68087.1\|1991153_1991381_+	Rha family transcriptional regulator	K7PKS2	Enterobacteria_phage	1.5e-34	95.9
AZT70418.1\|1991346_1991721_+	hypothetical protein	S4TTD7	Salmonella_phage	3.3e-63	98.4
AZT68088.1\|1992237_1993492_+\|transposase	IS3-like element ISSen1 family transposase	Q6H9S3	Enterobacteria_phage	2.2e-18	34.5
AZT68089.1\|1993516_1993882_+	hypothetical protein	H6WRX7	Salmonella_phage	2.3e-37	54.3
AZT68090.1\|1993878_1994148_+\|integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	1.5e-17	53.5
AZT68091.1\|1995101_1995902_+	hypothetical protein	NA	NA	NA	NA
AZT68092.1\|1996549_1997320_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
AZT68093.1\|1997755_1997941_+	hypothetical protein	NA	NA	NA	NA
AZT68094.1\|1998031_1998607_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.5e-91	86.2
AZT68095.1\|2000059_2001691_+\|tail	phage tail protein	A0A1B0VFW4	Salmonella_phage	9.7e-152	65.5
AZT68096.1\|2001705_2002224_+\|tail	phage tail protein	A0A0U2QV64	Escherichia_phage	2.5e-45	51.4
AZT70419.1\|2002861_2003194_-\|tail	tail assembly chaperone	A0A1B0VCD0	Salmonella_phage	1.7e-18	66.2
AZT68097.1\|2003339_2005346_+	E3 ubiquitin--protein ligase	Q9MBL9	Phage_Gifsy-2	1.5e-61	79.6
AZT68098.1\|2005656_2006328_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.8e-80	61.3
AZT70420.1\|2006581_2006794_+	isocitrate dehydrogenase	Q77Z09	Phage_21	1.5e-20	92.6
AZT68099.1\|2007240_2008365_+	DUF3626 domain-containing protein	NA	NA	NA	NA
AZT68100.1\|2009413_2009827_+	subtilase cytotoxin subunit B	A0A0U2KD34	Escherichia_phage	3.2e-19	38.6
AZT68101.1\|2009843_2010572_+	pertussis-like toxin subunit ArtA	A0A0U2KD26	Escherichia_phage	1.0e-60	52.0
AZT68102.1\|2010763_2011306_+	hypothetical protein	A0A0U2S643	Escherichia_phage	2.3e-70	66.5
AZT68103.1\|2011454_2011832_-	DUF1353 domain-containing protein	I1TQ41	Pseudomonas_phage	2.2e-14	38.4
AZT70421.1\|2011904_2012723_-	cytolethal distending toxin subunit B family protein	A5LH53	Enterobacteria_phage	1.9e-63	50.4
AZT68104.1\|2013596_2013836_-	virulence protein MsgA	K7P6H1	Enterobacteria_phage	8.5e-33	88.6
AZT68105.1\|2014016_2014538_-	lipoprotein EnvE	NA	NA	NA	NA
AZT68106.1\|2014953_2015166_-	cold shock-like protein CspF	NA	NA	NA	NA
AZT68107.1\|2015297_2015561_-	virulence factor	NA	NA	NA	NA
AZT68108.1\|2015609_2015801_+	hypothetical protein	NA	NA	NA	NA
AZT68109.1\|2016368_2016926_+	virulence membrane protein PagC	Q9LA63	Enterobacterial_phage	2.2e-15	33.0
AZT68110.1\|2017922_2018123_+	hypothetical protein	NA	NA	NA	NA
AZT68111.1\|2018162_2018507_-	c-type lysozyme inhibitor	NA	NA	NA	NA
AZT68112.1\|2018884_2019010_+	hypothetical protein	NA	NA	NA	NA
AZT68113.1\|2019209_2019434_+	hypothetical protein	NA	NA	NA	NA
AZT68114.1\|2019631_2020102_+	Hsp20 family protein	NA	NA	NA	NA
AZT68115.1\|2020210_2020399_-	hypothetical protein	NA	NA	NA	NA
AZT68116.1\|2020440_2021484_+	hypothetical protein	NA	NA	NA	NA
AZT68117.1\|2021566_2022097_-	cytochrome b	A0A0U2QLA7	Escherichia_phage	2.8e-36	70.5
2021705:2021721	attR	NA	NA	NA	NA
AZT68118.1\|2022244_2022559_-	hypothetical protein	NA	NA	NA	NA
AZT68119.1\|2023240_2024875_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZT70422.1\|2024874_2025849_+	ABC transporter permease	NA	NA	NA	NA
AZT68120.1\|2025838_2026651_+	ABC transporter permease	NA	NA	NA	NA
AZT68121.1\|2026644_2027442_+	ATP-binding cassette domain-containing protein	A0A2R8FG22	Brazilian_cedratvirus	2.8e-11	31.2
AZT68122.1\|2027435_2028026_+	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
AZT68123.1\|2028107_2029241_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
AZT68124.1\|2029434_2029761_+	four-helix bundle copper-binding protein	NA	NA	NA	NA
AZT68125.1\|2029954_2030605_+	metal-binding protein ZinT	NA	NA	NA	NA
AZT70423.1\|2031645_2032239_+	LuxR family transcriptional regulator	NA	NA	NA	NA
AZT68126.1\|2032307_2033156_+	MerR family transcriptional regulator	NA	NA	NA	NA
AZT68127.1\|2033410_2033659_-	histidine kinase	NA	NA	NA	NA
AZT68128.1\|2033974_2034520_+	chorismate mutase	NA	NA	NA	NA
AZT68129.1\|2034716_2035355_+	leucine efflux protein LeuE	NA	NA	NA	NA
AZT68130.1\|2035371_2035557_-	hypothetical protein	NA	NA	NA	NA
AZT68131.1\|2035527_2035890_+	DUF1971 domain-containing protein	NA	NA	NA	NA
AZT68132.1\|2035892_2036075_+	DUF1869 domain-containing protein	NA	NA	NA	NA
AZT68133.1\|2036304_2036946_+	hypothetical protein	NA	NA	NA	NA
AZT68134.1\|2037066_2037252_+	hypothetical protein	NA	NA	NA	NA
AZT68135.1\|2037259_2037508_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
AZT68136.1\|2037702_2038161_+\|transposase	IS200/IS605-like element IS200F family transposase	I4AZI8	Saccharomonospora_phage	1.0e-13	31.5

DBSCAN-SWA_7

2853123 : 2986567

107

Salmonella_phage(16.67%)

transposase,protease,tRNA,integrase,tail

attL 2931855:2931871|attR 2981134:2981150

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZT68871.1\|2853123_2853804_+\|protease	type III secretion system effector protease PipA	Q9MBM0	Phage_Gifsy-2	2.3e-83	72.0
AZT68872.1\|2854422_2855082_+\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	2.7e-44	52.4
AZT68873.1\|2855168_2855498_+	sulfurtransferase TusE	NA	NA	NA	NA
AZT68874.1\|2855494_2855776_-	acylphosphatase	NA	NA	NA	NA
AZT68875.1\|2856395_2857546_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	6.8e-51	42.3
AZT68876.1\|2857729_2858278_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
AZT68877.1\|2858492_2859704_+	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
AZT68878.1\|2859761_2860079_+	heat-shock protein HspQ	NA	NA	NA	NA
AZT68879.1\|2860123_2860540_-	CoA-binding protein	NA	NA	NA	NA
AZT68880.1\|2860710_2861373_+	DUF2057 family protein	NA	NA	NA	NA
AZT68881.1\|2861467_2861926_+	methylglyoxal synthase	NA	NA	NA	NA
AZT68882.1\|2861961_2864016_-	DNA helicase IV	A7KV33	Bacillus_phage	6.5e-20	27.6
AZT68883.1\|2864139_2864586_+	YccF domain-containing protein	NA	NA	NA	NA
AZT68884.1\|2866743_2867349_-	TfoX family DNA transformation protein	NA	NA	NA	NA
AZT68885.1\|2867565_2868075_+	cell division inhibitor SulA	NA	NA	NA	NA
AZT68886.1\|2868431_2869478_+	porin OmpA	NA	NA	NA	NA
AZT68887.1\|2869549_2870002_-	macrodomain Ter protein MatP	NA	NA	NA	NA
AZT68888.1\|2870187_2871948_+\|protease	Lon protease family protein	NA	NA	NA	NA
AZT68889.1\|2872016_2872535_+	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA
AZT68890.1\|2872634_2872802_-	ribosome modulation factor	NA	NA	NA	NA
AZT68891.1\|2873057_2873621_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
AZT68892.1\|2873617_2875258_-	intermembrane transport protein PqiB	NA	NA	NA	NA
AZT68893.1\|2875262_2876516_-	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA
AZT68894.1\|2876530_2878438_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	2.4e-53	29.8
AZT68895.1\|2878450_2880559_-	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA
AZT68896.1\|2880657_2881767_+	MOSC domain-containing protein	NA	NA	NA	NA
AZT68897.1\|2881763_2882306_-	cell division protein ZapC	NA	NA	NA	NA
AZT68898.1\|2883688_2886301_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	4.8e-20	22.6
AZT70452.1\|2886727_2886919_+	DinI family protein	S4TNM0	Salmonella_phage	6.2e-26	95.2
AZT68899.1\|2887189_2887876_+	virulence protein	NA	NA	NA	NA
AZT68900.1\|2887860_2888160_+	hypothetical protein	NA	NA	NA	NA
AZT68901.1\|2888228_2888855_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.4e-66	63.2
AZT70453.1\|2889502_2890270_-	pathogenicity island 2 effector protein SseI	Q9MBL9	Phage_Gifsy-2	1.0e-148	99.2
AZT68902.1\|2890945_2891527_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.7e-95	89.5
AZT68903.1\|2891526_2893965_-\|tail	phage tail protein	A0A0K2FIZ6	Escherichia_phage	3.7e-91	63.4
AZT68904.1\|2894018_2894261_-	hypothetical protein	NA	NA	NA	NA
AZT70454.1\|2894299_2894506_-	host specificity protein	NA	NA	NA	NA
AZT68905.1\|2894559_2895054_-	hypothetical protein	NA	NA	NA	NA
AZT68906.1\|2895040_2895295_-	XRE family transcriptional regulator	K7PKH4	Enterobacteria_phage	5.3e-17	60.9
AZT68907.1\|2895393_2895792_+	helix-turn-helix domain-containing protein	K7PH19	Enterobacteria_phage	1.2e-18	56.0
AZT68908.1\|2896088_2896244_+	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	8.0e-08	55.3
AZT68909.1\|2897179_2897464_+	hypothetical protein	K7PGY4	Enterobacteria_phage	1.7e-08	53.2
AZT68910.1\|2897538_2897859_+	hypothetical protein	NA	NA	NA	NA
AZT68911.1\|2897855_2899111_-\|transposase	IS3-like element ISSen1 family transposase	Q6H9S3	Enterobacteria_phage	2.2e-18	34.5
AZT68912.1\|2899326_2902506_+	DNA breaking-rejoining protein	S4TNL0	Salmonella_phage	0.0e+00	69.0
AZT68913.1\|2902468_2903626_+	enterohemolysin	S4TTE8	Salmonella_phage	1.6e-217	100.0
AZT68914.1\|2903668_2903908_+	DUF4060 family protein	S4TR31	Salmonella_phage	2.0e-37	100.0
AZT68915.1\|2903948_2904197_+	excisionase	S4TND0	Salmonella_phage	4.7e-42	100.0
AZT68916.1\|2904241_2905534_+	DUF3596 domain-containing protein	S4TSP2	Salmonella_phage	3.4e-253	100.0
AZT68917.1\|2905728_2906931_+	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
AZT68918.1\|2908690_2909905_-	diaminopropionate ammonia-lyase	NA	NA	NA	NA
AZT68919.1\|2909991_2910225_+	hypothetical protein	NA	NA	NA	NA
AZT68920.1\|2910221_2910683_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AZT68921.1\|2910883_2912284_+\|tRNA	asparagine--tRNA ligase	A0A167RLM0	Powai_lake_megavirus	4.5e-81	35.1
AZT68922.1\|2912889_2913981_+	porin OmpF	Q1MVN1	Enterobacteria_phage	1.7e-99	51.7
AZT68923.1\|2914165_2915356_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
AZT68924.1\|2915417_2916065_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
AZT68925.1\|2916092_2916641_-	DUF882 domain-containing protein	A0A0K1LKR7	Rhodobacter_phage	1.2e-05	33.7
AZT68926.1\|2918985_2919186_-	hypothetical protein	NA	NA	NA	NA
AZT68927.1\|2919091_2923558_-	chromosome partition protein MukB	NA	NA	NA	NA
AZT68928.1\|2923557_2924262_-	chromosome partition protein MukE	NA	NA	NA	NA
AZT68929.1\|2924242_2925565_-	chromosome partition protein MukF	NA	NA	NA	NA
AZT68930.1\|2925557_2926361_-\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
AZT68931.1\|2926496_2927273_+	envelope biogenesis factor ElyC	NA	NA	NA	NA
AZT68932.1\|2928355_2929102_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
AZT68933.1\|2929098_2929281_-	protein YcaR	NA	NA	NA	NA
AZT68934.1\|2929332_2930565_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
2931855:2931871	attL	NA	NA	NA	NA
AZT68935.1\|2933365_2935630_-	ComEC family protein	Q332C0	Clostridium_botulinum_C_phage	3.3e-09	22.1
AZT68936.1\|2935806_2937062_-\|transposase	IS3-like element ISSen1 family transposase	Q6H9S3	Enterobacteria_phage	2.2e-18	34.5
AZT68937.1\|2937174_2937459_-	integration host factor subunit beta	A7KV42	Bacillus_phage	4.1e-10	40.2
AZT68938.1\|2937614_2939288_-	30S ribosomal protein S1	NA	NA	NA	NA
AZT68939.1\|2939401_2940085_-	(d)CMP kinase	NA	NA	NA	NA
AZT68940.1\|2940257_2941019_-\|protease	metalloprotease	NA	NA	NA	NA
AZT68941.1\|2941161_2942445_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
AZT68942.1\|2943788_2944481_-	DUF421 domain-containing protein	NA	NA	NA	NA
AZT68943.1\|2944617_2946378_+	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA
AZT68944.1\|2946782_2947640_+	formate transporter FocA	NA	NA	NA	NA
AZT68945.1\|2947699_2949982_+	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.1e-161	42.0
AZT68946.1\|2950057_2951017_-	SPI-2 type III secretion system effector SopD2	NA	NA	NA	NA
AZT68947.1\|2951147_2951474_+	cytoplasmic protein	NA	NA	NA	NA
AZT68948.1\|2951565_2952390_+	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	2.8e-22	26.5
AZT68949.1\|2952682_2954104_-	amino acid permease	NA	NA	NA	NA
AZT68950.1\|2954321_2955470_-	MFS transporter	NA	NA	NA	NA
AZT68951.1\|2955817_2956681_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
AZT68952.1\|2956682_2957300_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	4.3e-76	59.6
AZT68953.1\|2957310_2959755_-	dimethylsulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	5.4e-223	50.5
AZT68954.1\|2961542_2962886_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	1.6e-80	40.9
AZT70455.1\|2962895_2963507_-	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
AZT68955.1\|2963649_2967663_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	2.9e-88	49.5
AZT68956.1\|2967797_2968292_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
AZT68957.1\|2968838_2969807_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	6.5e-63	45.5
AZT68958.1\|2969921_2971688_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	1.6e-22	25.3
AZT68959.1\|2971688_2973410_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	6.4e-13	23.5
AZT68960.1\|2973454_2974159_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AZT68961.1\|2974159_2974543_+	hypothetical protein	NA	NA	NA	NA
AZT68962.1\|2974470_2974689_+	translation initiation factor IF-1	NA	NA	NA	NA
AZT68963.1\|2974779_2975691_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZT68964.1\|2975799_2976660_+	pirin family protein	NA	NA	NA	NA
AZT68965.1\|2976679_2977357_+	hydrolase	NA	NA	NA	NA
AZT68966.1\|2977693_2978948_+\|transposase	IS3-like element ISSen1 family transposase	Q6H9S3	Enterobacteria_phage	2.2e-18	34.5
AZT68967.1\|2979256_2979634_+\|integrase	integrase	NA	NA	NA	NA
AZT68968.1\|2979795_2979993_+	hypothetical protein	NA	NA	NA	NA
AZT68969.1\|2980203_2982480_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
2981134:2981150	attR	NA	NA	NA	NA
AZT68970.1\|2982510_2982831_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
AZT68971.1\|2983154_2983376_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
AZT68972.1\|2983505_2985452_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	9.1e-40	42.3
AZT68973.1\|2985448_2986567_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.4e-08	38.9

DBSCAN-SWA_8

3609698 : 3637832

Bradyrhizobium_phage(16.67%)

plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZT69496.1\|3609698_3611042_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AZT69497.1\|3611045_3611582_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
AZT69498.1\|3611648_3612134_-	Hcp1 family type VI secretion system effector	NA	NA	NA	NA
AZT69499.1\|3612276_3612660_-	hypothetical protein	NA	NA	NA	NA
AZT69500.1\|3612644_3613130_-	hypothetical protein	NA	NA	NA	NA
AZT70483.1\|3614170_3614503_-	hypothetical protein	NA	NA	NA	NA
AZT69501.1\|3614629_3614740_-	hypothetical protein	NA	NA	NA	NA
AZT69502.1\|3614802_3616311_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AZT69503.1\|3616334_3616877_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AZT69504.1\|3619982_3620885_+	type VI secretion system-associated protein TagK	NA	NA	NA	NA
AZT69505.1\|3620871_3621696_+	impE family protein	NA	NA	NA	NA
AZT69506.1\|3621692_3622187_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
AZT69507.1\|3622202_3624086_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AZT69508.1\|3624082_3625078_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AZT69509.1\|3625088_3626144_+	cytoplasmic protein	NA	NA	NA	NA
AZT69510.1\|3626673_3627405_-	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	6.4e-39	39.9
AZT69511.1\|3627468_3627936_+	ribonuclease HI	J9Q745	Salmonella_phage	4.7e-51	58.9
AZT69512.1\|3627932_3628655_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AZT69513.1\|3628689_3629445_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
AZT69514.1\|3629516_3630884_+	murein transglycosylase D	A0A0A7NU10	Lactobacillus_phage	1.4e-10	33.0
AZT69515.1\|3630939_3631710_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AZT69516.1\|3631787_3632588_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
AZT69517.1\|3633998_3634913_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZT69518.1\|3634934_3635738_-	2,5-didehydrogluconate reductase DkgB	A0A1V0SDE7	Indivirus	3.2e-39	35.4
AZT69519.1\|3635974_3636433_-\|transposase	IS200/IS605-like element IS200F family transposase	I4AZI8	Saccharomonospora_phage	7.7e-14	31.5
AZT70484.1\|3636389_3636626_-	hypothetical protein	NA	NA	NA	NA
AZT69520.1\|3636573_3637832_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	2.2e-18	34.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP034724

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP034723

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection