CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP034791	Caldicellulosiruptor changbaiensis strain CBS-Z chromosome, complete genome	12 crisprs	WYL,cas14k,cas10,csm3gr7,csm4gr5,csm5gr7,cas6,csx1,csm2gr11,cas3,cas5,cas7,cas8b1,cas2,cas1,cas4,csx20,csa3,cas14j,DEDDh,cas8b2	0	11	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP034791_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034791_1

11082-11845

TypeV

Consensus_repeat	Method
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	CRISPRCasFinder
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	CRT
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	PILER-CR

11 spacers

WYL,cas14k

The CRISPR arrays of CP034791_1

>merge|CP034791|1|11082-11845|CRISPRCasFinder,CRT,PILER-CR
ATTTCAATCCCCAAAGGGTAGGCTACAAACTACAGCTACTATGATAACGGGAACTTAACGACTTGGTTTCAATCCCCAAAGGGTAGGCTACAAACAATGCTGGATTCAGACCAGCACTATTGGAGAAAAGACGTTTCAATCCCCAAAGGGTAGGCTACAAACTTTCCTTGTAGTATTTCTTCCTATCTGCCATAAGGTGTTTCAATCCCCAAAGGGTAGGCTACAAACCAATATGTATCACCAATATTTACCCATAAAGTACCGTTTCAATCCCCAAAGGGTAGGCTACAAACAGAAATAAAGGAATTGTTTTTATTACAATACGAAAAGTTTCAATCCCCAAAGGGTAGGCTACAAACCATTAGTTAAAGAACTTTTAGATGAAAATGAAATATGTTTCAATCCCCAAAGGGTAGGCTACAAACTCTGTAATTGCAGTATTTATTTGTATTGCATAATTTTGTTTCAATCCCCAAAGGGTAGGCTACAAACCTAAGCTGCATACCACTCTTCAGCTGCTCGCTCAGCGGTTTCAATCCCCAAAGGGTAGGCTACAAACTGGTGAGAAGATGAAGCTGACGATGGATTTCTTTGTAGGTTTCAATCCCCAAAGGGTAGGCTACAAACGGGCGGTGGGAACCGCTCTATTTTTTTTGAAAGGGGTGTGTTTCAATCCCCAAAGGGTAGGCTACAAACTTACGAAAATGTAATACAAATTTTGTGCAAGTTGCTCAGTTTCAATCCCCAAAGGGTAGGCTACAAAC

>CP034791|1|1|11082-11845|CRISPRCasFinder
ATTTCAATCCCCAAAGGGTAGGCTACAAAC	TACAGCTACTATGATAACGGGAACTTAACGACTTG
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	AATGCTGGATTCAGACCAGCACTATTGGAGAAAAGAC
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	TTTCCTTGTAGTATTTCTTCCTATCTGCCATAAGGT
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	CAATATGTATCACCAATATTTACCCATAAAGTACC
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	AGAAATAAAGGAATTGTTTTTATTACAATACGAAAA
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	CATTAGTTAAAGAACTTTTAGATGAAAATGAAATAT
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	TCTGTAATTGCAGTATTTATTTGTATTGCATAATTTT
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	CTAAGCTGCATACCACTCTTCAGCTGCTCGCTCAGCG
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	TGGTGAGAAGATGAAGCTGACGATGGATTTCTTTGTAG
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	GGGCGGTGGGAACCGCTCTATTTTTTTTGAAAGGGGTGT
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	TTACGAAAATGTAATACAAATTTTGTGCAAGTTGCTCA
GTTTCAATCCCCAAAGGGTAGGCTACAAAC

>CP034791|1|1|11082-11845|CRT
ATTTCAATCCCCAAAGGGTAGGCTACAAAC	TACAGCTACTATGATAACGGGAACTTAACGACTTG
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	AATGCTGGATTCAGACCAGCACTATTGGAGAAAAGAC
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	TTTCCTTGTAGTATTTCTTCCTATCTGCCATAAGGT
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	CAATATGTATCACCAATATTTACCCATAAAGTACC
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	AGAAATAAAGGAATTGTTTTTATTACAATACGAAAA
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	CATTAGTTAAAGAACTTTTAGATGAAAATGAAATAT
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	TCTGTAATTGCAGTATTTATTTGTATTGCATAATTTT
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	CTAAGCTGCATACCACTCTTCAGCTGCTCGCTCAGCG
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	TGGTGAGAAGATGAAGCTGACGATGGATTTCTTTGTAG
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	GGGCGGTGGGAACCGCTCTATTTTTTTTGAAAGGGGTGT
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	TTACGAAAATGTAATACAAATTTTGTGCAAGTTGCTCA
GTTTCAATCCCCAAAGGGTAGGCTACAAAC

>CP034791|1|1|11083-11845|PILER-CR
TTTCAATCCCCAAAGGGTAGGCTACAAACT	ACAGCTACTATGATAACGGGAACTTAACGACTTGG
TTTCAATCCCCAAAGGGTAGGCTACAAACA	ATGCTGGATTCAGACCAGCACTATTGGAGAAAAGACG
TTTCAATCCCCAAAGGGTAGGCTACAAACT	TTCCTTGTAGTATTTCTTCCTATCTGCCATAAGGTG
TTTCAATCCCCAAAGGGTAGGCTACAAACC	AATATGTATCACCAATATTTACCCATAAAGTACCG
TTTCAATCCCCAAAGGGTAGGCTACAAACA	GAAATAAAGGAATTGTTTTTATTACAATACGAAAAG
TTTCAATCCCCAAAGGGTAGGCTACAAACC	ATTAGTTAAAGAACTTTTAGATGAAAATGAAATATG
TTTCAATCCCCAAAGGGTAGGCTACAAACT	CTGTAATTGCAGTATTTATTTGTATTGCATAATTTTG
TTTCAATCCCCAAAGGGTAGGCTACAAACC	TAAGCTGCATACCACTCTTCAGCTGCTCGCTCAGCGG
TTTCAATCCCCAAAGGGTAGGCTACAAACT	GGTGAGAAGATGAAGCTGACGATGGATTTCTTTGTAGG
TTTCAATCCCCAAAGGGTAGGCTACAAACG	GGCGGTGGGAACCGCTCTATTTTTTTTGAAAGGGGTGTG
TTTCAATCCCCAAAGGGTAGGCTACAAACT	TACGAAAATGTAATACAAATTTTGTGCAAGTTGCTCAG
TTTCAATCCCCAAAGGGTAGGCTACAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP034791.1\|AZT89213.1\|16704_17292_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
CP034791.1\|AZT89216.1\|22616_22982_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|200455
CP034791.1\|AZT89207.1\|9907_10720_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|110924
CP034791.1\|AZT89215.1\|20243_22571_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226482
CP034791.1\|AZT89199.1\|0_1365_+\|chromosomal-replication-initiator-protein-DnaA	unknown	unknown	gnl\|CDD\|234667
CP034791.1\|AZT89206.1\|9151_9880_+\|rhomboid-family-intramembrane-serine-protease	unknown	unknown	gnl\|CDD\|223777
CP034791.1\|AZT89214.1\|17276_19976_-\|NgoFVII-family-restriction-endonuclease	unknown	unknown	gnl\|CDD\|223989
CP034791.1\|AZT89203.1\|4128_6048_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	unknown	unknown	gnl\|CDD\|235542
CP034791.1\|AZT89210.1\|14025_14220_+\|DUF2892-domain-containing-protein	unknown	unknown	gnl\|CDD\|378561
CP034791.1\|AZT89205.1\|6576_9006_+\|DNA-gyrase-subunit-A	unknown	unknown	gnl\|CDD\|235502
CP034791.1\|AZT89204.1\|6070_6544_+\|flavodoxin-family-protein	unknown	unknown	gnl\|CDD\|223788
CP034791.1\|AZT89208.1\|12355_12925_+\|LemA-family-protein	unknown	unknown	gnl\|CDD\|377192
CP034791.1\|AZT89202.1\|3799_4084_+\|DUF370-domain-containing-protein	unknown	unknown	gnl\|CDD\|377201
CP034791.1\|AZT89212.1\|15683_16685_+\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
CP034791.1\|AZT89211.1\|14383_15700_+\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
CP034791.1\|AZT89201.1\|2717_3764_+\|DNA-replication/repair-protein-RecF	unknown	unknown	gnl\|CDD\|234608
CP034791.1\|AZT89209.1\|12943_13765_+\|TPM-domain-containing-protein	unknown	unknown	gnl\|CDD\|224429
CP034791.1\|AZT89200.1\|1586_2690_+\|DNA-polymerase-III-subunit-beta	unknown	unknown	gnl\|CDD\|235541
CP034791.1\|AZT91592.1\|23057_24275_+\|transposase	cas14k	-	gnl\|CDD\|223747

Protein	Function_ID	Function_description	E-value
CP034791.1\|AZT89213.1\|16704_17292_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.57594e-19
CP034791.1\|AZT89216.1\|22616_22982_+\|hypothetical-protein	gnl\|CDD\|200455	cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase). AmyA (EC 3.2.1.1) catalyzes the hydrolysis of alpha-(1,4) glycosidic linkages of glycogen, starch, related polysaccharides, and some oligosaccharides. This group includes Chloroflexi, Dictyoglomi, and Fusobacteria. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	1.13582e-35
CP034791.1\|AZT89207.1\|9907_10720_+\|hypothetical-protein	gnl\|CDD\|110924	pfam01972, SDH_sah, Serine dehydrogenase proteinase. This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan.	1.07718e-114
CP034791.1\|AZT89215.1\|20243_22571_+\|hypothetical-protein	gnl\|CDD\|226482	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only].	4.47378e-30
CP034791.1\|AZT89199.1\|0_1365_+\|chromosomal-replication-initiator-protein-DnaA	gnl\|CDD\|234667	PRK00149, dnaA, chromosomal replication initiator protein DnaA.	0
CP034791.1\|AZT89206.1\|9151_9880_+\|rhomboid-family-intramembrane-serine-protease	gnl\|CDD\|223777	COG0705, COG0705, Membrane associated serine protease [Amino acid transport and metabolism].	4.49312e-35
CP034791.1\|AZT89214.1\|17276_19976_-\|NgoFVII-family-restriction-endonuclease	gnl\|CDD\|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	1.42259e-81
CP034791.1\|AZT89203.1\|4128_6048_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	gnl\|CDD\|235542	PRK05644, gyrB, DNA gyrase subunit B; Validated.	0
CP034791.1\|AZT89210.1\|14025_14220_+\|DUF2892-domain-containing-protein	gnl\|CDD\|378561	pfam11127, DUF2892, Protein of unknown function (DUF2892). This family is conserved in bacteria. The function is not known.	3.95245e-16
CP034791.1\|AZT89205.1\|6576_9006_+\|DNA-gyrase-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
CP034791.1\|AZT89204.1\|6070_6544_+\|flavodoxin-family-protein	gnl\|CDD\|223788	COG0716, FldA, Flavodoxins [Energy production and conversion].	1.84819e-09
CP034791.1\|AZT89208.1\|12355_12925_+\|LemA-family-protein	gnl\|CDD\|377192	pfam04011, LemA, LemA family. The members of this family are related to the LemA protein. LemA contains an amino terminal predicted transmembrane helix. It has been predicted that the small amino terminus is extracellular. The exact molecular function of this protein is uncertain.	7.65803e-91
CP034791.1\|AZT89202.1\|3799_4084_+\|DUF370-domain-containing-protein	gnl\|CDD\|377201	pfam04025, DUF370, Domain of unknown function (DUF370). Bacterial domain of unknown function.	2.35003e-06
CP034791.1\|AZT89212.1\|15683_16685_+\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	2.81307e-10
CP034791.1\|AZT89211.1\|14383_15700_+\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	7.02113e-16
CP034791.1\|AZT89201.1\|2717_3764_+\|DNA-replication/repair-protein-RecF	gnl\|CDD\|234608	PRK00064, recF, recombination protein F; Reviewed.	5.51114e-98
CP034791.1\|AZT89209.1\|12943_13765_+\|TPM-domain-containing-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	1.48268e-56
CP034791.1\|AZT89200.1\|1586_2690_+\|DNA-polymerase-III-subunit-beta	gnl\|CDD\|235541	PRK05643, PRK05643, DNA polymerase III subunit beta; Validated.	4.05588e-112
CP034791.1\|AZT91592.1\|23057_24275_+\|transposase	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	4.64802e-33

>CP034791.1|AZT89207.1|9907_10720_+|hypothetical-protein
MSFWDILILYLIITSIQPVMKQRMIESARQKMIAKIEKKRGSRVILLVHRQETMSFLGFPIYKYIDINDSEEVIRAISMTDPSVPLDIILHTPGGLVLASLQIARAIKRHKGKVTVHVPHHAMSGGTLIALAADEIVMAPDAVLGPVDPQIGEFPAVSILEVVKQKPMTEIDDRTLILADVAKKAIRQTKDAVLELLSGNYPDDVAENIAKELVEGKWTHDYPITYEKAKELGLKVRCDIDKEIQQLMSLYPQPVVKRSSVEYLWYPKGK
>CP034791.1|AZT89206.1|9151_9880_+|rhomboid-family-intramembrane-serine-protease
MIPLKDTIPSREKPFVTWTIILVNVFVFLYQVSLPQAKAEEFVFRYGFIPERFTYYLQHGLLFAVTASVGSILTSMFLHASWMHLISNMWSLWLFGDNVEDRVGHFRFLIFYILSGIVASLTHWFFNATSSIPTVGASGAISGVMGAYFLMFPLSRIVTLIPIGFIPLFIEIPAIIFLGFWFLSQVSSGILELFGPVFGSGIAWWAHIGGFLFGMLTINMFKKKYRRYNNFFDDEIFYYRYF
>CP034791.1|AZT89205.1|6576_9006_+|DNA-gyrase-subunit-A
MEELDFRIIPVEIQEEMKRSYIDYAMSVIVSRALPDVRDGLKPVHRRILYAMNEIGLTPDKPYRKSATVVGHVLAKYHPHGDAAVYESLVRMAQDFSMRHPLVDGHGNFGSIDGDPPAAMRYTEARMSRIAVEMLRDIEKETVDFMPNFDESAKEPKVLPSRFPNLLVNGSQGIAVGMATNIPPHNLAEVVDAIVYMLDHPDATLDDIMKIIKGPDFPTGGFIIGKKGIKEAYSTGKGKIVVRAKTTIEQTSKGRQRIVVTELPYMVNKARLIEKIAELVRDKKIEGISDIRDETDKEGLRIVIEIKKDADANVVLKQLYKNTQLQDTFGIIMLALVDNQPKVLTLLDMLNYYIEHQKDVIVRRTKYDLKKAEERAHILEGLKKALDHIDEIISIIRSSRTVNEAKERLIERFEFTEVQAQAILDMRLQRLTGLERQKIEEELAELLKMIEYYKNVLANEAMVKEIIKKEILEIKEKYKDERRTKIIQDEQEDFEEEELIQEQDTVITLTHFGYIKRLPLDTYKSQKRGGKGITGISTREEDFVEEVFVTTTHHYILFFTDKGKVYKLRAYEVPEASRQAKGTAIVNLIQIGKDEKITACMTVKDFKEGFLMMCTKNGTIKKVLLSEFENTTKAGKKAITLSEDDCLIDVKLTSGNDEIVLVSSGGYCVVFNENDVRVMGRSAQGVKGMTLEDGDFVVGMEKVSDGKYLLCVTENGFGKRSDIEEYRKTKRGAKGVLTYKVTEKTGRIVDIKMVNDNDEIMLCSTDGVFIRLEIDQVPIQGRSTQGVKLMRIDGDSIKVSSIARVREEE
>CP034791.1|AZT89204.1|6070_6544_+|flavodoxin-family-protein
MRFLIVFYSLTGNSRKVAQALSKVLRCEIVEIKESSSRKSIFGFLRSGYEAITKKIVPIEDIDKDFSKYDHVIVVSPIWAGNLPSPVRSFLKRYLVFIKNISFIFTLASEKEVDVINVFEKDFGKKSLYCMSISKKKIQSQEFEKAVNEFAQKIKIE
>CP034791.1|AZT89203.1|4128_6048_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B
MKLATTKNPNQEYTASEIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVYEIVDNAIDEAMAGFCKNIDVTIHRDNSVTVLDDGRGIPVDIHPKLQKSGVEVVFTVLHAGGKFNESVYKVSGGLHGVGASVVNALSRYLEVEVYRDGNIYYQKYERGKPVCDLKVIGQTQRTGTKVTFLPDDEIFETIEFDADVLLQRLRELAFLNKGIRITFTDEREKNPKTIELKYDGGIAEFVKFLNRNKEVLHPEPIYIEGEKNQILVEVAIQYTDQFGENIYSFANNIATIDGGTHLVGFKAAVTKAVNEYAKKYNFVKGDNQLLGEDIRDGMTAVVSVKIHEPQFEGQTKTKLGNSEARWAVENLVSEKLAAFLEENPDVSKKIIDKALLAAKAREEAKKARELVIKRKSALDSSNLPGKLADCSEKDPEKCEIFIVEGDSAGGSAKQGRDRRYQAILPLWGKMLNVEKASQDKIYSNDKLLPLIQALGVGVGNDIDLKKLRYHKIIIMADADVDGSHIRTLLLTFFYRYMRPLIENGHIYIAQPPLYKITKGKQVRYAYNDKELQKILQEMKDAQVQRFKGLGEMNAEELWETTMDPARRILLRVELEDAVMAEEIFTILMGEKVEPRREFIEKNAKYVRNLDI
>CP034791.1|AZT89202.1|3799_4084_+|DUF370-domain-containing-protein
MFAHIGEDYVVNSSELLLIMNYDIFMSSEDNLRILESLKNEDRLVVINDDLKKSIIILEIDGRLYAIVSPVSSTTIAKRFLNFNYYVDNYLDES
>CP034791.1|AZT89201.1|2717_3764_+|DNA-replication/repair-protein-RecF
MIIKSIYLENFRNHNERFFEFKDGINLILGKNASGKTNLLEAIYFCLCGKSFKSKDTNLISFDSEYFKLEASVLANDVEYGILCYVDRLGQKRIMINEKKINRLSELIEKFKFVYFEPDSTELIKQDPKVRRKFLDMEVAKLYPYMIKTFQDYQKALMSRNAFLKSYDKKDIIDVYDIELSKLGCQILKKREEIIKRLSEATKEIWYKVFEDKSTIDIVFRPSIPSSSEEEYYSQLKKQFEKDVQMGFTTKGVHRDDFDVFINGQNAKEYASEGQIKFACIAISLASAKLFEKPVLLLDDIFSELDSEKRKNVLKLCKDYQAIITSADEKDSLVKTGLLSHDINLIQL
>CP034791.1|AZT89200.1|1586_2690_+|DNA-polymerase-III-subunit-beta
MRFVVDKSTLQDNISKVIPAAASTKVTSILECVLIEAEDVVVFTTNDMKMQMQTEFQAEILERGAALVKAKLLSDIVKKLPSGDVEIIREDNEVKIRCQKIEFRLPTLDPLDFPKMDRKPIDSFCEFAANEFEDAMDKVIFATSKDETRPTFTGVLFEREGDVINLVGMDGHRLAICKLKPIEVDGEFSKIVPAENLDDITKIIDIEEAEKVRVSFFENQALFEIGSTSVIVTLISGRFFDYKNVIPTEYSTKISISADVLESTLERASIVSKDEKTNVQAVIFEVSGMMFRVMSYSTDGRYEEDVLCDVEGKDIRIGFNVKYFLDVLKVLDGGVDIYITSLTSPSVVKQQGDEGYIYLVLPVKMPE
>CP034791.1|AZT89199.1|0_1365_+|chromosomal-replication-initiator-protein-DnaA
MVDYDVNKVWEDIKEVIKKELNPSPTDISYNTWVETLVPICFDENDTFILKAFADFHREIVINRYSLLILNALRQLYSPHLSLKVILPNEVEKYKKYIKQKQEEKVEVTTTLNPKYTFETFVVGNNNRLAHAAALAVAETPPGEKTYNPLFIYGGVGLGKTHLMHAIGHHVLKLYPDTKVMYVTSEIFTNELIAAIRDEKTDEFRMKYRNVDVLLIDDIQFLGGKERTQEEFFHTFNTLYEANKKIILSSDRPPKEINTLEDRLRSRFEWGLITDIQPPDFETRIAILSKKCQLEGTPVPQHILEFIASKIETNIRELEGALNKILAYSKLMAPDKEITLELAEKALKEFIDTNTKKELTIEDIQAEVAGYFNIKLEDFKSSRRSRNVAFPRQIAMYLARELTNVSLPKIGEAFGGKDHTTVLHACEKIKELINKDTNIRNTVENLKKRLINRE
>CP034791.1|AZT89208.1|12355_12925_+|LemA-family-protein
MKRKSRVLIIILVAIAFVLLYLFSVYNSLVKAEENVKSKWSQVENQLQRRADLIPNLVNTVKGYAKHEKDIFEKLAEARSKLINSSTVEDKVKANEELSNALSRLLAIVENYPDLKADQTFITLMDELSGTENRIAVARKDYNDAVRSYNTKIKVFPNVIIARMFGFEEKPYFKAEAEAQKVPTVDFSK
>CP034791.1|AZT89209.1|12943_13765_+|TPM-domain-containing-protein
MLNTLKARKNFYLAFIFLMLFLLIVFLPLYSLASIPQKPAENSYVFDYANLIDDSDEDQMRALAKKIEDSTSAEIVVVTVETLGNYTIEEYALNLFRKWGIGNKEKDNGVLILVNKENLLANKKGKIRIEVGYGLEGAIPDGKAGRILDTYAIPAFENKEYSRGIKDTFYAVASEVAKEYNLNLDELQGYGDAQTIDNNSTAEDDSELKLPDAIAIIVFVIIFVFISLKSRRKGSWWYRGPWDGFGGGFGGGSSGGGFGGFGGGSSGGGGASR
>CP034791.1|AZT89210.1|14025_14220_+|DUF2892-domain-containing-protein
MKNVGPIDKAIRIILGLVLLSLLFIVKSNAKYFGLIGIIPLITGFIGYCPLYSIFGINTLKKKR
>CP034791.1|AZT89211.1|14383_15700_+|WYL-domain-containing-protein
MPEFNPFINDFNKLRNFSRLVYLYGCYSREDAELFKIGKRTFDEELRRMRVFLKEDEYLSVERDGKKVLPCIVEDFFKEVENPLINIYFSKTSTPLQTTLFFKILQILNSSKNKRATTNEIVDKIYFALDERTKDKAIDSSIKRTLKEMQSIGVIKFLKKEKVYVLSNTIERLFSGFSKDEVKNIYLSVLFFINTNVPNVPGWFLKESLEKYLLKNGEEEFVKEANQLFWFTYVPHHYVLDEELVWRFWQAASSGRKIKIWYYPRSKNERKEYTCIPLRIIYDVKLGRWYFIVLFEKAINTLPASRVEKIEILDETFDKNIFKEYWKVIEKCFFVSVPLKKTGFKKIKLRFILDDKEASFNFVLNRVKRELKDAKIDIVSQNEFVVEYELSNLKEFKPWLRSFSHRVVVEDGSEDSSKLRQEIIEEWKEILRNYGDIQ
>CP034791.1|AZT89212.1|15683_16685_+|WYL-domain-containing-protein
MEIFSSIKSTFYKALEEIINTAYENGGITRRGVQEILQKYNCNFPSLERRVLDKNEEENKNLYLLKKEDDSQQLTLRIDAPIEPYATDIELMWLKFMLSSRYVHLFLEDETIEKIKKLKVNNNFLFDPEILLPKNYSKVVKREWVREIGKKLRILIHAALEKKAINYTYITRSGYQFKETGIPVKIQYSLKDDLLYAIIYSITSHSFAKCVVQNLHDISLTSEKVDMTEISKEYEEFLKKSSAPEPIVLEVMNTRNALERAFCLFSSFKKSARFLREKNKHQLTIYYYTFEEAEVLSRILYLGKDVVVISPERIRNEIISRVKKALERYEEKV
>CP034791.1|AZT89213.1|16704_17292_-|class-I-SAM-dependent-methyltransferase
MDPTIRYYDENAIEFFENTKNADMKELYELFLKYLPKGSKILDLGCGSGRDTKYFLQNGYDTVAIDGSLEMVKLSTQYTGKQTFHMTFEQLDFFEEFDGVWACASLLHVPRSKIDLIFRKIYLALKKNGIFYSSYKYGNTEEFRNGRFFNNYDESSFMALLKNHPYFELLEMKTTNDVRKGRENEKWLNVILKKK
>CP034791.1|AZT89214.1|17276_19976_-|NgoFVII-family-restriction-endonuclease
MNSERLKAIQEHLTKISIEDVAEIYKDLENIYNQLLSKHGIDIQKCFCGANENFLEELKKAFSKAVEINMIVSFLLESGVRLIIEDLIEAKKRNCPIRIVTGRYLNITQPSALYLIKDRLGSYVDLRFFKDDNIPFHPKAYIIEYEGGKGDIFIGSSNLSESALTYGIEWNYRIEKTTNPKDFEQFKKEFFKILKSCTEKIDDELLRKYSRSWKRPKIFIEIKEIQAEVENTDNSAEDIDSTSSKDISMVAEEVLEYDKSTFAEKDDTEQSKTQHKKPNSRKIVPLYPREAQTEALYWLKKCREEGLDRALVVAATGIGKTFLAAFDSIGFKTVLFVAHREEILRQAALSFKTIRSNATIGFFTGDRKETDKDIIFASVQTLGKEEYLNPTYFSSDYFEYIIIDEFHHAVAKSYQNIINYFKPKFLLGLTATPERLDNKDVFELCNYNVVYELRLKDAINKGYLVPFHYYGIYDETDFSQIPEINGKFKEDELEKVLMIHKRADLILKNYLKFNKQKTLAFCCSRNHAEFMADYFNKNGVKCCAVYSGEQGKNALQRSEAIRKLKNGQIKVIFTVDMFNEGVDIPEIDMVMFLRPTESPTVFLQQLGRGLRKAKNKNYLTVLNFIGNYKRANLIPFLLSTGEYDIEKIKKSKYSVDDFEYPDGCVVDFDFRIIDIFKKQAESLKNIQEIVYEEFLRIKEMLGKRPSRVEFFKYIDTAIYASMKKYSDPFINVFKDYISFLKINNQLEEGEESLFNTFAHQFIKVVENTMMTKIYKMPLLLAFYNNGNIKLKVGPDDIYEAFKEFFSNPSNAIDLEVHKSTRNYKDWQKEEYIKLSRNNPEKYLISSHPEFFYWDGDYFCINDKLADFINNEYFLMHFKDAIDFRIKRYYRERYEKWTQQ
>CP034791.1|AZT89215.1|20243_22571_+|hypothetical-protein
MANNLQNDIIYEEEKNQLKKVVKYIDEKIENRKKTIDKLEEDLITYHSRSADEIEDYIANRKKIKRINEEILKLLEQRYMPYFARVDLEKSHDSKKSIDVVYIGKSALLDNKGNLIVSDWRSDIAKTYYQNTEIEFKINDIWYLVLLRRSFDIKNGELISYKNEFVYDDSLPSKYDQLLDPFLVQLIKEKRTEGKFTDIIRTIQRKQIEIIYEKYDQNIIVQGYAGSGKTMILLHRLSYLLYNNKNINPHSIWIITPNNIFNKQIKDLAHELELDLVNKGTIVDYYLEKLDNYGFKFVENIRARRKNEDEYIKTVEAYLGDEDSLPKEMLDYCYSDECLEELKNAYKQWVRGIKNYLENIGYRELMQKNNIKVGNYRFFDEALREILTNVNWLIGENEIINEKIEDVKGYIENVENLIAQTNKEIQEIEIIANKLKNKENISEEIVKKYGLKDRENINTQLLVLKNKLIKLKKRLKLYQQKLVEYQTELDNLTQRMLSKEIIYKLVKLKRLIPEYEIKDNKIYKDNFLTKVYKPLREKIFLRFGQKLTKNIFYKFDLYLILNLCCEHFGLPNKQEKLIFIDEGQDITLNEYKLFIKLNDNRAVFNIYGDLLQSILKSGLGDWEELKNILNAKYYELIENYRNSNEIACFCNDKFNISMQPIGINSFAVKEFTLENINILEFQKTINEFDENGLRAIVVKDYYPELMEKIFKLFPKGEINKVSESKRLFLRKFNLFDIKLAKGLEFRQCIVFTQGMTNNEKYVAFTRAMDHLIIVN
>CP034791.1|AZT89216.1|22616_22982_+|hypothetical-protein
MLKILELKNSKNKGIIQCKQYHLKGETNYYKIDPDYGTEKDFQNFLGKTHKMGFKVILDMMMNHTPSQHPWFIEASTNKNSKYRNYYIWADSKTNINQLSAFGPRQWYKKGDSYYYALSKN
>CP034791.1|AZT91592.1|23057_24275_+|transposase
MYKTQKNHIRCDKQTYRLLRQLCHLSKNLYNYGLYHIRQHYFKTQEYLRYESVYHLVKGSENYRLLPSQVAQQTLISVSEAFKSFRGLLKSKKEGKVEEKVSMPKYLPKDGMYQIVFPKDQFKTEGKKVRLSLGRGFAKEFGVRYLYFELPKTVLGKKLKEVRIVPRLGGKWFEIEYVYEEEYKLNTFDLSRYLGVDLGLDNFAAVVDTIGTAFLIEGRFLKSVNRWYNKQRARLQSIYSRQGIKCGRKLAQISLKRQHIIDNFLNQAVSLIIKHCLNNQVSAVVVGKMKGIKQGIELGVVNNQNFVGIPYDKFKRKLKSKCMYYGIRYVEVDESYTSQRCSRCGQVSKSSRKYRGLYVCKKCGYVVNADINGAINILAKVAGESVVKQITSSGCVNHPVRIRVA

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Crispr_ID: CP034791_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034791_2

34307-34800

TypeIII

Consensus_repeat	Method
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	CRISPRCasFinder
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	CRT
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	PILER-CR

7 spacers

cas10,csm3gr7,csm4gr5,csm5gr7,cas6,csx1

The CRISPR arrays of CP034791_2

>merge|CP034791|2|34307-34800|CRISPRCasFinder,CRT,PILER-CR
GGTTCAATCCCCAAAGGGCAGGCTACAAACCCCGCTGAAGATACCAATTTTGAAGTCAATATAAAAGTGTTTCAATCCCCAAAGGGTAGGCTACAAACTGAAGATGATGATGAAGATGAAGACGAAGACGACGGTTTCAATCCCCAAAGGGTAGGCTACAAACACAGAAACTCATTGCTGAAAGAGTAGGACAGGACTGGTTTCAATCCCCAAAGGGTAGGCTACAAACTTGAAGGTGATTACTACGTACTTGTTAAACCAGAAGGGTTTCAATCCCCAAAGGGTAGGCTACAAACAGGCGGTGCTATTAGTGAAGTCTAAGAAGATGATAGGTTTCAATCCCCAAAGGGTAGGCTACAAACGGATGGTACTGGTAGTGTGATTTATAGTTTTCCGACGTTTCAATCCCCAAAGGGTAGGCTACAAACAGATTTTATTTATCACTCCATATATGAACTCTTCCAGTTTCAATCCCCAAAGGGTAGGCTACAAAC

>CP034791|2|2|34307-34800|CRISPRCasFinder
GGTTCAATCCCCAAAGGGCAGGCTACAAAC	CCCGCTGAAGATACCAATTTTGAAGTCAATATAAAAGT
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	TGAAGATGATGATGAAGATGAAGACGAAGACGACG
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	ACAGAAACTCATTGCTGAAAGAGTAGGACAGGACTG
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	TTGAAGGTGATTACTACGTACTTGTTAAACCAGAAGG
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	AGGCGGTGCTATTAGTGAAGTCTAAGAAGATGATAG
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	GGATGGTACTGGTAGTGTGATTTATAGTTTTCCGAC
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	AGATTTTATTTATCACTCCATATATGAACTCTTCCA
GTTTCAATCCCCAAAGGGTAGGCTACAAAC

>CP034791|2|2|34307-34800|CRT
GGTTCAATCCCCAAAGGGCAGGCTACAAAC	CCCGCTGAAGATACCAATTTTGAAGTCAATATAAAAGT
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	TGAAGATGATGATGAAGATGAAGACGAAGACGACG
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	ACAGAAACTCATTGCTGAAAGAGTAGGACAGGACTG
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	TTGAAGGTGATTACTACGTACTTGTTAAACCAGAAGG
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	AGGCGGTGCTATTAGTGAAGTCTAAGAAGATGATAG
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	GGATGGTACTGGTAGTGTGATTTATAGTTTTCCGAC
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	AGATTTTATTTATCACTCCATATATGAACTCTTCCA
GTTTCAATCCCCAAAGGGTAGGCTACAAAC

>CP034791|2|2|34309-34800|PILER-CR
TTCAATCCCCAAAGGGCAGGCTACAAACCC	CGCTGAAGATACCAATTTTGAAGTCAATATAAAAGTGT
TTCAATCCCCAAAGGGTAGGCTACAAACTG	AAGATGATGATGAAGATGAAGACGAAGACGACGGT
TTCAATCCCCAAAGGGTAGGCTACAAACAC	AGAAACTCATTGCTGAAAGAGTAGGACAGGACTGGT
TTCAATCCCCAAAGGGTAGGCTACAAACTT	GAAGGTGATTACTACGTACTTGTTAAACCAGAAGGGT
TTCAATCCCCAAAGGGTAGGCTACAAACAG	GCGGTGCTATTAGTGAAGTCTAAGAAGATGATAGGT
TTCAATCCCCAAAGGGTAGGCTACAAACGG	ATGGTACTGGTAGTGTGATTTATAGTTTTCCGACGT
TTCAATCCCCAAAGGGTAGGCTACAAACAG	ATTTTATTTATCACTCCATATATGAACTCTTCCAGT
TTCAATCCCCAAAGGGTAGGCTACAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP034791.1\|AZT91593.1\|28868_29567_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89229.1\|41852_42788_+\|hypothetical-protein	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	unknown
CP034791.1\|AZT89227.1\|37998_40446_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
CP034791.1\|AZT89233.1\|45693_46173_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|187863
CP034791.1\|AZT89218.1\|24674_27722_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
CP034791.1\|AZT91594.1\|41123_41825_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
CP034791.1\|AZT89225.1\|33913_34165_-\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89217.1\|24313_24568_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379869
CP034791.1\|AZT89226.1\|35259_36651_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|224586
CP034791.1\|AZT89230.1\|42784_43987_+\|hypothetical-protein	csm5gr7	mkCas0182_csm5gr7_CAS-III-A	unknown
CP034791.1\|AZT89219.1\|27928_28324_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89223.1\|31657_32644_-\|ATP-dependent-helicase	unknown	unknown	gnl\|CDD\|223288
CP034791.1\|AZT89220.1\|28415_28676_-\|stage-V-sporulation-protein-S	unknown	unknown	gnl\|CDD\|377254
CP034791.1\|AZT89224.1\|33537_33930_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350250
CP034791.1\|AZT89232.1\|44782_45694_+\|TIGR02221-family-CRISPR-associated-protein	csx1	cd09732_csx1_CAS-III	gnl\|CDD\|378186
CP034791.1\|AZT89222.1\|30213_31029_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89234.1\|47377_47632_-\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89228.1\|40454_41075_+\|type-III-A-CRISPR-associated-protein-Csm2	unknown	unknown	gnl\|CDD\|367635
CP034791.1\|AZT89231.1\|43990_44728_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|187783
CP034791.1\|AZT89221.1\|29609_30119_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP034791.1\|AZT89218.1\|24674_27722_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	1.95141e-105
CP034791.1\|AZT89233.1\|45693_46173_+\|hypothetical-protein	gnl\|CDD\|187863	cd09732, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as TM1812 family.	0.00605887
CP034791.1\|AZT89220.1\|28415_28676_-\|stage-V-sporulation-protein-S	gnl\|CDD\|377254	pfam04232, SpoVS, Stage V sporulation protein S (SpoVS). In Bacillus subtilis this protein interferes with sporulation at an early stage and this inhibitory effect is overcome by SpoIIB and SpoVG. SpoVS seems to play a positive role in allowing progression beyond stage V of sporulation. Null mutations in the spoVS gene block sporulation at stage V, impairing the development of heat resistance and coat assembly.	6.53583e-36
CP034791.1\|AZT89226.1\|35259_36651_+\|ATP-binding-protein	gnl\|CDD\|224586	COG1672, COG1672, Predicted ATPase (AAA+ superfamily) [General function prediction only].	4.96603e-31
CP034791.1\|AZT89217.1\|24313_24568_+\|hypothetical-protein	gnl\|CDD\|379869	pfam16657, Malt_amylase_C, Maltogenic Amylase, C-terminal domain. This is the C-terminal domain of Maltogenic amylase, an enzyme that hydrolyzes starch material. Maltogenic amylases are central to carbohydrate metabolism.	4.79075e-09
CP034791.1\|AZT89223.1\|31657_32644_-\|ATP-dependent-helicase	gnl\|CDD\|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	1.01949e-12
CP034791.1\|AZT91594.1\|41123_41825_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	2.99236e-79
CP034791.1\|AZT89224.1\|33537_33930_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350250	cd18683, PIN_VapC-like, Uncharacterized subfamily of the VapC (virulence-associated protein C)-like family of the PIN domain superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	3.97711e-25
CP034791.1\|AZT89227.1\|37998_40446_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	7.89848e-58
CP034791.1\|AZT89232.1\|44782_45694_+\|TIGR02221-family-CRISPR-associated-protein	gnl\|CDD\|378186	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. The family describes Cas proteins of about 400 residues that include the motif [VIL]-D-x-[ST]-H-[GS]. The CRISPR and associated proteins are thought to be involved in the evolution of host resistance. The exact molecular function of this family is currently unknown.	3.86442e-55
CP034791.1\|AZT89231.1\|43990_44728_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	3.21402e-18
CP034791.1\|AZT89228.1\|40454_41075_+\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	0.000206843

>CP034791.1|AZT89225.1|33913_34165_-|hypothetical-protein
MIIRKIVNGYQLEKIVDIPEAAKNMPVELIVRIPLNKRKKSKKGDEILNELSGVFGKYKNPNLIPSEEEAWKNTVREIYEKEQ
>CP034791.1|AZT89224.1|33537_33930_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MRKNNKKILKLIDANVILRFLLNDIAELNQIAKEIIKNNEVLILNEVVAEIVYVLEKVYKVERKNICNTLIKLFNHPNIFVQDLEMLTEAFKFYADKSIDFVDAILVAQNKCKGYTVYTFDKKLEKHLHS
>CP034791.1|AZT89223.1|31657_32644_-|ATP-dependent-helicase
MAIHRLVYLLNEYCFAPDAKILMVTFNKTLVNFLKYLYNKLDEEISLSFDALVNDNKDKVKICSIDSIIYGYFQEYKESSGCNLELVNNKTVKYNFINRAIIKLKDKYPKVQYIDLAFANFLLDEIEWIKACNIRKLEEYQSTDRIGRTATSQKDVPQKIAKNSETKKAIFELMQLYTQLLKENGLVDFKDMALIALDYLKENEHRIPKYTHIIIDESQDLTRTQLEIIKLFYNSEKSYSSIMFIADTAQSIYTHSWLVRGRSFASIGFDMTGKSYILSKNYRTTVQIANLAYSLIEKTPEIIEDENFVKPALIDKQGPFTRAKNLSK
>CP034791.1|AZT89222.1|30213_31029_+|hypothetical-protein
MEKRKDKDKFSVNTSNKETILDFVERKLSENASIRELMKDEFVRFTSIRDFLYFKFCPGYFGMCPNSKNKKDKMCNPANCWERRFAALFPYGFDNDYIFYYNLVKDTITPSICYSCGSSNVELEWQDEGYLAKIGLINFADIAYVRCNSCKKKYMSHADNLAIEFIVKLFLAKPSKRSPIKPGQTVVLPKDKVGLEIFIKHLNETKDIKTVWQKLDPFSVANQFGELDLSLATSDFLCDYYNIDYSTEDDISLENFEDIDIKDLFDDFEDK
>CP034791.1|AZT89221.1|29609_30119_+|hypothetical-protein
MTITFFSEAVLENFKDIFGDVKIGMFTEISPTFEVFIDNLIQALKSMNLNIKKEIVDDIIIEIKQVQVHYMGSSKNVTDVLRKLTFLYQRDFLECMVKCNVFLKSRADTTFAVKNLEVKYKPLQRYNDTVRTLAKEVLEYLPLRDMLEKDFEYTKKALEWIEDNGVVSS
>CP034791.1|AZT91593.1|28868_29567_+|hypothetical-protein
MFKGVGEILAFSNFLNTVIQKNNWIYTKEFLEKLRIPIPTEQQLKNFDIANAFYKEFLYIVYSPDIISMLNSMKIWGANNNFDIFTDLTLDMIPIVWLGEGYYGIVEKNKERIIMPCALYQYFDDLYKNFPVSNFSVLDICEAYKRLFESEENVAMNIVYAKTIEDLKREFSKNFKDFDILFEGPGYYDLYFSPVSKRYIVAPIREILKKMFEIQLVYFHKLLNVHDRFKEK
>CP034791.1|AZT89220.1|28415_28676_-|stage-V-sporulation-protein-S
MEVLKVAASSMPQKVANALAAIVKEQGEAELQAVGASAVNQAVKAIAIARGKVAPNGIDLYVIPAFADILIDGEKKTAIKFIVKSR
>CP034791.1|AZT89219.1|27928_28324_+|hypothetical-protein
MGYINTNLQEVVDIVLKNISLSELVKEIDVTGSEIRVKIKPVSILPEIALKFTITSEAEKIVVLFDPAKSVIIYGFLLGKLKDEQIPGITLFKEGLEIDLQKLLLQNIKGIKIQNVFVTSSGEIKIDFSCG
>CP034791.1|AZT89218.1|24674_27722_+|EAL-domain-containing-protein
MKRTLKVIIISILLFLFTSQVAYCYHKTIKFQVDKQYPPFSYVINGRVYGFSVDLANLIFEPDKYFLSVSSDTWENVYKRLVSGEIDITGPIVILEERKKGVYFTDPIFTRHVGIYTRKDFNKDITLNNLASFKIGVMKSDYTETLLKERLKIKNYLTFQTIEDEFVALLEGKVDAVIISQEIANYFLVKNNYADQVEIKLKDIFILESGFGISKKHPELVDYVNTRLKELIKNGIFDQLYYNYFSTYSPYYYEKKNREVVFSILYILFIIIFASSITIFVMRGINKRLQQGKEAYEKYAELLASNANVIVLTLNLKGEIIYFNRFAEEVTGYKREEVIGKRWVDIFIPEHKREYIEKLFSEIAEKKVLNNFENEIITKTGDVCWIIWNNVVVESPYLNEPLIISTGLDITPIKKNQRLLEESYEELEETNQELVNTLEILNKQTELLKEEEERYKFIVENISDCIWEFDVAEKRIEFYGNLKDYFETDKINPKIDYYAWLELYHPDDIKALMEKIQRAFELRDEKIEYEARIKDKNGNYKWVSVHIKVFYDNRGKPEKLIGINIDYSAKKEYEDRIKYLAYYDDLTNLPNRKLFENKLSELIKKAAQTGKIGAVILIDIDNFKDINDLYGHEVGDEYLRTISQKIAEYLKGLEVQNYFSRVGGDEFAIILNGLEKKDFVIEVCTEIQKIFENEIFLEKIERGLYTTVSMGISFYPEDGRDSKEILRNVDMALSLAKENGKNDFQIFMPFLLLKNLNKIEIEKNLRKAIENDEFVLYYQPVVNLENMEIHSVEALIRWFLPQKGMVSPLEFIPVAEESGLIVRIGEVVIEKALRDLRDWERKGINDIHIAINLSARQFKTKYFENTVAKLLEKYSVDPVKVSFEITETGAVENFDVSLKILGFLCQMGIKFLIDDFGTGYSSLIYLRKLPISGVKIDKSFISELMFSKESRAIVEGIILMAHKLGLKVVAEGIENKKELEILKEIGCDFGQGYLFSKPIPKEEVEKLLLQKKVLM
>CP034791.1|AZT89217.1|24313_24568_+|hypothetical-protein
MDGSSLRGDFKLIQTNESIFAFVITYGNDSILIVLNLSDKPVSGNIPIYAKGLKGNLIKGFGDFSLKGSNLKYNIKSPSFVIID
>CP034791.1|AZT89226.1|35259_36651_+|ATP-binding-protein
MKKFINRKQELDFLEKQYQEQKSSLVVIYGRRRIGKTALIKKFIEDKPAIYFLGSEEVESQNIEYFKRAVSSFLKNPLIEKLSGISWDDIFDILVKTKSDKKMVIVFDEFQNLCKTNPAFASILQRIWDEKLKSGNFMLILCGSLISMMQEYALSYSSPLYGRRTGQIKLKQFSFKEAKEFFPDASDDEFIWIYSVVGGVPKYLEMFKYEGDIYKAIEENILSRQSFLYEEPLFLLEKEVHEIGSYFSIIKSIALGNHKLSQIAQSLSVPQTKLTKYLNTLIELDIIRREVPITEEYPEKSKRGLYFINDNFINFWFKFVYPYREQLELDNIEYVIENIRSKIVASHISYVYEEVCKQILSDLIRSKKMDVHVDKIGKWWDGKSEIDIVGIGRSMRHVVFGECKYSQNMADIDVFFDLKKKAENVKVFPDQKEFYVLFSRAGFSERLLEYAEEAKNLFLIKFP
>CP034791.1|AZT89227.1|37998_40446_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MCLGKETYRNLIAVTALLHDIGKFIRRSGLGSLSHQEESKKFLEKYMEKFRNKNLFTNQELELIKRLIENHHNIEKINKSSACSDAENNLLKILIYSDWDSASERRQEKETSGSQEYVPIHSILSFINEAFDIDEALRQGEEDKIFEHISYVRAFSPQDAFVYERPELNPAHPVVEDNRKRFEIFESEFKTLIEESKNQYEFVLRLNYILKKHTTYITSSGKEKIRDISLYHHSATTAMFAINRLIDFEHGEQIEQRKQYGAVYGRLFKIQDYIFSGINSKIEKPLKRIITRSQLVSILNMLIPYDIVKTLDLYPFNIIFYGGGAFLILIPLSYISKAQERIKEIKKTVDEIFESKIYFEAVYERISVYENGYVLGNELKSLGEKLSEKKFARSFDTIAPFIHEKYFEKAYFKCENCKINSSKTILSGENFVCKCCQVEEKWMNEDITKLKFLFDRLYVENIQDPELLSAGADSNSALVLTFTKSEAENRKCIDTFLQGRKFIYTADFCQRCPEYDDCAEPYKHILSEEDERLTMKLASLDCLEKMSDSDNIIATAKMDIDDLGFILYSIYPIKVLQNESYPFSITRLSYASWLLNLFFTEGVKKVINEKFKDDVMILYSGGDDLLLTGVWYKVIEAIDEIEKEFSQFVTGKVIDRKNVTVTASIYFHRAHENFDSVLIKLNEGLEEAKKIKNRVFLFDNVISYPELRRSLDISKKIVDYVNEKVLGKLIIRKLLRILEWRKLRNCYQEIKATSHYVYLKTRLIENNKNLSEDKKKEVIEFLDSFMSLHTDNSNVSMAIVAINIALRKLIKESEE
>CP034791.1|AZT89228.1|40454_41075_+|type-III-A-CRISPR-associated-protein-Csm2
MPRPNNLPHRGNNRNAQNRTATSQNQRSSTLIIDEDKQRELEQNKHDLFELIKDDNGFCDEHGIRYEVAEKIEKFAEYLNAAYVQNDSDVGVTSSSIRNIYDNYISIKRKFQTVQLEQREIEDAETRKENAFMKIKPELIFVKSKVNYTVERKLKEERNEAKKQIKELSYNALKEFINISTTKITTSYNQFEAFIKIFETLVGFMK
>CP034791.1|AZT91594.1|41123_41825_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MLLKQIIVLKTIMKIKTGLRIGGSREELKIGDIDNPVIRDPLTNEPYIPGSSLKGKMRSSLEITLKGTKDPCNCGNCPICVLFGAAKNKPQSGEKEVTRLIVRDSFMTEKSKKLLLDFVGDYVEIKKENVINRVTGVAKDPRTLDRIPAGTEFECEFVLRIYQKDQEKVEEYIKYIETALTLIELTYLGGSGTRGYGKVEFGENGNKIIEKKVYEIVKSEDGFVKVEEKSEDS
>CP034791.1|AZT89229.1|41852_42788_+|hypothetical-protein
MIYRADFLISSSSSKLISPVIFGAIADKVFELTEEKQAKELVFDMAQNVLISDALPSEEEEDDFIRYFYVPRIIPPYEDDQNSLSLRERRELARKNKKLAKSVSLVEIDNSGILKEADPSKVKDPVDFYRIGIQVNRKSAASEVGIFFYHQEFRFSKKQCYSIYIQCKKPSLVNKIEECFKVIELTGFGPDVSIGKGKISFLRHNQRILCRDEVTEQFFDSEPDVEKEYVNIASTILFDKAVSACQFKSYQTFRYDSKGYGVFKPPYFCAERSSVVVPKGKDLSFLIEYKGRFIYTCIFPLRLIQIGGEKI
>CP034791.1|AZT89230.1|42784_43987_+|hypothetical-protein
MKEKYSVKTYELRLRALTDFCVSANQDAVVESSDYIIHDKYAYIIDSKAVFNMLKDGIISERDLEDVKEFLKNNPEYLEKYFKTRRLELARNYENMLSISRFWRYLDIKENEVTENYAVPASTIKGILNTGFLSFFLEDIEYVYARGQKARLNLKSLKVNNAQARIDNTQSLFKTFESKEDFQKGLKVFYAAQSSWEEKGYLDEIREAEDIFDSIEKSLFRTVECLDAVFKEGSFIVKKVKRLSRANNRSALPQYFELAQKGSLFAGKVQVSVPHDGEPLSSLSFLYEDSNYIEDLNVMDICIEGLKIYSKKLVKAEEKFFAQKIGSLNSQSQNFYNDLWSECERGNIVIKIGKSGIHAKSFMSFDSNNLEKNDFFPYTINIDDENKLPIGWVKLEIEEE
>CP034791.1|AZT89231.1|43990_44728_+|CRISPR-associated-endoribonuclease-Cas6
MRYKIRFYTENDMNISIHYNIELAKAVRNLLNPKYREFVDKGGFSLGKTIYKPYTFSRLFPQEYRVINSKLEIKKGYVDLIVSSIDENFWFSFLEGLLKEKKITLYGNTMCLDSFAIKKFKRKNKMIVKTLSPIMCRINLSEQTKNEFELFLKGNVVNKACVFKKRIFSLDDINLKFFENTVKETVVILNGTPNKAYSGLILLDGDEDIVEVAYFTGIGPKNALGFGCVEDIKLKNERVIYKLSL
>CP034791.1|AZT89232.1|44782_45694_+|TIGR02221-family-CRISPR-associated-protein
MGKKFLSFLGANNYTPSTYTLNILDKNDSKYAKYTQVVLLEKICNQWDEDAKGFIFVTQEAKRVNWDGGDENNQSLKREIEKLKEAGTIKFEVEAVEIPNGFSEQDIWKIFEIVVNHIEEEDEIVFDITHGYRYLPMLIVVMLSYLKTVKNINILGIYYGLFEVKDSNKPILNFTPFIDLLDLSFGVSAFLHFGDGSYLENTLLCKKDVCVKNEKQKLIQSGLDIEIAEKKIEKMFASNEWFKGINDLISFAKSLRNFTDSIFTLRGRCTQNRDESIFAAHKDLREKIEKVQNLDADISSLSN
>CP034791.1|AZT89233.1|45693_46173_+|hypothetical-protein
MVEKIKQKTQKFENADNLIVGEEVIKWCKEYSLIAEGYVALEETMITYLCRVLGVDENDSDVRKLVSAAATKKSKQKNEQIETKNIYEAETKENEKIHEMAKSIPIEIAGFIERIKAKRNSVMHFGFTKDRIGSGKIIKEFEELVEEALKLLSQTKNQV
>CP034791.1|AZT89234.1|47377_47632_-|hypothetical-protein
MIEILKNILLPQAFLMLLVAFIVLASSRIEISTFELLFERQFILFHFDQKSHLSTSGSKILKVDLYAVSKRFGMVFAKLLAVAG

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Crispr_ID: CP034791_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034791_3

36883-37354

TypeIII

Consensus_repeat	Method
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	CRISPRCasFinder
TTTCAATCCCCAAAGGGTAGGCTACAAAC	CRT
GTTTCAATCCCCAAAGGGTAGGCTACAAACTA	PILER-CR

6 spacers

cas10,csm3gr7,csm4gr5,csm5gr7,cas6,csx1

The CRISPR arrays of CP034791_3

>merge|CP034791|3|36883-37354|CRISPRCasFinder,CRT,PILER-CR
GTTTCAATTCTTAAAGAGCAGTCTACAAGCTCCCTTCCTTTCTCAATTCCCAACGGGCAGGCTACAAACGGAACTATTGTGGATATTCACACTTGTCCAGTCTGCGTTTCAATCCCCAAAGGGCAGGCTACAAACGACCTTTTTCTGCTGTTCCAAGAAGATAAATAGTAGGTTTCAATTCCCAAAGGGTAGGCTACAAACTAAATGTATGGTGCATTGGCAAGTAATGTTTCCAAGCGTTTCAATCCCCAAAGGGTAGGCTACAAACTATGGAGAAGCGAAGACAAAAATGGCAGGAGAAAGTAAAGTTTCAATCCCCAAAGGGTAGGCTACAAACTAAATAGAAGGTGATAATAGCAAGCAAAAAGAACGTGTTTCAATCCCCAAAGGGTAGGCTACAAACAACGTTGTGCGTGGGTCTATTTTGATATTACTTAGTAAATTCAATCCCCAAAGGGTAGGCTACAAACAA

>CP034791|3|3|36883-37352|CRISPRCasFinder
GTTTCAATTCTTAAAGAGCAGTCTACAAGC	TCCCTTCCTTTCTCAATTCCCAACGGGCAGGCTACAAACGGAACTATTGTGGATATTCACACTTGTCCAGTCTGC
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	GACCTTTTTCTGCTGTTCCAAGAAGATAAATAGTAG
GTTTCAATTCCCAAAGGGTAGGCTACAAAC	TAAATGTATGGTGCATTGGCAAGTAATGTTTCCAAGC
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	TATGGAGAAGCGAAGACAAAAATGGCAGGAGAAAGTAAA
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	TAAATAGAAGGTGATAATAGCAAGCAAAAAGAACGT
GTTTCAATCCCCAAAGGGTAGGCTACAAAC	AACGTTGTGCGTGGGTCTATTTTGATATTACTTAGTA
AATTCAATCCCCAAAGGGTAGGCTACAAAC

>CP034791|3|3|36923-37352|CRT
TCTCAATTCCCAACGGGCAGGCTACAAAC	GGAACTATTGTGGATATTCACACTTGTCCAGTCTGCG
TTTCAATCCCCAAAGGGCAGGCTACAAAC	GACCTTTTTCTGCTGTTCCAAGAAGATAAATAGTAGG
TTTCAATTCCCAAAGGGTAGGCTACAAAC	TAAATGTATGGTGCATTGGCAAGTAATGTTTCCAAGCG
TTTCAATCCCCAAAGGGTAGGCTACAAAC	TATGGAGAAGCGAAGACAAAAATGGCAGGAGAAAGTAAAG
TTTCAATCCCCAAAGGGTAGGCTACAAAC	TAAATAGAAGGTGATAATAGCAAGCAAAAAGAACGTG
TTTCAATCCCCAAAGGGTAGGCTACAAAC	AACGTTGTGCGTGGGTCTATTTTGATATTACTTAGTAA
ATTCAATCCCCAAAGGGTAGGCTACAAAC

>CP034791|3|3|36988-37354|PILER-CR
GTTTCAATCCCCAAAGGGCAGGCTACAAACGA	CCTTTTTCTGCTGTTCCAAGAAGATAAATAGTAG
GTTTCAATTCCCAAAGGGTAGGCTACAAACTA	AATGTATGGTGCATTGGCAAGTAATGTTTCCAAGC
GTTTCAATCCCCAAAGGGTAGGCTACAAACTA	TGGAGAAGCGAAGACAAAAATGGCAGGAGAAAGTAAA
GTTTCAATCCCCAAAGGGTAGGCTACAAACTA	AATAGAAGGTGATAATAGCAAGCAAAAAGAACGT
GTTTCAATCCCCAAAGGGTAGGCTACAAACAA	CGTTGTGCGTGGGTCTATTTTGATATTACTTAGTA
AATTCAATCCCCAAAGGGTAGGCTACAAACAA

Protein	Signature genes	Signature genes Name	Protein_function
CP034791.1\|AZT91593.1\|28868_29567_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89229.1\|41852_42788_+\|hypothetical-protein	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	unknown
CP034791.1\|AZT89227.1\|37998_40446_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
CP034791.1\|AZT89218.1\|24674_27722_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
CP034791.1\|AZT89233.1\|45693_46173_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|187863
CP034791.1\|AZT89225.1\|33913_34165_-\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89220.1\|28415_28676_-\|stage-V-sporulation-protein-S	unknown	unknown	gnl\|CDD\|377254
CP034791.1\|AZT89226.1\|35259_36651_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|224586
CP034791.1\|AZT89230.1\|42784_43987_+\|hypothetical-protein	csm5gr7	mkCas0182_csm5gr7_CAS-III-A	unknown
CP034791.1\|AZT89219.1\|27928_28324_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89223.1\|31657_32644_-\|ATP-dependent-helicase	unknown	unknown	gnl\|CDD\|223288
CP034791.1\|AZT91595.1\|47628_48588_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|368098
CP034791.1\|AZT91594.1\|41123_41825_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
CP034791.1\|AZT89224.1\|33537_33930_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350250
CP034791.1\|AZT89232.1\|44782_45694_+\|TIGR02221-family-CRISPR-associated-protein	csx1	cd09732_csx1_CAS-III	gnl\|CDD\|378186
CP034791.1\|AZT89222.1\|30213_31029_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89234.1\|47377_47632_-\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89228.1\|40454_41075_+\|type-III-A-CRISPR-associated-protein-Csm2	unknown	unknown	gnl\|CDD\|367635
CP034791.1\|AZT89231.1\|43990_44728_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|187783
CP034791.1\|AZT89221.1\|29609_30119_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP034791.1\|AZT89218.1\|24674_27722_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	1.95141e-105
CP034791.1\|AZT89233.1\|45693_46173_+\|hypothetical-protein	gnl\|CDD\|187863	cd09732, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as TM1812 family.	0.00605887
CP034791.1\|AZT89220.1\|28415_28676_-\|stage-V-sporulation-protein-S	gnl\|CDD\|377254	pfam04232, SpoVS, Stage V sporulation protein S (SpoVS). In Bacillus subtilis this protein interferes with sporulation at an early stage and this inhibitory effect is overcome by SpoIIB and SpoVG. SpoVS seems to play a positive role in allowing progression beyond stage V of sporulation. Null mutations in the spoVS gene block sporulation at stage V, impairing the development of heat resistance and coat assembly.	6.53583e-36
CP034791.1\|AZT89226.1\|35259_36651_+\|ATP-binding-protein	gnl\|CDD\|224586	COG1672, COG1672, Predicted ATPase (AAA+ superfamily) [General function prediction only].	4.96603e-31
CP034791.1\|AZT89223.1\|31657_32644_-\|ATP-dependent-helicase	gnl\|CDD\|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	1.01949e-12
CP034791.1\|AZT91595.1\|47628_48588_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|368098	pfam04754, Transposase_31, Putative transposase, YhgA-like. This family of putative transposases includes the YhgA sequence from Escherichia coli and several prokaryotic homologs.	2.10988e-21
CP034791.1\|AZT91594.1\|41123_41825_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	2.99236e-79
CP034791.1\|AZT89224.1\|33537_33930_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350250	cd18683, PIN_VapC-like, Uncharacterized subfamily of the VapC (virulence-associated protein C)-like family of the PIN domain superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	3.97711e-25
CP034791.1\|AZT89227.1\|37998_40446_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	7.89848e-58
CP034791.1\|AZT89232.1\|44782_45694_+\|TIGR02221-family-CRISPR-associated-protein	gnl\|CDD\|378186	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. The family describes Cas proteins of about 400 residues that include the motif [VIL]-D-x-[ST]-H-[GS]. The CRISPR and associated proteins are thought to be involved in the evolution of host resistance. The exact molecular function of this family is currently unknown.	3.86442e-55
CP034791.1\|AZT89231.1\|43990_44728_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	3.21402e-18
CP034791.1\|AZT89228.1\|40454_41075_+\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	0.000206843

>CP034791.1|AZT89226.1|35259_36651_+|ATP-binding-protein
MKKFINRKQELDFLEKQYQEQKSSLVVIYGRRRIGKTALIKKFIEDKPAIYFLGSEEVESQNIEYFKRAVSSFLKNPLIEKLSGISWDDIFDILVKTKSDKKMVIVFDEFQNLCKTNPAFASILQRIWDEKLKSGNFMLILCGSLISMMQEYALSYSSPLYGRRTGQIKLKQFSFKEAKEFFPDASDDEFIWIYSVVGGVPKYLEMFKYEGDIYKAIEENILSRQSFLYEEPLFLLEKEVHEIGSYFSIIKSIALGNHKLSQIAQSLSVPQTKLTKYLNTLIELDIIRREVPITEEYPEKSKRGLYFINDNFINFWFKFVYPYREQLELDNIEYVIENIRSKIVASHISYVYEEVCKQILSDLIRSKKMDVHVDKIGKWWDGKSEIDIVGIGRSMRHVVFGECKYSQNMADIDVFFDLKKKAENVKVFPDQKEFYVLFSRAGFSERLLEYAEEAKNLFLIKFP
>CP034791.1|AZT89225.1|33913_34165_-|hypothetical-protein
MIIRKIVNGYQLEKIVDIPEAAKNMPVELIVRIPLNKRKKSKKGDEILNELSGVFGKYKNPNLIPSEEEAWKNTVREIYEKEQ
>CP034791.1|AZT89224.1|33537_33930_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MRKNNKKILKLIDANVILRFLLNDIAELNQIAKEIIKNNEVLILNEVVAEIVYVLEKVYKVERKNICNTLIKLFNHPNIFVQDLEMLTEAFKFYADKSIDFVDAILVAQNKCKGYTVYTFDKKLEKHLHS
>CP034791.1|AZT89223.1|31657_32644_-|ATP-dependent-helicase
MAIHRLVYLLNEYCFAPDAKILMVTFNKTLVNFLKYLYNKLDEEISLSFDALVNDNKDKVKICSIDSIIYGYFQEYKESSGCNLELVNNKTVKYNFINRAIIKLKDKYPKVQYIDLAFANFLLDEIEWIKACNIRKLEEYQSTDRIGRTATSQKDVPQKIAKNSETKKAIFELMQLYTQLLKENGLVDFKDMALIALDYLKENEHRIPKYTHIIIDESQDLTRTQLEIIKLFYNSEKSYSSIMFIADTAQSIYTHSWLVRGRSFASIGFDMTGKSYILSKNYRTTVQIANLAYSLIEKTPEIIEDENFVKPALIDKQGPFTRAKNLSK
>CP034791.1|AZT89222.1|30213_31029_+|hypothetical-protein
MEKRKDKDKFSVNTSNKETILDFVERKLSENASIRELMKDEFVRFTSIRDFLYFKFCPGYFGMCPNSKNKKDKMCNPANCWERRFAALFPYGFDNDYIFYYNLVKDTITPSICYSCGSSNVELEWQDEGYLAKIGLINFADIAYVRCNSCKKKYMSHADNLAIEFIVKLFLAKPSKRSPIKPGQTVVLPKDKVGLEIFIKHLNETKDIKTVWQKLDPFSVANQFGELDLSLATSDFLCDYYNIDYSTEDDISLENFEDIDIKDLFDDFEDK
>CP034791.1|AZT89221.1|29609_30119_+|hypothetical-protein
MTITFFSEAVLENFKDIFGDVKIGMFTEISPTFEVFIDNLIQALKSMNLNIKKEIVDDIIIEIKQVQVHYMGSSKNVTDVLRKLTFLYQRDFLECMVKCNVFLKSRADTTFAVKNLEVKYKPLQRYNDTVRTLAKEVLEYLPLRDMLEKDFEYTKKALEWIEDNGVVSS
>CP034791.1|AZT91593.1|28868_29567_+|hypothetical-protein
MFKGVGEILAFSNFLNTVIQKNNWIYTKEFLEKLRIPIPTEQQLKNFDIANAFYKEFLYIVYSPDIISMLNSMKIWGANNNFDIFTDLTLDMIPIVWLGEGYYGIVEKNKERIIMPCALYQYFDDLYKNFPVSNFSVLDICEAYKRLFESEENVAMNIVYAKTIEDLKREFSKNFKDFDILFEGPGYYDLYFSPVSKRYIVAPIREILKKMFEIQLVYFHKLLNVHDRFKEK
>CP034791.1|AZT89220.1|28415_28676_-|stage-V-sporulation-protein-S
MEVLKVAASSMPQKVANALAAIVKEQGEAELQAVGASAVNQAVKAIAIARGKVAPNGIDLYVIPAFADILIDGEKKTAIKFIVKSR
>CP034791.1|AZT89219.1|27928_28324_+|hypothetical-protein
MGYINTNLQEVVDIVLKNISLSELVKEIDVTGSEIRVKIKPVSILPEIALKFTITSEAEKIVVLFDPAKSVIIYGFLLGKLKDEQIPGITLFKEGLEIDLQKLLLQNIKGIKIQNVFVTSSGEIKIDFSCG
>CP034791.1|AZT89218.1|24674_27722_+|EAL-domain-containing-protein
MKRTLKVIIISILLFLFTSQVAYCYHKTIKFQVDKQYPPFSYVINGRVYGFSVDLANLIFEPDKYFLSVSSDTWENVYKRLVSGEIDITGPIVILEERKKGVYFTDPIFTRHVGIYTRKDFNKDITLNNLASFKIGVMKSDYTETLLKERLKIKNYLTFQTIEDEFVALLEGKVDAVIISQEIANYFLVKNNYADQVEIKLKDIFILESGFGISKKHPELVDYVNTRLKELIKNGIFDQLYYNYFSTYSPYYYEKKNREVVFSILYILFIIIFASSITIFVMRGINKRLQQGKEAYEKYAELLASNANVIVLTLNLKGEIIYFNRFAEEVTGYKREEVIGKRWVDIFIPEHKREYIEKLFSEIAEKKVLNNFENEIITKTGDVCWIIWNNVVVESPYLNEPLIISTGLDITPIKKNQRLLEESYEELEETNQELVNTLEILNKQTELLKEEEERYKFIVENISDCIWEFDVAEKRIEFYGNLKDYFETDKINPKIDYYAWLELYHPDDIKALMEKIQRAFELRDEKIEYEARIKDKNGNYKWVSVHIKVFYDNRGKPEKLIGINIDYSAKKEYEDRIKYLAYYDDLTNLPNRKLFENKLSELIKKAAQTGKIGAVILIDIDNFKDINDLYGHEVGDEYLRTISQKIAEYLKGLEVQNYFSRVGGDEFAIILNGLEKKDFVIEVCTEIQKIFENEIFLEKIERGLYTTVSMGISFYPEDGRDSKEILRNVDMALSLAKENGKNDFQIFMPFLLLKNLNKIEIEKNLRKAIENDEFVLYYQPVVNLENMEIHSVEALIRWFLPQKGMVSPLEFIPVAEESGLIVRIGEVVIEKALRDLRDWERKGINDIHIAINLSARQFKTKYFENTVAKLLEKYSVDPVKVSFEITETGAVENFDVSLKILGFLCQMGIKFLIDDFGTGYSSLIYLRKLPISGVKIDKSFISELMFSKESRAIVEGIILMAHKLGLKVVAEGIENKKELEILKEIGCDFGQGYLFSKPIPKEEVEKLLLQKKVLM
>CP034791.1|AZT89227.1|37998_40446_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MCLGKETYRNLIAVTALLHDIGKFIRRSGLGSLSHQEESKKFLEKYMEKFRNKNLFTNQELELIKRLIENHHNIEKINKSSACSDAENNLLKILIYSDWDSASERRQEKETSGSQEYVPIHSILSFINEAFDIDEALRQGEEDKIFEHISYVRAFSPQDAFVYERPELNPAHPVVEDNRKRFEIFESEFKTLIEESKNQYEFVLRLNYILKKHTTYITSSGKEKIRDISLYHHSATTAMFAINRLIDFEHGEQIEQRKQYGAVYGRLFKIQDYIFSGINSKIEKPLKRIITRSQLVSILNMLIPYDIVKTLDLYPFNIIFYGGGAFLILIPLSYISKAQERIKEIKKTVDEIFESKIYFEAVYERISVYENGYVLGNELKSLGEKLSEKKFARSFDTIAPFIHEKYFEKAYFKCENCKINSSKTILSGENFVCKCCQVEEKWMNEDITKLKFLFDRLYVENIQDPELLSAGADSNSALVLTFTKSEAENRKCIDTFLQGRKFIYTADFCQRCPEYDDCAEPYKHILSEEDERLTMKLASLDCLEKMSDSDNIIATAKMDIDDLGFILYSIYPIKVLQNESYPFSITRLSYASWLLNLFFTEGVKKVINEKFKDDVMILYSGGDDLLLTGVWYKVIEAIDEIEKEFSQFVTGKVIDRKNVTVTASIYFHRAHENFDSVLIKLNEGLEEAKKIKNRVFLFDNVISYPELRRSLDISKKIVDYVNEKVLGKLIIRKLLRILEWRKLRNCYQEIKATSHYVYLKTRLIENNKNLSEDKKKEVIEFLDSFMSLHTDNSNVSMAIVAINIALRKLIKESEE
>CP034791.1|AZT89228.1|40454_41075_+|type-III-A-CRISPR-associated-protein-Csm2
MPRPNNLPHRGNNRNAQNRTATSQNQRSSTLIIDEDKQRELEQNKHDLFELIKDDNGFCDEHGIRYEVAEKIEKFAEYLNAAYVQNDSDVGVTSSSIRNIYDNYISIKRKFQTVQLEQREIEDAETRKENAFMKIKPELIFVKSKVNYTVERKLKEERNEAKKQIKELSYNALKEFINISTTKITTSYNQFEAFIKIFETLVGFMK
>CP034791.1|AZT91594.1|41123_41825_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MLLKQIIVLKTIMKIKTGLRIGGSREELKIGDIDNPVIRDPLTNEPYIPGSSLKGKMRSSLEITLKGTKDPCNCGNCPICVLFGAAKNKPQSGEKEVTRLIVRDSFMTEKSKKLLLDFVGDYVEIKKENVINRVTGVAKDPRTLDRIPAGTEFECEFVLRIYQKDQEKVEEYIKYIETALTLIELTYLGGSGTRGYGKVEFGENGNKIIEKKVYEIVKSEDGFVKVEEKSEDS
>CP034791.1|AZT89229.1|41852_42788_+|hypothetical-protein
MIYRADFLISSSSSKLISPVIFGAIADKVFELTEEKQAKELVFDMAQNVLISDALPSEEEEDDFIRYFYVPRIIPPYEDDQNSLSLRERRELARKNKKLAKSVSLVEIDNSGILKEADPSKVKDPVDFYRIGIQVNRKSAASEVGIFFYHQEFRFSKKQCYSIYIQCKKPSLVNKIEECFKVIELTGFGPDVSIGKGKISFLRHNQRILCRDEVTEQFFDSEPDVEKEYVNIASTILFDKAVSACQFKSYQTFRYDSKGYGVFKPPYFCAERSSVVVPKGKDLSFLIEYKGRFIYTCIFPLRLIQIGGEKI
>CP034791.1|AZT89230.1|42784_43987_+|hypothetical-protein
MKEKYSVKTYELRLRALTDFCVSANQDAVVESSDYIIHDKYAYIIDSKAVFNMLKDGIISERDLEDVKEFLKNNPEYLEKYFKTRRLELARNYENMLSISRFWRYLDIKENEVTENYAVPASTIKGILNTGFLSFFLEDIEYVYARGQKARLNLKSLKVNNAQARIDNTQSLFKTFESKEDFQKGLKVFYAAQSSWEEKGYLDEIREAEDIFDSIEKSLFRTVECLDAVFKEGSFIVKKVKRLSRANNRSALPQYFELAQKGSLFAGKVQVSVPHDGEPLSSLSFLYEDSNYIEDLNVMDICIEGLKIYSKKLVKAEEKFFAQKIGSLNSQSQNFYNDLWSECERGNIVIKIGKSGIHAKSFMSFDSNNLEKNDFFPYTINIDDENKLPIGWVKLEIEEE
>CP034791.1|AZT89231.1|43990_44728_+|CRISPR-associated-endoribonuclease-Cas6
MRYKIRFYTENDMNISIHYNIELAKAVRNLLNPKYREFVDKGGFSLGKTIYKPYTFSRLFPQEYRVINSKLEIKKGYVDLIVSSIDENFWFSFLEGLLKEKKITLYGNTMCLDSFAIKKFKRKNKMIVKTLSPIMCRINLSEQTKNEFELFLKGNVVNKACVFKKRIFSLDDINLKFFENTVKETVVILNGTPNKAYSGLILLDGDEDIVEVAYFTGIGPKNALGFGCVEDIKLKNERVIYKLSL
>CP034791.1|AZT89232.1|44782_45694_+|TIGR02221-family-CRISPR-associated-protein
MGKKFLSFLGANNYTPSTYTLNILDKNDSKYAKYTQVVLLEKICNQWDEDAKGFIFVTQEAKRVNWDGGDENNQSLKREIEKLKEAGTIKFEVEAVEIPNGFSEQDIWKIFEIVVNHIEEEDEIVFDITHGYRYLPMLIVVMLSYLKTVKNINILGIYYGLFEVKDSNKPILNFTPFIDLLDLSFGVSAFLHFGDGSYLENTLLCKKDVCVKNEKQKLIQSGLDIEIAEKKIEKMFASNEWFKGINDLISFAKSLRNFTDSIFTLRGRCTQNRDESIFAAHKDLREKIEKVQNLDADISSLSN
>CP034791.1|AZT89233.1|45693_46173_+|hypothetical-protein
MVEKIKQKTQKFENADNLIVGEEVIKWCKEYSLIAEGYVALEETMITYLCRVLGVDENDSDVRKLVSAAATKKSKQKNEQIETKNIYEAETKENEKIHEMAKSIPIEIAGFIERIKAKRNSVMHFGFTKDRIGSGKIIKEFEELVEEALKLLSQTKNQV
>CP034791.1|AZT89234.1|47377_47632_-|hypothetical-protein
MIEILKNILLPQAFLMLLVAFIVLASSRIEISTFELLFERQFILFHFDQKSHLSTSGSKILKVDLYAVSKRFGMVFAKLLAVAG
>CP034791.1|AZT91595.1|47628_48588_-|Rpn-family-recombination-promoting-nuclease/putative-transposase
MNNNQLPHNINDLEYKYIFSNKSIFLRLLKRLDEIGIFKNLTEDQLERIDKSYVLPDFSQEESDLLYKVSLKEKEIIFYILFEHQSSVDHSMPLRLLFYITDIYRDYIKDFDRGEIKKKGFTLPAVVPIVFYDGEDRWTAARRLKEKILGFEEFGNCVIDFEYILIDLNQAESILQVKDILSLILKLNRIKRYEELERLILELGEYLLGAEEKEIEVLKVCLPAALRELDEIEVEAAKRAIDESVRGGEKVMPLFQNLRKIKEELIFEGLQQGLQQGFEQSRIETAERMILKGYKDEEIAEITGLSLERIKELRVKHRN

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Crispr_ID: CP034791_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034791_4

46297-47247

TypeIII

Consensus_repeat	Method
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	CRISPRCasFinder
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	CRT
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	PILER-CR

14 spacers

csx1,cas6,csm5gr7,csm4gr5,csm3gr7,cas10

The CRISPR arrays of CP034791_4

>merge|CP034791|4|46297-47247|CRISPRCasFinder,CRT,PILER-CR
CCTTAAATCCCCAAAGGGCAGGCTACAAACATGAAGATTTAAACGACTATTCGATTGTGCTGAAAGTGTTTCAATCCCCAAAGGGCAGGCTGCAAACCGAATTAGAGTACAGGGTTGGAACATTGGTGCAACCGTTTCAATCCCCAAAGGGCAGGCTACAAACAAATCAATATTTGTCTTCTTCTTTTTATGTTTGTAGGTTTCAATCCCCAAAGGGCAGGCTACAAACTTGTTGAATGGTAAGTATTGGTTATGTACTAAATAGTTTCAATCCCCAAAGGGAAGGCTACAAACCGTGGGCGGGGCGGCTGAGGGCAAGAAAAGAAGAAGTTTCAATCCCCAAAGGGAAGGCTACAAACACAAGAGGCAGACCTCTTACCCTGGCACGTCTTGAGTTTCAATCCCCAAAGGGAAGGCTACAAACCCAGAGAGTGATTTTGGACAGGCAGCAGCAAAGAAAGTTTCAATCCCCAAAGGGAAGGCTACAAACAAAGATTGAGAATCACATTATTGACATTAAAAGAATGTTTCAATCCCCAAAGGGAAGGCTACAAACCTTTGATGGGTGGCGTTGCAACGTCACTAATCATGTGTTTCAATCCCCAAAGGGAAGGCTACAAACCCGCTAACATGAAAAAGGAGGCAGTTTTAAATGGTTTCAATCCCCAAAGGGAAGGCTACAAACACAACTACACCATACAACTTGGGTTGGTTAAAGACGTTTCAATCCCCAAAGGGAAGGCTACAAACAAAAACATGCGAAGGAGGAGATACTCAATGACTAAACAGTTTCAATCCCCAAAGGGAAGGCTACAAACATAGCTTTTAAAAGTCCTAAGTAGCCTTCTTGAATCGTTTCAATCCCCAAAGGGAAGGCTACAAACCAGATTTATCACAATGGGGGAAAATTCCTTATTTAAAGTTTCAATCCCCAAAGGGAAGGCTACAAAC

>CP034791|4|4|46297-47247|CRISPRCasFinder
CCTTAAATCCCCAAAGGGCAGGCTACAAAC	ATGAAGATTTAAACGACTATTCGATTGTGCTGAAAGT
GTTTCAATCCCCAAAGGGCAGGCTGCAAAC	CGAATTAGAGTACAGGGTTGGAACATTGGTGCAACC
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	AAATCAATATTTGTCTTCTTCTTTTTATGTTTGTAG
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	TTGTTGAATGGTAAGTATTGGTTATGTACTAAATA
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	CGTGGGCGGGGCGGCTGAGGGCAAGAAAAGAAGAA
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	ACAAGAGGCAGACCTCTTACCCTGGCACGTCTTGA
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	CCAGAGAGTGATTTTGGACAGGCAGCAGCAAAGAAA
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	AAAGATTGAGAATCACATTATTGACATTAAAAGAAT
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	CTTTGATGGGTGGCGTTGCAACGTCACTAATCATGT
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	CCGCTAACATGAAAAAGGAGGCAGTTTTAAATG
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	ACAACTACACCATACAACTTGGGTTGGTTAAAGAC
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	AAAAACATGCGAAGGAGGAGATACTCAATGACTAAACA
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	ATAGCTTTTAAAAGTCCTAAGTAGCCTTCTTGAATC
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	CAGATTTATCACAATGGGGGAAAATTCCTTATTTAAA
GTTTCAATCCCCAAAGGGAAGGCTACAAAC

>CP034791|4|4|46297-47247|CRT
CCTTAAATCCCCAAAGGGCAGGCTACAAAC	ATGAAGATTTAAACGACTATTCGATTGTGCTGAAAGT
GTTTCAATCCCCAAAGGGCAGGCTGCAAAC	CGAATTAGAGTACAGGGTTGGAACATTGGTGCAACC
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	AAATCAATATTTGTCTTCTTCTTTTTATGTTTGTAG
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	TTGTTGAATGGTAAGTATTGGTTATGTACTAAATA
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	CGTGGGCGGGGCGGCTGAGGGCAAGAAAAGAAGAA
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	ACAAGAGGCAGACCTCTTACCCTGGCACGTCTTGA
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	CCAGAGAGTGATTTTGGACAGGCAGCAGCAAAGAAA
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	AAAGATTGAGAATCACATTATTGACATTAAAAGAAT
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	CTTTGATGGGTGGCGTTGCAACGTCACTAATCATGT
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	CCGCTAACATGAAAAAGGAGGCAGTTTTAAATG
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	ACAACTACACCATACAACTTGGGTTGGTTAAAGAC
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	AAAAACATGCGAAGGAGGAGATACTCAATGACTAAACA
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	ATAGCTTTTAAAAGTCCTAAGTAGCCTTCTTGAATC
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	CAGATTTATCACAATGGGGGAAAATTCCTTATTTAAA
GTTTCAATCCCCAAAGGGAAGGCTACAAAC

>CP034791|4|4|46299-47247|PILER-CR
TTAAATCCCCAAAGGGCAGGCTACAAACAT	GAAGATTTAAACGACTATTCGATTGTGCTGAAAGTGT
TTCAATCCCCAAAGGGCAGGCTGCAAACCG	AATTAGAGTACAGGGTTGGAACATTGGTGCAACCGT
TTCAATCCCCAAAGGGCAGGCTACAAACAA	ATCAATATTTGTCTTCTTCTTTTTATGTTTGTAGGT
TTCAATCCCCAAAGGGCAGGCTACAAACTT	GTTGAATGGTAAGTATTGGTTATGTACTAAATAGT
TTCAATCCCCAAAGGGAAGGCTACAAACCG	TGGGCGGGGCGGCTGAGGGCAAGAAAAGAAGAAGT
TTCAATCCCCAAAGGGAAGGCTACAAACAC	AAGAGGCAGACCTCTTACCCTGGCACGTCTTGAGT
TTCAATCCCCAAAGGGAAGGCTACAAACCC	AGAGAGTGATTTTGGACAGGCAGCAGCAAAGAAAGT
TTCAATCCCCAAAGGGAAGGCTACAAACAA	AGATTGAGAATCACATTATTGACATTAAAAGAATGT
TTCAATCCCCAAAGGGAAGGCTACAAACCT	TTGATGGGTGGCGTTGCAACGTCACTAATCATGTGT
TTCAATCCCCAAAGGGAAGGCTACAAACCC	GCTAACATGAAAAAGGAGGCAGTTTTAAATGGT
TTCAATCCCCAAAGGGAAGGCTACAAACAC	AACTACACCATACAACTTGGGTTGGTTAAAGACGT
TTCAATCCCCAAAGGGAAGGCTACAAACAA	AAACATGCGAAGGAGGAGATACTCAATGACTAAACAGT
TTCAATCCCCAAAGGGAAGGCTACAAACAT	AGCTTTTAAAAGTCCTAAGTAGCCTTCTTGAATCGT
TTCAATCCCCAAAGGGAAGGCTACAAACCA	GATTTATCACAATGGGGGAAAATTCCTTATTTAAAGT
TTCAATCCCCAAAGGGAAGGCTACAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP034791.1\|AZT89230.1\|42784_43987_+\|hypothetical-protein	csm5gr7	mkCas0182_csm5gr7_CAS-III-A	unknown
CP034791.1\|AZT89226.1\|35259_36651_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|224586
CP034791.1\|AZT89237.1\|56041_57460_+\|TIGR01897-family-CRISPR-associated-protein	csx1	cd09728_csx1_CAS-III	gnl\|CDD\|187859
CP034791.1\|AZT89233.1\|45693_46173_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|187863
CP034791.1\|AZT89225.1\|33913_34165_-\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89236.1\|54169_55456_+\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376564
CP034791.1\|AZT89240.1\|62913_64299_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|367293
CP034791.1\|AZT89229.1\|41852_42788_+\|hypothetical-protein	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	unknown
CP034791.1\|AZT91596.1\|50928_52026_+\|DUF1848-domain-containing-protein	unknown	unknown	gnl\|CDD\|378091
CP034791.1\|AZT89234.1\|47377_47632_-\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT91595.1\|47628_48588_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|368098
CP034791.1\|AZT91594.1\|41123_41825_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
CP034791.1\|AZT89239.1\|59753_60479_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368098
CP034791.1\|AZT89227.1\|37998_40446_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
CP034791.1\|AZT89235.1\|49973_50924_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89232.1\|44782_45694_+\|TIGR02221-family-CRISPR-associated-protein	csx1	cd09732_csx1_CAS-III	gnl\|CDD\|378186
CP034791.1\|AZT91597.1\|64762_65002_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89238.1\|58489_59719_-\|IS256-like-element-ISCsa2-family-transposase	unknown	unknown	gnl\|CDD\|307151
CP034791.1\|AZT89231.1\|43990_44728_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|187783
CP034791.1\|AZT89228.1\|40454_41075_+\|type-III-A-CRISPR-associated-protein-Csm2	unknown	unknown	gnl\|CDD\|367635

Protein	Function_ID	Function_description	E-value
CP034791.1\|AZT89237.1\|56041_57460_+\|TIGR01897-family-CRISPR-associated-protein	gnl\|CDD\|187859	cd09728, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as DxTHG family.	5.26568e-41
CP034791.1\|AZT89233.1\|45693_46173_+\|hypothetical-protein	gnl\|CDD\|187863	cd09732, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as TM1812 family.	0.00605887
CP034791.1\|AZT89236.1\|54169_55456_+\|IS110-family-transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	2.93066e-28
CP034791.1\|AZT89226.1\|35259_36651_+\|ATP-binding-protein	gnl\|CDD\|224586	COG1672, COG1672, Predicted ATPase (AAA+ superfamily) [General function prediction only].	4.96603e-31
CP034791.1\|AZT91596.1\|50928_52026_+\|DUF1848-domain-containing-protein	gnl\|CDD\|378091	pfam08902, DUF1848, Domain of unknown function (DUF1848). This family of proteins are functionally uncharacterized. The C-terminus contains a cluster of cysteines that are similar to the iron-sulfur cluster found at the N-terminus of pfam04055.	2.10467e-146
CP034791.1\|AZT91595.1\|47628_48588_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|368098	pfam04754, Transposase_31, Putative transposase, YhgA-like. This family of putative transposases includes the YhgA sequence from Escherichia coli and several prokaryotic homologs.	2.10988e-21
CP034791.1\|AZT91594.1\|41123_41825_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	2.99236e-79
CP034791.1\|AZT89239.1\|59753_60479_-\|hypothetical-protein	gnl\|CDD\|368098	pfam04754, Transposase_31, Putative transposase, YhgA-like. This family of putative transposases includes the YhgA sequence from Escherichia coli and several prokaryotic homologs.	8.55991e-21
CP034791.1\|AZT89227.1\|37998_40446_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	7.89848e-58
CP034791.1\|AZT89238.1\|58489_59719_-\|IS256-like-element-ISCsa2-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	5.33536e-63
CP034791.1\|AZT89232.1\|44782_45694_+\|TIGR02221-family-CRISPR-associated-protein	gnl\|CDD\|378186	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. The family describes Cas proteins of about 400 residues that include the motif [VIL]-D-x-[ST]-H-[GS]. The CRISPR and associated proteins are thought to be involved in the evolution of host resistance. The exact molecular function of this family is currently unknown.	3.86442e-55
CP034791.1\|AZT89240.1\|62913_64299_+\|ATP-binding-protein	gnl\|CDD\|367293	pfam03008, DUF234, Archaea bacterial proteins of unknown function.	2.04672e-31
CP034791.1\|AZT89231.1\|43990_44728_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	3.21402e-18
CP034791.1\|AZT89228.1\|40454_41075_+\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	0.000206843

>CP034791.1|AZT89233.1|45693_46173_+|hypothetical-protein
MVEKIKQKTQKFENADNLIVGEEVIKWCKEYSLIAEGYVALEETMITYLCRVLGVDENDSDVRKLVSAAATKKSKQKNEQIETKNIYEAETKENEKIHEMAKSIPIEIAGFIERIKAKRNSVMHFGFTKDRIGSGKIIKEFEELVEEALKLLSQTKNQV
>CP034791.1|AZT89232.1|44782_45694_+|TIGR02221-family-CRISPR-associated-protein
MGKKFLSFLGANNYTPSTYTLNILDKNDSKYAKYTQVVLLEKICNQWDEDAKGFIFVTQEAKRVNWDGGDENNQSLKREIEKLKEAGTIKFEVEAVEIPNGFSEQDIWKIFEIVVNHIEEEDEIVFDITHGYRYLPMLIVVMLSYLKTVKNINILGIYYGLFEVKDSNKPILNFTPFIDLLDLSFGVSAFLHFGDGSYLENTLLCKKDVCVKNEKQKLIQSGLDIEIAEKKIEKMFASNEWFKGINDLISFAKSLRNFTDSIFTLRGRCTQNRDESIFAAHKDLREKIEKVQNLDADISSLSN
>CP034791.1|AZT89231.1|43990_44728_+|CRISPR-associated-endoribonuclease-Cas6
MRYKIRFYTENDMNISIHYNIELAKAVRNLLNPKYREFVDKGGFSLGKTIYKPYTFSRLFPQEYRVINSKLEIKKGYVDLIVSSIDENFWFSFLEGLLKEKKITLYGNTMCLDSFAIKKFKRKNKMIVKTLSPIMCRINLSEQTKNEFELFLKGNVVNKACVFKKRIFSLDDINLKFFENTVKETVVILNGTPNKAYSGLILLDGDEDIVEVAYFTGIGPKNALGFGCVEDIKLKNERVIYKLSL
>CP034791.1|AZT89230.1|42784_43987_+|hypothetical-protein
MKEKYSVKTYELRLRALTDFCVSANQDAVVESSDYIIHDKYAYIIDSKAVFNMLKDGIISERDLEDVKEFLKNNPEYLEKYFKTRRLELARNYENMLSISRFWRYLDIKENEVTENYAVPASTIKGILNTGFLSFFLEDIEYVYARGQKARLNLKSLKVNNAQARIDNTQSLFKTFESKEDFQKGLKVFYAAQSSWEEKGYLDEIREAEDIFDSIEKSLFRTVECLDAVFKEGSFIVKKVKRLSRANNRSALPQYFELAQKGSLFAGKVQVSVPHDGEPLSSLSFLYEDSNYIEDLNVMDICIEGLKIYSKKLVKAEEKFFAQKIGSLNSQSQNFYNDLWSECERGNIVIKIGKSGIHAKSFMSFDSNNLEKNDFFPYTINIDDENKLPIGWVKLEIEEE
>CP034791.1|AZT89229.1|41852_42788_+|hypothetical-protein
MIYRADFLISSSSSKLISPVIFGAIADKVFELTEEKQAKELVFDMAQNVLISDALPSEEEEDDFIRYFYVPRIIPPYEDDQNSLSLRERRELARKNKKLAKSVSLVEIDNSGILKEADPSKVKDPVDFYRIGIQVNRKSAASEVGIFFYHQEFRFSKKQCYSIYIQCKKPSLVNKIEECFKVIELTGFGPDVSIGKGKISFLRHNQRILCRDEVTEQFFDSEPDVEKEYVNIASTILFDKAVSACQFKSYQTFRYDSKGYGVFKPPYFCAERSSVVVPKGKDLSFLIEYKGRFIYTCIFPLRLIQIGGEKI
>CP034791.1|AZT91594.1|41123_41825_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MLLKQIIVLKTIMKIKTGLRIGGSREELKIGDIDNPVIRDPLTNEPYIPGSSLKGKMRSSLEITLKGTKDPCNCGNCPICVLFGAAKNKPQSGEKEVTRLIVRDSFMTEKSKKLLLDFVGDYVEIKKENVINRVTGVAKDPRTLDRIPAGTEFECEFVLRIYQKDQEKVEEYIKYIETALTLIELTYLGGSGTRGYGKVEFGENGNKIIEKKVYEIVKSEDGFVKVEEKSEDS
>CP034791.1|AZT89228.1|40454_41075_+|type-III-A-CRISPR-associated-protein-Csm2
MPRPNNLPHRGNNRNAQNRTATSQNQRSSTLIIDEDKQRELEQNKHDLFELIKDDNGFCDEHGIRYEVAEKIEKFAEYLNAAYVQNDSDVGVTSSSIRNIYDNYISIKRKFQTVQLEQREIEDAETRKENAFMKIKPELIFVKSKVNYTVERKLKEERNEAKKQIKELSYNALKEFINISTTKITTSYNQFEAFIKIFETLVGFMK
>CP034791.1|AZT89227.1|37998_40446_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MCLGKETYRNLIAVTALLHDIGKFIRRSGLGSLSHQEESKKFLEKYMEKFRNKNLFTNQELELIKRLIENHHNIEKINKSSACSDAENNLLKILIYSDWDSASERRQEKETSGSQEYVPIHSILSFINEAFDIDEALRQGEEDKIFEHISYVRAFSPQDAFVYERPELNPAHPVVEDNRKRFEIFESEFKTLIEESKNQYEFVLRLNYILKKHTTYITSSGKEKIRDISLYHHSATTAMFAINRLIDFEHGEQIEQRKQYGAVYGRLFKIQDYIFSGINSKIEKPLKRIITRSQLVSILNMLIPYDIVKTLDLYPFNIIFYGGGAFLILIPLSYISKAQERIKEIKKTVDEIFESKIYFEAVYERISVYENGYVLGNELKSLGEKLSEKKFARSFDTIAPFIHEKYFEKAYFKCENCKINSSKTILSGENFVCKCCQVEEKWMNEDITKLKFLFDRLYVENIQDPELLSAGADSNSALVLTFTKSEAENRKCIDTFLQGRKFIYTADFCQRCPEYDDCAEPYKHILSEEDERLTMKLASLDCLEKMSDSDNIIATAKMDIDDLGFILYSIYPIKVLQNESYPFSITRLSYASWLLNLFFTEGVKKVINEKFKDDVMILYSGGDDLLLTGVWYKVIEAIDEIEKEFSQFVTGKVIDRKNVTVTASIYFHRAHENFDSVLIKLNEGLEEAKKIKNRVFLFDNVISYPELRRSLDISKKIVDYVNEKVLGKLIIRKLLRILEWRKLRNCYQEIKATSHYVYLKTRLIENNKNLSEDKKKEVIEFLDSFMSLHTDNSNVSMAIVAINIALRKLIKESEE
>CP034791.1|AZT89226.1|35259_36651_+|ATP-binding-protein
MKKFINRKQELDFLEKQYQEQKSSLVVIYGRRRIGKTALIKKFIEDKPAIYFLGSEEVESQNIEYFKRAVSSFLKNPLIEKLSGISWDDIFDILVKTKSDKKMVIVFDEFQNLCKTNPAFASILQRIWDEKLKSGNFMLILCGSLISMMQEYALSYSSPLYGRRTGQIKLKQFSFKEAKEFFPDASDDEFIWIYSVVGGVPKYLEMFKYEGDIYKAIEENILSRQSFLYEEPLFLLEKEVHEIGSYFSIIKSIALGNHKLSQIAQSLSVPQTKLTKYLNTLIELDIIRREVPITEEYPEKSKRGLYFINDNFINFWFKFVYPYREQLELDNIEYVIENIRSKIVASHISYVYEEVCKQILSDLIRSKKMDVHVDKIGKWWDGKSEIDIVGIGRSMRHVVFGECKYSQNMADIDVFFDLKKKAENVKVFPDQKEFYVLFSRAGFSERLLEYAEEAKNLFLIKFP
>CP034791.1|AZT89225.1|33913_34165_-|hypothetical-protein
MIIRKIVNGYQLEKIVDIPEAAKNMPVELIVRIPLNKRKKSKKGDEILNELSGVFGKYKNPNLIPSEEEAWKNTVREIYEKEQ
>CP034791.1|AZT89234.1|47377_47632_-|hypothetical-protein
MIEILKNILLPQAFLMLLVAFIVLASSRIEISTFELLFERQFILFHFDQKSHLSTSGSKILKVDLYAVSKRFGMVFAKLLAVAG
>CP034791.1|AZT91595.1|47628_48588_-|Rpn-family-recombination-promoting-nuclease/putative-transposase
MNNNQLPHNINDLEYKYIFSNKSIFLRLLKRLDEIGIFKNLTEDQLERIDKSYVLPDFSQEESDLLYKVSLKEKEIIFYILFEHQSSVDHSMPLRLLFYITDIYRDYIKDFDRGEIKKKGFTLPAVVPIVFYDGEDRWTAARRLKEKILGFEEFGNCVIDFEYILIDLNQAESILQVKDILSLILKLNRIKRYEELERLILELGEYLLGAEEKEIEVLKVCLPAALRELDEIEVEAAKRAIDESVRGGEKVMPLFQNLRKIKEELIFEGLQQGLQQGFEQSRIETAERMILKGYKDEEIAEITGLSLERIKELRVKHRN
>CP034791.1|AZT89235.1|49973_50924_+|hypothetical-protein
MCLLVYDVMRIAKENHSSVCVRYSNSFYQRKSTCEKCLPKVHFGRKNNSNVRDYDCKNMIYYYCGRYSLKHAGEIFMLLEQINSRLPDNPRILSVGCGPCTDLFGFEAYYRKYKPKSMIEYHGFEKSMLWNEVHRFIIQHGKKHKLARVEVTYMDAINEFHKIEDIMRCEKPNIISFQYVLSDMAKYYDVAFVKRFAEKFVVKAFDILPKSTMIIFNDTNVTQQYALRNPEEVKGREILDYLARKFWTNYNIAVLKYYFPYNSDLSLCFGCAHSKCDIDMESVPEELKNYFEMWNQYRSAQLVFVKNADVSLAKRG
>CP034791.1|AZT91596.1|50928_52026_+|DUF1848-domain-containing-protein
MIISASRRTDIPAFYGDWFINRIKEGFAMYRNPMRLTQVFAVSLHPKDVDAIVFWTKNPKNFLDKLKYLEEYTYYFQFTITPYGKDIEPGIPSKDEVIETFIELSNMIGKKRVIWRYDPIIITDKMDLEYHKEKFEELCEKLSPYTQKCIISYVDFYSKAVDELNRINAKDLAAEELYNLFGAMGSIGKKYNLSVETCAEDLPVEQLGLKKAHCVDGELILQLKREKDPYWTASFKKDKNQRQVCGCVQSIDLGIFNTCKHFCTYCYANFSRNSILKNAEKYDVNSPLLCSRLDLEKDEIRIREKDGSIKLDREAILKAEANQKELMTQLDFYEYEKISLEDNSNNWLVEKILGYLKKTKQGTLL
>CP034791.1|AZT89236.1|54169_55456_+|IS110-family-transposase
MKYTQNEKILQVTERTLVVGVDIAKERHVGRAFDFRGVELGKRIEFENRKEGMEKFLDWANKIMKANGKESMIVGIEPTGHYWLCFEQYLRENGIKVVLVNPFHVKRSKELDDNTQTKSDIKDPKTIAMLVKDGRYTEPNIPEGIYAEMRVAMNIYERLQKQLNVLKNQIINWLDIYFPEFLGVFSDWEGKTAIATLREMPLPCDVVGKEVEGIIEYWRDKVDKRAISRRRAMDLTEAAKRSIGKKEGRKLARQEIKYLLEEYELLNKQVEEIEAEMAELLKEVPNGDKLLEIKGVGVKTAVGFISEVGDIKRYEDSKQIQKLAGLNIVENSSGKYKGQTCISKRGRGRLRSSLFKAMITIVAKNEEFKQLHRYYTTRENNPLKKKQSLIALCCKLIRVFYAILKKGVKYDGNKMLSDIKREALARTA
>CP034791.1|AZT89237.1|56041_57460_+|TIGR01897-family-CRISPR-associated-protein
MKIVYQVGRLDNPAIAIKKFYIKNFNGEIVEESGESELSSTVLRDFLRKRGCKAKTVVIYPVSIVLNSRLPEYIQPANLKEELAAIFKDPSDYLKNPDEFIDRIDLERCRDEKLIVHSLGEYMETFLDASYDDIVLEILFDMIERYLKGELEDLYLDISSGHNIYISAILEAARHFAVFSNLMNWLDESKVPKICITFSDPIIGSSAKSFEIHIQQQRFTAFFSSPIKRKEAAEYNFSFLRNIYPDPDNGAKGSEAAKLKQQVREKRKKLREKIEMFCLLFSAIKNNVPLYLYYQHYHSVDEIKEEIFKLIEHAKGQLCSDYQKSPNLNKRAYIDAILSLGFYIGIVNVLEKHNITMFCQDTGIDLDLLKRSFFEIYSTFRVPTNYVMLSNEISNTQKILEQMDDIGSWTGLYKIIDSGKPVGEPIDRNYFAHSGFERNITEIRTEGSTIFVKYAFNTNFNVINCWLKDRIE
>CP034791.1|AZT89238.1|58489_59719_-|IS256-like-element-ISCsa2-family-transposase
MEKNEIFETAKNMAIEQVLNMYCSKDDPTRPALKQLLENLLDCFMLSERTVYLAKNENDKGNGFYGRKLATPVGSLEISVPRTRSGNFRPSILPDRYKRVDSSYTDLLMSLVANGYSESSLVQTLKSMNLPYSEDEIEKIKNDLKNELQLFKQRELPESAFALIIDGYHCEIKDNSKVKQATCYVVLGIDLEGKKDIFGIYTFFGKENKADWMRVFDDLITRGLKKVLIVVSDDFPGIIDAVRLAYPLADHQLCFVHLQRNVRKHMAKDDASVFNKELDKLRTSSADFDEAISKFKLLCEQYSSKYPRFIKGICEKAEFYLAHMRYPEDLRKYIYTTNAVESVNSMIEKIRINSGGYFQSVEVLEINIYLQRENLRRGKWKNGVPILKKCSYNILQLYNIRYEMETQNS
>CP034791.1|AZT89239.1|59753_60479_-|hypothetical-protein
MENQLPHSIYDLEYKYIFSNKSLFLRLLKRLDFLQIFQNITEDSLERIDKSYVLPDFSEQESDLVYKVNLKDSELLFYILFEHQSTVDHSIPIRLLFYITDLYRDYVKQFDKSTLKRKTFLLPAVVPIVFYDGEDTWTVPTSFKEKILGFEEFGKYIIDFEYILIDLGKAEESLLKYKDVLSLILKLNRVRSYEELEKIFSSLWEYLEDAKENEVDIVKVCLPAALRELEGVKIKLCPLYN
>CP034791.1|AZT89240.1|62913_64299_+|ATP-binding-protein
MFVGRKYELETLNRLYNEDKFHFVVVYGRRRVGKTTLLTKFCKNKPSIFFVAEEYNDKINLESFSDKVLSYFNLSGLISQFESWEKAFIFLAQQAKDKRLVVVIDEFPYIVNSNKSIPSLLQNLIDHHLKKTKLFLIICGSSVSFIEKEVLSYKSPLYGRRTAQLIVEPFDFFESREFFPNYSFEDQVIAYGVLGGIPQYLSIFDSTKDIYENIKTKILDKSSYLYEEPKLLLRQEVREPALYNSIIEAIATGNSKLSEIAAKVGTDIDKCAKYISVLIDLKILEKVTPLKLEAKSRKSIYKIKDNFFRFWYRFVFTNKTLIEQGLIDEVIQNKIKPFMNEFIGEVYEQICMDYLKILNREKRLPFIFENIGKWWGNNPYKKREEEIDIVAFNQDNILFGECKWRNQKVDMSVLNNLIEKSMIFNYCKKFYVLFSKSGFTDEVISFAKQNPHVLLISEFEV
>CP034791.1|AZT91597.1|64762_65002_+|hypothetical-protein
MLYGDIDQENLKKLYETCRKITANYKIVVSILDYSSITKEKLRCLQDYSMDVEILKTIYKREFSVWANRQEIRGSLEEL

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Crispr_ID: CP034791_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034791_5

48673-49499

TypeIII

Consensus_repeat	Method
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	CRISPRCasFinder
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	CRT
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	PILER-CR

12 spacers

csx1,cas6,csm5gr7,csm4gr5,csm3gr7,cas10

The CRISPR arrays of CP034791_5

>merge|CP034791|5|48673-49499|CRISPRCasFinder,CRT,PILER-CR
GCATCAATCCCCAAAGGGAAGGCTACAAACATATGCTGCGACTTGGACAGCTGGTACAAATCTTGTGTTTCAATCCCCAAAGGGAAGGCTACAAACTGAAACTGCTTTTGTTTTTGAAGATGCAAAAGTTATGTTTCAATCCCCAAAGGGCAGGCTACAAACAATGATAGAAGAATACATTATGAAATTAAAAAATCCGTTTCAATCCCCAAAGGGCAGGCTACAAACCAAAATAGTAGGGATTTAATTCCGAGTAATTTTGTAGTTTCAATCCCCAAAGGGCAGGCTACAAACATTAGGTGGAACGGTAACAGTTCAATTAAGGAAAGACGTTTCAATCCCCAAAGGGCAGGCTACAAACCTTTGCTGGCAAGATATATACGCAAGAAAGAAGAATGTTTCAATCCCCAAAGGGCAGGCTACAAACTAGGATTCGAAGAGGGCTTGACTTTGGTTATGCAGTGTTTCAATCCCCAAAGGGCAGGCTACAAACCACTCTGGGCTGACCTACTGCTTGGTGAAAGGCCAGTTTCAATCCCCAAAGGGCAGGCTACAAACCAGCAAACTTGACATGTATAATGAGGCTACAAAAAATGCGTTTCAATCCCCAAAGGGCAGGCTACAAACAGTAAGGAGGGGATTTTATGACAGTATGGGAAATGGTGTTTCAATCCCCAAAGGGCAGGCTACAAACGAATGACATTGTCAGAAATTGCGAGATATGCATTGCAAGTTTCAATCCCCAAAGGGCAGGCTACAAACATATTAGCTTAAATACCAAAGACCAAGTGAGAGTAGTTTCAATCCCCAAAGGGCAGGCTACAAAC

>CP034791|5|5|48673-49499|CRISPRCasFinder
GCATCAATCCCCAAAGGGAAGGCTACAAAC	ATATGCTGCGACTTGGACAGCTGGTACAAATCTTGT
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	TGAAACTGCTTTTGTTTTTGAAGATGCAAAAGTTAT
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	AATGATAGAAGAATACATTATGAAATTAAAAAATCC
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	CAAAATAGTAGGGATTTAATTCCGAGTAATTTTGTA
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	ATTAGGTGGAACGGTAACAGTTCAATTAAGGAAAGAC
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	CTTTGCTGGCAAGATATATACGCAAGAAAGAAGAAT
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	TAGGATTCGAAGAGGGCTTGACTTTGGTTATGCAGT
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	CACTCTGGGCTGACCTACTGCTTGGTGAAAGGCCA
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	CAGCAAACTTGACATGTATAATGAGGCTACAAAAAATGC
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	AGTAAGGAGGGGATTTTATGACAGTATGGGAAATGGT
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	GAATGACATTGTCAGAAATTGCGAGATATGCATTGCAA
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	ATATTAGCTTAAATACCAAAGACCAAGTGAGAGTA
GTTTCAATCCCCAAAGGGCAGGCTACAAAC

>CP034791|5|5|48673-49499|CRT
GCATCAATCCCCAAAGGGAAGGCTACAAAC	ATATGCTGCGACTTGGACAGCTGGTACAAATCTTGT
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	TGAAACTGCTTTTGTTTTTGAAGATGCAAAAGTTAT
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	AATGATAGAAGAATACATTATGAAATTAAAAAATCC
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	CAAAATAGTAGGGATTTAATTCCGAGTAATTTTGTA
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	ATTAGGTGGAACGGTAACAGTTCAATTAAGGAAAGAC
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	CTTTGCTGGCAAGATATATACGCAAGAAAGAAGAAT
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	TAGGATTCGAAGAGGGCTTGACTTTGGTTATGCAGT
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	CACTCTGGGCTGACCTACTGCTTGGTGAAAGGCCA
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	CAGCAAACTTGACATGTATAATGAGGCTACAAAAAATGC
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	AGTAAGGAGGGGATTTTATGACAGTATGGGAAATGGT
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	GAATGACATTGTCAGAAATTGCGAGATATGCATTGCAA
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	ATATTAGCTTAAATACCAAAGACCAAGTGAGAGTA
GTTTCAATCCCCAAAGGGCAGGCTACAAAC

>CP034791|5|5|48739-49499|PILER-CR
GTTTCAATCCCCAAAGGGAAGGCTACAAAC	TGAAACTGCTTTTGTTTTTGAAGATGCAAAAGTTAT
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	AATGATAGAAGAATACATTATGAAATTAAAAAATCC
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	CAAAATAGTAGGGATTTAATTCCGAGTAATTTTGTA
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	ATTAGGTGGAACGGTAACAGTTCAATTAAGGAAAGAC
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	CTTTGCTGGCAAGATATATACGCAAGAAAGAAGAAT
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	TAGGATTCGAAGAGGGCTTGACTTTGGTTATGCAGT
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	CACTCTGGGCTGACCTACTGCTTGGTGAAAGGCCA
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	CAGCAAACTTGACATGTATAATGAGGCTACAAAAAATGC
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	AGTAAGGAGGGGATTTTATGACAGTATGGGAAATGGT
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	GAATGACATTGTCAGAAATTGCGAGATATGCATTGCAA
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	ATATTAGCTTAAATACCAAAGACCAAGTGAGAGTA
GTTTCAATCCCCAAAGGGCAGGCTACAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP034791.1\|AZT89230.1\|42784_43987_+\|hypothetical-protein	csm5gr7	mkCas0182_csm5gr7_CAS-III-A	unknown
CP034791.1\|AZT89241.1\|65033_65384_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89237.1\|56041_57460_+\|TIGR01897-family-CRISPR-associated-protein	csx1	cd09728_csx1_CAS-III	gnl\|CDD\|187859
CP034791.1\|AZT89233.1\|45693_46173_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|187863
CP034791.1\|AZT89242.1\|65498_67982_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
CP034791.1\|AZT89236.1\|54169_55456_+\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376564
CP034791.1\|AZT89240.1\|62913_64299_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|367293
CP034791.1\|AZT89229.1\|41852_42788_+\|hypothetical-protein	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	unknown
CP034791.1\|AZT91596.1\|50928_52026_+\|DUF1848-domain-containing-protein	unknown	unknown	gnl\|CDD\|378091
CP034791.1\|AZT89234.1\|47377_47632_-\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT91595.1\|47628_48588_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|368098
CP034791.1\|AZT91594.1\|41123_41825_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
CP034791.1\|AZT89239.1\|59753_60479_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368098
CP034791.1\|AZT89227.1\|37998_40446_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
CP034791.1\|AZT89235.1\|49973_50924_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89232.1\|44782_45694_+\|TIGR02221-family-CRISPR-associated-protein	csx1	cd09732_csx1_CAS-III	gnl\|CDD\|378186
CP034791.1\|AZT91597.1\|64762_65002_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89238.1\|58489_59719_-\|IS256-like-element-ISCsa2-family-transposase	unknown	unknown	gnl\|CDD\|307151
CP034791.1\|AZT89231.1\|43990_44728_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|187783
CP034791.1\|AZT89228.1\|40454_41075_+\|type-III-A-CRISPR-associated-protein-Csm2	unknown	unknown	gnl\|CDD\|367635

Protein	Function_ID	Function_description	E-value
CP034791.1\|AZT89237.1\|56041_57460_+\|TIGR01897-family-CRISPR-associated-protein	gnl\|CDD\|187859	cd09728, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as DxTHG family.	5.26568e-41
CP034791.1\|AZT89233.1\|45693_46173_+\|hypothetical-protein	gnl\|CDD\|187863	cd09732, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as TM1812 family.	0.00605887
CP034791.1\|AZT89242.1\|65498_67982_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	4.27783e-108
CP034791.1\|AZT89236.1\|54169_55456_+\|IS110-family-transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	2.93066e-28
CP034791.1\|AZT91596.1\|50928_52026_+\|DUF1848-domain-containing-protein	gnl\|CDD\|378091	pfam08902, DUF1848, Domain of unknown function (DUF1848). This family of proteins are functionally uncharacterized. The C-terminus contains a cluster of cysteines that are similar to the iron-sulfur cluster found at the N-terminus of pfam04055.	2.10467e-146
CP034791.1\|AZT91595.1\|47628_48588_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|368098	pfam04754, Transposase_31, Putative transposase, YhgA-like. This family of putative transposases includes the YhgA sequence from Escherichia coli and several prokaryotic homologs.	2.10988e-21
CP034791.1\|AZT91594.1\|41123_41825_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	2.99236e-79
CP034791.1\|AZT89239.1\|59753_60479_-\|hypothetical-protein	gnl\|CDD\|368098	pfam04754, Transposase_31, Putative transposase, YhgA-like. This family of putative transposases includes the YhgA sequence from Escherichia coli and several prokaryotic homologs.	8.55991e-21
CP034791.1\|AZT89227.1\|37998_40446_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	7.89848e-58
CP034791.1\|AZT89238.1\|58489_59719_-\|IS256-like-element-ISCsa2-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	5.33536e-63
CP034791.1\|AZT89232.1\|44782_45694_+\|TIGR02221-family-CRISPR-associated-protein	gnl\|CDD\|378186	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. The family describes Cas proteins of about 400 residues that include the motif [VIL]-D-x-[ST]-H-[GS]. The CRISPR and associated proteins are thought to be involved in the evolution of host resistance. The exact molecular function of this family is currently unknown.	3.86442e-55
CP034791.1\|AZT89240.1\|62913_64299_+\|ATP-binding-protein	gnl\|CDD\|367293	pfam03008, DUF234, Archaea bacterial proteins of unknown function.	2.04672e-31
CP034791.1\|AZT89231.1\|43990_44728_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	3.21402e-18
CP034791.1\|AZT89228.1\|40454_41075_+\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	0.000206843

>CP034791.1|AZT91595.1|47628_48588_-|Rpn-family-recombination-promoting-nuclease/putative-transposase
MNNNQLPHNINDLEYKYIFSNKSIFLRLLKRLDEIGIFKNLTEDQLERIDKSYVLPDFSQEESDLLYKVSLKEKEIIFYILFEHQSSVDHSMPLRLLFYITDIYRDYIKDFDRGEIKKKGFTLPAVVPIVFYDGEDRWTAARRLKEKILGFEEFGNCVIDFEYILIDLNQAESILQVKDILSLILKLNRIKRYEELERLILELGEYLLGAEEKEIEVLKVCLPAALRELDEIEVEAAKRAIDESVRGGEKVMPLFQNLRKIKEELIFEGLQQGLQQGFEQSRIETAERMILKGYKDEEIAEITGLSLERIKELRVKHRN
>CP034791.1|AZT89234.1|47377_47632_-|hypothetical-protein
MIEILKNILLPQAFLMLLVAFIVLASSRIEISTFELLFERQFILFHFDQKSHLSTSGSKILKVDLYAVSKRFGMVFAKLLAVAG
>CP034791.1|AZT89233.1|45693_46173_+|hypothetical-protein
MVEKIKQKTQKFENADNLIVGEEVIKWCKEYSLIAEGYVALEETMITYLCRVLGVDENDSDVRKLVSAAATKKSKQKNEQIETKNIYEAETKENEKIHEMAKSIPIEIAGFIERIKAKRNSVMHFGFTKDRIGSGKIIKEFEELVEEALKLLSQTKNQV
>CP034791.1|AZT89232.1|44782_45694_+|TIGR02221-family-CRISPR-associated-protein
MGKKFLSFLGANNYTPSTYTLNILDKNDSKYAKYTQVVLLEKICNQWDEDAKGFIFVTQEAKRVNWDGGDENNQSLKREIEKLKEAGTIKFEVEAVEIPNGFSEQDIWKIFEIVVNHIEEEDEIVFDITHGYRYLPMLIVVMLSYLKTVKNINILGIYYGLFEVKDSNKPILNFTPFIDLLDLSFGVSAFLHFGDGSYLENTLLCKKDVCVKNEKQKLIQSGLDIEIAEKKIEKMFASNEWFKGINDLISFAKSLRNFTDSIFTLRGRCTQNRDESIFAAHKDLREKIEKVQNLDADISSLSN
>CP034791.1|AZT89231.1|43990_44728_+|CRISPR-associated-endoribonuclease-Cas6
MRYKIRFYTENDMNISIHYNIELAKAVRNLLNPKYREFVDKGGFSLGKTIYKPYTFSRLFPQEYRVINSKLEIKKGYVDLIVSSIDENFWFSFLEGLLKEKKITLYGNTMCLDSFAIKKFKRKNKMIVKTLSPIMCRINLSEQTKNEFELFLKGNVVNKACVFKKRIFSLDDINLKFFENTVKETVVILNGTPNKAYSGLILLDGDEDIVEVAYFTGIGPKNALGFGCVEDIKLKNERVIYKLSL
>CP034791.1|AZT89230.1|42784_43987_+|hypothetical-protein
MKEKYSVKTYELRLRALTDFCVSANQDAVVESSDYIIHDKYAYIIDSKAVFNMLKDGIISERDLEDVKEFLKNNPEYLEKYFKTRRLELARNYENMLSISRFWRYLDIKENEVTENYAVPASTIKGILNTGFLSFFLEDIEYVYARGQKARLNLKSLKVNNAQARIDNTQSLFKTFESKEDFQKGLKVFYAAQSSWEEKGYLDEIREAEDIFDSIEKSLFRTVECLDAVFKEGSFIVKKVKRLSRANNRSALPQYFELAQKGSLFAGKVQVSVPHDGEPLSSLSFLYEDSNYIEDLNVMDICIEGLKIYSKKLVKAEEKFFAQKIGSLNSQSQNFYNDLWSECERGNIVIKIGKSGIHAKSFMSFDSNNLEKNDFFPYTINIDDENKLPIGWVKLEIEEE
>CP034791.1|AZT89229.1|41852_42788_+|hypothetical-protein
MIYRADFLISSSSSKLISPVIFGAIADKVFELTEEKQAKELVFDMAQNVLISDALPSEEEEDDFIRYFYVPRIIPPYEDDQNSLSLRERRELARKNKKLAKSVSLVEIDNSGILKEADPSKVKDPVDFYRIGIQVNRKSAASEVGIFFYHQEFRFSKKQCYSIYIQCKKPSLVNKIEECFKVIELTGFGPDVSIGKGKISFLRHNQRILCRDEVTEQFFDSEPDVEKEYVNIASTILFDKAVSACQFKSYQTFRYDSKGYGVFKPPYFCAERSSVVVPKGKDLSFLIEYKGRFIYTCIFPLRLIQIGGEKI
>CP034791.1|AZT91594.1|41123_41825_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MLLKQIIVLKTIMKIKTGLRIGGSREELKIGDIDNPVIRDPLTNEPYIPGSSLKGKMRSSLEITLKGTKDPCNCGNCPICVLFGAAKNKPQSGEKEVTRLIVRDSFMTEKSKKLLLDFVGDYVEIKKENVINRVTGVAKDPRTLDRIPAGTEFECEFVLRIYQKDQEKVEEYIKYIETALTLIELTYLGGSGTRGYGKVEFGENGNKIIEKKVYEIVKSEDGFVKVEEKSEDS
>CP034791.1|AZT89228.1|40454_41075_+|type-III-A-CRISPR-associated-protein-Csm2
MPRPNNLPHRGNNRNAQNRTATSQNQRSSTLIIDEDKQRELEQNKHDLFELIKDDNGFCDEHGIRYEVAEKIEKFAEYLNAAYVQNDSDVGVTSSSIRNIYDNYISIKRKFQTVQLEQREIEDAETRKENAFMKIKPELIFVKSKVNYTVERKLKEERNEAKKQIKELSYNALKEFINISTTKITTSYNQFEAFIKIFETLVGFMK
>CP034791.1|AZT89227.1|37998_40446_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MCLGKETYRNLIAVTALLHDIGKFIRRSGLGSLSHQEESKKFLEKYMEKFRNKNLFTNQELELIKRLIENHHNIEKINKSSACSDAENNLLKILIYSDWDSASERRQEKETSGSQEYVPIHSILSFINEAFDIDEALRQGEEDKIFEHISYVRAFSPQDAFVYERPELNPAHPVVEDNRKRFEIFESEFKTLIEESKNQYEFVLRLNYILKKHTTYITSSGKEKIRDISLYHHSATTAMFAINRLIDFEHGEQIEQRKQYGAVYGRLFKIQDYIFSGINSKIEKPLKRIITRSQLVSILNMLIPYDIVKTLDLYPFNIIFYGGGAFLILIPLSYISKAQERIKEIKKTVDEIFESKIYFEAVYERISVYENGYVLGNELKSLGEKLSEKKFARSFDTIAPFIHEKYFEKAYFKCENCKINSSKTILSGENFVCKCCQVEEKWMNEDITKLKFLFDRLYVENIQDPELLSAGADSNSALVLTFTKSEAENRKCIDTFLQGRKFIYTADFCQRCPEYDDCAEPYKHILSEEDERLTMKLASLDCLEKMSDSDNIIATAKMDIDDLGFILYSIYPIKVLQNESYPFSITRLSYASWLLNLFFTEGVKKVINEKFKDDVMILYSGGDDLLLTGVWYKVIEAIDEIEKEFSQFVTGKVIDRKNVTVTASIYFHRAHENFDSVLIKLNEGLEEAKKIKNRVFLFDNVISYPELRRSLDISKKIVDYVNEKVLGKLIIRKLLRILEWRKLRNCYQEIKATSHYVYLKTRLIENNKNLSEDKKKEVIEFLDSFMSLHTDNSNVSMAIVAINIALRKLIKESEE
>CP034791.1|AZT89235.1|49973_50924_+|hypothetical-protein
MCLLVYDVMRIAKENHSSVCVRYSNSFYQRKSTCEKCLPKVHFGRKNNSNVRDYDCKNMIYYYCGRYSLKHAGEIFMLLEQINSRLPDNPRILSVGCGPCTDLFGFEAYYRKYKPKSMIEYHGFEKSMLWNEVHRFIIQHGKKHKLARVEVTYMDAINEFHKIEDIMRCEKPNIISFQYVLSDMAKYYDVAFVKRFAEKFVVKAFDILPKSTMIIFNDTNVTQQYALRNPEEVKGREILDYLARKFWTNYNIAVLKYYFPYNSDLSLCFGCAHSKCDIDMESVPEELKNYFEMWNQYRSAQLVFVKNADVSLAKRG
>CP034791.1|AZT91596.1|50928_52026_+|DUF1848-domain-containing-protein
MIISASRRTDIPAFYGDWFINRIKEGFAMYRNPMRLTQVFAVSLHPKDVDAIVFWTKNPKNFLDKLKYLEEYTYYFQFTITPYGKDIEPGIPSKDEVIETFIELSNMIGKKRVIWRYDPIIITDKMDLEYHKEKFEELCEKLSPYTQKCIISYVDFYSKAVDELNRINAKDLAAEELYNLFGAMGSIGKKYNLSVETCAEDLPVEQLGLKKAHCVDGELILQLKREKDPYWTASFKKDKNQRQVCGCVQSIDLGIFNTCKHFCTYCYANFSRNSILKNAEKYDVNSPLLCSRLDLEKDEIRIREKDGSIKLDREAILKAEANQKELMTQLDFYEYEKISLEDNSNNWLVEKILGYLKKTKQGTLL
>CP034791.1|AZT89236.1|54169_55456_+|IS110-family-transposase
MKYTQNEKILQVTERTLVVGVDIAKERHVGRAFDFRGVELGKRIEFENRKEGMEKFLDWANKIMKANGKESMIVGIEPTGHYWLCFEQYLRENGIKVVLVNPFHVKRSKELDDNTQTKSDIKDPKTIAMLVKDGRYTEPNIPEGIYAEMRVAMNIYERLQKQLNVLKNQIINWLDIYFPEFLGVFSDWEGKTAIATLREMPLPCDVVGKEVEGIIEYWRDKVDKRAISRRRAMDLTEAAKRSIGKKEGRKLARQEIKYLLEEYELLNKQVEEIEAEMAELLKEVPNGDKLLEIKGVGVKTAVGFISEVGDIKRYEDSKQIQKLAGLNIVENSSGKYKGQTCISKRGRGRLRSSLFKAMITIVAKNEEFKQLHRYYTTRENNPLKKKQSLIALCCKLIRVFYAILKKGVKYDGNKMLSDIKREALARTA
>CP034791.1|AZT89237.1|56041_57460_+|TIGR01897-family-CRISPR-associated-protein
MKIVYQVGRLDNPAIAIKKFYIKNFNGEIVEESGESELSSTVLRDFLRKRGCKAKTVVIYPVSIVLNSRLPEYIQPANLKEELAAIFKDPSDYLKNPDEFIDRIDLERCRDEKLIVHSLGEYMETFLDASYDDIVLEILFDMIERYLKGELEDLYLDISSGHNIYISAILEAARHFAVFSNLMNWLDESKVPKICITFSDPIIGSSAKSFEIHIQQQRFTAFFSSPIKRKEAAEYNFSFLRNIYPDPDNGAKGSEAAKLKQQVREKRKKLREKIEMFCLLFSAIKNNVPLYLYYQHYHSVDEIKEEIFKLIEHAKGQLCSDYQKSPNLNKRAYIDAILSLGFYIGIVNVLEKHNITMFCQDTGIDLDLLKRSFFEIYSTFRVPTNYVMLSNEISNTQKILEQMDDIGSWTGLYKIIDSGKPVGEPIDRNYFAHSGFERNITEIRTEGSTIFVKYAFNTNFNVINCWLKDRIE
>CP034791.1|AZT89238.1|58489_59719_-|IS256-like-element-ISCsa2-family-transposase
MEKNEIFETAKNMAIEQVLNMYCSKDDPTRPALKQLLENLLDCFMLSERTVYLAKNENDKGNGFYGRKLATPVGSLEISVPRTRSGNFRPSILPDRYKRVDSSYTDLLMSLVANGYSESSLVQTLKSMNLPYSEDEIEKIKNDLKNELQLFKQRELPESAFALIIDGYHCEIKDNSKVKQATCYVVLGIDLEGKKDIFGIYTFFGKENKADWMRVFDDLITRGLKKVLIVVSDDFPGIIDAVRLAYPLADHQLCFVHLQRNVRKHMAKDDASVFNKELDKLRTSSADFDEAISKFKLLCEQYSSKYPRFIKGICEKAEFYLAHMRYPEDLRKYIYTTNAVESVNSMIEKIRINSGGYFQSVEVLEINIYLQRENLRRGKWKNGVPILKKCSYNILQLYNIRYEMETQNS
>CP034791.1|AZT89239.1|59753_60479_-|hypothetical-protein
MENQLPHSIYDLEYKYIFSNKSLFLRLLKRLDFLQIFQNITEDSLERIDKSYVLPDFSEQESDLVYKVNLKDSELLFYILFEHQSTVDHSIPIRLLFYITDLYRDYVKQFDKSTLKRKTFLLPAVVPIVFYDGEDTWTVPTSFKEKILGFEEFGKYIIDFEYILIDLGKAEESLLKYKDVLSLILKLNRVRSYEELEKIFSSLWEYLEDAKENEVDIVKVCLPAALRELEGVKIKLCPLYN
>CP034791.1|AZT89240.1|62913_64299_+|ATP-binding-protein
MFVGRKYELETLNRLYNEDKFHFVVVYGRRRVGKTTLLTKFCKNKPSIFFVAEEYNDKINLESFSDKVLSYFNLSGLISQFESWEKAFIFLAQQAKDKRLVVVIDEFPYIVNSNKSIPSLLQNLIDHHLKKTKLFLIICGSSVSFIEKEVLSYKSPLYGRRTAQLIVEPFDFFESREFFPNYSFEDQVIAYGVLGGIPQYLSIFDSTKDIYENIKTKILDKSSYLYEEPKLLLRQEVREPALYNSIIEAIATGNSKLSEIAAKVGTDIDKCAKYISVLIDLKILEKVTPLKLEAKSRKSIYKIKDNFFRFWYRFVFTNKTLIEQGLIDEVIQNKIKPFMNEFIGEVYEQICMDYLKILNREKRLPFIFENIGKWWGNNPYKKREEEIDIVAFNQDNILFGECKWRNQKVDMSVLNNLIEKSMIFNYCKKFYVLFSKSGFTDEVISFAKQNPHVLLISEFEV
>CP034791.1|AZT91597.1|64762_65002_+|hypothetical-protein
MLYGDIDQENLKKLYETCRKITANYKIVVSILDYSSITKEKLRCLQDYSMDVEILKTIYKREFSVWANRQEIRGSLEEL
>CP034791.1|AZT89241.1|65033_65384_+|hypothetical-protein
MIWDPHLENYLSQASEVEKVEITEQIEGIFLQAKEENLPFINYPFRLIGRDKATGEILFSVNFEKSFMGFAFIGAHVKNAHINFGTANGISDYNDFKKKALDCARIIIKDNLFELK
>CP034791.1|AZT89242.1|65498_67982_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MIFYNAHQREEDKYFDYTLFLGAILHDIGKFYMRTEESEAKKNISKEYEVFYREEGKRAPRHQEWSAFFVEHFLPESLKTVTSLVLYHHRPSSYQQLLISVADKISAKVDRKDLSDEEAADDKSKYLISVLSQISLDEKKGNTKTPYYKLLKKRYEVEPPSSSFNTNAKEDYQSLWAEFSKKINTLKNGFGSSFDLEDFATAIYNLLRIYTYNIPSAFYYSQPDISLWAHSKSTAAIAFCLDRQLKKEFSQENERVRVLEAINTKLLPGNESAIKKGDYPYFCLVKGDVSGIQEFVFDTKMDGALKALKAKSFYISFLLDTIARYILKEEKMPICNLIYNGGGHFYLLMPGYFMRKLSQYQQKIDKILFSAHRGALSVLLEAAEVDLYDFAHNFGDCFDRVSRNIQKKKACKFKNVLEETKMEFFEPWEDYEQKCPHCGRKIEPKEDNPDFCSFCESFVQLGDELMKSLFIIDSWGKEKEFSEFSDIHNVLKAFGRYVQFSNHYESVANTLILDRSRIEDLQRKQMKIEKGQKGPKSEFESEFYEDLDISTHVPFKNEDENVLMLIDDIAESAKGIKTWGIVRGDVDNLGSIFRSGLGEDNSISRVMTLSEEFSLFFGYYFNKLIKKQNGNIIVIYAGGDDFCILGQWDVLPQTAHKIYTEFRSFSCWNSDVTLSMGFEIAPDKKYPIYRVAMVCGDHLEQAKEYERKDGKKKDCFAFGANFVGWEEFEDLKKLKESIADLVGNKNVSKALINGIYAVCSLKKMADDQRELFKAWRFVYFMARLKERYSKCSTELESVLNKIIDEKTNTLYKHSYLAARWAELELRR

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Crispr_ID: CP034791_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034791_6

62221-62380

TypeIII

Consensus_repeat	Method
TTTCAATCCCCAAAGGGGAGGCTACAAACA	CRISPRCasFinder

2 spacers

csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6

The CRISPR arrays of CP034791_6

>merge|CP034791|6|62221-62380|CRISPRCasFinder
TCGCAATTCCCAGAGGGAAGGCTACAAACGATGGGCTGGTTTAGTAAAGAGGGTAGCTGCCATAGTTTCAATCCCCAAAGGGGAGGCTACAAACAAAGCTGTTGCAGAACCTACTGCCACATATAACGTATTTCAATCCCCAAAGGGGAGGCTACAAACA

>CP034791|6|6|62221-62380|CRISPRCasFinder
TCGCAATTCCCAGAGGGAAGGCTACAAACG	ATGGGCTGGTTTAGTAAAGAGGGTAGCTGCCATAG
TTTCAATCCCCAAAGGGGAGGCTACAAACA	AAGCTGTTGCAGAACCTACTGCCACATATAACGTA
TTTCAATCCCCAAAGGGGAGGCTACAAACA

Protein	Signature genes	Signature genes Name	Protein_function
CP034791.1\|AZT89248.1\|72410_72644_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273806
CP034791.1\|AZT89241.1\|65033_65384_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89247.1\|71470_72094_+\|hypothetical-protein	cas6	mkCas0062_cas6_CAS-I:CAS-III	unknown
CP034791.1\|AZT89237.1\|56041_57460_+\|TIGR01897-family-CRISPR-associated-protein	csx1	cd09728_csx1_CAS-III	gnl\|CDD\|187859
CP034791.1\|AZT89233.1\|45693_46173_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|187863
CP034791.1\|AZT89242.1\|65498_67982_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
CP034791.1\|AZT89236.1\|54169_55456_+\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376564
CP034791.1\|AZT89245.1\|69307_70318_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	cd09663_csm4gr5_CAS-III-A	gnl\|CDD\|273866
CP034791.1\|AZT89240.1\|62913_64299_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|367293
CP034791.1\|AZT89244.1\|68451_69264_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
CP034791.1\|AZT91596.1\|50928_52026_+\|DUF1848-domain-containing-protein	unknown	unknown	gnl\|CDD\|378091
CP034791.1\|AZT89234.1\|47377_47632_-\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT91595.1\|47628_48588_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|368098
CP034791.1\|AZT91597.1\|64762_65002_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89239.1\|59753_60479_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368098
CP034791.1\|AZT89235.1\|49973_50924_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89232.1\|44782_45694_+\|TIGR02221-family-CRISPR-associated-protein	csx1	cd09732_csx1_CAS-III	gnl\|CDD\|378186
CP034791.1\|AZT89238.1\|58489_59719_-\|IS256-like-element-ISCsa2-family-transposase	unknown	unknown	gnl\|CDD\|307151
CP034791.1\|AZT89243.1\|68013_68424_+\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	gnl\|CDD\|367635
CP034791.1\|AZT89246.1\|70307_71474_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl\|CDD\|273863

Protein	Function_ID	Function_description	E-value
CP034791.1\|AZT89248.1\|72410_72644_-\|hypothetical-protein	gnl\|CDD\|273806	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase). Several lines of evidence suggest that members of this family (loaded as a fragment mode model to find part-length matches) are associated with transposition, inversion, or recombination. Members are found in small numbers of genomes, but in large copy numbers in many of those species, including over 30 full length and fragmentary members in Treponema denticola. The strongest similarities are usually within rather than between species. PSI-BLAST shows similarity to proteins designated as possible transposases, DNA invertases (resolvases), and recombinases. In the oral pathogenic spirochete Treponema denticola, full-length members are often found near transporters or other membrane proteins. This family includes members of the putative transposase family pfam04754.	8.21577e-07
CP034791.1\|AZT89246.1\|70307_71474_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|273863	TIGR01899, cas_TM1807_csm5, CRISPR type III-A/MTUBE-associated RAMP protein Csm5. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. Members of this cas gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm5, for CRISPR/cas Subtype Mtube, protein 5.	1.60456e-20
CP034791.1\|AZT89237.1\|56041_57460_+\|TIGR01897-family-CRISPR-associated-protein	gnl\|CDD\|187859	cd09728, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as DxTHG family.	5.26568e-41
CP034791.1\|AZT89233.1\|45693_46173_+\|hypothetical-protein	gnl\|CDD\|187863	cd09732, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as TM1812 family.	0.00605887
CP034791.1\|AZT89242.1\|65498_67982_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	4.27783e-108
CP034791.1\|AZT89243.1\|68013_68424_+\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	1.13425e-33
CP034791.1\|AZT89236.1\|54169_55456_+\|IS110-family-transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	2.93066e-28
CP034791.1\|AZT89244.1\|68451_69264_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	4.79574e-77
CP034791.1\|AZT91596.1\|50928_52026_+\|DUF1848-domain-containing-protein	gnl\|CDD\|378091	pfam08902, DUF1848, Domain of unknown function (DUF1848). This family of proteins are functionally uncharacterized. The C-terminus contains a cluster of cysteines that are similar to the iron-sulfur cluster found at the N-terminus of pfam04055.	2.10467e-146
CP034791.1\|AZT89245.1\|69307_70318_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl\|CDD\|273866	TIGR01903, Hypothetical_protein., CRISPR type III-A/MTUBE-associated RAMP protein Csm4. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. Members of this cas gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm4, for CRISPR/cas Subtype Mtube, protein 4.	5.00699e-54
CP034791.1\|AZT91595.1\|47628_48588_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|368098	pfam04754, Transposase_31, Putative transposase, YhgA-like. This family of putative transposases includes the YhgA sequence from Escherichia coli and several prokaryotic homologs.	2.10988e-21
CP034791.1\|AZT89239.1\|59753_60479_-\|hypothetical-protein	gnl\|CDD\|368098	pfam04754, Transposase_31, Putative transposase, YhgA-like. This family of putative transposases includes the YhgA sequence from Escherichia coli and several prokaryotic homologs.	8.55991e-21
CP034791.1\|AZT89238.1\|58489_59719_-\|IS256-like-element-ISCsa2-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	5.33536e-63
CP034791.1\|AZT89232.1\|44782_45694_+\|TIGR02221-family-CRISPR-associated-protein	gnl\|CDD\|378186	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. The family describes Cas proteins of about 400 residues that include the motif [VIL]-D-x-[ST]-H-[GS]. The CRISPR and associated proteins are thought to be involved in the evolution of host resistance. The exact molecular function of this family is currently unknown.	3.86442e-55
CP034791.1\|AZT89240.1\|62913_64299_+\|ATP-binding-protein	gnl\|CDD\|367293	pfam03008, DUF234, Archaea bacterial proteins of unknown function.	2.04672e-31

>CP034791.1|AZT89239.1|59753_60479_-|hypothetical-protein
MENQLPHSIYDLEYKYIFSNKSLFLRLLKRLDFLQIFQNITEDSLERIDKSYVLPDFSEQESDLVYKVNLKDSELLFYILFEHQSTVDHSIPIRLLFYITDLYRDYVKQFDKSTLKRKTFLLPAVVPIVFYDGEDTWTVPTSFKEKILGFEEFGKYIIDFEYILIDLGKAEESLLKYKDVLSLILKLNRVRSYEELEKIFSSLWEYLEDAKENEVDIVKVCLPAALRELEGVKIKLCPLYN
>CP034791.1|AZT89238.1|58489_59719_-|IS256-like-element-ISCsa2-family-transposase
MEKNEIFETAKNMAIEQVLNMYCSKDDPTRPALKQLLENLLDCFMLSERTVYLAKNENDKGNGFYGRKLATPVGSLEISVPRTRSGNFRPSILPDRYKRVDSSYTDLLMSLVANGYSESSLVQTLKSMNLPYSEDEIEKIKNDLKNELQLFKQRELPESAFALIIDGYHCEIKDNSKVKQATCYVVLGIDLEGKKDIFGIYTFFGKENKADWMRVFDDLITRGLKKVLIVVSDDFPGIIDAVRLAYPLADHQLCFVHLQRNVRKHMAKDDASVFNKELDKLRTSSADFDEAISKFKLLCEQYSSKYPRFIKGICEKAEFYLAHMRYPEDLRKYIYTTNAVESVNSMIEKIRINSGGYFQSVEVLEINIYLQRENLRRGKWKNGVPILKKCSYNILQLYNIRYEMETQNS
>CP034791.1|AZT89237.1|56041_57460_+|TIGR01897-family-CRISPR-associated-protein
MKIVYQVGRLDNPAIAIKKFYIKNFNGEIVEESGESELSSTVLRDFLRKRGCKAKTVVIYPVSIVLNSRLPEYIQPANLKEELAAIFKDPSDYLKNPDEFIDRIDLERCRDEKLIVHSLGEYMETFLDASYDDIVLEILFDMIERYLKGELEDLYLDISSGHNIYISAILEAARHFAVFSNLMNWLDESKVPKICITFSDPIIGSSAKSFEIHIQQQRFTAFFSSPIKRKEAAEYNFSFLRNIYPDPDNGAKGSEAAKLKQQVREKRKKLREKIEMFCLLFSAIKNNVPLYLYYQHYHSVDEIKEEIFKLIEHAKGQLCSDYQKSPNLNKRAYIDAILSLGFYIGIVNVLEKHNITMFCQDTGIDLDLLKRSFFEIYSTFRVPTNYVMLSNEISNTQKILEQMDDIGSWTGLYKIIDSGKPVGEPIDRNYFAHSGFERNITEIRTEGSTIFVKYAFNTNFNVINCWLKDRIE
>CP034791.1|AZT89236.1|54169_55456_+|IS110-family-transposase
MKYTQNEKILQVTERTLVVGVDIAKERHVGRAFDFRGVELGKRIEFENRKEGMEKFLDWANKIMKANGKESMIVGIEPTGHYWLCFEQYLRENGIKVVLVNPFHVKRSKELDDNTQTKSDIKDPKTIAMLVKDGRYTEPNIPEGIYAEMRVAMNIYERLQKQLNVLKNQIINWLDIYFPEFLGVFSDWEGKTAIATLREMPLPCDVVGKEVEGIIEYWRDKVDKRAISRRRAMDLTEAAKRSIGKKEGRKLARQEIKYLLEEYELLNKQVEEIEAEMAELLKEVPNGDKLLEIKGVGVKTAVGFISEVGDIKRYEDSKQIQKLAGLNIVENSSGKYKGQTCISKRGRGRLRSSLFKAMITIVAKNEEFKQLHRYYTTRENNPLKKKQSLIALCCKLIRVFYAILKKGVKYDGNKMLSDIKREALARTA
>CP034791.1|AZT91596.1|50928_52026_+|DUF1848-domain-containing-protein
MIISASRRTDIPAFYGDWFINRIKEGFAMYRNPMRLTQVFAVSLHPKDVDAIVFWTKNPKNFLDKLKYLEEYTYYFQFTITPYGKDIEPGIPSKDEVIETFIELSNMIGKKRVIWRYDPIIITDKMDLEYHKEKFEELCEKLSPYTQKCIISYVDFYSKAVDELNRINAKDLAAEELYNLFGAMGSIGKKYNLSVETCAEDLPVEQLGLKKAHCVDGELILQLKREKDPYWTASFKKDKNQRQVCGCVQSIDLGIFNTCKHFCTYCYANFSRNSILKNAEKYDVNSPLLCSRLDLEKDEIRIREKDGSIKLDREAILKAEANQKELMTQLDFYEYEKISLEDNSNNWLVEKILGYLKKTKQGTLL
>CP034791.1|AZT89235.1|49973_50924_+|hypothetical-protein
MCLLVYDVMRIAKENHSSVCVRYSNSFYQRKSTCEKCLPKVHFGRKNNSNVRDYDCKNMIYYYCGRYSLKHAGEIFMLLEQINSRLPDNPRILSVGCGPCTDLFGFEAYYRKYKPKSMIEYHGFEKSMLWNEVHRFIIQHGKKHKLARVEVTYMDAINEFHKIEDIMRCEKPNIISFQYVLSDMAKYYDVAFVKRFAEKFVVKAFDILPKSTMIIFNDTNVTQQYALRNPEEVKGREILDYLARKFWTNYNIAVLKYYFPYNSDLSLCFGCAHSKCDIDMESVPEELKNYFEMWNQYRSAQLVFVKNADVSLAKRG
>CP034791.1|AZT91595.1|47628_48588_-|Rpn-family-recombination-promoting-nuclease/putative-transposase
MNNNQLPHNINDLEYKYIFSNKSIFLRLLKRLDEIGIFKNLTEDQLERIDKSYVLPDFSQEESDLLYKVSLKEKEIIFYILFEHQSSVDHSMPLRLLFYITDIYRDYIKDFDRGEIKKKGFTLPAVVPIVFYDGEDRWTAARRLKEKILGFEEFGNCVIDFEYILIDLNQAESILQVKDILSLILKLNRIKRYEELERLILELGEYLLGAEEKEIEVLKVCLPAALRELDEIEVEAAKRAIDESVRGGEKVMPLFQNLRKIKEELIFEGLQQGLQQGFEQSRIETAERMILKGYKDEEIAEITGLSLERIKELRVKHRN
>CP034791.1|AZT89234.1|47377_47632_-|hypothetical-protein
MIEILKNILLPQAFLMLLVAFIVLASSRIEISTFELLFERQFILFHFDQKSHLSTSGSKILKVDLYAVSKRFGMVFAKLLAVAG
>CP034791.1|AZT89233.1|45693_46173_+|hypothetical-protein
MVEKIKQKTQKFENADNLIVGEEVIKWCKEYSLIAEGYVALEETMITYLCRVLGVDENDSDVRKLVSAAATKKSKQKNEQIETKNIYEAETKENEKIHEMAKSIPIEIAGFIERIKAKRNSVMHFGFTKDRIGSGKIIKEFEELVEEALKLLSQTKNQV
>CP034791.1|AZT89232.1|44782_45694_+|TIGR02221-family-CRISPR-associated-protein
MGKKFLSFLGANNYTPSTYTLNILDKNDSKYAKYTQVVLLEKICNQWDEDAKGFIFVTQEAKRVNWDGGDENNQSLKREIEKLKEAGTIKFEVEAVEIPNGFSEQDIWKIFEIVVNHIEEEDEIVFDITHGYRYLPMLIVVMLSYLKTVKNINILGIYYGLFEVKDSNKPILNFTPFIDLLDLSFGVSAFLHFGDGSYLENTLLCKKDVCVKNEKQKLIQSGLDIEIAEKKIEKMFASNEWFKGINDLISFAKSLRNFTDSIFTLRGRCTQNRDESIFAAHKDLREKIEKVQNLDADISSLSN
>CP034791.1|AZT89240.1|62913_64299_+|ATP-binding-protein
MFVGRKYELETLNRLYNEDKFHFVVVYGRRRVGKTTLLTKFCKNKPSIFFVAEEYNDKINLESFSDKVLSYFNLSGLISQFESWEKAFIFLAQQAKDKRLVVVIDEFPYIVNSNKSIPSLLQNLIDHHLKKTKLFLIICGSSVSFIEKEVLSYKSPLYGRRTAQLIVEPFDFFESREFFPNYSFEDQVIAYGVLGGIPQYLSIFDSTKDIYENIKTKILDKSSYLYEEPKLLLRQEVREPALYNSIIEAIATGNSKLSEIAAKVGTDIDKCAKYISVLIDLKILEKVTPLKLEAKSRKSIYKIKDNFFRFWYRFVFTNKTLIEQGLIDEVIQNKIKPFMNEFIGEVYEQICMDYLKILNREKRLPFIFENIGKWWGNNPYKKREEEIDIVAFNQDNILFGECKWRNQKVDMSVLNNLIEKSMIFNYCKKFYVLFSKSGFTDEVISFAKQNPHVLLISEFEV
>CP034791.1|AZT91597.1|64762_65002_+|hypothetical-protein
MLYGDIDQENLKKLYETCRKITANYKIVVSILDYSSITKEKLRCLQDYSMDVEILKTIYKREFSVWANRQEIRGSLEEL
>CP034791.1|AZT89241.1|65033_65384_+|hypothetical-protein
MIWDPHLENYLSQASEVEKVEITEQIEGIFLQAKEENLPFINYPFRLIGRDKATGEILFSVNFEKSFMGFAFIGAHVKNAHINFGTANGISDYNDFKKKALDCARIIIKDNLFELK
>CP034791.1|AZT89242.1|65498_67982_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MIFYNAHQREEDKYFDYTLFLGAILHDIGKFYMRTEESEAKKNISKEYEVFYREEGKRAPRHQEWSAFFVEHFLPESLKTVTSLVLYHHRPSSYQQLLISVADKISAKVDRKDLSDEEAADDKSKYLISVLSQISLDEKKGNTKTPYYKLLKKRYEVEPPSSSFNTNAKEDYQSLWAEFSKKINTLKNGFGSSFDLEDFATAIYNLLRIYTYNIPSAFYYSQPDISLWAHSKSTAAIAFCLDRQLKKEFSQENERVRVLEAINTKLLPGNESAIKKGDYPYFCLVKGDVSGIQEFVFDTKMDGALKALKAKSFYISFLLDTIARYILKEEKMPICNLIYNGGGHFYLLMPGYFMRKLSQYQQKIDKILFSAHRGALSVLLEAAEVDLYDFAHNFGDCFDRVSRNIQKKKACKFKNVLEETKMEFFEPWEDYEQKCPHCGRKIEPKEDNPDFCSFCESFVQLGDELMKSLFIIDSWGKEKEFSEFSDIHNVLKAFGRYVQFSNHYESVANTLILDRSRIEDLQRKQMKIEKGQKGPKSEFESEFYEDLDISTHVPFKNEDENVLMLIDDIAESAKGIKTWGIVRGDVDNLGSIFRSGLGEDNSISRVMTLSEEFSLFFGYYFNKLIKKQNGNIIVIYAGGDDFCILGQWDVLPQTAHKIYTEFRSFSCWNSDVTLSMGFEIAPDKKYPIYRVAMVCGDHLEQAKEYERKDGKKKDCFAFGANFVGWEEFEDLKKLKESIADLVGNKNVSKALINGIYAVCSLKKMADDQRELFKAWRFVYFMARLKERYSKCSTELESVLNKIIDEKTNTLYKHSYLAARWAELELRR
>CP034791.1|AZT89243.1|68013_68424_+|type-III-A-CRISPR-associated-protein-Csm2
MPAQGGNNALALKDDILSKIETAIDPEKDKDGKAFSDVAEKTGQLLKESGVTITQIRKLFTEVKRLSPEDDNYKYKLKLLKAKLAYTAGRFKKMKHFQEIIDKALPVAEKSPEALNRFKDFFEAAVAYHKYFGGDQ
>CP034791.1|AZT89244.1|68451_69264_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MDVILKGKYIIKCKIKAVTGLHIGEGNNSIEIGGIDNAVVKDAEGKPYIPGSSLKGKMRSLMEFAEGKVKDDLMVVAVKKGDKPEICIHMCDDKECPVCGLFGRNHGKHVTKKEFLKDPKAEGRDFSDAVIPTRLIVRDAKLIESSITDEMKENLDLEWTEVKFENNIDRITSKANPRQSERVPAGAEFSAEFVVNRYEVDGSDDGEKYLSKFIKAMKLLEDDYLGGQGSRGNGKVKFVDIEIFYKDSSDYEKDSNDLKPIATAPSLDQL
>CP034791.1|AZT89245.1|69307_70318_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MGKGKLYRVLMHFTTPLHIGEKEKIYNITQTFAHSDMLMSGIINAYSLLYGNSSTNQLVESFLQKSLPFEISSTMPYVGNEFFVPKPIGLHLHLYKDRGIIEVEKDKEIKKVKFIREKDLLSNFPGKYRVAGSFLQPKDMLHKFGDSEKAPSLGKIKERARVSIDRLSSSSNIYYFSHFEFKDNAGLWFYLRINDQSLEDKVKAAIRLLGDEGLGGDRTCGLGSFKVNFEECSMPEENDRTKYYMSLSLVNPQSEDEIKSALYYEILTRSGYIYSKAGLGIKRKAVRAFAEGTVFSGKVCGRVVDVTPQNFSQHRVYCFGLAFLVPLPEGVMMIGN
>CP034791.1|AZT89246.1|70307_71474_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MATECFESRVYEIEVLTPTIIGGQDKIQSFEFVKDGDCLYFINFDRLFEENLFKESFIDELSRGLSGNLKDFNIRNVMTKYNIDFRRFSKYKLKLEGVQKLSREIVPFVKSAGRFYIPGSSFKGAIRSFVTKALKKDLIKHYEDCLNQKGKVDPQHLSSNADKKVFSSPNESPFKYLQISDSSFVNPDDVAVFEIKVMNICDGQVKWFAGVKEGKTNNVDKPEQSSSIVAEGIKPGVKIFGSMKVEKDFVDGNEVVSGLKEKIGINVLAASPAEFLAEVMRAVVKDYIQREINFYSKYNQAQIVSEYHKLLNILNSLEQNQFLIQIGFSTGYLSKTVGIFFTKTHFEKLKMIDQKSRIYPDLFPKTRRIIFKNGQVYTVPGWIKITIR
>CP034791.1|AZT89247.1|71470_72094_+|hypothetical-protein
MMGCDEKMAKYFTFHFWAREDGVFLPSSYYSKVYEALKSLLATEQFTISPIKTKNKKEVEDGIWVFEDFRIYLATPFLELVTQNILKIYENLNALFDGIYLKRISCRTQQPKTIGNLLSGVFAQKDGACLEYDRQPEIFSEMLRRQLLSIYYQRFGAYPEDQRFFFVIKDGLKKQHLIESRIEYFGKYEIFASRELLEMFCQMFCIK
>CP034791.1|AZT89248.1|72410_72644_-|hypothetical-protein
MGDFASNVARLLDEAKTKDFNLGLQQGLQQGLQQGIRESQVKIAKKMIQKGAKDEEIAELTELDIEEIKKLRKELLN

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Crispr_ID: CP034791_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034791_7

79838-80001

TypeIII

Consensus_repeat	Method
GTTTCGATCCCCAAAGGGGAGGCTACAAACTC	PILER-CR

2 spacers

cas6,csm5gr7,csm4gr5,csm3gr7,csx1,cas3,cas5

The CRISPR arrays of CP034791_7

>merge|CP034791|7|79838-80001|PILER-CR
GTTTCGATCCCCAAAGGGGAGGCTACAAACTCAGGGTTTGAGTTATCAGGGTTTGAGTTGCTTCTGTTTCGATCCCCAAAGGGGAGGCTACAAACTCTTTTATCACTTCGCTTTTTTGATGAAAGCCATCAAGTTTCGATCCCCAAAGGGGAGGCTACAAACAG

>CP034791|7|6|79838-80001|PILER-CR
GTTTCGATCCCCAAAGGGGAGGCTACAAACTC	AGGGTTTGAGTTATCAGGGTTTGAGTTGCTTCT
GTTTCGATCCCCAAAGGGGAGGCTACAAACTC	TTTTATCACTTCGCTTTTTTGATGAAAGCCATCAA
GTTTCGATCCCCAAAGGGGAGGCTACAAACAG

Protein	Signature genes	Signature genes Name	Protein_function
CP034791.1\|AZT89259.1\|90700_90958_-\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89249.1\|73060_74290_-\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
CP034791.1\|AZT89253.1\|78966_79632_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89254.1\|81645_84042_+\|DUF4433-domain-containing-protein	unknown	unknown	gnl\|CDD\|373093
CP034791.1\|AZT89258.1\|89182_90175_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|368098
CP034791.1\|AZT89244.1\|68451_69264_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
CP034791.1\|AZT89263.1\|97091_97823_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|131641
CP034791.1\|AZT89246.1\|70307_71474_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl\|CDD\|273863
CP034791.1\|AZT89248.1\|72410_72644_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273806
CP034791.1\|AZT89247.1\|71470_72094_+\|hypothetical-protein	cas6	mkCas0062_cas6_CAS-I:CAS-III	unknown
CP034791.1\|AZT89257.1\|87311_87998_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89251.1\|76187_76961_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89250.1\|74372_76112_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89245.1\|69307_70318_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	cd09663_csm4gr5_CAS-III-A	gnl\|CDD\|273866
CP034791.1\|AZT89252.1\|77025_78861_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89260.1\|90954_91944_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|368098
CP034791.1\|AZT89255.1\|84032_84725_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89262.1\|94642_97117_-\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
CP034791.1\|AZT89256.1\|84760_87310_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223288
CP034791.1\|AZT89261.1\|93077_94406_+\|TIGR02221-family-CRISPR-associated-protein	csx1	cd09732_csx1_CAS-III	gnl\|CDD\|187863

Protein	Function_ID	Function_description	E-value
CP034791.1\|AZT89248.1\|72410_72644_-\|hypothetical-protein	gnl\|CDD\|273806	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase). Several lines of evidence suggest that members of this family (loaded as a fragment mode model to find part-length matches) are associated with transposition, inversion, or recombination. Members are found in small numbers of genomes, but in large copy numbers in many of those species, including over 30 full length and fragmentary members in Treponema denticola. The strongest similarities are usually within rather than between species. PSI-BLAST shows similarity to proteins designated as possible transposases, DNA invertases (resolvases), and recombinases. In the oral pathogenic spirochete Treponema denticola, full-length members are often found near transporters or other membrane proteins. This family includes members of the putative transposase family pfam04754.	8.21577e-07
CP034791.1\|AZT89254.1\|81645_84042_+\|DUF4433-domain-containing-protein	gnl\|CDD\|373093	pfam14487, DUF4433, Domain of unknown function (DUF4433). This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 201 and 230 amino acids in length. There is a single completely conserved residue E that may be functionally important. This family is distantly similar to pfam01885 suggesting these may be ADP-ribosylases.	4.41245e-15
CP034791.1\|AZT89244.1\|68451_69264_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	4.79574e-77
CP034791.1\|AZT89263.1\|97091_97823_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	3.30247e-30
CP034791.1\|AZT89249.1\|73060_74290_-\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	9.97583e-65
CP034791.1\|AZT89258.1\|89182_90175_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|368098	pfam04754, Transposase_31, Putative transposase, YhgA-like. This family of putative transposases includes the YhgA sequence from Escherichia coli and several prokaryotic homologs.	7.24722e-20
CP034791.1\|AZT89245.1\|69307_70318_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl\|CDD\|273866	TIGR01903, Hypothetical_protein., CRISPR type III-A/MTUBE-associated RAMP protein Csm4. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. Members of this cas gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm4, for CRISPR/cas Subtype Mtube, protein 4.	5.00699e-54
CP034791.1\|AZT89260.1\|90954_91944_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|368098	pfam04754, Transposase_31, Putative transposase, YhgA-like. This family of putative transposases includes the YhgA sequence from Escherichia coli and several prokaryotic homologs.	5.74834e-19
CP034791.1\|AZT89262.1\|94642_97117_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	4.74756e-52
CP034791.1\|AZT89246.1\|70307_71474_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|273863	TIGR01899, cas_TM1807_csm5, CRISPR type III-A/MTUBE-associated RAMP protein Csm5. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. Members of this cas gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm5, for CRISPR/cas Subtype Mtube, protein 5.	1.60456e-20
CP034791.1\|AZT89256.1\|84760_87310_+\|hypothetical-protein	gnl\|CDD\|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	9.31014e-12
CP034791.1\|AZT89261.1\|93077_94406_+\|TIGR02221-family-CRISPR-associated-protein	gnl\|CDD\|187863	cd09732, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as TM1812 family.	1.06509e-38

>CP034791.1|AZT89253.1|78966_79632_+|hypothetical-protein
MFVKDAYVGTQSKTTSSTKKTSYKSNIYEVERKYISFSGTDAVAFIQFPNTEPFVIGQVQGIEYAIYREKIPVRTLGRISPKGVARGGVTIAGSIYWALLKENLVEDIRKRVEYLVDIPNLRADELPPFDLFIFFANEYGATAYMVIYGIDIVDAHQTLMITNVLTENVWTFMTREIEEVKAGTKASGFGSPSFNLQRGGYKPSMTSLKSKLISSTNFTIT
>CP034791.1|AZT89252.1|77025_78861_+|hypothetical-protein
MLLVKKKISIIIVLTLLLVNVVVFAVDTNFTPIIKPTPFVMEYICGGLGKCVDGPLSKSSFIYPTAIFNDENSNSIYVGDAFLIRKISNGQVETIFNFKNSSNLKNVLYNSIYNHARFGVEYDRIDPKYFQKYLDNPSLIEKTVKYSINNMRINSLFLTGNKLYVYFTIVEPVYSVSFYYDVKRRSYAMVDIVYEINLKTKEEKMVLSKGDNHYFDFAFFEEKPRLDDNGNIVTKYDDKLFVMRDDVKYINGVPYGYMYKPSTLFYPKFMKYNDRFLYIGKLLIDTQTNEVFDTDLNKVVMAKDILSKADFYTIGYNDKAGDYLVNNSIITYSIGAIKKVIPKSKYINNSTLSNNLSTFDIHGWIFSPNRYATGNILPVIDQKYGRVYNFLYDSDYGGIGIFRLDKDSMDTFFDLTRDDNPVLAVDGHLFPVFHEVVYWLNAPEGEIREVKGKKPVGGLRDVFVNKDESMYIIDFAGQIFKIYPKVKFGSQNKKLVVRSSNVDFIFRKMGTLGEISDYILQNNQPCIEVKELERMFGLTITTSKDGTVTIENPYVMESYSVKADIVKGSKHYVNYKKVEKAINETVTNKQYWMFSYDEYNNVLSIATVYVE
>CP034791.1|AZT89251.1|76187_76961_+|hypothetical-protein
MATTKQDYLRTYTSFSGADILVSFGPKVIGELQSISWGIEREKAPVYTLGSPNPRSFSRGKRGIAGKMTFAVFDYDALRKALVEDTNVWNQIAPYAMFTAAPNATQSVNTEYEKVALEMSLWNAKASDVNNSSAGSAFGPTGTNSKTGTIDLPEGASINVPPGFEILKAENIIYADMIPPFDVTITFANEYGQAAFMKIYDCEILNEASGVSVDTIVMERDLTYVARRISPIMKGVYTREAKDDYTLITPKPVVEGI
>CP034791.1|AZT89250.1|74372_76112_+|hypothetical-protein
MSNSNIIVDSVEVYADGTKLDTTAYTVDTTNNTVTLLENKTKGGALITIKYKYTTTDSSGATVTLSVTENGYVDSTTGQFVDFVATPQDTEFTLTYVPDATAFTLYIDGATAPTGTYTVDAQNKKVVVKGGYFNLNAKAEARYYYHVQEVTRPTIELTTKYGGYIYNRCKVKVDVVKNQAGEVIGKVVIIDKPLSKKASASELPLTYSTVDYPTFSLLVRAINNDPRNDFVEAVTEYENEPSTSIALMPETNFEGGDDGLNLSKEEIFKILSGERDENGYLVKEGIYHQLENYQVDYVVPLGVYADDELLDKNANFAYELAMCCANMSIRGKYTVGVIATRSPLKAGLADINEYANKLANLDTACYVKDKEGNIIKDADGNPVDIGKFLIIVGGPDLILKNTRFGVYTANSPAVLAGMMSALPAGASPTNKKVEGVLGLRFQFSNAQRDKILGNRIVVYKQKPNGDIVVEDGVTAARPTSDYTRISTIKSVKEAVDAIYEVTEPFIGQPNTVANRNAMSVAISKRLGQMKEAGIINDYKFNIISTLYDQLLGNVKIELTIVPAFEIRSITTIVSLKPTL
>CP034791.1|AZT89249.1|73060_74290_-|IS256-family-transposase
MEKNEIFETAKNMAIEQVLNMYCSKDDPTRPALKQLLENLLDCFMLSERTVYLAKNENDKGNGFYDRKLATPVGSLEISVPRTRSGNFRPSILPDRYKRVDSSYTDLLMSLVANGYSESSLVQTLKSTNLPYSEDEIEKIKSDLKNELQLFKQRELPENTFALIIDGYHCEIKDNSKVKQATCYVVLGIDLEGKKDIFGIYTFFGKENKADWMRVFDDLITRGLKKVLIVVSDDFPGIIDAVRLAYPLAHHQLCFVHLQRNVRKHIAKDDASVFNKELDKLRTSSSDFDEAVLKFKELCNHYSSKYPRFIKGICEKAEFYLAHMKYPEDLRKHIYTTNAVESVNSIIEKIRINSGGYFQSVEILEINIYLQRENLRRGKWKNGIPILKKCSYNILQLYNMRYEMETQNS
>CP034791.1|AZT89248.1|72410_72644_-|hypothetical-protein
MGDFASNVARLLDEAKTKDFNLGLQQGLQQGLQQGIRESQVKIAKKMIQKGAKDEEIAELTELDIEEIKKLRKELLN
>CP034791.1|AZT89247.1|71470_72094_+|hypothetical-protein
MMGCDEKMAKYFTFHFWAREDGVFLPSSYYSKVYEALKSLLATEQFTISPIKTKNKKEVEDGIWVFEDFRIYLATPFLELVTQNILKIYENLNALFDGIYLKRISCRTQQPKTIGNLLSGVFAQKDGACLEYDRQPEIFSEMLRRQLLSIYYQRFGAYPEDQRFFFVIKDGLKKQHLIESRIEYFGKYEIFASRELLEMFCQMFCIK
>CP034791.1|AZT89246.1|70307_71474_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MATECFESRVYEIEVLTPTIIGGQDKIQSFEFVKDGDCLYFINFDRLFEENLFKESFIDELSRGLSGNLKDFNIRNVMTKYNIDFRRFSKYKLKLEGVQKLSREIVPFVKSAGRFYIPGSSFKGAIRSFVTKALKKDLIKHYEDCLNQKGKVDPQHLSSNADKKVFSSPNESPFKYLQISDSSFVNPDDVAVFEIKVMNICDGQVKWFAGVKEGKTNNVDKPEQSSSIVAEGIKPGVKIFGSMKVEKDFVDGNEVVSGLKEKIGINVLAASPAEFLAEVMRAVVKDYIQREINFYSKYNQAQIVSEYHKLLNILNSLEQNQFLIQIGFSTGYLSKTVGIFFTKTHFEKLKMIDQKSRIYPDLFPKTRRIIFKNGQVYTVPGWIKITIR
>CP034791.1|AZT89245.1|69307_70318_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MGKGKLYRVLMHFTTPLHIGEKEKIYNITQTFAHSDMLMSGIINAYSLLYGNSSTNQLVESFLQKSLPFEISSTMPYVGNEFFVPKPIGLHLHLYKDRGIIEVEKDKEIKKVKFIREKDLLSNFPGKYRVAGSFLQPKDMLHKFGDSEKAPSLGKIKERARVSIDRLSSSSNIYYFSHFEFKDNAGLWFYLRINDQSLEDKVKAAIRLLGDEGLGGDRTCGLGSFKVNFEECSMPEENDRTKYYMSLSLVNPQSEDEIKSALYYEILTRSGYIYSKAGLGIKRKAVRAFAEGTVFSGKVCGRVVDVTPQNFSQHRVYCFGLAFLVPLPEGVMMIGN
>CP034791.1|AZT89244.1|68451_69264_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MDVILKGKYIIKCKIKAVTGLHIGEGNNSIEIGGIDNAVVKDAEGKPYIPGSSLKGKMRSLMEFAEGKVKDDLMVVAVKKGDKPEICIHMCDDKECPVCGLFGRNHGKHVTKKEFLKDPKAEGRDFSDAVIPTRLIVRDAKLIESSITDEMKENLDLEWTEVKFENNIDRITSKANPRQSERVPAGAEFSAEFVVNRYEVDGSDDGEKYLSKFIKAMKLLEDDYLGGQGSRGNGKVKFVDIEIFYKDSSDYEKDSNDLKPIATAPSLDQL
>CP034791.1|AZT89254.1|81645_84042_+|DUF4433-domain-containing-protein
MKKSSPYESLMERIENIILQSEENKKIWIIFSEQSEEQSFLEFAKLSGIDDISAGSLIVFYLDVLYKYGINIDQLFEEPLDDYFGRCKYTVDDKEISKLFYEQDFYKKLKQCYGQWIKDIISNINELIIRRGYNKVEDVSISKTGNIKRLKKIADKVNEIIYNNISLENKIKELEERLGIEEIEKDKIFENITNQQNELNEITRRYDQIIKKNQVLKQEHENRIKILEEKRQSLLIEKEKLFNKKTELILLITTKREENAILRKKYESEKSKLYFKKEMTKFFDNITGNIAFLKKIIDGVKTGQAKDFSKLCRETLDRISDNENHIKVWSEEIKRIKERIKKIDTELDLIKKEFASERLRFEESTKEYNSIANIIEEKKKTIEDKIKKAREKENSINNIIKEINEIRKRLFTSQEVERLIELSNLLLCSSEILVKEVYDKIKIYIEENFRDQIDAINVLKLKIISLLYLVLLHSGKIENEYIYFLVEEGIEISKLDYDLLKGLLGKYFEIDYFTLKQNYEEYEDFNYDLLQQEKEENRNFENNEPSDYINELNDIGDLTKANRYEGEEEEKTSYLEFRDISVEERRIRLKESVEERKIEYLVHFTNLKNLKSIMTNGIIPVGYHDKYKISACINDSSRYDKCLDASSLSISFPNYRMFYKVRINNPSERWVIILLDPSIIWKKDCAFNRTNAANNQMSSTSLQYRKTIQAFNDMFGDEKLRKEIGLPSYFTTDPQAEVLVFDIIEPEYIRKIVVEKEEDREYILNTLSLNDEMVIVDVKYFRPRFDFNYWRGEDLIWL
>CP034791.1|AZT89255.1|84032_84725_+|hypothetical-protein
MAVRPVFLSTDPEEEELVKVVDVEFEWYAGFSLSQKQKCIESLHKNFIKEFGSKNILEISTKSNNKLGVELSAFNLKIYYEPLKKLVPVENVFQASKVFEGNVQYLDLLEKTPIEAKKDSRLRNSGKLIYFKYNETKWELEPKTLFYDWLYINALYNNKELAEKIISYEAFTDIEFNPEKSYNCQARSAALYVSFYKRKLFPDILDVEFYKSYVNKNSKRSSNLQQISFE
>CP034791.1|AZT89256.1|84760_87310_+|hypothetical-protein
MLLVRDQMMKKMKKEKNKKKILKILSFAREIQQIGKEELRNSLYIRKIKGCREPIFKFRLNTNERVLFMFGSDIEDLREEFKNAIVLIDYCNHDSQIIKARRIESINANKIEEDLKIEMWTSEDEFDNEINALYKNYKFCVNQEMNIVISDQFMKYLIEDDSEEYLYYLNDEQYECLKNSTLATIVKGSAGSGKTTILLHKLGMLAGDKLKVGYFTYTSYLRDRAENIYSKYWKYDKSKIYFYSLIDFLLRTTGISMDRVVTLNRFKQWYMNTVGRFYKFHYIDVWTEIKGIIKGCMGINWIRDRAIPVEFLDDRIAEFFEKKGYIKRHSDRWILHTQKSLNEIKEELYREGYKGEREILVIENLKKYFYRLHNLIDTAKSGLDEEYYLELPEDYSIFSYEDRKEIYQIYLKYNEWLKESNLFDEDDLALIVIEKIKRNEIEKFDFLLVDEIQDLSEVEIYALINLVKNKENIIATGDVHQIINPTFFSFGRVANYFSCIDVNFKEFCLKKNYRSQEQIVALANKMCEFRKKYIGALSDDILEVSIRSGEKPWIVPLDKNNLEKAVEFVSTTKSSVLVVEDEDTKNKIASKYNILEKTFTVHEAKGLEFNYVICLNLISKHEDVWMDILSGVAKRISKYRYFFNLFYVAITRCKRWLIIMEENPYIDIIEALKGYIWYSDVLEIDEKMLEISSIEERYQYARMLEQKEMLKEAISAYEKLGSEKDVLRCRIKLQAEATGYEKAGDRLLEIEEFEEAAKYYFKALCYEKMIKAKILAGNYINREDILKEDMNEYNITWPGLLSKFDDREIVQLYHKYFSGKCEKIKNLFNDIDFYINYSAEMLKIIDGGK
>CP034791.1|AZT89257.1|87311_87998_+|hypothetical-protein
MDANSKITEIAESFEKLYDDVHKIVELLVKFNEVLELLSKTLEKVKLYAETSETLEKLNAIGISIIEVTKSMEKGAIEFKERELNEIEKIQKYFQEVVSRTEESFSQFFETSKNLINELNKNINNLMQETNNWFDENRIRMEEIFKIQQESYQKLMQTNNYMKRKMELLIQNMESEYKQLMELVDFIVIQKNNYSKINKKILINILRQNDKSYEIVLKPRSNPRHPKY
>CP034791.1|AZT89258.1|89182_90175_-|Rpn-family-recombination-promoting-nuclease/putative-transposase
MNNLLPHNINDLEYKYIFSNKSIFLRFLKRLDEIGVFKNLTEDQLERIDKSYVLPDFSEQESDILYKVNLKEKEIIFYILFEHQSTVDHSMSIRLLFYITDIYRDYVKDFDKGEIRKKGFTLPAVVPIVFYDGEDRWTATRRLREKILGFEEFGNCVIDFEYILIDLNQAESILQVKDILSLILKLNRIKRYEELERLFLELREYLWGAEEKEIEVLKVCLPVALRELEEIEVEAAKRAIDETVRGGEKAMPLFQNLRKIREELIFEGLQQGIQQGIQQGIEQGIRQGFEQSKIETAERMILKGYKDEEIAEITGLSFEKIKELRAKHRN
>CP034791.1|AZT89259.1|90700_90958_-|hypothetical-protein
MIEILKNILLPQAFLVLLVAFIVLASSSRIEISLFELLFKRQFILFHFDQKSYLSTSGRKILRFDLYAVSMLRHVGLLDVLVPAG
>CP034791.1|AZT89260.1|90954_91944_-|Rpn-family-recombination-promoting-nuclease/putative-transposase
MNSELPSMEHDTTFKFLLKDKKELLLLVKDILKYKWAEEIEEESIEFDDSEFVTQHFSQLRADIVAKAKLKNREMYFYILIENQSTVRRDMAQKILKYMVSLWWNELSKGVENLPPVIPIVVYNGIKEKWNISTDLMEAFETFKDDVFRYRVVDVFEIDVKKILEEEKDLLTPIVFYLEQVREDRDELIRRLLEVEKNLEKLSKENIDRFLRWVYYIIRPRLLEEQREEYERVVERVKQGGAEKMGDFVSNVARLLDEAKTKEFNLGLQQGLQQGLQQGLQQGFQQGFEQSRIETAERMILKGYKDEEIAEITGLSLERIKELRAKHRN
>CP034791.1|AZT89261.1|93077_94406_+|TIGR02221-family-CRISPR-associated-protein
MNVHKASNILISVIGKGRLKKDQTVGYEQTEYVFNPDKKKNKRYTASKTAFFGIALYEYLRNVESINIDKFIIIGTNKSAWSELYQILPHDVQSSEGITEMCLKVYEEEKKGISEQTLLEWQNTLTKYVPSLKFHKIEPVELGKGIDILLKELDKDGAHNVIFDMTHAFRNIPIVFSYGIMLLKYLRKINNIRIFYGAHDMKEYFSELGGEQSPVIEISFIDKLVKMIEAMATFENSGYFVPILNQLGFGNKEKTYFRLEMNRQPRREIEEIIKGLEDKLNTAEHAYEREIVEIMYREFCEMNRQEKLFQRMYKRSQFFYERKQYLKALILLYEATIVLFADVYNIKDNMNYDAREEARDKLRNEIKNVGSDANSNRLIKDQEEAEILKELEYVRNAAVHGSSSRSNQNYLEDIDSFKILFNSALKVFEKLLRRRDEIKKSF
>CP034791.1|AZT89262.1|94642_97117_-|CRISPR-associated-helicase-Cas3'
MERTSFCFDNKNLSGLFSHPGKDGGIEGAKPLEVHLANTSILANSFASEKNIALCSTKFLSQIAKITALLHDIGKATSFFQTYLFDKKKPKTRLSRHSLISAICVWGTLNRLIEEKKIQEDKAFEGFTAILAFFATLKHHGNLEAASDMILISEDDLELCYEQIENIDKEKFNTLISNIFTLYPEIEIGFLTTDILREFVDLAKDSTKLFKKAFRKLFDTEMKFFFMLNLLYSILLDADKTEAIFGTLVDIPELNLSHIDVDSFRRRIFKPENFENSIKTLRDSAFEEATNCEIDENRRIYTLCLPTGLGKTIISFAFALKLRELAQKRFDSKFRIIYSLPFLSIIEQNYNVISQILSFCDLDITSDIILKHHHLSDIAYKTKDGLQNNQEEIFDKDIAKLLIEGWNSNIIVTTFVQFLESILTNKNSNMRKFHRIANSIIILDEVQAINSEYWFLCKNLFEKMCNSLNCYIILSTATMPFIVDKSRAISIVKPENYFDKLCRTELYFDNNFSKIKLEEFVANFEFEEEKTYLFVMNTVSSAKNLYELINQRFPDMQDEITILTTHIIPKERLRRIEQIKNKKYKIVVSTQLVEAGVDVDFDHVVRDIAPLDSIIQAAGRANREGKKGKSKVTVVELVSDRGRLFATEVYDSLLIDATKKILSQFQKVDESKFAELIFEYYKELARRGVIETSSDDKGTSQKFLEAIYRLLYTSSDSDSAAIGSFKLIEDEPYKIDVFVEADEEAKIIWQRFVEIREIKDFFERKKRFLEIRKSFYDYVISVPKTDNIPANFENLILYVPHSQLNDFYDLMTGFKTKGESYLSF
>CP034791.1|AZT89263.1|97091_97823_-|type-I-B-CRISPR-associated-protein-Cas5
MKVAVFDIKADFGFFGKFYSTSSPITYPFPPFPTIQGMVGAILGLDKKEYLDVLEYGKFRAGIRILTPVKKIRMGINHIDTKEGRWRPIKTKNRQPRTQMRFELLKDPCFRIYATHTSTNVFQKLVEFLQEHKSFFTLSMGLSEFLADFEFVGVFEAFEKDMPDDYVSLCTPIPLSYLDSKADTPLRIEAGKSYFKERMPLYMLRTREVIKYEDVIFEPTGKELLARPSSYVEVQNGENILLF

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Crispr_ID: CP034791_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034791_8

90274-90571

TypeI-B

Consensus_repeat	Method
GTTTCAATCCCCAAAGGGTAGGCTACAAACA	PILER-CR
GTTTCAATCCCCAAAGGGTAGGCTACAAACA	CRISPRCasFinder
GTTTCAATCCCCAAAGGGTAGGCTACAAACA	CRT

4 spacers

csx1,cas3,cas5,cas7,cas8b1,cas2,cas1,cas4

The CRISPR arrays of CP034791_8

>merge|CP034791|8|90274-90571|PILER-CR,CRISPRCasFinder,CRT
GTTTCACTCCCCAAAGGGTAGGCTACAAACATAGGCTTTTCAAACTTCTTGATATAGGTGAACAAGGTTTCAATCCCCAAAGGGTAGGCTACAAACACTGTATGTCATTCCCGATATCAGGACAACAAGAGGCGTTTCAATCCCCAAAGGGTAGGCTACAAACATGTTTATTATGTTTATGCCATAGTGTCGTATAAATGTTTCAATCCCCAAAGGGTAGGCTACAAACAAGACATGGGGTGGAATGTATTCAACAGCTGGAATACCGTTTCAATCCCCAAAGGGCAGGCTACAAACA

>CP034791|8|7|90274-90571|PILER-CR
GTTTCACTCCCCAAAGGGTAGGCTACAAACA	TAGGCTTTTCAAACTTCTTGATATAGGTGAACAAG
GTTTCAATCCCCAAAGGGTAGGCTACAAACA	CTGTATGTCATTCCCGATATCAGGACAACAAGAGGC
GTTTCAATCCCCAAAGGGTAGGCTACAAACA	TGTTTATTATGTTTATGCCATAGTGTCGTATAAAT
GTTTCAATCCCCAAAGGGTAGGCTACAAACA	AGACATGGGGTGGAATGTATTCAACAGCTGGAATACC
GTTTCAATCCCCAAAGGGCAGGCTACAAACA

>CP034791|8|7|90274-90571|CRISPRCasFinder
GTTTCACTCCCCAAAGGGTAGGCTACAAACA	TAGGCTTTTCAAACTTCTTGATATAGGTGAACAAG
GTTTCAATCCCCAAAGGGTAGGCTACAAACA	CTGTATGTCATTCCCGATATCAGGACAACAAGAGGC
GTTTCAATCCCCAAAGGGTAGGCTACAAACA	TGTTTATTATGTTTATGCCATAGTGTCGTATAAAT
GTTTCAATCCCCAAAGGGTAGGCTACAAACA	AGACATGGGGTGGAATGTATTCAACAGCTGGAATACC
GTTTCAATCCCCAAAGGGCAGGCTACAAACA

>CP034791|8|6|90274-90571|CRT
GTTTCACTCCCCAAAGGGTAGGCTACAAACA	TAGGCTTTTCAAACTTCTTGATATAGGTGAACAAG
GTTTCAATCCCCAAAGGGTAGGCTACAAACA	CTGTATGTCATTCCCGATATCAGGACAACAAGAGGC
GTTTCAATCCCCAAAGGGTAGGCTACAAACA	TGTTTATTATGTTTATGCCATAGTGTCGTATAAAT
GTTTCAATCCCCAAAGGGTAGGCTACAAACA	AGACATGGGGTGGAATGTATTCAACAGCTGGAATACC
GTTTCAATCCCCAAAGGGCAGGCTACAAACA

Protein	Signature genes	Signature genes Name	Protein_function
CP034791.1\|AZT89259.1\|90700_90958_-\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89267.1\|101169_102165_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|187853
CP034791.1\|AZT89253.1\|78966_79632_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89254.1\|81645_84042_+\|DUF4433-domain-containing-protein	unknown	unknown	gnl\|CDD\|373093
CP034791.1\|AZT89251.1\|76187_76961_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89265.1\|98878_100810_-\|TIGR02556-family-CRISPR-associated-protein	cas8b1	cd09730_cas8b1_CAS-I-B	gnl\|CDD\|378190
CP034791.1\|AZT89266.1\|100889_101153_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP034791.1\|AZT89263.1\|97091_97823_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|131641
CP034791.1\|AZT89249.1\|73060_74290_-\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
CP034791.1\|AZT89257.1\|87311_87998_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89252.1\|77025_78861_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89264.1\|97845_98829_-\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7	cd09690_cas7_CAS-I-B	gnl\|CDD\|187821
CP034791.1\|AZT89268.1\|102161_102665_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
CP034791.1\|AZT89258.1\|89182_90175_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|368098
CP034791.1\|AZT89250.1\|74372_76112_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89260.1\|90954_91944_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|368098
CP034791.1\|AZT89255.1\|84032_84725_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89262.1\|94642_97117_-\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
CP034791.1\|AZT89256.1\|84760_87310_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223288
CP034791.1\|AZT89261.1\|93077_94406_+\|TIGR02221-family-CRISPR-associated-protein	csx1	cd09732_csx1_CAS-III	gnl\|CDD\|187863

Protein	Function_ID	Function_description	E-value
CP034791.1\|AZT89267.1\|101169_102165_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	7.31593e-168
CP034791.1\|AZT89249.1\|73060_74290_-\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	9.97583e-65
CP034791.1\|AZT89264.1\|97845_98829_-\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	gnl\|CDD\|187821	cd09690, Cas7_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csh2 family.	4.21579e-87
CP034791.1\|AZT89265.1\|98878_100810_-\|TIGR02556-family-CRISPR-associated-protein	gnl\|CDD\|378190	pfam09484, Cas_TM1802, CRISPR-associated protein TM1802 (cas_TM1802). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This minor cas protein is found in at least five prokaryotic genomes: Methanosarcina mazei, Sulfurihydrogenibium azorense, Thermotoga maritima, Carboxydothermus hydrogenoformans, and Dictyoglomus thermophilum, the first of which is archaeal while the rest are bacterial.	2.15426e-108
CP034791.1\|AZT89263.1\|97091_97823_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	3.30247e-30
CP034791.1\|AZT89254.1\|81645_84042_+\|DUF4433-domain-containing-protein	gnl\|CDD\|373093	pfam14487, DUF4433, Domain of unknown function (DUF4433). This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 201 and 230 amino acids in length. There is a single completely conserved residue E that may be functionally important. This family is distantly similar to pfam01885 suggesting these may be ADP-ribosylases.	4.41245e-15
CP034791.1\|AZT89256.1\|84760_87310_+\|hypothetical-protein	gnl\|CDD\|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	9.31014e-12
CP034791.1\|AZT89268.1\|102161_102665_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	5.16267e-57
CP034791.1\|AZT89258.1\|89182_90175_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|368098	pfam04754, Transposase_31, Putative transposase, YhgA-like. This family of putative transposases includes the YhgA sequence from Escherichia coli and several prokaryotic homologs.	7.24722e-20
CP034791.1\|AZT89260.1\|90954_91944_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|368098	pfam04754, Transposase_31, Putative transposase, YhgA-like. This family of putative transposases includes the YhgA sequence from Escherichia coli and several prokaryotic homologs.	5.74834e-19
CP034791.1\|AZT89262.1\|94642_97117_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	4.74756e-52
CP034791.1\|AZT89266.1\|100889_101153_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.04056e-30
CP034791.1\|AZT89261.1\|93077_94406_+\|TIGR02221-family-CRISPR-associated-protein	gnl\|CDD\|187863	cd09732, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as TM1812 family.	1.06509e-38

>CP034791.1|AZT89258.1|89182_90175_-|Rpn-family-recombination-promoting-nuclease/putative-transposase
MNNLLPHNINDLEYKYIFSNKSIFLRFLKRLDEIGVFKNLTEDQLERIDKSYVLPDFSEQESDILYKVNLKEKEIIFYILFEHQSTVDHSMSIRLLFYITDIYRDYVKDFDKGEIRKKGFTLPAVVPIVFYDGEDRWTATRRLREKILGFEEFGNCVIDFEYILIDLNQAESILQVKDILSLILKLNRIKRYEELERLFLELREYLWGAEEKEIEVLKVCLPVALRELEEIEVEAAKRAIDETVRGGEKAMPLFQNLRKIREELIFEGLQQGIQQGIQQGIEQGIRQGFEQSKIETAERMILKGYKDEEIAEITGLSFEKIKELRAKHRN
>CP034791.1|AZT89257.1|87311_87998_+|hypothetical-protein
MDANSKITEIAESFEKLYDDVHKIVELLVKFNEVLELLSKTLEKVKLYAETSETLEKLNAIGISIIEVTKSMEKGAIEFKERELNEIEKIQKYFQEVVSRTEESFSQFFETSKNLINELNKNINNLMQETNNWFDENRIRMEEIFKIQQESYQKLMQTNNYMKRKMELLIQNMESEYKQLMELVDFIVIQKNNYSKINKKILINILRQNDKSYEIVLKPRSNPRHPKY
>CP034791.1|AZT89256.1|84760_87310_+|hypothetical-protein
MLLVRDQMMKKMKKEKNKKKILKILSFAREIQQIGKEELRNSLYIRKIKGCREPIFKFRLNTNERVLFMFGSDIEDLREEFKNAIVLIDYCNHDSQIIKARRIESINANKIEEDLKIEMWTSEDEFDNEINALYKNYKFCVNQEMNIVISDQFMKYLIEDDSEEYLYYLNDEQYECLKNSTLATIVKGSAGSGKTTILLHKLGMLAGDKLKVGYFTYTSYLRDRAENIYSKYWKYDKSKIYFYSLIDFLLRTTGISMDRVVTLNRFKQWYMNTVGRFYKFHYIDVWTEIKGIIKGCMGINWIRDRAIPVEFLDDRIAEFFEKKGYIKRHSDRWILHTQKSLNEIKEELYREGYKGEREILVIENLKKYFYRLHNLIDTAKSGLDEEYYLELPEDYSIFSYEDRKEIYQIYLKYNEWLKESNLFDEDDLALIVIEKIKRNEIEKFDFLLVDEIQDLSEVEIYALINLVKNKENIIATGDVHQIINPTFFSFGRVANYFSCIDVNFKEFCLKKNYRSQEQIVALANKMCEFRKKYIGALSDDILEVSIRSGEKPWIVPLDKNNLEKAVEFVSTTKSSVLVVEDEDTKNKIASKYNILEKTFTVHEAKGLEFNYVICLNLISKHEDVWMDILSGVAKRISKYRYFFNLFYVAITRCKRWLIIMEENPYIDIIEALKGYIWYSDVLEIDEKMLEISSIEERYQYARMLEQKEMLKEAISAYEKLGSEKDVLRCRIKLQAEATGYEKAGDRLLEIEEFEEAAKYYFKALCYEKMIKAKILAGNYINREDILKEDMNEYNITWPGLLSKFDDREIVQLYHKYFSGKCEKIKNLFNDIDFYINYSAEMLKIIDGGK
>CP034791.1|AZT89255.1|84032_84725_+|hypothetical-protein
MAVRPVFLSTDPEEEELVKVVDVEFEWYAGFSLSQKQKCIESLHKNFIKEFGSKNILEISTKSNNKLGVELSAFNLKIYYEPLKKLVPVENVFQASKVFEGNVQYLDLLEKTPIEAKKDSRLRNSGKLIYFKYNETKWELEPKTLFYDWLYINALYNNKELAEKIISYEAFTDIEFNPEKSYNCQARSAALYVSFYKRKLFPDILDVEFYKSYVNKNSKRSSNLQQISFE
>CP034791.1|AZT89254.1|81645_84042_+|DUF4433-domain-containing-protein
MKKSSPYESLMERIENIILQSEENKKIWIIFSEQSEEQSFLEFAKLSGIDDISAGSLIVFYLDVLYKYGINIDQLFEEPLDDYFGRCKYTVDDKEISKLFYEQDFYKKLKQCYGQWIKDIISNINELIIRRGYNKVEDVSISKTGNIKRLKKIADKVNEIIYNNISLENKIKELEERLGIEEIEKDKIFENITNQQNELNEITRRYDQIIKKNQVLKQEHENRIKILEEKRQSLLIEKEKLFNKKTELILLITTKREENAILRKKYESEKSKLYFKKEMTKFFDNITGNIAFLKKIIDGVKTGQAKDFSKLCRETLDRISDNENHIKVWSEEIKRIKERIKKIDTELDLIKKEFASERLRFEESTKEYNSIANIIEEKKKTIEDKIKKAREKENSINNIIKEINEIRKRLFTSQEVERLIELSNLLLCSSEILVKEVYDKIKIYIEENFRDQIDAINVLKLKIISLLYLVLLHSGKIENEYIYFLVEEGIEISKLDYDLLKGLLGKYFEIDYFTLKQNYEEYEDFNYDLLQQEKEENRNFENNEPSDYINELNDIGDLTKANRYEGEEEEKTSYLEFRDISVEERRIRLKESVEERKIEYLVHFTNLKNLKSIMTNGIIPVGYHDKYKISACINDSSRYDKCLDASSLSISFPNYRMFYKVRINNPSERWVIILLDPSIIWKKDCAFNRTNAANNQMSSTSLQYRKTIQAFNDMFGDEKLRKEIGLPSYFTTDPQAEVLVFDIIEPEYIRKIVVEKEEDREYILNTLSLNDEMVIVDVKYFRPRFDFNYWRGEDLIWL
>CP034791.1|AZT89253.1|78966_79632_+|hypothetical-protein
MFVKDAYVGTQSKTTSSTKKTSYKSNIYEVERKYISFSGTDAVAFIQFPNTEPFVIGQVQGIEYAIYREKIPVRTLGRISPKGVARGGVTIAGSIYWALLKENLVEDIRKRVEYLVDIPNLRADELPPFDLFIFFANEYGATAYMVIYGIDIVDAHQTLMITNVLTENVWTFMTREIEEVKAGTKASGFGSPSFNLQRGGYKPSMTSLKSKLISSTNFTIT
>CP034791.1|AZT89252.1|77025_78861_+|hypothetical-protein
MLLVKKKISIIIVLTLLLVNVVVFAVDTNFTPIIKPTPFVMEYICGGLGKCVDGPLSKSSFIYPTAIFNDENSNSIYVGDAFLIRKISNGQVETIFNFKNSSNLKNVLYNSIYNHARFGVEYDRIDPKYFQKYLDNPSLIEKTVKYSINNMRINSLFLTGNKLYVYFTIVEPVYSVSFYYDVKRRSYAMVDIVYEINLKTKEEKMVLSKGDNHYFDFAFFEEKPRLDDNGNIVTKYDDKLFVMRDDVKYINGVPYGYMYKPSTLFYPKFMKYNDRFLYIGKLLIDTQTNEVFDTDLNKVVMAKDILSKADFYTIGYNDKAGDYLVNNSIITYSIGAIKKVIPKSKYINNSTLSNNLSTFDIHGWIFSPNRYATGNILPVIDQKYGRVYNFLYDSDYGGIGIFRLDKDSMDTFFDLTRDDNPVLAVDGHLFPVFHEVVYWLNAPEGEIREVKGKKPVGGLRDVFVNKDESMYIIDFAGQIFKIYPKVKFGSQNKKLVVRSSNVDFIFRKMGTLGEISDYILQNNQPCIEVKELERMFGLTITTSKDGTVTIENPYVMESYSVKADIVKGSKHYVNYKKVEKAINETVTNKQYWMFSYDEYNNVLSIATVYVE
>CP034791.1|AZT89251.1|76187_76961_+|hypothetical-protein
MATTKQDYLRTYTSFSGADILVSFGPKVIGELQSISWGIEREKAPVYTLGSPNPRSFSRGKRGIAGKMTFAVFDYDALRKALVEDTNVWNQIAPYAMFTAAPNATQSVNTEYEKVALEMSLWNAKASDVNNSSAGSAFGPTGTNSKTGTIDLPEGASINVPPGFEILKAENIIYADMIPPFDVTITFANEYGQAAFMKIYDCEILNEASGVSVDTIVMERDLTYVARRISPIMKGVYTREAKDDYTLITPKPVVEGI
>CP034791.1|AZT89250.1|74372_76112_+|hypothetical-protein
MSNSNIIVDSVEVYADGTKLDTTAYTVDTTNNTVTLLENKTKGGALITIKYKYTTTDSSGATVTLSVTENGYVDSTTGQFVDFVATPQDTEFTLTYVPDATAFTLYIDGATAPTGTYTVDAQNKKVVVKGGYFNLNAKAEARYYYHVQEVTRPTIELTTKYGGYIYNRCKVKVDVVKNQAGEVIGKVVIIDKPLSKKASASELPLTYSTVDYPTFSLLVRAINNDPRNDFVEAVTEYENEPSTSIALMPETNFEGGDDGLNLSKEEIFKILSGERDENGYLVKEGIYHQLENYQVDYVVPLGVYADDELLDKNANFAYELAMCCANMSIRGKYTVGVIATRSPLKAGLADINEYANKLANLDTACYVKDKEGNIIKDADGNPVDIGKFLIIVGGPDLILKNTRFGVYTANSPAVLAGMMSALPAGASPTNKKVEGVLGLRFQFSNAQRDKILGNRIVVYKQKPNGDIVVEDGVTAARPTSDYTRISTIKSVKEAVDAIYEVTEPFIGQPNTVANRNAMSVAISKRLGQMKEAGIINDYKFNIISTLYDQLLGNVKIELTIVPAFEIRSITTIVSLKPTL
>CP034791.1|AZT89249.1|73060_74290_-|IS256-family-transposase
MEKNEIFETAKNMAIEQVLNMYCSKDDPTRPALKQLLENLLDCFMLSERTVYLAKNENDKGNGFYDRKLATPVGSLEISVPRTRSGNFRPSILPDRYKRVDSSYTDLLMSLVANGYSESSLVQTLKSTNLPYSEDEIEKIKSDLKNELQLFKQRELPENTFALIIDGYHCEIKDNSKVKQATCYVVLGIDLEGKKDIFGIYTFFGKENKADWMRVFDDLITRGLKKVLIVVSDDFPGIIDAVRLAYPLAHHQLCFVHLQRNVRKHIAKDDASVFNKELDKLRTSSSDFDEAVLKFKELCNHYSSKYPRFIKGICEKAEFYLAHMKYPEDLRKHIYTTNAVESVNSIIEKIRINSGGYFQSVEILEINIYLQRENLRRGKWKNGIPILKKCSYNILQLYNMRYEMETQNS
>CP034791.1|AZT89259.1|90700_90958_-|hypothetical-protein
MIEILKNILLPQAFLVLLVAFIVLASSSRIEISLFELLFKRQFILFHFDQKSYLSTSGRKILRFDLYAVSMLRHVGLLDVLVPAG
>CP034791.1|AZT89260.1|90954_91944_-|Rpn-family-recombination-promoting-nuclease/putative-transposase
MNSELPSMEHDTTFKFLLKDKKELLLLVKDILKYKWAEEIEEESIEFDDSEFVTQHFSQLRADIVAKAKLKNREMYFYILIENQSTVRRDMAQKILKYMVSLWWNELSKGVENLPPVIPIVVYNGIKEKWNISTDLMEAFETFKDDVFRYRVVDVFEIDVKKILEEEKDLLTPIVFYLEQVREDRDELIRRLLEVEKNLEKLSKENIDRFLRWVYYIIRPRLLEEQREEYERVVERVKQGGAEKMGDFVSNVARLLDEAKTKEFNLGLQQGLQQGLQQGLQQGFQQGFEQSRIETAERMILKGYKDEEIAEITGLSLERIKELRAKHRN
>CP034791.1|AZT89261.1|93077_94406_+|TIGR02221-family-CRISPR-associated-protein
MNVHKASNILISVIGKGRLKKDQTVGYEQTEYVFNPDKKKNKRYTASKTAFFGIALYEYLRNVESINIDKFIIIGTNKSAWSELYQILPHDVQSSEGITEMCLKVYEEEKKGISEQTLLEWQNTLTKYVPSLKFHKIEPVELGKGIDILLKELDKDGAHNVIFDMTHAFRNIPIVFSYGIMLLKYLRKINNIRIFYGAHDMKEYFSELGGEQSPVIEISFIDKLVKMIEAMATFENSGYFVPILNQLGFGNKEKTYFRLEMNRQPRREIEEIIKGLEDKLNTAEHAYEREIVEIMYREFCEMNRQEKLFQRMYKRSQFFYERKQYLKALILLYEATIVLFADVYNIKDNMNYDAREEARDKLRNEIKNVGSDANSNRLIKDQEEAEILKELEYVRNAAVHGSSSRSNQNYLEDIDSFKILFNSALKVFEKLLRRRDEIKKSF
>CP034791.1|AZT89262.1|94642_97117_-|CRISPR-associated-helicase-Cas3'
MERTSFCFDNKNLSGLFSHPGKDGGIEGAKPLEVHLANTSILANSFASEKNIALCSTKFLSQIAKITALLHDIGKATSFFQTYLFDKKKPKTRLSRHSLISAICVWGTLNRLIEEKKIQEDKAFEGFTAILAFFATLKHHGNLEAASDMILISEDDLELCYEQIENIDKEKFNTLISNIFTLYPEIEIGFLTTDILREFVDLAKDSTKLFKKAFRKLFDTEMKFFFMLNLLYSILLDADKTEAIFGTLVDIPELNLSHIDVDSFRRRIFKPENFENSIKTLRDSAFEEATNCEIDENRRIYTLCLPTGLGKTIISFAFALKLRELAQKRFDSKFRIIYSLPFLSIIEQNYNVISQILSFCDLDITSDIILKHHHLSDIAYKTKDGLQNNQEEIFDKDIAKLLIEGWNSNIIVTTFVQFLESILTNKNSNMRKFHRIANSIIILDEVQAINSEYWFLCKNLFEKMCNSLNCYIILSTATMPFIVDKSRAISIVKPENYFDKLCRTELYFDNNFSKIKLEEFVANFEFEEEKTYLFVMNTVSSAKNLYELINQRFPDMQDEITILTTHIIPKERLRRIEQIKNKKYKIVVSTQLVEAGVDVDFDHVVRDIAPLDSIIQAAGRANREGKKGKSKVTVVELVSDRGRLFATEVYDSLLIDATKKILSQFQKVDESKFAELIFEYYKELARRGVIETSSDDKGTSQKFLEAIYRLLYTSSDSDSAAIGSFKLIEDEPYKIDVFVEADEEAKIIWQRFVEIREIKDFFERKKRFLEIRKSFYDYVISVPKTDNIPANFENLILYVPHSQLNDFYDLMTGFKTKGESYLSF
>CP034791.1|AZT89263.1|97091_97823_-|type-I-B-CRISPR-associated-protein-Cas5
MKVAVFDIKADFGFFGKFYSTSSPITYPFPPFPTIQGMVGAILGLDKKEYLDVLEYGKFRAGIRILTPVKKIRMGINHIDTKEGRWRPIKTKNRQPRTQMRFELLKDPCFRIYATHTSTNVFQKLVEFLQEHKSFFTLSMGLSEFLADFEFVGVFEAFEKDMPDDYVSLCTPIPLSYLDSKADTPLRIEAGKSYFKERMPLYMLRTREVIKYEDVIFEPTGKELLARPSSYVEVQNGENILLF
>CP034791.1|AZT89264.1|97845_98829_-|type-I-B-CRISPR-associated-protein-Cas7/Csh2
MENLNNNIIKNRSEILFLYDVTDANPNGDPLDENKPRIDPETDICIVTDVRLKRTCRDYWAEYKNLPVFILREISEDGKLMTKSDKFSKYNLSKEKLKDYIDIRLFGGTTTLKSKDEKRKSKSDEDSSEETGAITFTGPVQFKFGRSLHKVEYMLVKGTTVMPSGEGKDQGTFTECYILPYALIAFYGVVNENAALCQELPVTEEDVQLLLEALWCGTKNLISRSKFGQMPRLLVRVEYNQSGFYIGELDKLVKLISQKSDTAIRSPEDFQLDITRLVEKFTKYQDKIQKIEVAVDDSLSFVCEGKPVELKDALSFLVDRVKVLKFD
>CP034791.1|AZT89265.1|98878_100810_-|TIGR02556-family-CRISPR-associated-protein
MIEAVAELGRFVLEGKSKSVSQEGSSSDVLSNNLSSFLSRIESEKILFILLNQNQGKFEYCGLELQDPMESRTQFYLFSQGAKGGGTNFSPTCTLVKPKATKNMSEAQIKDNIKSQVEKTFQQKVENWFSNKAQPLAKKFSKLKILTQSDADFIEKITQAIKEQRKRIIDDISQTIYDIELKKGNSILLSFLINGKYIGEYEIFKLFLLELIKEKNQRSSSQDKTCSLCKQKRENVSGMVNVFKFYTIDKPGFIKGGFSPENAWKNFPVCSSCQTHLSEGRKYLEQNLQFKFYNFRYLLIPKFTLGFDSEYAEILDILEKTQKDIRLGERKLEHITDDENEILEIVSEFNDSMSVTFLFLTTQMGAERIVLLIEDVFPSHLKNIFDAKRHTEKKFRKLFDNPDIDFTFQQIKHFFSKSNRLRKKPDLDSYFLEITESIFKKKPIDFDFLLSHFCRRLQDDIVNSDLSAFYVSCSYAMEVLEFLSKLNILKLKGDEMNMPFETPFDEILNEFPVASANPAVKGIILVGALCDMLLRIQSAGLKKAPGRMPPFAKNLKGLRLKQADIISLLPKIENKLMEYSAFGKAKKLVAATASELLLKAPADWKLSSDEVSFYFACGMNLGQKIRDLAKKLTNDTEEAEDEE
>CP034791.1|AZT89266.1|100889_101153_-|CRISPR-associated-endonuclease-Cas2
MYTILVYDVNEKRVAKALKVCRKYLNWVQNSVFEGEISEAKLKKLKFELSQKLNLEEDSVIIYNFQSRLYSQREILGVEKNNLDRFI
>CP034791.1|AZT89267.1|101169_102165_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MKRPIYIFSDGVLRRKNNTLYFESEGVQKFIPVENTSEIYIFGEVELNKRFLEFLTQSEIILHFFNRYGYYVGSFYPREYLNSGYMILKQAEHYLDTQKRLSLARTFVEGGYKNMRQVLKYYQSRGIDELERYIQQMENLFGSVSNINDINSLMAIEGNIRQTYYSAFDLIIDKDDFKFEKRSKRPPKNALNTLISFGNSMMYTIVLSEIYRTHLDPRIGYLHATNFRRFTLNLDVAEIFKPIIVDRLIFSIISKNMLKPEHFEQDLEGIVIRDDAKKLFIDELEQRLSTTISVKNIGNYVSYRQLIRIELYKIEKHLMGEKEYQPYVTQW
>CP034791.1|AZT89268.1|102161_102665_-|CRISPR-associated-protein-Cas4
MEKTIDVKGSILQAYIVCKRQAWLLSRNIGPSPDNPFLEIGKLISQEYYKHDKKEVYFDGVVLDLIRQENEVLLVGEIKKSSRAKSAAILQLKFYLYKLFKNNINAHGKLLIPEEKKTFDVQLSFDDITEIENLIEEISLFLSSPSPPQPQKIKACSKCSYKEFCWA

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Crispr_ID: CP034791_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034791_9

92120-92548

TypeI-B

Consensus_repeat	Method
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	CRISPRCasFinder
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	CRT
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	PILER-CR

6 spacers

csx1,cas3,cas5,cas7,cas8b1,cas2,cas1,cas4,csx20

The CRISPR arrays of CP034791_9

>merge|CP034791|9|92120-92548|CRISPRCasFinder,CRT,PILER-CR
TTTTCAATCCCCAAAGGGCAGGCTACAAACCATGAATGGTATAGCTTCATTGGATGAGCTTTTCTCGTTTCAATCCCCAAAGGGCAGGCTACAAACTTGGTATGTTGATGAAGACAAAAAGCTTCATTTTGTGTTTCAATCCCCAAAGGGCAGGCTACAAACCTGGTGCAGGGAGAACACAGCAACAACGTATCGCTGGTTTCAATCCCCAAAGGGCAGGCTACAAACTGGTTGCTTTTCTATGTACTGCGTGAGAATTCAAAGCGGTTTCAATCCCCAAAGGGCAGGCTACAAACTCTTTGTAATCCTTTGCTATGTTTTTGTCAGCTGGTTTCAATCCCCAAAGGGCAGGCTACAAACCTTCATACCGGAAGAGACATTGCAATCTAAAAGAAAAACGTTTCAATCCCCAAAGGGCAGGCTACAAAC

>CP034791|9|8|92120-92548|CRISPRCasFinder
TTTTCAATCCCCAAAGGGCAGGCTACAAAC	CATGAATGGTATAGCTTCATTGGATGAGCTTTTCTC
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	TTGGTATGTTGATGAAGACAAAAAGCTTCATTTTGT
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	CTGGTGCAGGGAGAACACAGCAACAACGTATCGCTG
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	TGGTTGCTTTTCTATGTACTGCGTGAGAATTCAAAGCG
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	TCTTTGTAATCCTTTGCTATGTTTTTGTCAGCTG
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	CTTCATACCGGAAGAGACATTGCAATCTAAAAGAAAAAC
GTTTCAATCCCCAAAGGGCAGGCTACAAAC

>CP034791|9|7|92120-92548|CRT
TTTTCAATCCCCAAAGGGCAGGCTACAAAC	CATGAATGGTATAGCTTCATTGGATGAGCTTTTCTC
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	TTGGTATGTTGATGAAGACAAAAAGCTTCATTTTGT
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	CTGGTGCAGGGAGAACACAGCAACAACGTATCGCTG
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	TGGTTGCTTTTCTATGTACTGCGTGAGAATTCAAAGCG
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	TCTTTGTAATCCTTTGCTATGTTTTTGTCAGCTG
GTTTCAATCCCCAAAGGGCAGGCTACAAAC	CTTCATACCGGAAGAGACATTGCAATCTAAAAGAAAAAC
GTTTCAATCCCCAAAGGGCAGGCTACAAAC

>CP034791|9|8|92121-92548|PILER-CR
TTTCAATCCCCAAAGGGCAGGCTACAAACC	ATGAATGGTATAGCTTCATTGGATGAGCTTTTCTCG
TTTCAATCCCCAAAGGGCAGGCTACAAACT	TGGTATGTTGATGAAGACAAAAAGCTTCATTTTGTG
TTTCAATCCCCAAAGGGCAGGCTACAAACC	TGGTGCAGGGAGAACACAGCAACAACGTATCGCTGG
TTTCAATCCCCAAAGGGCAGGCTACAAACT	GGTTGCTTTTCTATGTACTGCGTGAGAATTCAAAGCGG
TTTCAATCCCCAAAGGGCAGGCTACAAACT	CTTTGTAATCCTTTGCTATGTTTTTGTCAGCTGG
TTTCAATCCCCAAAGGGCAGGCTACAAACC	TTCATACCGGAAGAGACATTGCAATCTAAAAGAAAAACG
TTTCAATCCCCAAAGGGCAGGCTACAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP034791.1\|AZT89259.1\|90700_90958_-\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89253.1\|78966_79632_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89254.1\|81645_84042_+\|DUF4433-domain-containing-protein	unknown	unknown	gnl\|CDD\|373093
CP034791.1\|AZT89270.1\|103715_104114_+\|hypothetical-protein	csx20	xls002255_csx20_CAS-I:CAS-III	unknown
CP034791.1\|AZT89251.1\|76187_76961_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89265.1\|98878_100810_-\|TIGR02556-family-CRISPR-associated-protein	cas8b1	cd09730_cas8b1_CAS-I-B	gnl\|CDD\|378190
CP034791.1\|AZT89266.1\|100889_101153_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP034791.1\|AZT89263.1\|97091_97823_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|131641
CP034791.1\|AZT89260.1\|90954_91944_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|368098
CP034791.1\|AZT89257.1\|87311_87998_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89252.1\|77025_78861_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89264.1\|97845_98829_-\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7	cd09690_cas7_CAS-I-B	gnl\|CDD\|187821
CP034791.1\|AZT89268.1\|102161_102665_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
CP034791.1\|AZT89258.1\|89182_90175_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|368098
CP034791.1\|AZT89261.1\|93077_94406_+\|TIGR02221-family-CRISPR-associated-protein	csx1	cd09732_csx1_CAS-III	gnl\|CDD\|187863
CP034791.1\|AZT89255.1\|84032_84725_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89262.1\|94642_97117_-\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
CP034791.1\|AZT89256.1\|84760_87310_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223288
CP034791.1\|AZT89267.1\|101169_102165_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|187853
CP034791.1\|AZT89269.1\|102854_103067_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP034791.1\|AZT89254.1\|81645_84042_+\|DUF4433-domain-containing-protein	gnl\|CDD\|373093	pfam14487, DUF4433, Domain of unknown function (DUF4433). This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 201 and 230 amino acids in length. There is a single completely conserved residue E that may be functionally important. This family is distantly similar to pfam01885 suggesting these may be ADP-ribosylases.	4.41245e-15
CP034791.1\|AZT89264.1\|97845_98829_-\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	gnl\|CDD\|187821	cd09690, Cas7_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csh2 family.	4.21579e-87
CP034791.1\|AZT89265.1\|98878_100810_-\|TIGR02556-family-CRISPR-associated-protein	gnl\|CDD\|378190	pfam09484, Cas_TM1802, CRISPR-associated protein TM1802 (cas_TM1802). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This minor cas protein is found in at least five prokaryotic genomes: Methanosarcina mazei, Sulfurihydrogenibium azorense, Thermotoga maritima, Carboxydothermus hydrogenoformans, and Dictyoglomus thermophilum, the first of which is archaeal while the rest are bacterial.	2.15426e-108
CP034791.1\|AZT89263.1\|97091_97823_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	3.30247e-30
CP034791.1\|AZT89261.1\|93077_94406_+\|TIGR02221-family-CRISPR-associated-protein	gnl\|CDD\|187863	cd09732, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as TM1812 family.	1.06509e-38
CP034791.1\|AZT89256.1\|84760_87310_+\|hypothetical-protein	gnl\|CDD\|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	9.31014e-12
CP034791.1\|AZT89268.1\|102161_102665_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	5.16267e-57
CP034791.1\|AZT89258.1\|89182_90175_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|368098	pfam04754, Transposase_31, Putative transposase, YhgA-like. This family of putative transposases includes the YhgA sequence from Escherichia coli and several prokaryotic homologs.	7.24722e-20
CP034791.1\|AZT89260.1\|90954_91944_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|368098	pfam04754, Transposase_31, Putative transposase, YhgA-like. This family of putative transposases includes the YhgA sequence from Escherichia coli and several prokaryotic homologs.	5.74834e-19
CP034791.1\|AZT89262.1\|94642_97117_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	4.74756e-52
CP034791.1\|AZT89266.1\|100889_101153_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.04056e-30
CP034791.1\|AZT89267.1\|101169_102165_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	7.31593e-168

>CP034791.1|AZT89260.1|90954_91944_-|Rpn-family-recombination-promoting-nuclease/putative-transposase
MNSELPSMEHDTTFKFLLKDKKELLLLVKDILKYKWAEEIEEESIEFDDSEFVTQHFSQLRADIVAKAKLKNREMYFYILIENQSTVRRDMAQKILKYMVSLWWNELSKGVENLPPVIPIVVYNGIKEKWNISTDLMEAFETFKDDVFRYRVVDVFEIDVKKILEEEKDLLTPIVFYLEQVREDRDELIRRLLEVEKNLEKLSKENIDRFLRWVYYIIRPRLLEEQREEYERVVERVKQGGAEKMGDFVSNVARLLDEAKTKEFNLGLQQGLQQGLQQGLQQGFQQGFEQSRIETAERMILKGYKDEEIAEITGLSLERIKELRAKHRN
>CP034791.1|AZT89259.1|90700_90958_-|hypothetical-protein
MIEILKNILLPQAFLVLLVAFIVLASSSRIEISLFELLFKRQFILFHFDQKSYLSTSGRKILRFDLYAVSMLRHVGLLDVLVPAG
>CP034791.1|AZT89258.1|89182_90175_-|Rpn-family-recombination-promoting-nuclease/putative-transposase
MNNLLPHNINDLEYKYIFSNKSIFLRFLKRLDEIGVFKNLTEDQLERIDKSYVLPDFSEQESDILYKVNLKEKEIIFYILFEHQSTVDHSMSIRLLFYITDIYRDYVKDFDKGEIRKKGFTLPAVVPIVFYDGEDRWTATRRLREKILGFEEFGNCVIDFEYILIDLNQAESILQVKDILSLILKLNRIKRYEELERLFLELREYLWGAEEKEIEVLKVCLPVALRELEEIEVEAAKRAIDETVRGGEKAMPLFQNLRKIREELIFEGLQQGIQQGIQQGIEQGIRQGFEQSKIETAERMILKGYKDEEIAEITGLSFEKIKELRAKHRN
>CP034791.1|AZT89257.1|87311_87998_+|hypothetical-protein
MDANSKITEIAESFEKLYDDVHKIVELLVKFNEVLELLSKTLEKVKLYAETSETLEKLNAIGISIIEVTKSMEKGAIEFKERELNEIEKIQKYFQEVVSRTEESFSQFFETSKNLINELNKNINNLMQETNNWFDENRIRMEEIFKIQQESYQKLMQTNNYMKRKMELLIQNMESEYKQLMELVDFIVIQKNNYSKINKKILINILRQNDKSYEIVLKPRSNPRHPKY
>CP034791.1|AZT89256.1|84760_87310_+|hypothetical-protein
MLLVRDQMMKKMKKEKNKKKILKILSFAREIQQIGKEELRNSLYIRKIKGCREPIFKFRLNTNERVLFMFGSDIEDLREEFKNAIVLIDYCNHDSQIIKARRIESINANKIEEDLKIEMWTSEDEFDNEINALYKNYKFCVNQEMNIVISDQFMKYLIEDDSEEYLYYLNDEQYECLKNSTLATIVKGSAGSGKTTILLHKLGMLAGDKLKVGYFTYTSYLRDRAENIYSKYWKYDKSKIYFYSLIDFLLRTTGISMDRVVTLNRFKQWYMNTVGRFYKFHYIDVWTEIKGIIKGCMGINWIRDRAIPVEFLDDRIAEFFEKKGYIKRHSDRWILHTQKSLNEIKEELYREGYKGEREILVIENLKKYFYRLHNLIDTAKSGLDEEYYLELPEDYSIFSYEDRKEIYQIYLKYNEWLKESNLFDEDDLALIVIEKIKRNEIEKFDFLLVDEIQDLSEVEIYALINLVKNKENIIATGDVHQIINPTFFSFGRVANYFSCIDVNFKEFCLKKNYRSQEQIVALANKMCEFRKKYIGALSDDILEVSIRSGEKPWIVPLDKNNLEKAVEFVSTTKSSVLVVEDEDTKNKIASKYNILEKTFTVHEAKGLEFNYVICLNLISKHEDVWMDILSGVAKRISKYRYFFNLFYVAITRCKRWLIIMEENPYIDIIEALKGYIWYSDVLEIDEKMLEISSIEERYQYARMLEQKEMLKEAISAYEKLGSEKDVLRCRIKLQAEATGYEKAGDRLLEIEEFEEAAKYYFKALCYEKMIKAKILAGNYINREDILKEDMNEYNITWPGLLSKFDDREIVQLYHKYFSGKCEKIKNLFNDIDFYINYSAEMLKIIDGGK
>CP034791.1|AZT89255.1|84032_84725_+|hypothetical-protein
MAVRPVFLSTDPEEEELVKVVDVEFEWYAGFSLSQKQKCIESLHKNFIKEFGSKNILEISTKSNNKLGVELSAFNLKIYYEPLKKLVPVENVFQASKVFEGNVQYLDLLEKTPIEAKKDSRLRNSGKLIYFKYNETKWELEPKTLFYDWLYINALYNNKELAEKIISYEAFTDIEFNPEKSYNCQARSAALYVSFYKRKLFPDILDVEFYKSYVNKNSKRSSNLQQISFE
>CP034791.1|AZT89254.1|81645_84042_+|DUF4433-domain-containing-protein
MKKSSPYESLMERIENIILQSEENKKIWIIFSEQSEEQSFLEFAKLSGIDDISAGSLIVFYLDVLYKYGINIDQLFEEPLDDYFGRCKYTVDDKEISKLFYEQDFYKKLKQCYGQWIKDIISNINELIIRRGYNKVEDVSISKTGNIKRLKKIADKVNEIIYNNISLENKIKELEERLGIEEIEKDKIFENITNQQNELNEITRRYDQIIKKNQVLKQEHENRIKILEEKRQSLLIEKEKLFNKKTELILLITTKREENAILRKKYESEKSKLYFKKEMTKFFDNITGNIAFLKKIIDGVKTGQAKDFSKLCRETLDRISDNENHIKVWSEEIKRIKERIKKIDTELDLIKKEFASERLRFEESTKEYNSIANIIEEKKKTIEDKIKKAREKENSINNIIKEINEIRKRLFTSQEVERLIELSNLLLCSSEILVKEVYDKIKIYIEENFRDQIDAINVLKLKIISLLYLVLLHSGKIENEYIYFLVEEGIEISKLDYDLLKGLLGKYFEIDYFTLKQNYEEYEDFNYDLLQQEKEENRNFENNEPSDYINELNDIGDLTKANRYEGEEEEKTSYLEFRDISVEERRIRLKESVEERKIEYLVHFTNLKNLKSIMTNGIIPVGYHDKYKISACINDSSRYDKCLDASSLSISFPNYRMFYKVRINNPSERWVIILLDPSIIWKKDCAFNRTNAANNQMSSTSLQYRKTIQAFNDMFGDEKLRKEIGLPSYFTTDPQAEVLVFDIIEPEYIRKIVVEKEEDREYILNTLSLNDEMVIVDVKYFRPRFDFNYWRGEDLIWL
>CP034791.1|AZT89253.1|78966_79632_+|hypothetical-protein
MFVKDAYVGTQSKTTSSTKKTSYKSNIYEVERKYISFSGTDAVAFIQFPNTEPFVIGQVQGIEYAIYREKIPVRTLGRISPKGVARGGVTIAGSIYWALLKENLVEDIRKRVEYLVDIPNLRADELPPFDLFIFFANEYGATAYMVIYGIDIVDAHQTLMITNVLTENVWTFMTREIEEVKAGTKASGFGSPSFNLQRGGYKPSMTSLKSKLISSTNFTIT
>CP034791.1|AZT89252.1|77025_78861_+|hypothetical-protein
MLLVKKKISIIIVLTLLLVNVVVFAVDTNFTPIIKPTPFVMEYICGGLGKCVDGPLSKSSFIYPTAIFNDENSNSIYVGDAFLIRKISNGQVETIFNFKNSSNLKNVLYNSIYNHARFGVEYDRIDPKYFQKYLDNPSLIEKTVKYSINNMRINSLFLTGNKLYVYFTIVEPVYSVSFYYDVKRRSYAMVDIVYEINLKTKEEKMVLSKGDNHYFDFAFFEEKPRLDDNGNIVTKYDDKLFVMRDDVKYINGVPYGYMYKPSTLFYPKFMKYNDRFLYIGKLLIDTQTNEVFDTDLNKVVMAKDILSKADFYTIGYNDKAGDYLVNNSIITYSIGAIKKVIPKSKYINNSTLSNNLSTFDIHGWIFSPNRYATGNILPVIDQKYGRVYNFLYDSDYGGIGIFRLDKDSMDTFFDLTRDDNPVLAVDGHLFPVFHEVVYWLNAPEGEIREVKGKKPVGGLRDVFVNKDESMYIIDFAGQIFKIYPKVKFGSQNKKLVVRSSNVDFIFRKMGTLGEISDYILQNNQPCIEVKELERMFGLTITTSKDGTVTIENPYVMESYSVKADIVKGSKHYVNYKKVEKAINETVTNKQYWMFSYDEYNNVLSIATVYVE
>CP034791.1|AZT89251.1|76187_76961_+|hypothetical-protein
MATTKQDYLRTYTSFSGADILVSFGPKVIGELQSISWGIEREKAPVYTLGSPNPRSFSRGKRGIAGKMTFAVFDYDALRKALVEDTNVWNQIAPYAMFTAAPNATQSVNTEYEKVALEMSLWNAKASDVNNSSAGSAFGPTGTNSKTGTIDLPEGASINVPPGFEILKAENIIYADMIPPFDVTITFANEYGQAAFMKIYDCEILNEASGVSVDTIVMERDLTYVARRISPIMKGVYTREAKDDYTLITPKPVVEGI
>CP034791.1|AZT89261.1|93077_94406_+|TIGR02221-family-CRISPR-associated-protein
MNVHKASNILISVIGKGRLKKDQTVGYEQTEYVFNPDKKKNKRYTASKTAFFGIALYEYLRNVESINIDKFIIIGTNKSAWSELYQILPHDVQSSEGITEMCLKVYEEEKKGISEQTLLEWQNTLTKYVPSLKFHKIEPVELGKGIDILLKELDKDGAHNVIFDMTHAFRNIPIVFSYGIMLLKYLRKINNIRIFYGAHDMKEYFSELGGEQSPVIEISFIDKLVKMIEAMATFENSGYFVPILNQLGFGNKEKTYFRLEMNRQPRREIEEIIKGLEDKLNTAEHAYEREIVEIMYREFCEMNRQEKLFQRMYKRSQFFYERKQYLKALILLYEATIVLFADVYNIKDNMNYDAREEARDKLRNEIKNVGSDANSNRLIKDQEEAEILKELEYVRNAAVHGSSSRSNQNYLEDIDSFKILFNSALKVFEKLLRRRDEIKKSF
>CP034791.1|AZT89262.1|94642_97117_-|CRISPR-associated-helicase-Cas3'
MERTSFCFDNKNLSGLFSHPGKDGGIEGAKPLEVHLANTSILANSFASEKNIALCSTKFLSQIAKITALLHDIGKATSFFQTYLFDKKKPKTRLSRHSLISAICVWGTLNRLIEEKKIQEDKAFEGFTAILAFFATLKHHGNLEAASDMILISEDDLELCYEQIENIDKEKFNTLISNIFTLYPEIEIGFLTTDILREFVDLAKDSTKLFKKAFRKLFDTEMKFFFMLNLLYSILLDADKTEAIFGTLVDIPELNLSHIDVDSFRRRIFKPENFENSIKTLRDSAFEEATNCEIDENRRIYTLCLPTGLGKTIISFAFALKLRELAQKRFDSKFRIIYSLPFLSIIEQNYNVISQILSFCDLDITSDIILKHHHLSDIAYKTKDGLQNNQEEIFDKDIAKLLIEGWNSNIIVTTFVQFLESILTNKNSNMRKFHRIANSIIILDEVQAINSEYWFLCKNLFEKMCNSLNCYIILSTATMPFIVDKSRAISIVKPENYFDKLCRTELYFDNNFSKIKLEEFVANFEFEEEKTYLFVMNTVSSAKNLYELINQRFPDMQDEITILTTHIIPKERLRRIEQIKNKKYKIVVSTQLVEAGVDVDFDHVVRDIAPLDSIIQAAGRANREGKKGKSKVTVVELVSDRGRLFATEVYDSLLIDATKKILSQFQKVDESKFAELIFEYYKELARRGVIETSSDDKGTSQKFLEAIYRLLYTSSDSDSAAIGSFKLIEDEPYKIDVFVEADEEAKIIWQRFVEIREIKDFFERKKRFLEIRKSFYDYVISVPKTDNIPANFENLILYVPHSQLNDFYDLMTGFKTKGESYLSF
>CP034791.1|AZT89263.1|97091_97823_-|type-I-B-CRISPR-associated-protein-Cas5
MKVAVFDIKADFGFFGKFYSTSSPITYPFPPFPTIQGMVGAILGLDKKEYLDVLEYGKFRAGIRILTPVKKIRMGINHIDTKEGRWRPIKTKNRQPRTQMRFELLKDPCFRIYATHTSTNVFQKLVEFLQEHKSFFTLSMGLSEFLADFEFVGVFEAFEKDMPDDYVSLCTPIPLSYLDSKADTPLRIEAGKSYFKERMPLYMLRTREVIKYEDVIFEPTGKELLARPSSYVEVQNGENILLF
>CP034791.1|AZT89264.1|97845_98829_-|type-I-B-CRISPR-associated-protein-Cas7/Csh2
MENLNNNIIKNRSEILFLYDVTDANPNGDPLDENKPRIDPETDICIVTDVRLKRTCRDYWAEYKNLPVFILREISEDGKLMTKSDKFSKYNLSKEKLKDYIDIRLFGGTTTLKSKDEKRKSKSDEDSSEETGAITFTGPVQFKFGRSLHKVEYMLVKGTTVMPSGEGKDQGTFTECYILPYALIAFYGVVNENAALCQELPVTEEDVQLLLEALWCGTKNLISRSKFGQMPRLLVRVEYNQSGFYIGELDKLVKLISQKSDTAIRSPEDFQLDITRLVEKFTKYQDKIQKIEVAVDDSLSFVCEGKPVELKDALSFLVDRVKVLKFD
>CP034791.1|AZT89265.1|98878_100810_-|TIGR02556-family-CRISPR-associated-protein
MIEAVAELGRFVLEGKSKSVSQEGSSSDVLSNNLSSFLSRIESEKILFILLNQNQGKFEYCGLELQDPMESRTQFYLFSQGAKGGGTNFSPTCTLVKPKATKNMSEAQIKDNIKSQVEKTFQQKVENWFSNKAQPLAKKFSKLKILTQSDADFIEKITQAIKEQRKRIIDDISQTIYDIELKKGNSILLSFLINGKYIGEYEIFKLFLLELIKEKNQRSSSQDKTCSLCKQKRENVSGMVNVFKFYTIDKPGFIKGGFSPENAWKNFPVCSSCQTHLSEGRKYLEQNLQFKFYNFRYLLIPKFTLGFDSEYAEILDILEKTQKDIRLGERKLEHITDDENEILEIVSEFNDSMSVTFLFLTTQMGAERIVLLIEDVFPSHLKNIFDAKRHTEKKFRKLFDNPDIDFTFQQIKHFFSKSNRLRKKPDLDSYFLEITESIFKKKPIDFDFLLSHFCRRLQDDIVNSDLSAFYVSCSYAMEVLEFLSKLNILKLKGDEMNMPFETPFDEILNEFPVASANPAVKGIILVGALCDMLLRIQSAGLKKAPGRMPPFAKNLKGLRLKQADIISLLPKIENKLMEYSAFGKAKKLVAATASELLLKAPADWKLSSDEVSFYFACGMNLGQKIRDLAKKLTNDTEEAEDEE
>CP034791.1|AZT89266.1|100889_101153_-|CRISPR-associated-endonuclease-Cas2
MYTILVYDVNEKRVAKALKVCRKYLNWVQNSVFEGEISEAKLKKLKFELSQKLNLEEDSVIIYNFQSRLYSQREILGVEKNNLDRFI
>CP034791.1|AZT89267.1|101169_102165_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MKRPIYIFSDGVLRRKNNTLYFESEGVQKFIPVENTSEIYIFGEVELNKRFLEFLTQSEIILHFFNRYGYYVGSFYPREYLNSGYMILKQAEHYLDTQKRLSLARTFVEGGYKNMRQVLKYYQSRGIDELERYIQQMENLFGSVSNINDINSLMAIEGNIRQTYYSAFDLIIDKDDFKFEKRSKRPPKNALNTLISFGNSMMYTIVLSEIYRTHLDPRIGYLHATNFRRFTLNLDVAEIFKPIIVDRLIFSIISKNMLKPEHFEQDLEGIVIRDDAKKLFIDELEQRLSTTISVKNIGNYVSYRQLIRIELYKIEKHLMGEKEYQPYVTQW
>CP034791.1|AZT89268.1|102161_102665_-|CRISPR-associated-protein-Cas4
MEKTIDVKGSILQAYIVCKRQAWLLSRNIGPSPDNPFLEIGKLISQEYYKHDKKEVYFDGVVLDLIRQENEVLLVGEIKKSSRAKSAAILQLKFYLYKLFKNNINAHGKLLIPEEKKTFDVQLSFDDITEIENLIEEISLFLSSPSPPQPQKIKACSKCSYKEFCWA
>CP034791.1|AZT89269.1|102854_103067_-|hypothetical-protein
MKFKKEEISFMTFYLPKTRVLITKYNKVIQLKDELKDLLATLSDEEIYEILVSIFGNQISRFEDFIVERE
>CP034791.1|AZT89270.1|103715_104114_+|hypothetical-protein
MNKLFLIFNHTLTEDQEKEAKDVFKITQIIPLPQHLQDLWSNIPPDVELKSSLFDPITSFLLVNKGEGENYCLIQGDFGATVYLVSWCIKHGFVPIYATTRRTSKEVVRPDGSVEILKVFKHERFRRYILAT

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Crispr_ID: CP034791_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034791_10

110859-111019

TypeI-B

Consensus_repeat	Method
TTCTCATTCCCCAAAGGGAAGGTTACAAAC	CRISPRCasFinder

2 spacers

csx1,csx20

The CRISPR arrays of CP034791_10

>merge|CP034791|10|110859-111019|CRISPRCasFinder
CTCTCAACCTCCAAAGGGCAGGCTACAAACTTGCTCTCTTTTTCAAATGTTTCTGCAGTAATATCTTTCTCATTCCCCAAAGGGAAGGTTACAAACCAATTAATATAGCAAGGAGTGCTGTCATTAAGGTGTTCTCATTCCCCAAAGGGAAGGTTACAAAC

>CP034791|10|9|110859-111019|CRISPRCasFinder
CTCTCAACCTCCAAAGGGCAGGCTACAAAC	TTGCTCTCTTTTTCAAATGTTTCTGCAGTAATATCT
TTCTCATTCCCCAAAGGGAAGGTTACAAAC	CAATTAATATAGCAAGGAGTGCTGTCATTAAGGTG
TTCTCATTCCCCAAAGGGAAGGTTACAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP034791.1\|AZT89278.1\|110244_110757_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89276.1\|109708_109918_+\|DUF2922-domain-containing-protein	unknown	unknown	gnl\|CDD\|378571
CP034791.1\|AZT91598.1\|106342_106945_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89270.1\|103715_104114_+\|hypothetical-protein	csx20	xls002255_csx20_CAS-I:CAS-III	unknown
CP034791.1\|AZT89281.1\|115593_116280_-\|7-cyano-7-deazaguanine-synthase-QueC	unknown	unknown	gnl\|CDD\|223676
CP034791.1\|AZT89274.1\|108758_109217_-\|stage-V-sporulation-protein-AC	unknown	unknown	gnl\|CDD\|131885
CP034791.1\|AZT89273.1\|107696_108710_-\|stage-V-sporulation-protein-AD	unknown	unknown	gnl\|CDD\|236230
CP034791.1\|AZT89275.1\|109429_109642_+\|DUF1659-domain-containing-protein	unknown	unknown	gnl\|CDD\|377933
CP034791.1\|AZT89288.1\|120136_120766_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378065
CP034791.1\|AZT89279.1\|111467_113258_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|223510
CP034791.1\|AZT89271.1\|104481_104907_+\|hypothetical-protein	csx1	cd09728_csx1_CAS-III	gnl\|CDD\|187859
CP034791.1\|AZT89283.1\|116731_117130_-\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|379915
CP034791.1\|AZT89272.1\|107301_107655_-\|stage-V-sporulation-protein-AE	unknown	unknown	gnl\|CDD\|131886
CP034791.1\|AZT89284.1\|117296_117491_+\|MoaD/ThiS-family-protein	unknown	unknown	gnl\|CDD\|225015
CP034791.1\|AZT89282.1\|116315_116690_-\|RidA-family-protein	unknown	unknown	gnl\|CDD\|129116
CP034791.1\|AZT89287.1\|119883_120147_+\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89280.1\|113277_115158_-\|hypothetical-protein	unknown	unknown	unknown
CP034791.1\|AZT89277.1\|110017_110167_+\|YvrJ-family-protein	unknown	unknown	gnl\|CDD\|378969
CP034791.1\|AZT89285.1\|117512_118424_+\|TIGR00269-family-protein	unknown	unknown	gnl\|CDD\|238951
CP034791.1\|AZT89286.1\|118493_119147_-\|putative-7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|188478

Protein	Function_ID	Function_description	E-value
CP034791.1\|AZT89276.1\|109708_109918_+\|DUF2922-domain-containing-protein	gnl\|CDD\|378571	pfam11148, DUF2922, Protein of unknown function (DUF2922). This bacterial family of proteins has no known function.	3.87278e-22
CP034791.1\|AZT89275.1\|109429_109642_+\|DUF1659-domain-containing-protein	gnl\|CDD\|377933	pfam07872, DUF1659, Protein of unknown function (DUF1659). This family consists of hypothetical bacterial proteins of unknown function.	3.48431e-10
CP034791.1\|AZT89281.1\|115593_116280_-\|7-cyano-7-deazaguanine-synthase-QueC	gnl\|CDD\|223676	COG0603, COG0603, Predicted PP-loop superfamily ATPase [General function prediction only].	1.03821e-99
CP034791.1\|AZT89274.1\|108758_109217_-\|stage-V-sporulation-protein-AC	gnl\|CDD\|131885	TIGR02838, stage_V_sporulation_protein_AC, stage V sporulation protein AC. This model describes stage V sporulation protein AC, a paralog of stage V sporulation protein AE. Both are proteins found to present in a species if and only if that species is one of the Firmicutes capable of endospore formation, as of the time of the publication of the genome of Carboxydothermus hydrogenoformans. Mutants in spoVAC have a stage V sproulation defect. [Cellular processes, Sporulation and germination].	3.00331e-67
CP034791.1\|AZT89273.1\|107696_108710_-\|stage-V-sporulation-protein-AD	gnl\|CDD\|236230	PRK08304, PRK08304, stage V sporulation protein AD; Validated.	0
CP034791.1\|AZT89282.1\|116315_116690_-\|RidA-family-protein	gnl\|CDD\|129116	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase. This protein was described initially as an inhibitor of protein synthesis intiation, then as an endoribonuclease active on single-stranded mRNA, endoribonuclease L-PSP. Members of this family, conserved in all domains of life and often with several members per bacterial genome, appear to catalyze a reaction that minimizes toxic by-products from reactions catalyzed by pyridoxal phosphate-dependent enzymes. [Cellular processes, Other].	6.65007e-53
CP034791.1\|AZT89288.1\|120136_120766_+\|hypothetical-protein	gnl\|CDD\|378065	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system. This family was recently identified as belonging to the nucleotidyltransferase superfamily. AbiEii is the cognate toxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	1.67485e-11
CP034791.1\|AZT89279.1\|111467_113258_-\|ATP-binding-protein	gnl\|CDD\|223510	COG0433, COG0433, HerA helicase [Replication, recombination, and repair].	9.28929e-18
CP034791.1\|AZT89271.1\|104481_104907_+\|hypothetical-protein	gnl\|CDD\|187859	cd09728, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as DxTHG family.	4.17142e-12
CP034791.1\|AZT89283.1\|116731_117130_-\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|379915	pfam17032, zinc_ribbon_15, zinc-ribbon family. This zinc-ribbon region is found on a set of largely microsporidia-specific proteins.	3.95325e-15
CP034791.1\|AZT89272.1\|107301_107655_-\|stage-V-sporulation-protein-AE	gnl\|CDD\|131886	TIGR02839, stage_V_sporulation_protein_AE, stage V sporulation protein AE. This model describes stage V sporulation protein AE, a paralog of stage V sporulation protein AC. Both are proteins found to present in a species if and only if that species is one of the Firmicutes capable of endospore formation, as of the time of the publication of the genome of Carboxydothermus hydrogenoformans. Mutants in spoVAE have a stage V sproulation defect. [Cellular processes, Sporulation and germination].	5.59983e-45
CP034791.1\|AZT89284.1\|117296_117491_+\|MoaD/ThiS-family-protein	gnl\|CDD\|225015	COG2104, ThiS, Sulfur transfer protein involved in thiamine biosynthesis [Coenzyme metabolism].	1.15324e-08
CP034791.1\|AZT89285.1\|117512_118424_+\|TIGR00269-family-protein	gnl\|CDD\|238951	cd01993, Alpha_ANH_like_II, This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.	3.86598e-61
CP034791.1\|AZT89277.1\|110017_110167_+\|YvrJ-family-protein	gnl\|CDD\|378969	pfam12841, YvrJ, YvrJ protein family. This family of short proteins are related to B. subtilis YvrJ protein. None of the members of this family have been functionally characterized.	1.24737e-11
CP034791.1\|AZT89286.1\|118493_119147_-\|putative-7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|188478	TIGR03963, rSAM_QueE_Clost, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE, clostridial. Members of this radical SAM domain protein family appear to be the Clostridial form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in preQ0 operons species that lack members of related protein family TIGR03365. [Protein synthesis, tRNA and rRNA base modification].	2.39354e-101

>CP034791.1|AZT89278.1|110244_110757_+|hypothetical-protein
MDKIPRDIIYFVPQYLDSGDGVMLLLLNGEKKVCPMSIRSFTKKLYSMYAIDPLTIKKLISKKIGQKNLLPIVLPDVTFIPVKTRKARVSTDPIFGYVNLSQVFKIDEKEEGFEILFKCGAVLQCFGSAKYFKRRITAASIISDYFSSMWAKGVCTIKEECELENVLSLE
>CP034791.1|AZT89277.1|110017_110167_+|YvrJ-family-protein
MQEIITNIANIGFPIVLCVYLLTRFESKIDKLSDTIDKLSEKIIQIKSN
>CP034791.1|AZT89276.1|109708_109918_+|DUF2922-domain-containing-protein
MLTLVLTFRLQNGKTFRLSIPDPKSNLTAQEVENVMNLIIQKNIFSVSAPIVEKVSARIIDRNVNQLIG
>CP034791.1|AZT89275.1|109429_109642_+|DUF1659-domain-containing-protein
MAANPLTGNLLIKLQNGTTSTGKIRVKTLSYDIRPDAQDLDVYQVAQAIASLQTKPLYTIVRQNNFELVY
>CP034791.1|AZT89274.1|108758_109217_-|stage-V-sporulation-protein-AC
MNLKEKKAKEYQDMVKAHEPRTNLLKNCIFAFVVGGIICDIGQAFLNLYSMYFPKDEAQTLTSITMIFLGAFLTGIGVYDKIGRFAGAGSIVPITGFSNSIVSPAVEYKKEGFVFGVGSKMFLIAGPVLVYGISTSILIGLVYYFVKIFPKI
>CP034791.1|AZT89273.1|107696_108710_-|stage-V-sporulation-protein-AD
MKKVGKSTFKFESCPIISDCFTIVGKKEGEGPLGIFFDMVIEDEYAGQKSWELAEGKILNIAISKLIQKSGFPPDEVDLILSGDLLNQLTSSHFATRDLDIPFIGLYGACSTFALSVGLACVFVDGGFAKNVIAATSSHFCSAEKQFRYPLELGCQRPPTAQWTVTGAASFLIKPEDGTQKPKITHITVGKILDYGIKDPNNMGACMAPAAFDTITTHLEDTKRDFTYYDIIVTGDLGYVGRKLLEELFKKEGKTLPFELFDCGILMFDQKTQDTGAGASGCAASACVFGGYFYKLMLQKTFKRILIVPTGALLSSSTVQLGESIPVIAHALSIEIE
>CP034791.1|AZT89272.1|107301_107655_-|stage-V-sporulation-protein-AE
MDYLIAFVVGGLICVAGQILIDKTKLTSARVLVLFVTLGAILQGLGLYQKLVDIAGAGATVPLPGFGYSLAKGAIEEVKKIGLIGAFTGGVSRTAGGIAAAVFFGYVIALIFNPKSK
>CP034791.1|AZT91598.1|106342_106945_+|hypothetical-protein
MEVLRRLKKRVEVFFITGFVVYLVLSVIVGGFFFNQINRLEAFKVNYHAKIINIFFIEYSHKLSDASDILKHLAEDENVDFSYLRGRIEEYYLNNTLTMTIAKDPNIFEDKEIGKIMTERLNFVVGLTNFLKKIEKKIIEPKNKKAIPQLKPDIEKIIFLLNVLNEDLQSFKDPETKKVYKEYEKEFYEYINKIEKKLLQ
>CP034791.1|AZT89271.1|104481_104907_+|hypothetical-protein
MLGMYLGGKVELYGKYEAIVLEILFDMIERYLSEDIEEIYIDISSGHNIYISAMLEAVRSFAVFTKLMHWIRKEKQPKVFITFPDPIIGRNRKIYQIHIQLQSFAAFFSSPISKKEAVDLNFSFMRNIFTCITILTIRLKR
>CP034791.1|AZT89270.1|103715_104114_+|hypothetical-protein
MNKLFLIFNHTLTEDQEKEAKDVFKITQIIPLPQHLQDLWSNIPPDVELKSSLFDPITSFLLVNKGEGENYCLIQGDFGATVYLVSWCIKHGFVPIYATTRRTSKEVVRPDGSVEILKVFKHERFRRYILAT
>CP034791.1|AZT89279.1|111467_113258_-|ATP-binding-protein
MFNQEISGILMKVDSDFYTRYRAEVWFDYTKKAINEIKEGSLLAIQNFSSSSDKIHYCILEISSILPLHYGLNNDLSGYPGFLVEAAENVYRDWEDQQDEPLDDATKIKCIAIPTNFEIVINSSGKLEIGIESNLPMIGAKAFLLDVDLTNRIINHGIDGQEQIIKIGHLIRDENVKILLKTEELLRLHFGIFGFTGAGKSNLLSTLIRKIMLDVELPVKIVIFDLMSEYSTLLVDLLYSIDQAYIIGLGEKTFVGSVLEVFRSNPEVAEHKKLLIKAAKDMAYSSLYPKGLAKYRDLFTKAFYKILNDKKIKLWQDSGLTLADFVRLHEKQLFKGYLGRSEATLRELVEKMKQVNRPLDVNLCKATIERIKNNYLSGDLNSIARSNLELFVKELENKYRDLTSNSTRPEYTIDQETSLNLLNDGSKKSLLIFQSHDPNDLRNKAYQLGMSIFEDRRRNGIIEPIVSFIFDEADEFIPQDAKDSYERSSEVVMNLARRGRKFGLGVGIATQRITYLNTNIMAQPHTYFVSKLPRKSDQERITDAFGIGEDMFKQTFKFKKGCWLLVSYDAVGLEAVPMPIYVENANDAIERFLIRL
>CP034791.1|AZT89280.1|113277_115158_-|hypothetical-protein
MSKLSQMYSFWKNSITQSKVRFNTNLSSIFQALSGFYENVMPDFAIEWDSLFSNPTFRHQLSQKIESFFQKREINFVAIDGTCTKWESSNYLIFFAGAYGARGKIILAPYSEKIKYEKWDFSRDVTMMAQIPIMPYEIELIASEEEKKFLGISSDKDYQEILNLHVSLMRLAEIYLAYHMASSSTIDMPQIILLDLMPSSLLRIPYVNYKSLGLLGHRFRNDTIKISNVVVSLSHPFNYQLLVPSKKKYRDYSYFLAKVTQAMSQDRTKTTFTYDELCRLTGKNIEDIRRISRFLERNQILTIKEDGIQMDTSPDLCWQYTVEFFEYFCSQLFIKKDPKSLELDFYKDSGTSYQNASHQNFKRVISHDDINFLISVGIRALIEKCWDNNIFLVGIAKDSQSRYFSRNYLKLLVASNLLSAEMKEKMEKYPIPILCSDRLLFENYAYFNRNLNSPWSSVEFDSALSTLFVNEKGEITGVKGHIVADDRIFAKSIAQFFISRKKKIPSMGHAIFIERLLHPSLDKNFLENTLIDSPTLGALCPFIHLDKTYTNWGQAMNMYFLSVLTKNHFPEVIGYPEPLHKADRSAKTLLRFAKGIIKSSDIEEKRFPLAKPLRKLRDNTDFEDEN
>CP034791.1|AZT89281.1|115593_116280_-|7-cyano-7-deazaguanine-synthase-QueC
MRAVVVLSGGMDSTTLLYDVKNQGYETYAISFLYGQKHSKELEFAKKTCELLKVPHKIVDISFFADLAPSALTKSGWSVPEGYYTDESMKQTVVPNRNMVFLSLATSYAISLKAQKLFYGAHAGDHPIYPDCRKEFVEAMKRSILLCDYQIVELEAPYVDLKKEDILKIGLKLGVDYSLTWSCYKGGEKACGRCGTCTERIEAFKKIGVKDPIEYEIEIDWDQKTREN
>CP034791.1|AZT89282.1|116315_116690_-|RidA-family-protein
MKKCIVANDAPKPVGPYSHAVLINNMLFVSGQLAINPQTGKIEGDDIKAQTELVFKNIEAILKEAGFCFDDVVKVNVYISDLADFAKFNEVYSNIFKGNYPARTTVEAKLLPGALVEVDVIAAK
>CP034791.1|AZT89283.1|116731_117130_-|zinc-ribbon-domain-containing-protein
MFFIGIFGIEEKAKVIRQIDVEICPFCTRKGSYTLFKVYNYLHFFFIPVLRWNTRYFIQTSCCSKVYLITNPQLAHDLEHGKDVPITLADVELFRNLQGMYQEGIDSDFCPNCGNRVLKNFLYCPYCGQKLE
>CP034791.1|AZT89284.1|117296_117491_+|MoaD/ThiS-family-protein
MTVVFVGTNKQVTIKGPKSAQQLAKELGISLESHVFIKNGEIVAPDEILQDEDTVEIISAISGG
>CP034791.1|AZT89285.1|117512_118424_+|TIGR00269-family-protein
MKCVRCKQKAKILLKRHNAAFCNECFLYYYRNQVTKNIRKYKMFDKKDKILAVISGGKDSMALWDVLVKEGYNVVAMYINLGIGEYSNRSQKVVESFASKNNLPLIVKDIKKEFGLDIYKLSKTLKRSPCSICGSIKRYLFNKVAYDGGFSAVATGHNLDDEAATLLGNVLSWEEGYLARQAPVLPQTHPKLIKKVKPLYTLTERENLYYVLLNKIEFLHEECPHSVGARSILFKEVLNKLEEESPGTKQRFLNGFLEKGRRHFQDVSEKLELRECKTCGQVTTVEECSFCRFVKICNQQQET
>CP034791.1|AZT89286.1|118493_119147_-|putative-7-carboxy-7-deazaguanine-synthase-QueE
MKKAKFKVVEKFVSIEGEGIRSGFPAIFLRFAGCNLNCSYCDTRYATQNPDYEEITLDQILEYVNSIGFKRVTLTGGEPLIQPHIHDLIDSLIKEGFEVNIETNGSVDIRYVNRNAIITMDYKCPSSGMEDKMLLENIKYLGKSDVLKFVVGTNQDLERAFEIIRLFEPSCNIYFSPVYGKIEPKEIVSFILSHKLQNCRVQLQLHKIIWPDREKGV
>CP034791.1|AZT89287.1|119883_120147_+|hypothetical-protein
MIETTLNAQTVNYLTERELADMIKNQEFKEEFSVQIYNFFTDVPLEDIMRFVIKYKIDENILLQYYESFVKELYPNRELEEMLRDVI
>CP034791.1|AZT89288.1|120136_120766_+|hypothetical-protein
MLSELFNKALLILDCAKIPEEEWTFGGGTALSLYFHHRESKDIDIFLTEAQYLPFLSPRLNEVARGIVDDYTEASNFVKLRFPEGEIDFVVAPYLTKDYCQIMEINGRKVRLETPEEIIVKKLFYRAENLKIRDIVDITIVYRERKTKLKQYFLLIYPKIKIIEHRWDKLKKKYFEDIGKIKIFNKSLIEQVPLLFNQFLEDLRQMSQM

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Crispr_ID: CP034791_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034791_11

2616525-2617019

Unclear

I-A

Consensus_repeat	Method
GTTTACATCCCTCATAGTTCAGATAAAAC	PILER-CR
GTTTACATCCCTCATAGTTCAGATAAAAC	CRISPRCasFinder
GTTTACATCCCTCATAGTTCAGATAAAAC	CRT

7 spacers

cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2

The CRISPR arrays of CP034791_11

>merge|CP034791|11|2616525-2617019|PILER-CR,CRISPRCasFinder,CRT
GTTTACATCCCTTATAGTTCAGATAAAACCTGAACAAAAGAGAGAGTTAGCCACCTGTCCTGTCTGGTTTATATCCCTCATAGTTCAGATAAAACAAAAAGCCTGCAAGCATATGCTTATATCTATGCTTACGTTTACATCCCTCATAGTTCAGATAAAACGACCAAGCGAATGGTTTTACCGGCAGCAAATGAAGCGTTTACATCCCTCATAGTTCAGATAAAACCACTTGATAACATTTTAATGTCATTCAATTTTTATTGATAAGTTTACATCCCTCATAGTTCAGATAAAACACGTTTAGCTATTTCTTTCTGACATTTTAGCATTTAGCGTTTACATCCCTCATAGTTCAGATAAAACGATACAGGTCTAAAATTATTCCGTATAGTTCAGTTGGTTTACATCCCTCATAGTTCAGATAAAACATGGGGGAAATTGAAGTGTATAATTACATTCAAAAATAGTTTACATCCCTCATAGTTCAGATAAAAC

>CP034791|11|9|2616525-2617019|PILER-CR
GTTTACATCCCTTATAGTTCAGATAAAAC	CTGAACAAAAGAGAGAGTTAGCCACCTGTCCTGTCTG
GTTTATATCCCTCATAGTTCAGATAAAAC	AAAAAGCCTGCAAGCATATGCTTATATCTATGCTTAC
GTTTACATCCCTCATAGTTCAGATAAAAC	GACCAAGCGAATGGTTTTACCGGCAGCAAATGAAGC
GTTTACATCCCTCATAGTTCAGATAAAAC	CACTTGATAACATTTTAATGTCATTCAATTTTTATTGATAA
GTTTACATCCCTCATAGTTCAGATAAAAC	ACGTTTAGCTATTTCTTTCTGACATTTTAGCATTTAGC
GTTTACATCCCTCATAGTTCAGATAAAAC	GATACAGGTCTAAAATTATTCCGTATAGTTCAGTTG
GTTTACATCCCTCATAGTTCAGATAAAAC	ATGGGGGAAATTGAAGTGTATAATTACATTCAAAAATA
GTTTACATCCCTCATAGTTCAGATAAAAC

>CP034791|11|10|2616525-2617019|CRISPRCasFinder
GTTTACATCCCTTATAGTTCAGATAAAAC	CTGAACAAAAGAGAGAGTTAGCCACCTGTCCTGTCTG
GTTTATATCCCTCATAGTTCAGATAAAAC	AAAAAGCCTGCAAGCATATGCTTATATCTATGCTTAC
GTTTACATCCCTCATAGTTCAGATAAAAC	GACCAAGCGAATGGTTTTACCGGCAGCAAATGAAGC
GTTTACATCCCTCATAGTTCAGATAAAAC	CACTTGATAACATTTTAATGTCATTCAATTTTTATTGATAA
GTTTACATCCCTCATAGTTCAGATAAAAC	ACGTTTAGCTATTTCTTTCTGACATTTTAGCATTTAGC
GTTTACATCCCTCATAGTTCAGATAAAAC	GATACAGGTCTAAAATTATTCCGTATAGTTCAGTTG
GTTTACATCCCTCATAGTTCAGATAAAAC	ATGGGGGAAATTGAAGTGTATAATTACATTCAAAAATA
GTTTACATCCCTCATAGTTCAGATAAAAC

>CP034791|11|8|2616525-2617019|CRT
GTTTACATCCCTTATAGTTCAGATAAAAC	CTGAACAAAAGAGAGAGTTAGCCACCTGTCCTGTCTG
GTTTATATCCCTCATAGTTCAGATAAAAC	AAAAAGCCTGCAAGCATATGCTTATATCTATGCTTAC
GTTTACATCCCTCATAGTTCAGATAAAAC	GACCAAGCGAATGGTTTTACCGGCAGCAAATGAAGC
GTTTACATCCCTCATAGTTCAGATAAAAC	CACTTGATAACATTTTAATGTCATTCAATTTTTATTGATAA
GTTTACATCCCTCATAGTTCAGATAAAAC	ACGTTTAGCTATTTCTTTCTGACATTTTAGCATTTAGC
GTTTACATCCCTCATAGTTCAGATAAAAC	GATACAGGTCTAAAATTATTCCGTATAGTTCAGTTG
GTTTACATCCCTCATAGTTCAGATAAAAC	ATGGGGGAAATTGAAGTGTATAATTACATTCAAAAATA
GTTTACATCCCTCATAGTTCAGATAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP034791.1\|AZT91378.1\|2606382_2607669_-\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376564
CP034791.1\|AZT91377.1\|2604825_2605533_+\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176506
CP034791.1\|AZT91712.1\|2607776_2607992_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP034791.1\|AZT91387.1\|2626122_2627847_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|366703
CP034791.1\|AZT91713.1\|2612015_2612702_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|187789
CP034791.1\|AZT91385.1\|2617104_2617878_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|366760
CP034791.1\|AZT91392.1\|2634596_2636102_-\|xylan-1,4-beta-xylosidase	unknown	unknown	gnl\|CDD\|366525
CP034791.1\|AZT91382.1\|2612724_2613735_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
CP034791.1\|AZT91391.1\|2632712_2633513_-\|acetylesterase	unknown	unknown	gnl\|CDD\|223700
CP034791.1\|AZT91379.1\|2608246_2609227_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|187853
CP034791.1\|AZT91714.1\|2617874_2619353_-\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950
CP034791.1\|AZT91383.1\|2613727_2615350_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cd09665_cas8b2_CAS-I-B	gnl\|CDD\|187796
CP034791.1\|AZT91381.1\|2609779_2612008_-\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP034791.1\|AZT91715.1\|2633546_2634542_-\|endo-1,4-beta-xylanase	unknown	unknown	gnl\|CDD\|366032
CP034791.1\|AZT91388.1\|2628017_2629469_-\|beta-xylosidase	unknown	unknown	gnl\|CDD\|366525
CP034791.1\|AZT91380.1\|2609232_2609745_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
CP034791.1\|AZT91390.1\|2630914_2632579_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270300
CP034791.1\|AZT91386.1\|2622427_2623372_-\|transposase	unknown	unknown	gnl\|CDD\|376573
CP034791.1\|AZT91389.1\|2629502_2630786_-\|endo-1,4-beta-xylanase	unknown	unknown	gnl\|CDD\|214750
CP034791.1\|AZT91384.1\|2615415_2616201_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl\|CDD\|187783

Protein	Function_ID	Function_description	E-value
CP034791.1\|AZT91378.1\|2606382_2607669_-\|IS110-family-transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	1.35782e-28
CP034791.1\|AZT91377.1\|2604825_2605533_+\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176506	cd08563, GDPD_TtGDE_like, Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.	6.00508e-88
CP034791.1\|AZT91712.1\|2607776_2607992_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.49723e-25
CP034791.1\|AZT91387.1\|2626122_2627847_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	3.89393e-52
CP034791.1\|AZT91713.1\|2612015_2612702_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|187789	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.41182e-31
CP034791.1\|AZT91385.1\|2617104_2617878_-\|AAA-family-ATPase	gnl\|CDD\|366760	pfam01695, IstB_IS21, IstB-like ATP binding protein. This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function.	3.09453e-76
CP034791.1\|AZT91392.1\|2634596_2636102_-\|xylan-1,4-beta-xylosidase	gnl\|CDD\|366525	pfam01229, Glyco_hydro_39, Glycosyl hydrolases family 39.	0
CP034791.1\|AZT91382.1\|2612724_2613735_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	4.3577e-51
CP034791.1\|AZT91391.1\|2632712_2633513_-\|acetylesterase	gnl\|CDD\|223700	COG0627, COG0627, Predicted esterase [General function prediction only].	3.5214e-23
CP034791.1\|AZT91379.1\|2608246_2609227_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	4.75158e-172
CP034791.1\|AZT91714.1\|2617874_2619353_-\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	9.05169e-28
CP034791.1\|AZT91383.1\|2613727_2615350_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl\|CDD\|187796	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	6.55755e-22
CP034791.1\|AZT91381.1\|2609779_2612008_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	8.57955e-70
CP034791.1\|AZT91715.1\|2633546_2634542_-\|endo-1,4-beta-xylanase	gnl\|CDD\|366032	pfam00331, Glyco_hydro_10, Glycosyl hydrolase family 10.	6.35248e-124
CP034791.1\|AZT91388.1\|2628017_2629469_-\|beta-xylosidase	gnl\|CDD\|366525	pfam01229, Glyco_hydro_39, Glycosyl hydrolases family 39.	0
CP034791.1\|AZT91380.1\|2609232_2609745_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	5.55006e-64
CP034791.1\|AZT91390.1\|2630914_2632579_-\|extracellular-solute-binding-protein	gnl\|CDD\|270300	cd13582, PBP2_AlgQ_like_3, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	0
CP034791.1\|AZT91386.1\|2622427_2623372_-\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	1.88365e-12
CP034791.1\|AZT91389.1\|2629502_2630786_-\|endo-1,4-beta-xylanase	gnl\|CDD\|214750	smart00633, Glyco_10, Glycosyl hydrolase family 10.	6.10683e-95
CP034791.1\|AZT91384.1\|2615415_2616201_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	1.06504e-17

>CP034791.1|AZT91384.1|2615415_2616201_-|CRISPR-associated-endoribonuclease-Cas6
MRAKFIFEVHNGFNETKELPVYYRTLFMAFLKKALSSYNEEYFKRLYWWEDKKNKWQKPFVYAVNLPNMNFSDDKVLFRGDIVLNLSTSDYEFFVNIYNSLISSKLYPHKLANNCEIKLKRAYLIKEPEQFSSTMTFKTFSPVLIEKKEGDDKIPVLPYDEGFEEVLNDVIDFEIRNIRILKGQNRGLHKRISFKPINVKKIVVKHKISEFVENTGKEIMYLTGFGGIFELSGHPDDLKEIYQNGLGFRRGQGFGFIEVVK
>CP034791.1|AZT91383.1|2613727_2615350_-|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MIRIHLNDWFYNMCVVGLCRVLEYAKSNINHNITLNYCDDFIEFEEKYLDDIPKAYFEYFYTEFKKINSSSTETEFLEWLKNDLGQNFIGQASFVNRYTETHKVEVKSDSISGCEYYFNKHFVGPLKECLFNIKNSNHKLPIQIDLEKRKKTAKTGPTSKPCVFCGEISSGDTFDEKRFVPLAVSSDGAKNFFWNGHNNLPICKKCVFLFMFAPAGVSEITYVRYKREDKDKFKKEEEKYKVFVNLDASVEELLKINNALKDRVEEALSATDRFEDSIFRLFAIDLIKYLKTKALWSFENILVVEFNALYSERGTKGVKKSKINYLSFPKHVAKFLVSREGKSITKIQNTEFRNNLVNAILKNEGLERLIFSETYRMLYTSFYKEAYSIYLSVRIKCLLKYYKELITGNQMLKGDEKMVTDRLGVLFKSGRKIAEYYIEKEQENKLPALVYRLLNAAKVGDFHTVFDTIIRVYMNTEIQIPHEFIGLVQSQGASDFKDVIDPLSIAQAFVAGILYEMNKEKGSSTKQDKNENIEEEVENG
>CP034791.1|AZT91382.1|2612724_2613735_-|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MVKKGFTASIIFLGNSLNYGEGFSNFSELKKFARGDGNLYTFGSRQSLRYDIVRLGSERFGWELVETKREGQKGTIQFKIEEKDIAEAIKKYEELDLFGYMITKRAQRGKKKKGNEGEETKDEEKGESLTRSAVVRLSNAISLEPYKNDLEFLSNKGMADRLEDKEKNRNANIANIEFHNSFYTYTITIDLSRVGVIEDNKNVKEVVEKEEKFKRVSELLDVIKFLNRNIRGRCENLSPLFIIGGVYDIVHPFFLGRLQVKGLNQKYYIVKEPIESTLNMQIWNNKKVKDDTYIGAMPGVFENLDEIGSLVPSGVISVDEFFNNVKEKIKDYYEVK
>CP034791.1|AZT91713.1|2612015_2612702_-|type-I-B-CRISPR-associated-protein-Cas5
MLKVKIFQETACYKKPFSLKVAETYPLPPYSTVKGLFHKLLATKDFFYRFNISIQGTYEAVMTNYQKMLFFKDNGDITSMPLSVQLLYNVELLIHVYYPDKKILERLAEKLISPDAYLSVGRHEDLALATDIKFVRAEKIDFSEIEEPYFVKCNLYMPEEYLKSVQENNFGLNGIKFRLNYSYKKLNGLRVWEEKAEVKYIEKGSVIEDGIFLVDEEGDLVAFYPVVR
>CP034791.1|AZT91381.1|2609779_2612008_-|CRISPR-associated-helicase-Cas3'
MNDKIVIYAKSQPPETLQEHVDSLIHNFQILKDVYKKEIDSILPDNVRDIFWDMLYSACVLHDCGKLFTPFQNVIRKHLKKEALKTTFENSIPHSYLSPAFVPKRLLQKYSGYERAFMQAIIYHHERDSLCDDVLYELIVRVIKEELEPKIDIINNQLLNPKLKISLTSLNKKYYKYVSSSNRLVWWDKKGGENEVELLVYILLKGLLVRIDHCASAHVDVEDTTKENLFGKTQCYILNTFKKLNELQDLIKDNKGKNLILIASTGSGKTEAALMWSEDAKTFFILPMRAALNMMYSRIAKDVGIKSVGLLHSTSLQYLLFEEDDHQDAFSIYQSSKYLGKQLLLTTMDQVFTFPFRFKGYERILATLAYSKIIIDEIQGYSPVIAATILKGIEMLHKFGTRFLIMTATLPTIYKDYLKEKGINFETIEYHSQIKRHRIKIKEKDIQADISKIIELAKEKNVLVITNTIAKAVEVYKQIKKAVGEEIKVELLHSQFIQKHRREKEERIKSIQPKSTSGIWITTQIIEASIDVDFDFLFTELSTLDSLFQRMGRCYRKREYDQEEPNVYIYTGNVSGIGKVYDKDIHSISLEMLKNFDKKIISENEKAKLVEELYSYERIKDTKYYNKFREMLNLIESIFDGEFEKQEVHESLRNIFNVRAIPQMYREEAKKLFEQYSAAENVAEKAKIFDRFSEYIVEVPYWRVEKFIEKPRNFFNDIYILNLGYDSNTGINYEEVILSEMI
>CP034791.1|AZT91380.1|2609232_2609745_-|CRISPR-associated-protein-Cas4
MSEQMELQDLKFQGIKINYLYVCKRKLWLFSKNITFENQSDKVLLGKVLHEYSYPKEDAKEVLIDNLIMIDILSDGAVREVKYSSRMKEADIMQVMYYLYYLKQKGIEKQGIINYPKERRKEILELTPEYEQKVKQALSEIEKITSQVTPPPATKQKICKSCAYFEFCWG
>CP034791.1|AZT91379.1|2608246_2609227_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MQKTLYITSNGRLRRKDNTLYFETETEKRSIDIENIEQIHIFGEVDLNTKALNYISQYGIILHFYNYYGFYAGSFMPRKKNVSGDVVVRQALHYLDREKRIFLAYCFVESAVYHMMRNLRERKEAEAFLNAIEDEWENGRFNISSISELMGLEGRVRNIYYSSFNQFLPEDFYMEKREKRPPTNPINALISFGNSLIYSTVLTEIYHTQLDPSISFLHEPSEKRFSLSLDISEIFKPLVVDSVIFKLLNNRQITLEHFDEDLNYCYLNQEGRRIFINELRNKLETTVRHRQLNRNVSYKGYIRLECYKLIKHFIGDQVYSPLKAWW
>CP034791.1|AZT91712.1|2607776_2607992_-|CRISPR-associated-endonuclease-Cas2
MFVIVTYDVNEKRVNKVRKILKKYLTWVQNSVFEGEITYGKLEKCKRELFSVIEKDEDSVYFYEHSCNERK
>CP034791.1|AZT91378.1|2606382_2607669_-|IS110-family-transposase
MKYTQNEKILQVTERTLVVGVDIAKERHVGRAFDFRGVELGKRIEFENRKEGMEKFLDWANKIMKANGKDNMIVGIEPTGHYWLCFEQYLRENGIKVVLVNPFHVKRSKELDDSTQTKSDIKDPKTIAMLVKDGRYTEPNIPEGIYAEMRVAMNIYERLQKQLNVLKNQIINWLDMYFPEFLEVFSDWEGKTAIETLKEVPLPCDVVENEVEGIIEYWRDKVDRRAISRRRAMDLVETAKRSIGKKEGRKLARQEIKYLLSQYELLKKQIEEIEAEMAELLREVPNGEELLKIKGVGVKTAVGFISEVGDIKRYEDARQIQKLAGLNIVENSSGKYKGQTCISKRGRGRLRSSLFKAMITIVAKNEEFKQLHRYYTTRENNPLKKKQSLIALCCKLIRVFYAILKKGVKYDGNKMLSDIKREALARTA
>CP034791.1|AZT91377.1|2604825_2605533_+|glycerophosphodiester-phosphodiesterase
MEIFAHRGASAYYPENTMLSFEKAIEMGCTGIETDVQMTKDGVLVLIHDERVDRTTGETGYVKEFTFNEIRKLNAGYYKHFKFCQIPTAEELLELGKEKGIHINFELKTYHPVANHIEDKLIQLIYKYEMQNNVIISSFFQEPLLRCRQLDSTIRLALLTTKAVKISCLSSLGIHIVHPIYYLTSFIVQLKQNHFNVNVFTVNKKRQMKKFIKLNVDGLITDMPDVASQLALSQI
>CP034791.1|AZT91385.1|2617104_2617878_-|AAA-family-ATPase
MNDLLLGKLKDLKLSGIIKSFDLRVEEAIKNNFSYQEFFEILINDEVSNRRINSNQKRISKARFPWHKTLEEYNFNYQPSINKRFIYNLATCEFVRKKENVAFIGPPGTGKTHLAIAIGLKAVALGYRVLFTTANEMLEELYISRADNSYQQKLKNYVNVDLLIIDELGLRKFNQSSVDDFYEIISKRYERGSIIITTNKVFEEWPRIFYDPVLATAILDRFVHHCHFVVIKGESYRMKQREGAIKALTDDSKNESN
>CP034791.1|AZT91714.1|2617874_2619353_-|IS21-family-transposase
MHTTIYTLFKRGYNKSQIARLLDVDRKTVRKVIHDIEQKGEVERKSKGSVLDNYREFIEAKVNKGHSAKKIHQDLQAEFDFEGSYSNVRRYVQKLKQKIANSKVYMVLTTLPAEEAQVDFGYIGKIKVDGKFKKAWVFTMVLSYSRYMYAEIVFDQTVETFIQCHKNAFKYFGGVVEVVKIDNLKAGVLSVDFYEAQIQKDYASFASHYGFLPQPCRVYTPTDKGKVESAIKYVKQNCFSGEEFKDIDEAREHLKNWLDNVANVRVHGTTKKVPKEVFISEEKEKLIALPIEEYYISRSSIHKVATNCHLIYKGNYYSVPYEYAGREVEVVEIGSFLRVFFEGKEIALHQIVKNNEKGKYVTNKEHYPSSKNITIEDIMSRQRDKMAEIGNWALEFFEEFIKREGFKKYDYRSISGIIALKERYGAETVDNACKRALKFGGLSYKVVKNICEKGISDLPEYEDESYVNEERTELYRDIREYNKLLEIGELQI
>CP034791.1|AZT91386.1|2622427_2623372_-|transposase
MTKNIKAQNKKFLKLLFVIKKVTEVLSRKIKQNRRGRPRKFNLFQIIACLVYKVKKGIKSFRELEYRINQDTEFKQVVGIEESPDYSYFAKLSRKIEKEYMQDIKDILIAKIEPDMSIAIVDSTPLRSAKNDSEAKIGIHITIGFFRGYKLHLLCTGKEEVIPLFWILTGANEHDSRQEELLYRAWGFGCEIVLADAGYDCSRWFNIANELKVKFVAGINKRNMKDKNNVKNVFRSKNIRFLETEEGKKLYKQRTKIERLFSKLKGEYNLENVRLKGFRNYKRYIDWILITFLFEQLLRKLEGKKFSFAYEWNQ
>CP034791.1|AZT91387.1|2626122_2627847_-|LysM-peptidoglycan-binding-domain-containing-protein
MAKHTPKGKSAATAAVPDKEKARFVPKNIQAEIKEKIKDTGEKVAKAEGKDKALLQLKLESNKKVDKKKFKKDRSAERNKTSSNRFLSLDKIKSLYSKEIHNKLSHIFEDAVSEVYRILMGLKYIKKAPNYTEIVLKAKIFSTLILMIVILFLINKMPSTYKKAYAVVLNNQIVGYVKDKTEAQNLLAQIKKEVEERHNTDSFILQSKLQLRSIEPGQYRETRVDELKNTIIEKGKVLVKRYAIFVNSKPYFVFENPQTPNNILNKLKKVYYNDKASQAKFLEKVEIKPVYVSPAIKVADENTALTKIMFGKDQVIEYTVKEGDTLWDLSRKYNLAVDDIFASNPGLSEKIMPGQKIKLTKAAPLINVMLEKEVEYEDVLPKEVKVIKSENYYTTQTIVKQEGKDGRAKIRAKIVYMNGLEYDRQIISQQLIQKPVERIVVVGTKKPPAYVATGRFSFPAWGTLTSRFGYRGREFHEGIDLAMPWGSNVYAADGGVVEFTGWSGGYGKLVIINHKNGYQTYYGHLSRILVSPGQKVAKGQLIAKSGSTGRSTGPHLHFEVRKNGVPQNPLRYLR
>CP034791.1|AZT91388.1|2628017_2629469_-|beta-xylosidase
MKITINYGKKLEKINKFWTKCVGSCHATTALREDWRKQLKKCRDELGFEYVRFHGWLNDDMSVCFRNDDGLLSFSFFNIDSIIGFLLEIGMKPFIELSFMPEALASGTKTVFHYKGNITPPKSYEEWGQLIEELARHLISRYGKNEVREWFFEVWNEPNLKDFFWAGTMEEYFKLYKYAAFAIKKVDSELKVGGPATAIDAWIPELKDFCTKNSVPIDFISTHQYPTDLAFSTSSNMEEAMAKAKRGELAERVKKALEEAYPLPVYYTEWNNSPSPRDPYHDIPYDAAFIVKTIIDIIDLPLGCYSYWTFTDIFEECGQSSLPFHGGFGLLNIHGIPKPSYRAFQILDKLSGERIEIEFEDKSPTIDCIAVQNEREIVLVISNHNVPLSPINTENIKVVLKGIKDCHEVFVERIDEYNANPKRVWLEMGSPTYLNREQIEELIKASELKKEKVSWGIVNNNNEVTFDLSVLPHSVVAVTIKNG
>CP034791.1|AZT91389.1|2629502_2630786_-|endo-1,4-beta-xylanase
MKRKWTNILSIAVLSIAMVFFFTSCTIQSAVEQKKTVEEILGKIGESEDKTNSRGQPATMKENEVEDYALKDVYKDYFLVGAAINGYSVETAAINHSGMAAILKKHFNSTTLSNLMKPQYLLDYEATKASKDGMPVCKFDSCIPALQFYKEYGIEMRGHVLVWHNQTPEWFFLKDYDVSKPLVDAATMERRLESYIKQVIEFCQKNYPSVVYCWDVVNEAILDDGSWRETNNNWYTIMKEKYVEKAFYYARKYAKKDVALFYNDYNVFLPAKREAIYNLAQKLKEKGLIDGLGLQPTVGLNYPELDSDDIDSFKTTLKTFAKLGLQIHITELNFEIKGDESNRTPENLKKQADRYYEMMKLLLKEDTDNGGPCNITCVTVFGICDDYPLYKNFKQCMYLWDKNCNPKPCFYSFLQAGLDWKASLLSK
>CP034791.1|AZT91390.1|2630914_2632579_-|extracellular-solute-binding-protein
MRKKRLFAVVIVMTFLISSVIGINLINSKDVQARSVSKTVKVFTFYNGNTNDEPHPNLFDTPIGKEITKLTGVKLKIEYATGQDEATKIGLILASGDLPDLIYGGNEHGKLIEAKVLVPIENYIQKYGKYCKQIYSGKDLKRMKQQDGHIYFLTPHRNEISPDIKPDGFWLPIDLLEKAKWPKVRYWEDYLKLIRDYVKKNPKIEGYPTIGFTFITESWRFFTLENPPSYLMGYQNDGDVIVDPKTFEAKVYSTMEASKRYYRDLNKLWQEGLIDKEVFVQNYDTYLSKIAQGRVVGFYDQYWQFGYDAEESLKNAKKYNRLHISFPVVYRGVQRAKYVMRSPIGSRDGISITKKCKDPVGAFKFLDTLCSMEAQKLMYWGIKGVDYSVDKNGKMYLTDQQKKNREDPQYRRKRGLGYWWTFPHAYLKLQDGNYREPGFDPDYVYKNFTSAEKKVLDAYKAKTFMQLPFTDPPLETPYGFAWEINIPAERKDVTIAQQKMSEVRRKYLPRLVMAKPGEYDKIWNEFVKEFEKTNYKVYEKFKTEIIKWKVKNWN
>CP034791.1|AZT91391.1|2632712_2633513_-|acetylesterase
MAIMQINFYSKMLKKNTTILAILPVDKPDKKFQKDVDSENLKTLYLLHGYAGNYMDWLCGARIVELSMRYNVAVFLPSGENSFYLDDEEKEEYFGEFVGNEIIEFTRNVFPIPQKREKTFIGGLSMGGYGALRNGLKYNKNFAGIIALSSALIIHKIAGIPKDYRNAYASYNYYRRVFGDLNSLIGSDKDINALVTKLKQEKGSIPKIYMACGKDDFLVQENRDLFNFLKNEGIDVIYEEDEGGHDWDFWNKHIKKAFEWLNKLSN
>CP034791.1|AZT91715.1|2633546_2634542_-|endo-1,4-beta-xylanase
MLNLSLAKTYKDYFKIGAAVTAKDLEGVHREILLKHFNSLTPENAMKFENIHPEEQRYNFEEVDRIRNFAIENNMKMRGHTFVWHNQTPGWVFLDKNGEEASKELVIERLREHIKTLCERYKDVVYAWDVVNEAVEDKTEKLLRESNWRKIIGDDYIKIAFEIAREYAGDAKLFYNDYNNEMPYKLEKTYKVLKELLERGTPIDGIGIQAHWNIWDKNLVSNLKKAIEVYASLGLEIHITELDISVFEFEDRRTDLFEPTPEMLELQAKVYEDVFAVFREYKDVITSVTLWGISDRHTWKDNFPVKGRKDWPLLFDVNGKPKEALYRILRF
>CP034791.1|AZT91392.1|2634596_2636102_-|xylan-1,4-beta-xylosidase
MTNIKIEKGKQIGIFPDKWKFCVGSGRIGLALQKEYIDALSYVKKHIDFKYIRAHGLLHDDVGIYREDIIDGNEVPFYNFTYIDRIYDSFLELGIRPFVEIGFMPSKLASGTQTVFYWRGNVTPPKDYGKWEKLIKSVVKHFIDRYGEKEVIQWPFEIWNEPNLNVFWKDANQAEYFKLYEVTAKAIKEVNENIKVGGPAICGGSDYWIDDFLHFCYKNKVPVDFLTRHAYTGKPPQYTPHFVYQDVHPIEYMLSEFKNVREKVRNSPFPDLPIHITEFNSSYHPLCPIHDTPFNAAYLARVLSEAGDYVDSFSYWTFSDVFEEADVPRAIFHGGFGLVAFNNIPKPVFHMFTFFNAMGNKILYRDEHILITERENGTIAIVAWNEVMKKEEATDKKYKIEIPVDYNDVFIKQKLIDEENGNPWRTWIQMGRPRYPTKEQIETLREVAKPKISTFRMMAENGYITLEFTLSKNAVVLFEISKVVDESDTYIGLDDSKIPGY

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Crispr_ID: CP034791_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034791_12

2619537-2622083

Unclear

I-A

Consensus_repeat	Method
GTTTACATCCCTCATAGTTCAGATAAAAC	PILER-CR
GTTTACATCCCTCATAGTTCAGATAAAAC	CRISPRCasFinder
GTTTACATCCCTCATAGTTCAGATAAAAC	CRT

38 spacers

cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2

The CRISPR arrays of CP034791_12

>merge|CP034791|12|2619537-2622083|PILER-CR,CRISPRCasFinder,CRT
GTTTACATCCCTCATAGTTCAGATAAAACAGGGATTAAAAACCGAGTAGTTCAGTAGGAATTAATTCGTTTACATCCCTCATAGTTCAGATAAAACTTGCTATGTGATGTAACTCCTAAACCTTCTCTTGCAGTGTTTACATCCCTCATAGTTCAGATAAAACACGACGGACGATAGACCAGGCTTTTCTTGAAATGATTAGTTTACATCCCTCATAGTTCAGATAAAACGCAGCAAAAAGCAAAGCTTGAACAACCATTTGCTTTGTTTACATCCCTCATAGTTCAGATAAAACGTGTTAGAAAAAATTCGAGAGGCAAACGCAAGGTTACGTTTACATCCCTCATAGTTCAGATAAAACAGTCGCAGCTCATTTATGAACGAATACATACCAAACACGTTTACATCCCTCATAGTTCAGATAAAACATGTTCGTGTATATGCCTTGTGCAAGCATATCCATCGTTTACATCCCTCATAGTTCAGATAAAACAAAGCTTTGGGGAGGGAATAGAAATGAGAACAATGAGTTTACATCCCTCATAGTTCAGATAAAACCTTGACTTTGGCTATGCTGTTGACCCTGCAGCCTATGGTTTACATCCCTCATAGTTCAGATAAAACTATCAAAGCCGCTTCGTTTGTTACAGACACAATTAAAGTTTACATCCCTCATAGTTCAGATAAAACACCGCAAAATCCCTCCCAGTTGCCATATCGCAAAGCTTGTTTACATCCCTCATAGTTCAGATAAAACAAGTATGGCGACGTTTAGACAGATTTATATTTCGTATGTTTACATCCCTCATAGTTCAGATAAAACCTAATAAAAGCTTTTTAAATGAGGTGTAATAGAGAAGTTTACATCCCTCATAGTTCAGATAAAACATCGTATCAGCTATTATAAGAAACACAAAACAGCAAGTTTACATCCCTCATAGTTCAGATAAAACTTCGGGGCTGCGGCGCAAGGTTGCAGCGTTCCCAGCGTTTACATCCCTCATAGTTCAGATAAAACTGAGGATGAGCGGAATTCAATTCCGGTCACCGATTCTTGTTTACATCCCTCATAGTTCAGATAAAACCAGCGCACAGCAACCCAGCTGGCGTGGGCGGGGCGGCGTTTACATCCCTCATAGTTCAGATAAAACGCGATAGTATGTAGCAGTTTCAATTTCAAGTTCATCGTTTACATCCCTCATAGTTCAGATAAAACAAGAAACTGGGTTAAGGCGTTTTAAAGAAACACTTTTTTGTTTACATCCCTCATAGTTCAGATAAAACTATCACTACTAAAATTTCGCTTTTTAAAGTTTTGAAAGGGTTTACATCCCTCATAGTTCAGATAAAACCAGCCAAATTTATCGCAAATGCAGATTTGCCCATCGCGTTTACATCCCTCATAGTTCAGATAAAACAAAACAATTTAAAACAGGTTGCAAAACTATTCTATCGTTTACATCCCTCATAGTTCAGATAAAACCTATTTAGTTCTGCCACGTTGCTTATCTTAGCCAAAGTGTTTACATCCCTCATAGTTCAGATAAAACAGACTCATTAACACGTTTAGCAATAATTTATGAAAAACAGTTTACATCCCTCATAGTTCAGATAAAACACAGCTTTTGGAGAAAAACCCAAAGTTACAGATATTCGTTTACATCCCTCATAGTTCAGATAAAACTTAAAAAGTAGATAAGCCCCTACAACACCTAAAACAACGTTTACATCCCTCATAGTTCAGATAAAACAAGGAGGGATTAGTGATGATATTTGTTATAACTAAAGAGTTTACATCCCTCATAGTTCAGATAAAACGCAACAGCAAATTAACGAGCTGTTAACAAAAGATTAGTTTACATCCCTCATAGTTCAGATAAAACTAGCTCGTTTTTTTAACGTAACAGTTGACTATTTAATGTTTACATCCCTCATAGTTCAGATAAAACTTCCTCAAATTCTCAAGCAATCTTGCAGACCAAATCTGGTTTACATCCCTCATAGTTCAGATAAAACAGCAGGCAAATTCAAGATGGCAGAAGAAGTAAGGAAGTCGTTTACATCCCTCATAGTTCAGATAAAACTAGCTAAACAATGCTAATATTGTTAAACCACCAGCGTAGTTTACATCCCTCATAGTTCAGATAAAACGAGTAAATGCACAGGACATGTTGCAATTAACGTCTGCGTTTACATCCCTCATAGTTCAGATAAAACAAAAAATCAATAGTCCACAAATTGTGAACAAATTGTTAGTTTACATCCCTCATAGTTCAGATAAAACAACTGTAGATAGAAAATTTTTAACCAAGCAAGCGTTGTTTACATCCCTCATAGTTCAGATAAAACGCAGATAGTCGCTGATGTAGGGAAAAAGATTGATATAGTTTACATCCCTCATAGTTCAGATAAAACTTTCATCCCAAATTTGAGAGTTGTATCTGTTTTTCTTGTTTACATCCCTCATAGTTCAGATAAAACTTTAAAAAATTTGATGAAGCTTTGCAAAGACTTAAAAGTTTACATCCCTCATAGTTCAGATAAAAC

>CP034791|12|10|2619537-2622083|PILER-CR
GTTTACATCCCTCATAGTTCAGATAAAAC	AGGGATTAAAAACCGAGTAGTTCAGTAGGAATTAATTC
GTTTACATCCCTCATAGTTCAGATAAAAC	TTGCTATGTGATGTAACTCCTAAACCTTCTCTTGCAGT
GTTTACATCCCTCATAGTTCAGATAAAAC	ACGACGGACGATAGACCAGGCTTTTCTTGAAATGATTA
GTTTACATCCCTCATAGTTCAGATAAAAC	GCAGCAAAAAGCAAAGCTTGAACAACCATTTGCTTT
GTTTACATCCCTCATAGTTCAGATAAAAC	GTGTTAGAAAAAATTCGAGAGGCAAACGCAAGGTTAC
GTTTACATCCCTCATAGTTCAGATAAAAC	AGTCGCAGCTCATTTATGAACGAATACATACCAAACAC
GTTTACATCCCTCATAGTTCAGATAAAAC	ATGTTCGTGTATATGCCTTGTGCAAGCATATCCATC
GTTTACATCCCTCATAGTTCAGATAAAAC	AAAGCTTTGGGGAGGGAATAGAAATGAGAACAATGA
GTTTACATCCCTCATAGTTCAGATAAAAC	CTTGACTTTGGCTATGCTGTTGACCCTGCAGCCTATG
GTTTACATCCCTCATAGTTCAGATAAAAC	TATCAAAGCCGCTTCGTTTGTTACAGACACAATTAAA
GTTTACATCCCTCATAGTTCAGATAAAAC	ACCGCAAAATCCCTCCCAGTTGCCATATCGCAAAGCTT
GTTTACATCCCTCATAGTTCAGATAAAAC	AAGTATGGCGACGTTTAGACAGATTTATATTTCGTAT
GTTTACATCCCTCATAGTTCAGATAAAAC	CTAATAAAAGCTTTTTAAATGAGGTGTAATAGAGAA
GTTTACATCCCTCATAGTTCAGATAAAAC	ATCGTATCAGCTATTATAAGAAACACAAAACAGCAA
GTTTACATCCCTCATAGTTCAGATAAAAC	TTCGGGGCTGCGGCGCAAGGTTGCAGCGTTCCCAGC
GTTTACATCCCTCATAGTTCAGATAAAAC	TGAGGATGAGCGGAATTCAATTCCGGTCACCGATTCTT
GTTTACATCCCTCATAGTTCAGATAAAAC	CAGCGCACAGCAACCCAGCTGGCGTGGGCGGGGCGGC
GTTTACATCCCTCATAGTTCAGATAAAAC	GCGATAGTATGTAGCAGTTTCAATTTCAAGTTCATC
GTTTACATCCCTCATAGTTCAGATAAAAC	AAGAAACTGGGTTAAGGCGTTTTAAAGAAACACTTTTTT
GTTTACATCCCTCATAGTTCAGATAAAAC	TATCACTACTAAAATTTCGCTTTTTAAAGTTTTGAAAGG
GTTTACATCCCTCATAGTTCAGATAAAAC	CAGCCAAATTTATCGCAAATGCAGATTTGCCCATCGC
GTTTACATCCCTCATAGTTCAGATAAAAC	AAAACAATTTAAAACAGGTTGCAAAACTATTCTATC
GTTTACATCCCTCATAGTTCAGATAAAAC	CTATTTAGTTCTGCCACGTTGCTTATCTTAGCCAAAGT
GTTTACATCCCTCATAGTTCAGATAAAAC	AGACTCATTAACACGTTTAGCAATAATTTATGAAAAACA
GTTTACATCCCTCATAGTTCAGATAAAAC	ACAGCTTTTGGAGAAAAACCCAAAGTTACAGATATTC
GTTTACATCCCTCATAGTTCAGATAAAAC	TTAAAAAGTAGATAAGCCCCTACAACACCTAAAACAAC
GTTTACATCCCTCATAGTTCAGATAAAAC	AAGGAGGGATTAGTGATGATATTTGTTATAACTAAAGA
GTTTACATCCCTCATAGTTCAGATAAAAC	GCAACAGCAAATTAACGAGCTGTTAACAAAAGATTA
GTTTACATCCCTCATAGTTCAGATAAAAC	TAGCTCGTTTTTTTAACGTAACAGTTGACTATTTAAT
GTTTACATCCCTCATAGTTCAGATAAAAC	TTCCTCAAATTCTCAAGCAATCTTGCAGACCAAATCTG
GTTTACATCCCTCATAGTTCAGATAAAAC	AGCAGGCAAATTCAAGATGGCAGAAGAAGTAAGGAAGTC
GTTTACATCCCTCATAGTTCAGATAAAAC	TAGCTAAACAATGCTAATATTGTTAAACCACCAGCGTA
GTTTACATCCCTCATAGTTCAGATAAAAC	GAGTAAATGCACAGGACATGTTGCAATTAACGTCTGC
GTTTACATCCCTCATAGTTCAGATAAAAC	AAAAAATCAATAGTCCACAAATTGTGAACAAATTGTTA
GTTTACATCCCTCATAGTTCAGATAAAAC	AACTGTAGATAGAAAATTTTTAACCAAGCAAGCGTT
GTTTACATCCCTCATAGTTCAGATAAAAC	GCAGATAGTCGCTGATGTAGGGAAAAAGATTGATATA
GTTTACATCCCTCATAGTTCAGATAAAAC	TTTCATCCCAAATTTGAGAGTTGTATCTGTTTTTCTT
GTTTACATCCCTCATAGTTCAGATAAAAC	TTTAAAAAATTTGATGAAGCTTTGCAAAGACTTAAAA
GTTTACATCCCTCATAGTTCAGATAAAAC

>CP034791|12|11|2619537-2622083|CRISPRCasFinder
GTTTACATCCCTCATAGTTCAGATAAAAC	AGGGATTAAAAACCGAGTAGTTCAGTAGGAATTAATTC
GTTTACATCCCTCATAGTTCAGATAAAAC	TTGCTATGTGATGTAACTCCTAAACCTTCTCTTGCAGT
GTTTACATCCCTCATAGTTCAGATAAAAC	ACGACGGACGATAGACCAGGCTTTTCTTGAAATGATTA
GTTTACATCCCTCATAGTTCAGATAAAAC	GCAGCAAAAAGCAAAGCTTGAACAACCATTTGCTTT
GTTTACATCCCTCATAGTTCAGATAAAAC	GTGTTAGAAAAAATTCGAGAGGCAAACGCAAGGTTAC
GTTTACATCCCTCATAGTTCAGATAAAAC	AGTCGCAGCTCATTTATGAACGAATACATACCAAACAC
GTTTACATCCCTCATAGTTCAGATAAAAC	ATGTTCGTGTATATGCCTTGTGCAAGCATATCCATC
GTTTACATCCCTCATAGTTCAGATAAAAC	AAAGCTTTGGGGAGGGAATAGAAATGAGAACAATGA
GTTTACATCCCTCATAGTTCAGATAAAAC	CTTGACTTTGGCTATGCTGTTGACCCTGCAGCCTATG
GTTTACATCCCTCATAGTTCAGATAAAAC	TATCAAAGCCGCTTCGTTTGTTACAGACACAATTAAA
GTTTACATCCCTCATAGTTCAGATAAAAC	ACCGCAAAATCCCTCCCAGTTGCCATATCGCAAAGCTT
GTTTACATCCCTCATAGTTCAGATAAAAC	AAGTATGGCGACGTTTAGACAGATTTATATTTCGTAT
GTTTACATCCCTCATAGTTCAGATAAAAC	CTAATAAAAGCTTTTTAAATGAGGTGTAATAGAGAA
GTTTACATCCCTCATAGTTCAGATAAAAC	ATCGTATCAGCTATTATAAGAAACACAAAACAGCAA
GTTTACATCCCTCATAGTTCAGATAAAAC	TTCGGGGCTGCGGCGCAAGGTTGCAGCGTTCCCAGC
GTTTACATCCCTCATAGTTCAGATAAAAC	TGAGGATGAGCGGAATTCAATTCCGGTCACCGATTCTT
GTTTACATCCCTCATAGTTCAGATAAAAC	CAGCGCACAGCAACCCAGCTGGCGTGGGCGGGGCGGC
GTTTACATCCCTCATAGTTCAGATAAAAC	GCGATAGTATGTAGCAGTTTCAATTTCAAGTTCATC
GTTTACATCCCTCATAGTTCAGATAAAAC	AAGAAACTGGGTTAAGGCGTTTTAAAGAAACACTTTTTT
GTTTACATCCCTCATAGTTCAGATAAAAC	TATCACTACTAAAATTTCGCTTTTTAAAGTTTTGAAAGG
GTTTACATCCCTCATAGTTCAGATAAAAC	CAGCCAAATTTATCGCAAATGCAGATTTGCCCATCGC
GTTTACATCCCTCATAGTTCAGATAAAAC	AAAACAATTTAAAACAGGTTGCAAAACTATTCTATC
GTTTACATCCCTCATAGTTCAGATAAAAC	CTATTTAGTTCTGCCACGTTGCTTATCTTAGCCAAAGT
GTTTACATCCCTCATAGTTCAGATAAAAC	AGACTCATTAACACGTTTAGCAATAATTTATGAAAAACA
GTTTACATCCCTCATAGTTCAGATAAAAC	ACAGCTTTTGGAGAAAAACCCAAAGTTACAGATATTC
GTTTACATCCCTCATAGTTCAGATAAAAC	TTAAAAAGTAGATAAGCCCCTACAACACCTAAAACAAC
GTTTACATCCCTCATAGTTCAGATAAAAC	AAGGAGGGATTAGTGATGATATTTGTTATAACTAAAGA
GTTTACATCCCTCATAGTTCAGATAAAAC	GCAACAGCAAATTAACGAGCTGTTAACAAAAGATTA
GTTTACATCCCTCATAGTTCAGATAAAAC	TAGCTCGTTTTTTTAACGTAACAGTTGACTATTTAAT
GTTTACATCCCTCATAGTTCAGATAAAAC	TTCCTCAAATTCTCAAGCAATCTTGCAGACCAAATCTG
GTTTACATCCCTCATAGTTCAGATAAAAC	AGCAGGCAAATTCAAGATGGCAGAAGAAGTAAGGAAGTC
GTTTACATCCCTCATAGTTCAGATAAAAC	TAGCTAAACAATGCTAATATTGTTAAACCACCAGCGTA
GTTTACATCCCTCATAGTTCAGATAAAAC	GAGTAAATGCACAGGACATGTTGCAATTAACGTCTGC
GTTTACATCCCTCATAGTTCAGATAAAAC	AAAAAATCAATAGTCCACAAATTGTGAACAAATTGTTA
GTTTACATCCCTCATAGTTCAGATAAAAC	AACTGTAGATAGAAAATTTTTAACCAAGCAAGCGTT
GTTTACATCCCTCATAGTTCAGATAAAAC	GCAGATAGTCGCTGATGTAGGGAAAAAGATTGATATA
GTTTACATCCCTCATAGTTCAGATAAAAC	TTTCATCCCAAATTTGAGAGTTGTATCTGTTTTTCTT
GTTTACATCCCTCATAGTTCAGATAAAAC	TTTAAAAAATTTGATGAAGCTTTGCAAAGACTTAAAA
GTTTACATCCCTCATAGTTCAGATAAAAC

>CP034791|12|9|2619537-2622083|CRT
GTTTACATCCCTCATAGTTCAGATAAAAC	AGGGATTAAAAACCGAGTAGTTCAGTAGGAATTAATTC
GTTTACATCCCTCATAGTTCAGATAAAAC	TTGCTATGTGATGTAACTCCTAAACCTTCTCTTGCAGT
GTTTACATCCCTCATAGTTCAGATAAAAC	ACGACGGACGATAGACCAGGCTTTTCTTGAAATGATTA
GTTTACATCCCTCATAGTTCAGATAAAAC	GCAGCAAAAAGCAAAGCTTGAACAACCATTTGCTTT
GTTTACATCCCTCATAGTTCAGATAAAAC	GTGTTAGAAAAAATTCGAGAGGCAAACGCAAGGTTAC
GTTTACATCCCTCATAGTTCAGATAAAAC	AGTCGCAGCTCATTTATGAACGAATACATACCAAACAC
GTTTACATCCCTCATAGTTCAGATAAAAC	ATGTTCGTGTATATGCCTTGTGCAAGCATATCCATC
GTTTACATCCCTCATAGTTCAGATAAAAC	AAAGCTTTGGGGAGGGAATAGAAATGAGAACAATGA
GTTTACATCCCTCATAGTTCAGATAAAAC	CTTGACTTTGGCTATGCTGTTGACCCTGCAGCCTATG
GTTTACATCCCTCATAGTTCAGATAAAAC	TATCAAAGCCGCTTCGTTTGTTACAGACACAATTAAA
GTTTACATCCCTCATAGTTCAGATAAAAC	ACCGCAAAATCCCTCCCAGTTGCCATATCGCAAAGCTT
GTTTACATCCCTCATAGTTCAGATAAAAC	AAGTATGGCGACGTTTAGACAGATTTATATTTCGTAT
GTTTACATCCCTCATAGTTCAGATAAAAC	CTAATAAAAGCTTTTTAAATGAGGTGTAATAGAGAA
GTTTACATCCCTCATAGTTCAGATAAAAC	ATCGTATCAGCTATTATAAGAAACACAAAACAGCAA
GTTTACATCCCTCATAGTTCAGATAAAAC	TTCGGGGCTGCGGCGCAAGGTTGCAGCGTTCCCAGC
GTTTACATCCCTCATAGTTCAGATAAAAC	TGAGGATGAGCGGAATTCAATTCCGGTCACCGATTCTT
GTTTACATCCCTCATAGTTCAGATAAAAC	CAGCGCACAGCAACCCAGCTGGCGTGGGCGGGGCGGC
GTTTACATCCCTCATAGTTCAGATAAAAC	GCGATAGTATGTAGCAGTTTCAATTTCAAGTTCATC
GTTTACATCCCTCATAGTTCAGATAAAAC	AAGAAACTGGGTTAAGGCGTTTTAAAGAAACACTTTTTT
GTTTACATCCCTCATAGTTCAGATAAAAC	TATCACTACTAAAATTTCGCTTTTTAAAGTTTTGAAAGG
GTTTACATCCCTCATAGTTCAGATAAAAC	CAGCCAAATTTATCGCAAATGCAGATTTGCCCATCGC
GTTTACATCCCTCATAGTTCAGATAAAAC	AAAACAATTTAAAACAGGTTGCAAAACTATTCTATC
GTTTACATCCCTCATAGTTCAGATAAAAC	CTATTTAGTTCTGCCACGTTGCTTATCTTAGCCAAAGT
GTTTACATCCCTCATAGTTCAGATAAAAC	AGACTCATTAACACGTTTAGCAATAATTTATGAAAAACA
GTTTACATCCCTCATAGTTCAGATAAAAC	ACAGCTTTTGGAGAAAAACCCAAAGTTACAGATATTC
GTTTACATCCCTCATAGTTCAGATAAAAC	TTAAAAAGTAGATAAGCCCCTACAACACCTAAAACAAC
GTTTACATCCCTCATAGTTCAGATAAAAC	AAGGAGGGATTAGTGATGATATTTGTTATAACTAAAGA
GTTTACATCCCTCATAGTTCAGATAAAAC	GCAACAGCAAATTAACGAGCTGTTAACAAAAGATTA
GTTTACATCCCTCATAGTTCAGATAAAAC	TAGCTCGTTTTTTTAACGTAACAGTTGACTATTTAAT
GTTTACATCCCTCATAGTTCAGATAAAAC	TTCCTCAAATTCTCAAGCAATCTTGCAGACCAAATCTG
GTTTACATCCCTCATAGTTCAGATAAAAC	AGCAGGCAAATTCAAGATGGCAGAAGAAGTAAGGAAGTC
GTTTACATCCCTCATAGTTCAGATAAAAC	TAGCTAAACAATGCTAATATTGTTAAACCACCAGCGTA
GTTTACATCCCTCATAGTTCAGATAAAAC	GAGTAAATGCACAGGACATGTTGCAATTAACGTCTGC
GTTTACATCCCTCATAGTTCAGATAAAAC	AAAAAATCAATAGTCCACAAATTGTGAACAAATTGTTA
GTTTACATCCCTCATAGTTCAGATAAAAC	AACTGTAGATAGAAAATTTTTAACCAAGCAAGCGTT
GTTTACATCCCTCATAGTTCAGATAAAAC	GCAGATAGTCGCTGATGTAGGGAAAAAGATTGATATA
GTTTACATCCCTCATAGTTCAGATAAAAC	TTTCATCCCAAATTTGAGAGTTGTATCTGTTTTTCTT
GTTTACATCCCTCATAGTTCAGATAAAAC	TTTAAAAAATTTGATGAAGCTTTGCAAAGACTTAAAA
GTTTACATCCCTCATAGTTCAGATAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP034791.1\|AZT91392.1\|2634596_2636102_-\|xylan-1,4-beta-xylosidase	unknown	unknown	gnl\|CDD\|366525
CP034791.1\|AZT91394.1\|2638259_2642303_-\|carbohydrate-binding-protein	unknown	unknown	gnl\|CDD\|350117
CP034791.1\|AZT91712.1\|2607776_2607992_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP034791.1\|AZT91387.1\|2626122_2627847_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|366703
CP034791.1\|AZT91713.1\|2612015_2612702_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|187789
CP034791.1\|AZT91385.1\|2617104_2617878_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|366760
CP034791.1\|AZT91386.1\|2622427_2623372_-\|transposase	unknown	unknown	gnl\|CDD\|376573
CP034791.1\|AZT91391.1\|2632712_2633513_-\|acetylesterase	unknown	unknown	gnl\|CDD\|223700
CP034791.1\|AZT91714.1\|2617874_2619353_-\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950
CP034791.1\|AZT91379.1\|2608246_2609227_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|187853
CP034791.1\|AZT91383.1\|2613727_2615350_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cd09665_cas8b2_CAS-I-B	gnl\|CDD\|187796
CP034791.1\|AZT91381.1\|2609779_2612008_-\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP034791.1\|AZT91393.1\|2636140_2638243_-\|cellulose-1,4-beta-cellobiosidase	unknown	unknown	gnl\|CDD\|366032
CP034791.1\|AZT91715.1\|2633546_2634542_-\|endo-1,4-beta-xylanase	unknown	unknown	gnl\|CDD\|366032
CP034791.1\|AZT91388.1\|2628017_2629469_-\|beta-xylosidase	unknown	unknown	gnl\|CDD\|366525
CP034791.1\|AZT91380.1\|2609232_2609745_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
CP034791.1\|AZT91390.1\|2630914_2632579_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270300
CP034791.1\|AZT91382.1\|2612724_2613735_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
CP034791.1\|AZT91389.1\|2629502_2630786_-\|endo-1,4-beta-xylanase	unknown	unknown	gnl\|CDD\|214750
CP034791.1\|AZT91384.1\|2615415_2616201_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl\|CDD\|187783

Protein	Function_ID	Function_description	E-value
CP034791.1\|AZT91392.1\|2634596_2636102_-\|xylan-1,4-beta-xylosidase	gnl\|CDD\|366525	pfam01229, Glyco_hydro_39, Glycosyl hydrolases family 39.	0
CP034791.1\|AZT91394.1\|2638259_2642303_-\|carbohydrate-binding-protein	gnl\|CDD\|350117	cd09003, GH43_XynD-like, Glycosyl hydrolase family 43 protein such as Bacillus subtilis arabinoxylan arabinofuranohydrolase (XynD;BsAXH-m23;BSU18160). This glycosyl hydrolase family 43 (GH43) subgroup includes characterized Bacillus subtilis arabinoxylan arabinofuranohydrolase (AXH), Caldicellulosiruptor sp. Tok7B.1 beta-1,4-xylanase (EC 3.2.1.8) / alpha-L-arabinosidase (EC 3.2.1.55) XynA, Caldicellulosiruptor sp. Rt69B.1 xylanase C (EC 3.2.1.8) XynC, and Caldicellulosiruptor saccharolyticus beta-xylosidase (EC 3.2.1.37)/ alpha-L-arabinofuranosidase (EC 3.2.1.55) XynF. It belongs to the glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) which includes family 43 (GH43) and 62 (GH62) families. It belongs to the GH43_AXH-like subgroup which includes enzymes that have been annotated as having beta-xylosidase, alpha-L-arabinofuranosidase and arabinoxylan alpha-L-1,3-arabinofuranohydrolase, xylanase (endo-alpha-L-arabinanase) as well as AXH activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Bacillus subtilis AXH (BsAXH-m2,3) has been shown to cleave arabinose units from O-2- or O-3-mono-substituted xylose residues and superposition of its structure with known structures of the GH43 exo-acting enzymes, beta-xylosidase and alpha-L-arabinanase, each in complex with their substrate, reveals a different orientation of the sugar backbone. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	0
CP034791.1\|AZT91712.1\|2607776_2607992_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.49723e-25
CP034791.1\|AZT91387.1\|2626122_2627847_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	3.89393e-52
CP034791.1\|AZT91713.1\|2612015_2612702_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|187789	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.41182e-31
CP034791.1\|AZT91385.1\|2617104_2617878_-\|AAA-family-ATPase	gnl\|CDD\|366760	pfam01695, IstB_IS21, IstB-like ATP binding protein. This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function.	3.09453e-76
CP034791.1\|AZT91386.1\|2622427_2623372_-\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	1.88365e-12
CP034791.1\|AZT91391.1\|2632712_2633513_-\|acetylesterase	gnl\|CDD\|223700	COG0627, COG0627, Predicted esterase [General function prediction only].	3.5214e-23
CP034791.1\|AZT91714.1\|2617874_2619353_-\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	9.05169e-28
CP034791.1\|AZT91379.1\|2608246_2609227_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	4.75158e-172
CP034791.1\|AZT91383.1\|2613727_2615350_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl\|CDD\|187796	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	6.55755e-22
CP034791.1\|AZT91381.1\|2609779_2612008_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	8.57955e-70
CP034791.1\|AZT91393.1\|2636140_2638243_-\|cellulose-1,4-beta-cellobiosidase	gnl\|CDD\|366032	pfam00331, Glyco_hydro_10, Glycosyl hydrolase family 10.	4.92305e-158
CP034791.1\|AZT91715.1\|2633546_2634542_-\|endo-1,4-beta-xylanase	gnl\|CDD\|366032	pfam00331, Glyco_hydro_10, Glycosyl hydrolase family 10.	6.35248e-124
CP034791.1\|AZT91388.1\|2628017_2629469_-\|beta-xylosidase	gnl\|CDD\|366525	pfam01229, Glyco_hydro_39, Glycosyl hydrolases family 39.	0
CP034791.1\|AZT91380.1\|2609232_2609745_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	5.55006e-64
CP034791.1\|AZT91390.1\|2630914_2632579_-\|extracellular-solute-binding-protein	gnl\|CDD\|270300	cd13582, PBP2_AlgQ_like_3, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	0
CP034791.1\|AZT91382.1\|2612724_2613735_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	4.3577e-51
CP034791.1\|AZT91389.1\|2629502_2630786_-\|endo-1,4-beta-xylanase	gnl\|CDD\|214750	smart00633, Glyco_10, Glycosyl hydrolase family 10.	6.10683e-95
CP034791.1\|AZT91384.1\|2615415_2616201_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	1.06504e-17

>CP034791.1|AZT91714.1|2617874_2619353_-|IS21-family-transposase
MHTTIYTLFKRGYNKSQIARLLDVDRKTVRKVIHDIEQKGEVERKSKGSVLDNYREFIEAKVNKGHSAKKIHQDLQAEFDFEGSYSNVRRYVQKLKQKIANSKVYMVLTTLPAEEAQVDFGYIGKIKVDGKFKKAWVFTMVLSYSRYMYAEIVFDQTVETFIQCHKNAFKYFGGVVEVVKIDNLKAGVLSVDFYEAQIQKDYASFASHYGFLPQPCRVYTPTDKGKVESAIKYVKQNCFSGEEFKDIDEAREHLKNWLDNVANVRVHGTTKKVPKEVFISEEKEKLIALPIEEYYISRSSIHKVATNCHLIYKGNYYSVPYEYAGREVEVVEIGSFLRVFFEGKEIALHQIVKNNEKGKYVTNKEHYPSSKNITIEDIMSRQRDKMAEIGNWALEFFEEFIKREGFKKYDYRSISGIIALKERYGAETVDNACKRALKFGGLSYKVVKNICEKGISDLPEYEDESYVNEERTELYRDIREYNKLLEIGELQI
>CP034791.1|AZT91385.1|2617104_2617878_-|AAA-family-ATPase
MNDLLLGKLKDLKLSGIIKSFDLRVEEAIKNNFSYQEFFEILINDEVSNRRINSNQKRISKARFPWHKTLEEYNFNYQPSINKRFIYNLATCEFVRKKENVAFIGPPGTGKTHLAIAIGLKAVALGYRVLFTTANEMLEELYISRADNSYQQKLKNYVNVDLLIIDELGLRKFNQSSVDDFYEIISKRYERGSIIITTNKVFEEWPRIFYDPVLATAILDRFVHHCHFVVIKGESYRMKQREGAIKALTDDSKNESN
>CP034791.1|AZT91384.1|2615415_2616201_-|CRISPR-associated-endoribonuclease-Cas6
MRAKFIFEVHNGFNETKELPVYYRTLFMAFLKKALSSYNEEYFKRLYWWEDKKNKWQKPFVYAVNLPNMNFSDDKVLFRGDIVLNLSTSDYEFFVNIYNSLISSKLYPHKLANNCEIKLKRAYLIKEPEQFSSTMTFKTFSPVLIEKKEGDDKIPVLPYDEGFEEVLNDVIDFEIRNIRILKGQNRGLHKRISFKPINVKKIVVKHKISEFVENTGKEIMYLTGFGGIFELSGHPDDLKEIYQNGLGFRRGQGFGFIEVVK
>CP034791.1|AZT91383.1|2613727_2615350_-|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MIRIHLNDWFYNMCVVGLCRVLEYAKSNINHNITLNYCDDFIEFEEKYLDDIPKAYFEYFYTEFKKINSSSTETEFLEWLKNDLGQNFIGQASFVNRYTETHKVEVKSDSISGCEYYFNKHFVGPLKECLFNIKNSNHKLPIQIDLEKRKKTAKTGPTSKPCVFCGEISSGDTFDEKRFVPLAVSSDGAKNFFWNGHNNLPICKKCVFLFMFAPAGVSEITYVRYKREDKDKFKKEEEKYKVFVNLDASVEELLKINNALKDRVEEALSATDRFEDSIFRLFAIDLIKYLKTKALWSFENILVVEFNALYSERGTKGVKKSKINYLSFPKHVAKFLVSREGKSITKIQNTEFRNNLVNAILKNEGLERLIFSETYRMLYTSFYKEAYSIYLSVRIKCLLKYYKELITGNQMLKGDEKMVTDRLGVLFKSGRKIAEYYIEKEQENKLPALVYRLLNAAKVGDFHTVFDTIIRVYMNTEIQIPHEFIGLVQSQGASDFKDVIDPLSIAQAFVAGILYEMNKEKGSSTKQDKNENIEEEVENG
>CP034791.1|AZT91382.1|2612724_2613735_-|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MVKKGFTASIIFLGNSLNYGEGFSNFSELKKFARGDGNLYTFGSRQSLRYDIVRLGSERFGWELVETKREGQKGTIQFKIEEKDIAEAIKKYEELDLFGYMITKRAQRGKKKKGNEGEETKDEEKGESLTRSAVVRLSNAISLEPYKNDLEFLSNKGMADRLEDKEKNRNANIANIEFHNSFYTYTITIDLSRVGVIEDNKNVKEVVEKEEKFKRVSELLDVIKFLNRNIRGRCENLSPLFIIGGVYDIVHPFFLGRLQVKGLNQKYYIVKEPIESTLNMQIWNNKKVKDDTYIGAMPGVFENLDEIGSLVPSGVISVDEFFNNVKEKIKDYYEVK
>CP034791.1|AZT91713.1|2612015_2612702_-|type-I-B-CRISPR-associated-protein-Cas5
MLKVKIFQETACYKKPFSLKVAETYPLPPYSTVKGLFHKLLATKDFFYRFNISIQGTYEAVMTNYQKMLFFKDNGDITSMPLSVQLLYNVELLIHVYYPDKKILERLAEKLISPDAYLSVGRHEDLALATDIKFVRAEKIDFSEIEEPYFVKCNLYMPEEYLKSVQENNFGLNGIKFRLNYSYKKLNGLRVWEEKAEVKYIEKGSVIEDGIFLVDEEGDLVAFYPVVR
>CP034791.1|AZT91381.1|2609779_2612008_-|CRISPR-associated-helicase-Cas3'
MNDKIVIYAKSQPPETLQEHVDSLIHNFQILKDVYKKEIDSILPDNVRDIFWDMLYSACVLHDCGKLFTPFQNVIRKHLKKEALKTTFENSIPHSYLSPAFVPKRLLQKYSGYERAFMQAIIYHHERDSLCDDVLYELIVRVIKEELEPKIDIINNQLLNPKLKISLTSLNKKYYKYVSSSNRLVWWDKKGGENEVELLVYILLKGLLVRIDHCASAHVDVEDTTKENLFGKTQCYILNTFKKLNELQDLIKDNKGKNLILIASTGSGKTEAALMWSEDAKTFFILPMRAALNMMYSRIAKDVGIKSVGLLHSTSLQYLLFEEDDHQDAFSIYQSSKYLGKQLLLTTMDQVFTFPFRFKGYERILATLAYSKIIIDEIQGYSPVIAATILKGIEMLHKFGTRFLIMTATLPTIYKDYLKEKGINFETIEYHSQIKRHRIKIKEKDIQADISKIIELAKEKNVLVITNTIAKAVEVYKQIKKAVGEEIKVELLHSQFIQKHRREKEERIKSIQPKSTSGIWITTQIIEASIDVDFDFLFTELSTLDSLFQRMGRCYRKREYDQEEPNVYIYTGNVSGIGKVYDKDIHSISLEMLKNFDKKIISENEKAKLVEELYSYERIKDTKYYNKFREMLNLIESIFDGEFEKQEVHESLRNIFNVRAIPQMYREEAKKLFEQYSAAENVAEKAKIFDRFSEYIVEVPYWRVEKFIEKPRNFFNDIYILNLGYDSNTGINYEEVILSEMI
>CP034791.1|AZT91380.1|2609232_2609745_-|CRISPR-associated-protein-Cas4
MSEQMELQDLKFQGIKINYLYVCKRKLWLFSKNITFENQSDKVLLGKVLHEYSYPKEDAKEVLIDNLIMIDILSDGAVREVKYSSRMKEADIMQVMYYLYYLKQKGIEKQGIINYPKERRKEILELTPEYEQKVKQALSEIEKITSQVTPPPATKQKICKSCAYFEFCWG
>CP034791.1|AZT91379.1|2608246_2609227_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MQKTLYITSNGRLRRKDNTLYFETETEKRSIDIENIEQIHIFGEVDLNTKALNYISQYGIILHFYNYYGFYAGSFMPRKKNVSGDVVVRQALHYLDREKRIFLAYCFVESAVYHMMRNLRERKEAEAFLNAIEDEWENGRFNISSISELMGLEGRVRNIYYSSFNQFLPEDFYMEKREKRPPTNPINALISFGNSLIYSTVLTEIYHTQLDPSISFLHEPSEKRFSLSLDISEIFKPLVVDSVIFKLLNNRQITLEHFDEDLNYCYLNQEGRRIFINELRNKLETTVRHRQLNRNVSYKGYIRLECYKLIKHFIGDQVYSPLKAWW
>CP034791.1|AZT91712.1|2607776_2607992_-|CRISPR-associated-endonuclease-Cas2
MFVIVTYDVNEKRVNKVRKILKKYLTWVQNSVFEGEITYGKLEKCKRELFSVIEKDEDSVYFYEHSCNERK
>CP034791.1|AZT91386.1|2622427_2623372_-|transposase
MTKNIKAQNKKFLKLLFVIKKVTEVLSRKIKQNRRGRPRKFNLFQIIACLVYKVKKGIKSFRELEYRINQDTEFKQVVGIEESPDYSYFAKLSRKIEKEYMQDIKDILIAKIEPDMSIAIVDSTPLRSAKNDSEAKIGIHITIGFFRGYKLHLLCTGKEEVIPLFWILTGANEHDSRQEELLYRAWGFGCEIVLADAGYDCSRWFNIANELKVKFVAGINKRNMKDKNNVKNVFRSKNIRFLETEEGKKLYKQRTKIERLFSKLKGEYNLENVRLKGFRNYKRYIDWILITFLFEQLLRKLEGKKFSFAYEWNQ
>CP034791.1|AZT91387.1|2626122_2627847_-|LysM-peptidoglycan-binding-domain-containing-protein
MAKHTPKGKSAATAAVPDKEKARFVPKNIQAEIKEKIKDTGEKVAKAEGKDKALLQLKLESNKKVDKKKFKKDRSAERNKTSSNRFLSLDKIKSLYSKEIHNKLSHIFEDAVSEVYRILMGLKYIKKAPNYTEIVLKAKIFSTLILMIVILFLINKMPSTYKKAYAVVLNNQIVGYVKDKTEAQNLLAQIKKEVEERHNTDSFILQSKLQLRSIEPGQYRETRVDELKNTIIEKGKVLVKRYAIFVNSKPYFVFENPQTPNNILNKLKKVYYNDKASQAKFLEKVEIKPVYVSPAIKVADENTALTKIMFGKDQVIEYTVKEGDTLWDLSRKYNLAVDDIFASNPGLSEKIMPGQKIKLTKAAPLINVMLEKEVEYEDVLPKEVKVIKSENYYTTQTIVKQEGKDGRAKIRAKIVYMNGLEYDRQIISQQLIQKPVERIVVVGTKKPPAYVATGRFSFPAWGTLTSRFGYRGREFHEGIDLAMPWGSNVYAADGGVVEFTGWSGGYGKLVIINHKNGYQTYYGHLSRILVSPGQKVAKGQLIAKSGSTGRSTGPHLHFEVRKNGVPQNPLRYLR
>CP034791.1|AZT91388.1|2628017_2629469_-|beta-xylosidase
MKITINYGKKLEKINKFWTKCVGSCHATTALREDWRKQLKKCRDELGFEYVRFHGWLNDDMSVCFRNDDGLLSFSFFNIDSIIGFLLEIGMKPFIELSFMPEALASGTKTVFHYKGNITPPKSYEEWGQLIEELARHLISRYGKNEVREWFFEVWNEPNLKDFFWAGTMEEYFKLYKYAAFAIKKVDSELKVGGPATAIDAWIPELKDFCTKNSVPIDFISTHQYPTDLAFSTSSNMEEAMAKAKRGELAERVKKALEEAYPLPVYYTEWNNSPSPRDPYHDIPYDAAFIVKTIIDIIDLPLGCYSYWTFTDIFEECGQSSLPFHGGFGLLNIHGIPKPSYRAFQILDKLSGERIEIEFEDKSPTIDCIAVQNEREIVLVISNHNVPLSPINTENIKVVLKGIKDCHEVFVERIDEYNANPKRVWLEMGSPTYLNREQIEELIKASELKKEKVSWGIVNNNNEVTFDLSVLPHSVVAVTIKNG
>CP034791.1|AZT91389.1|2629502_2630786_-|endo-1,4-beta-xylanase
MKRKWTNILSIAVLSIAMVFFFTSCTIQSAVEQKKTVEEILGKIGESEDKTNSRGQPATMKENEVEDYALKDVYKDYFLVGAAINGYSVETAAINHSGMAAILKKHFNSTTLSNLMKPQYLLDYEATKASKDGMPVCKFDSCIPALQFYKEYGIEMRGHVLVWHNQTPEWFFLKDYDVSKPLVDAATMERRLESYIKQVIEFCQKNYPSVVYCWDVVNEAILDDGSWRETNNNWYTIMKEKYVEKAFYYARKYAKKDVALFYNDYNVFLPAKREAIYNLAQKLKEKGLIDGLGLQPTVGLNYPELDSDDIDSFKTTLKTFAKLGLQIHITELNFEIKGDESNRTPENLKKQADRYYEMMKLLLKEDTDNGGPCNITCVTVFGICDDYPLYKNFKQCMYLWDKNCNPKPCFYSFLQAGLDWKASLLSK
>CP034791.1|AZT91390.1|2630914_2632579_-|extracellular-solute-binding-protein
MRKKRLFAVVIVMTFLISSVIGINLINSKDVQARSVSKTVKVFTFYNGNTNDEPHPNLFDTPIGKEITKLTGVKLKIEYATGQDEATKIGLILASGDLPDLIYGGNEHGKLIEAKVLVPIENYIQKYGKYCKQIYSGKDLKRMKQQDGHIYFLTPHRNEISPDIKPDGFWLPIDLLEKAKWPKVRYWEDYLKLIRDYVKKNPKIEGYPTIGFTFITESWRFFTLENPPSYLMGYQNDGDVIVDPKTFEAKVYSTMEASKRYYRDLNKLWQEGLIDKEVFVQNYDTYLSKIAQGRVVGFYDQYWQFGYDAEESLKNAKKYNRLHISFPVVYRGVQRAKYVMRSPIGSRDGISITKKCKDPVGAFKFLDTLCSMEAQKLMYWGIKGVDYSVDKNGKMYLTDQQKKNREDPQYRRKRGLGYWWTFPHAYLKLQDGNYREPGFDPDYVYKNFTSAEKKVLDAYKAKTFMQLPFTDPPLETPYGFAWEINIPAERKDVTIAQQKMSEVRRKYLPRLVMAKPGEYDKIWNEFVKEFEKTNYKVYEKFKTEIIKWKVKNWN
>CP034791.1|AZT91391.1|2632712_2633513_-|acetylesterase
MAIMQINFYSKMLKKNTTILAILPVDKPDKKFQKDVDSENLKTLYLLHGYAGNYMDWLCGARIVELSMRYNVAVFLPSGENSFYLDDEEKEEYFGEFVGNEIIEFTRNVFPIPQKREKTFIGGLSMGGYGALRNGLKYNKNFAGIIALSSALIIHKIAGIPKDYRNAYASYNYYRRVFGDLNSLIGSDKDINALVTKLKQEKGSIPKIYMACGKDDFLVQENRDLFNFLKNEGIDVIYEEDEGGHDWDFWNKHIKKAFEWLNKLSN
>CP034791.1|AZT91715.1|2633546_2634542_-|endo-1,4-beta-xylanase
MLNLSLAKTYKDYFKIGAAVTAKDLEGVHREILLKHFNSLTPENAMKFENIHPEEQRYNFEEVDRIRNFAIENNMKMRGHTFVWHNQTPGWVFLDKNGEEASKELVIERLREHIKTLCERYKDVVYAWDVVNEAVEDKTEKLLRESNWRKIIGDDYIKIAFEIAREYAGDAKLFYNDYNNEMPYKLEKTYKVLKELLERGTPIDGIGIQAHWNIWDKNLVSNLKKAIEVYASLGLEIHITELDISVFEFEDRRTDLFEPTPEMLELQAKVYEDVFAVFREYKDVITSVTLWGISDRHTWKDNFPVKGRKDWPLLFDVNGKPKEALYRILRF
>CP034791.1|AZT91392.1|2634596_2636102_-|xylan-1,4-beta-xylosidase
MTNIKIEKGKQIGIFPDKWKFCVGSGRIGLALQKEYIDALSYVKKHIDFKYIRAHGLLHDDVGIYREDIIDGNEVPFYNFTYIDRIYDSFLELGIRPFVEIGFMPSKLASGTQTVFYWRGNVTPPKDYGKWEKLIKSVVKHFIDRYGEKEVIQWPFEIWNEPNLNVFWKDANQAEYFKLYEVTAKAIKEVNENIKVGGPAICGGSDYWIDDFLHFCYKNKVPVDFLTRHAYTGKPPQYTPHFVYQDVHPIEYMLSEFKNVREKVRNSPFPDLPIHITEFNSSYHPLCPIHDTPFNAAYLARVLSEAGDYVDSFSYWTFSDVFEEADVPRAIFHGGFGLVAFNNIPKPVFHMFTFFNAMGNKILYRDEHILITERENGTIAIVAWNEVMKKEEATDKKYKIEIPVDYNDVFIKQKLIDEENGNPWRTWIQMGRPRYPTKEQIETLREVAKPKISTFRMMAENGYITLEFTLSKNAVVLFEISKVVDESDTYIGLDDSKIPGY
>CP034791.1|AZT91393.1|2636140_2638243_-|cellulose-1,4-beta-cellobiosidase
MGKSAYKIVIPLTVAVVLIISSVFSLIYPVIPGAIAQTASVTTVNFEGKDTFTFFAYGNAKIATEQSSAIEGKKSIKVTNRKSIWDSLAIDVKDVLKRGKTWVISSYIKHEGKNPIAFSITALYDDGKGLKYIQLGEKIIMPNKWEKIAAKWNPRLKNLVNLIIAIHPTIDKTTVYSVDNIQIMTEETYLSQAIIYKDTFENNTTNWQPRGEGVKIKLDTSKYHEGNKSLYISGRTAFWHGAKIPIIKYVVPGKRYKFSIWVYHTSMDLKRFSILVQRKMADEAQYRYDWITSSEVAGDSWVEISGSYVVPNNGKIEELDFYIESQDPTLSFWIDDFTISDLLKLQEPNYNLPSLKEKYKDDFKVGVAIGYGELTNSVDTQFIKRHFNSITPGNEMKPESLLRGPDKYDFTIADAFVEFATKNNISIRGHTLVWHNQTPDWFFKDSNGNFLKKDELLKRLKKHIYTVVGRYKGKIYAWDVVNEAIDETQPDGYRRSNWYKICGPEYIEKAFIWAHEADPKAKLFYNDYNTEVPQKRMFIYNMIKKMRSKGIPIHGVGLQCHINVDSPSVEEIEETIKLFSTIPGLEIQITELDMSFYQWGSSVYYVEPSREMLLRQAKKYYELFNLFKKYKKIIKSVTFWGLKDDYSWLRGVFNKPDFPLLFDEYYDGKPAFWALIDYSVVPQNINLPAPPAIPKLNTKK
>CP034791.1|AZT91394.1|2638259_2642303_-|carbohydrate-binding-protein
MANKLLRWIKKIILPATLVICLILSAFVNFQINKAYSSSNQQGGSKLLQNNTIASNPIILADIPDPDIIRVGNDYYMVSTTMHMTPGVPIMHSTDLVNWRIIGYVYDRLEDNDAHNLKNGMNIYGKGQWAPCIRYYKGKFYVLFGALDTGKTYLFSSKNITGPWERVEFNEYLHDPSLLFDDNGKAYIIYGGSEIRVKELTPDLKAINPKGINKVIIKSKIDGLEEGSHAYKINGKYYITTIRWKKGGIREECVYRADKIDGPYEGRVVLSDTLGYKNNGVAQGGLIDTPDGKWYAMLFQDHDAVGRVPVLVPVRWENGWPVFGDEKGKVPLKFVKPGQSSFETEVVKSDEFYQEKAESNPRRFEVIRNAEITKDVELVINNNFARGTIGWKGREGAKLEVVREGSKNIIHVYNRTGPRSGIQQNLTGRVEKGKKYNAVFRVKYVKGPDTKEFILAAKITSNGKESYQELIKGFANKNEWTSISGTFTISQDIETVYLFIQTPVTEKPDKNKDLIDYYVEYVSIKEVLVTQKESEEVAPNGSVLDLTWQWNHNPDNSKWSLLERKGFLRLKTCNVVSDIQQARNTLTQRTLGPKCSGWILMDVRNMKDGDYAGLAAFQKEYGFIGVKKQGKEFYIVMVEKGKEVESTKLQQLMVYLKIDFDFEIDKAYFYYSYDGINWIKFGSDLAMRYTIPHFMGYRFAIFNFATKQTGGYVDIDFFKFSSKLTGEKTEEDLKAYLKEDIIELSNDIDKNYELTVSLNSLPKGKKMTQIKILLKFPKELDVLEALVADKRIKNAVVLVEKKRSDQALINIKNIDTEALDSDNRWIDLVNIKLKQREKLTESFCDEIRIQSLTVNCEKEKINYRSESAVTKVKFVAPKNPIGKIPTNANPLIAHKFGADPAVLVYKDRVYIYLTNDILEYDDNGNIKDNTYSKINKITIISSDDLVNWTDHGEIEVAGPNGIAKWATQSWAPSIAYKKINGKDKFFLYFANNASGIGVLTSDTPVGPWVDPIGKPLISRSTPGVEGVVWLFDPAVLVDDDGKAYIYFGGGVPQGQDAMPNTARVMQLGSDMISVVGSAVTIPAPFMFEDSGINKIGNTYYYSYCTNFYSGARPQGSPPAGVIAYMTSKSPMGPWEYKGVILKNPGNFFGVGGNNHHQLFEFNGKWYIAYHAQTLAKDMGVAKGYRSPHINQVEIENGTIKEVIADYRGIAQVKNFDPYRMVEAETFAWCAGISTKKANGSNDMCLTGIDSGDWIALSKVDFGSVGPQKFEAMVSNINGKGYIEIKIDSVDGRTIAVAEVLPQNSSTSQWVKIEAKVENVTGAHDLYFVFKGEKESNLFDMDCWRFVK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP034791_4	4.1\|46327\|37\|CP034791\|CRISPRCasFinder,CRT	46327-46363	37	NC_014719	Caldicellulosiruptor kristjanssonii I77R1B plasmid pCALKR01, complete sequence	9735-9771	2	0.946
CP034791_4	4.15\|46329\|37\|CP034791\|PILER-CR	46329-46365	37	NC_014719	Caldicellulosiruptor kristjanssonii I77R1B plasmid pCALKR01, complete sequence	9735-9771	2	0.946
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	LT598654	Phage NCTB genome assembly, complete genome: monopartite	53697-53731	3	0.914
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	LT598654	Phage NCTB genome assembly, complete genome: monopartite	53697-53731	3	0.914
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	LT598654	Phage NCTB genome assembly, complete genome: monopartite	53691-53725	4	0.886
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	LT598654	Phage NCTB genome assembly, complete genome: monopartite	54012-54046	4	0.886
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	652609-652643	4	0.886
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	652768-652802	4	0.886
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	652822-652856	4	0.886
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	256686-256720	4	0.886
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	256743-256777	4	0.886
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	256833-256867	4	0.886
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	256968-257002	4	0.886
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MT773556	Myoviridae sp. isolate BML_4 genomic sequence	147272-147306	4	0.886
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	LT598654	Phage NCTB genome assembly, complete genome: monopartite	53691-53725	4	0.886
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	LT598654	Phage NCTB genome assembly, complete genome: monopartite	54012-54046	4	0.886
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	652609-652643	4	0.886
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	652768-652802	4	0.886
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	652822-652856	4	0.886
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	256686-256720	4	0.886
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	256743-256777	4	0.886
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	256833-256867	4	0.886
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	256968-257002	4	0.886
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MT773556	Myoviridae sp. isolate BML_4 genomic sequence	147272-147306	4	0.886
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	NC_010181	Bacillus mycoides KBAB4 plasmid pBWB402, complete sequence	69641-69675	5	0.857
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MK577502	Aeromonas phage Asfd_1, partial genome	140227-140261	5	0.857
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MN871507	UNVERIFIED: Aeromonas phage asfd_1h, complete genome	89180-89214	5	0.857
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MH809535	Yersinia phage PYPS2T, complete genome	6737-6771	5	0.857
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MH992121	UNVERIFIED: Escherichia phage MLF4, partial genome	56694-56728	5	0.857
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	LC465543	Shigella phage SfPhi01 DNA, complete sequence	120761-120795	5	0.857
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MH389777	Dickeya phage vB_DsoM_JA11, complete genome	220297-220331	5	0.857
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MH389777	Dickeya phage vB_DsoM_JA11, complete genome	246002-246036	5	0.857
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MH460462	Dickeya phage vB_DsoM_JA33, complete genome	220414-220448	5	0.857
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	NC_010181	Bacillus mycoides KBAB4 plasmid pBWB402, complete sequence	69641-69675	5	0.857
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MK577502	Aeromonas phage Asfd_1, partial genome	140227-140261	5	0.857
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MN871507	UNVERIFIED: Aeromonas phage asfd_1h, complete genome	89180-89214	5	0.857
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MH809535	Yersinia phage PYPS2T, complete genome	6737-6771	5	0.857
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MH992121	UNVERIFIED: Escherichia phage MLF4, partial genome	56694-56728	5	0.857
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	LC465543	Shigella phage SfPhi01 DNA, complete sequence	120761-120795	5	0.857
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MH389777	Dickeya phage vB_DsoM_JA11, complete genome	220297-220331	5	0.857
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MH389777	Dickeya phage vB_DsoM_JA11, complete genome	246002-246036	5	0.857
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MH460462	Dickeya phage vB_DsoM_JA33, complete genome	220414-220448	5	0.857
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MT773556	Myoviridae sp. isolate BML_4 genomic sequence	147278-147312	6	0.829
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	NZ_CP032289	Acinetobacter lwoffii strain ED9-5a plasmid pALWED3.4, complete sequence	64-98	6	0.829
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MN094788	Achromobacter phage Motura, complete genome	27319-27353	6	0.829
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MH248138	Erwinia phage vB_EamM_Alexandra, complete genome	200700-200734	6	0.829
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	NC_021668	Psychrobacter sp. G plasmid PsyG_26, complete sequence	22827-22861	6	0.829
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MT939488	Erwinia phage pEa_SNUABM_50, complete genome	272457-272491	6	0.829
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MT611523	Escherichia phage DK-13, complete genome	21141-21175	6	0.829
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MT773556	Myoviridae sp. isolate BML_4 genomic sequence	147278-147312	6	0.829
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	NZ_CP032289	Acinetobacter lwoffii strain ED9-5a plasmid pALWED3.4, complete sequence	64-98	6	0.829
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MN094788	Achromobacter phage Motura, complete genome	27319-27353	6	0.829
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MH248138	Erwinia phage vB_EamM_Alexandra, complete genome	200700-200734	6	0.829
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	NC_021668	Psychrobacter sp. G plasmid PsyG_26, complete sequence	22827-22861	6	0.829
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MT939488	Erwinia phage pEa_SNUABM_50, complete genome	272457-272491	6	0.829
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MT611523	Escherichia phage DK-13, complete genome	21141-21175	6	0.829
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	NZ_CP042584	Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence	2494-2528	7	0.8
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	NZ_CP042584	Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence	67204-67238	7	0.8
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	NZ_CP042584	Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence	69148-69182	7	0.8
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	NZ_CP042584	Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence	75883-75917	7	0.8
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	NC_047815	Erwinia phage vB_EamM_Yoloswag, complete genome	249008-249042	7	0.8
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MH389777	Dickeya phage vB_DsoM_JA11, complete genome	245875-245909	7	0.8
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MH248138	Erwinia phage vB_EamM_Alexandra, complete genome	256041-256075	7	0.8
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MH460462	Dickeya phage vB_DsoM_JA33, complete genome	245992-246026	7	0.8
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MH460463	Dickeya phage vB_DsoM_AD1, complete genome	251079-251113	7	0.8
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MK521907	Klebsiella phage vB_KpnS_FZ41, complete genome	24623-24657	7	0.8
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	NC_019487	Bacillus phage SP10, complete genome	121743-121777	7	0.8
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	AB605730	Bacillus phage SP10 DNA, complete sequence	121743-121777	7	0.8
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	KX452694	UNVERIFIED: Escherichia phage KPN1 genomic sequence	92000-92034	7	0.8
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MH460460	Dickeya phage vB_DsoM_JA13, complete genome	244727-244761	7	0.8
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	KX452698	UNVERIFIED: Shigella phage KPN5 genomic sequence	103383-103417	7	0.8
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	KY984068	Erwinia phage vB_EamM_Y3, complete genome	250558-250592	7	0.8
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	KY984068	Erwinia phage vB_EamM_Y3, complete genome	250279-250313	7	0.8
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	NZ_CP042584	Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence	2494-2528	7	0.8
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	NZ_CP042584	Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence	67204-67238	7	0.8
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	NZ_CP042584	Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence	69148-69182	7	0.8
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	NZ_CP042584	Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence	75883-75917	7	0.8
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	NC_047815	Erwinia phage vB_EamM_Yoloswag, complete genome	249008-249042	7	0.8
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MH389777	Dickeya phage vB_DsoM_JA11, complete genome	245875-245909	7	0.8
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MH248138	Erwinia phage vB_EamM_Alexandra, complete genome	256041-256075	7	0.8
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MH460462	Dickeya phage vB_DsoM_JA33, complete genome	245992-246026	7	0.8
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MH460463	Dickeya phage vB_DsoM_AD1, complete genome	251079-251113	7	0.8
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MK521907	Klebsiella phage vB_KpnS_FZ41, complete genome	24623-24657	7	0.8
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	NC_019487	Bacillus phage SP10, complete genome	121743-121777	7	0.8
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	AB605730	Bacillus phage SP10 DNA, complete sequence	121743-121777	7	0.8
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	KX452694	UNVERIFIED: Escherichia phage KPN1 genomic sequence	92000-92034	7	0.8
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MH460460	Dickeya phage vB_DsoM_JA13, complete genome	244727-244761	7	0.8
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	KX452698	UNVERIFIED: Shigella phage KPN5 genomic sequence	103383-103417	7	0.8
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	KY984068	Erwinia phage vB_EamM_Y3, complete genome	250558-250592	7	0.8
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	KY984068	Erwinia phage vB_EamM_Y3, complete genome	250279-250313	7	0.8
CP034791_3	3.16\|37222\|34\|CP034791\|PILER-CR	37222-37255	34	MT080583	UNVERIFIED: Staphylococcus phage vB_SauM_EW13, complete genome	9252-9285	7	0.794
CP034791_3	3.16\|37222\|34\|CP034791\|PILER-CR	37222-37255	34	MT080586	UNVERIFIED: Staphylococcus phage vB_SauM_EW2, complete genome	129737-129770	7	0.794
CP034791_3	3.16\|37222\|34\|CP034791\|PILER-CR	37222-37255	34	MT080594	UNVERIFIED: Staphylococcus phage vB_SauM_EW4, complete genome	43900-43933	7	0.794
CP034791_3	3.16\|37222\|34\|CP034791\|PILER-CR	37222-37255	34	MT080582	UNVERIFIED: Staphylococcus phage vB_SauM_EW1, complete genome	61803-61836	7	0.794
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MN094788	Achromobacter phage Motura, complete genome	27736-27770	8	0.771
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	NC_047815	Erwinia phage vB_EamM_Yoloswag, complete genome	248615-248649	8	0.771
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	NC_047815	Erwinia phage vB_EamM_Yoloswag, complete genome	248699-248733	8	0.771
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MH248138	Erwinia phage vB_EamM_Alexandra, complete genome	8203-8237	8	0.771
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	NC_019487	Bacillus phage SP10, complete genome	121815-121849	8	0.771
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	AB605730	Bacillus phage SP10 DNA, complete sequence	121815-121849	8	0.771
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MT478993	Escherichia phage vB_EcoS_011D5, complete genome	4587-4621	8	0.771
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MT939487	Erwinia phage pEa_SNUABM_47, complete genome	272583-272617	8	0.771
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	NC_041917	Serratia phage BF, complete genome	273291-273325	8	0.771
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MN094788	Achromobacter phage Motura, complete genome	27736-27770	8	0.771
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	NC_047815	Erwinia phage vB_EamM_Yoloswag, complete genome	248615-248649	8	0.771
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	NC_047815	Erwinia phage vB_EamM_Yoloswag, complete genome	248699-248733	8	0.771
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MH248138	Erwinia phage vB_EamM_Alexandra, complete genome	8203-8237	8	0.771
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	NC_019487	Bacillus phage SP10, complete genome	121815-121849	8	0.771
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	AB605730	Bacillus phage SP10 DNA, complete sequence	121815-121849	8	0.771
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MT478993	Escherichia phage vB_EcoS_011D5, complete genome	4587-4621	8	0.771
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MT939487	Erwinia phage pEa_SNUABM_47, complete genome	272583-272617	8	0.771
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	NC_041917	Serratia phage BF, complete genome	273291-273325	8	0.771
CP034791_5	5.2\|48769\|36\|CP034791\|CRISPRCasFinder,CRT,PILER-CR	48769-48804	36	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	322485-322520	8	0.778
CP034791_1	1.6\|11441\|36\|CP034791\|CRISPRCasFinder,CRT	11441-11476	36	NC_018493	Bacillus cereus FRI-35 plasmid p02, complete sequence	16210-16245	9	0.75
CP034791_1	1.17\|11442\|36\|CP034791\|PILER-CR	11442-11477	36	NC_018493	Bacillus cereus FRI-35 plasmid p02, complete sequence	16210-16245	9	0.75
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MK373789	Escherichia phage vB_EcoS_PTXU06, complete genome	38823-38857	9	0.743
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MN850575	Escherichia phage rolling, complete genome	8855-8889	9	0.743
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	MF360958	Salicola phage SCTP-2, complete genome	115720-115754	9	0.743
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MK373789	Escherichia phage vB_EcoS_PTXU06, complete genome	38823-38857	9	0.743
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MN850575	Escherichia phage rolling, complete genome	8855-8889	9	0.743
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	MF360958	Salicola phage SCTP-2, complete genome	115720-115754	9	0.743
CP034791_5	5.3\|48835\|36\|CP034791\|CRISPRCasFinder,CRT,PILER-CR	48835-48870	36	NZ_CP042394	Leuconostoc citreum strain CBA3623 plasmid unnamed1, complete sequence	5132-5167	9	0.75
CP034791_12	12.18\|2620688\|36\|CP034791\|PILER-CR,CRISPRCasFinder,CRT	2620688-2620723	36	NZ_CP031220	Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence	136680-136715	9	0.75
CP034791_2	2.2\|34405\|35\|CP034791\|CRISPRCasFinder,CRT	34405-34439	35	NZ_CP024657	Bacillus cereus strain MLY1 plasmid pMLY1.1, complete sequence	143489-143523	10	0.714
CP034791_2	2.9\|34407\|35\|CP034791\|PILER-CR	34407-34441	35	NZ_CP024657	Bacillus cereus strain MLY1 plasmid pMLY1.1, complete sequence	143489-143523	10	0.714
CP034791_10	10.1\|110889\|36\|CP034791\|CRISPRCasFinder	110889-110924	36	NZ_CP039286	Leptospira interrogans strain FMAS_AW1 plasmid pLiSL3, complete sequence	35848-35883	12	0.667
CP034791_10	10.1\|110889\|36\|CP034791\|CRISPRCasFinder	110889-110924	36	NZ_CP039286	Leptospira interrogans strain FMAS_AW1 plasmid pLiSL3, complete sequence	52277-52312	12	0.667

1. spacer 4.1|46327|37|CP034791|CRISPRCasFinder,CRT matches to NC_014719 (Caldicellulosiruptor kristjanssonii I77R1B plasmid pCALKR01, complete sequence) position: , mismatch: 2, identity: 0.946

atgaagatttaaacgactattcgattgtgctgaaagt	CRISPR spacer
atgaagacttaaacgactattcgattgtgctaaaagt	Protospacer
*******.***********************.*****

2. spacer 4.15|46329|37|CP034791|PILER-CR matches to NC_014719 (Caldicellulosiruptor kristjanssonii I77R1B plasmid pCALKR01, complete sequence) position: , mismatch: 2, identity: 0.946

atgaagatttaaacgactattcgattgtgctgaaagt	CRISPR spacer
atgaagacttaaacgactattcgattgtgctaaaagt	Protospacer
*******.***********************.*****

3. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to LT598654 (Phage NCTB genome assembly, complete genome: monopartite) position: , mismatch: 3, identity: 0.914

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgaagacgaagacggtg	Protospacer
********* **********************..*

4. spacer 2.9|34407|35|CP034791|PILER-CR matches to LT598654 (Phage NCTB genome assembly, complete genome: monopartite) position: , mismatch: 3, identity: 0.914

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgaagacgaagacggtg	Protospacer
********* **********************..*

5. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to LT598654 (Phage NCTB genome assembly, complete genome: monopartite) position: , mismatch: 4, identity: 0.886

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
cgaagatgaagatgaagatgaagatgaagacgaag	Protospacer
.******** **************.******** *

6. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to LT598654 (Phage NCTB genome assembly, complete genome: monopartite) position: , mismatch: 4, identity: 0.886

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
cgaagatgaagatgaagatgaagacgaggacgaag	Protospacer
.******** *****************.***** *

7. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 4, identity: 0.886

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agaagatgatgatgaagaagaagacgaagaagatg	Protospacer
 ***************** *********** **.*

8. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 4, identity: 0.886

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
cgaagaagatgatgaagaagaagacgaagacgaag	Protospacer
.***** *********** ************** *

9. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 4, identity: 0.886

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
cgaagaagatgatgaagaagaagacgaagacgaag	Protospacer
.***** *********** ************** *

10. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 4, identity: 0.886

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agacgatgatgatgaagacgaagacgaagacgatg	Protospacer
 ** **************.**************.*

11. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 4, identity: 0.886

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agacgatgatgatgaagacgaagacgaagacgaag	Protospacer
 ** **************.************** *

12. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 4, identity: 0.886

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agacgatgatgatgaagacgaagacgaagacgatg	Protospacer
 ** **************.**************.*

13. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 4, identity: 0.886

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agacgatgatgatgaagacgaagacgaagacgaag	Protospacer
 ** **************.************** *

14. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MT773556 (Myoviridae sp. isolate BML_4 genomic sequence) position: , mismatch: 4, identity: 0.886

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agaagatgaagatgaagatgaagaggaagacgaag	Protospacer
 ******** ************** ******** *

15. spacer 2.9|34407|35|CP034791|PILER-CR matches to LT598654 (Phage NCTB genome assembly, complete genome: monopartite) position: , mismatch: 4, identity: 0.886

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
cgaagatgaagatgaagatgaagatgaagacgaag	Protospacer
.******** **************.******** *

16. spacer 2.9|34407|35|CP034791|PILER-CR matches to LT598654 (Phage NCTB genome assembly, complete genome: monopartite) position: , mismatch: 4, identity: 0.886

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
cgaagatgaagatgaagatgaagacgaggacgaag	Protospacer
.******** *****************.***** *

17. spacer 2.9|34407|35|CP034791|PILER-CR matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 4, identity: 0.886

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agaagatgatgatgaagaagaagacgaagaagatg	Protospacer
 ***************** *********** **.*

18. spacer 2.9|34407|35|CP034791|PILER-CR matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 4, identity: 0.886

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
cgaagaagatgatgaagaagaagacgaagacgaag	Protospacer
.***** *********** ************** *

19. spacer 2.9|34407|35|CP034791|PILER-CR matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 4, identity: 0.886

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
cgaagaagatgatgaagaagaagacgaagacgaag	Protospacer
.***** *********** ************** *

20. spacer 2.9|34407|35|CP034791|PILER-CR matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 4, identity: 0.886

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agacgatgatgatgaagacgaagacgaagacgatg	Protospacer
 ** **************.**************.*

21. spacer 2.9|34407|35|CP034791|PILER-CR matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 4, identity: 0.886

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agacgatgatgatgaagacgaagacgaagacgaag	Protospacer
 ** **************.************** *

22. spacer 2.9|34407|35|CP034791|PILER-CR matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 4, identity: 0.886

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agacgatgatgatgaagacgaagacgaagacgatg	Protospacer
 ** **************.**************.*

23. spacer 2.9|34407|35|CP034791|PILER-CR matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 4, identity: 0.886

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agacgatgatgatgaagacgaagacgaagacgaag	Protospacer
 ** **************.************** *

24. spacer 2.9|34407|35|CP034791|PILER-CR matches to MT773556 (Myoviridae sp. isolate BML_4 genomic sequence) position: , mismatch: 4, identity: 0.886

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agaagatgaagatgaagatgaagaggaagacgaag	Protospacer
 ******** ************** ******** *

25. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to NC_010181 (Bacillus mycoides KBAB4 plasmid pBWB402, complete sequence) position: , mismatch: 5, identity: 0.857

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agaagaagacgatgaagatgaagacgaagacaaag	Protospacer
 ***** **.*********************.* *

26. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MK577502 (Aeromonas phage Asfd_1, partial genome) position: , mismatch: 5, identity: 0.857

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
ccatgatgatgacgaagatgaagacgaagaggacg	Protospacer
. * ********.***************** ****

27. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MN871507 (UNVERIFIED: Aeromonas phage asfd_1h, complete genome) position: , mismatch: 5, identity: 0.857

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
ccatgatgatgacgaagatgaagacgaagaggacg	Protospacer
. * ********.***************** ****

28. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MH809535 (Yersinia phage PYPS2T, complete genome) position: , mismatch: 5, identity: 0.857

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgatgacgaagatagcg	Protospacer
********* *********** ********...**

29. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MH992121 (UNVERIFIED: Escherichia phage MLF4, partial genome) position: , mismatch: 5, identity: 0.857

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgatgacgaagatagcg	Protospacer
********* *********** ********...**

30. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to LC465543 (Shigella phage SfPhi01 DNA, complete sequence) position: , mismatch: 5, identity: 0.857

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgatgacgaagatagcg	Protospacer
********* *********** ********...**

31. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MH389777 (Dickeya phage vB_DsoM_JA11, complete genome) position: , mismatch: 5, identity: 0.857

tgaagat---gatgatgaagatgaagacgaagacgacg	CRISPR spacer
---agttctggatgatgaagacgaagacgaagacgacg	Protospacer
   ** *   ***********.****************

32. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MH389777 (Dickeya phage vB_DsoM_JA11, complete genome) position: , mismatch: 5, identity: 0.857

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
ggcaaatggtgacgaagatgaagacgaagacgacg	Protospacer
 * *.***.***.**********************

33. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MH460462 (Dickeya phage vB_DsoM_JA33, complete genome) position: , mismatch: 5, identity: 0.857

tgaagat---gatgatgaagatgaagacgaagacgacg	CRISPR spacer
---agttctggatgatgaagacgaagacgaagacgacg	Protospacer
   ** *   ***********.****************

34. spacer 2.9|34407|35|CP034791|PILER-CR matches to NC_010181 (Bacillus mycoides KBAB4 plasmid pBWB402, complete sequence) position: , mismatch: 5, identity: 0.857

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agaagaagacgatgaagatgaagacgaagacaaag	Protospacer
 ***** **.*********************.* *

35. spacer 2.9|34407|35|CP034791|PILER-CR matches to MK577502 (Aeromonas phage Asfd_1, partial genome) position: , mismatch: 5, identity: 0.857

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
ccatgatgatgacgaagatgaagacgaagaggacg	Protospacer
. * ********.***************** ****

36. spacer 2.9|34407|35|CP034791|PILER-CR matches to MN871507 (UNVERIFIED: Aeromonas phage asfd_1h, complete genome) position: , mismatch: 5, identity: 0.857

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
ccatgatgatgacgaagatgaagacgaagaggacg	Protospacer
. * ********.***************** ****

37. spacer 2.9|34407|35|CP034791|PILER-CR matches to MH809535 (Yersinia phage PYPS2T, complete genome) position: , mismatch: 5, identity: 0.857

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgatgacgaagatagcg	Protospacer
********* *********** ********...**

38. spacer 2.9|34407|35|CP034791|PILER-CR matches to MH992121 (UNVERIFIED: Escherichia phage MLF4, partial genome) position: , mismatch: 5, identity: 0.857

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgatgacgaagatagcg	Protospacer
********* *********** ********...**

39. spacer 2.9|34407|35|CP034791|PILER-CR matches to LC465543 (Shigella phage SfPhi01 DNA, complete sequence) position: , mismatch: 5, identity: 0.857

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgatgacgaagatagcg	Protospacer
********* *********** ********...**

40. spacer 2.9|34407|35|CP034791|PILER-CR matches to MH389777 (Dickeya phage vB_DsoM_JA11, complete genome) position: , mismatch: 5, identity: 0.857

tgaagat---gatgatgaagatgaagacgaagacgacg	CRISPR spacer
---agttctggatgatgaagacgaagacgaagacgacg	Protospacer
   ** *   ***********.****************

41. spacer 2.9|34407|35|CP034791|PILER-CR matches to MH389777 (Dickeya phage vB_DsoM_JA11, complete genome) position: , mismatch: 5, identity: 0.857

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
ggcaaatggtgacgaagatgaagacgaagacgacg	Protospacer
 * *.***.***.**********************

42. spacer 2.9|34407|35|CP034791|PILER-CR matches to MH460462 (Dickeya phage vB_DsoM_JA33, complete genome) position: , mismatch: 5, identity: 0.857

tgaagat---gatgatgaagatgaagacgaagacgacg	CRISPR spacer
---agttctggatgatgaagacgaagacgaagacgacg	Protospacer
   ** *   ***********.****************

43. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MT773556 (Myoviridae sp. isolate BML_4 genomic sequence) position: , mismatch: 6, identity: 0.829

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagaggaagacgaagaagcta	Protospacer
********* ******** *********** * ..

44. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to NZ_CP032289 (Acinetobacter lwoffii strain ED9-5a plasmid pALWED3.4, complete sequence) position: , mismatch: 6, identity: 0.829

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgaagatgaagggcatg	Protospacer
********* **************.****.  *.*

45. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MN094788 (Achromobacter phage Motura, complete genome) position: , mismatch: 6, identity: 0.829

--tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
gtcgaag--gatgatgatgatgacgacgaagacgagg	Protospacer
  .****  ******** ***** *********** *

46. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MH248138 (Erwinia phage vB_EamM_Alexandra, complete genome) position: , mismatch: 6, identity: 0.829

tgaagat-gatgatgaagatgaagacgaagacgacg	CRISPR spacer
-gaagtcagatgatgacgacgaagacgaagacgaca	Protospacer
 **** . ******** **.***************.

47. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to NC_021668 (Psychrobacter sp. G plasmid PsyG_26, complete sequence) position: , mismatch: 6, identity: 0.829

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tcaagatgattatgaagatgaagatgaagactatt	Protospacer
* ******** *************.****** *.

48. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MT939488 (Erwinia phage pEa_SNUABM_50, complete genome) position: , mismatch: 6, identity: 0.829

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
caacgattatgatgaagacgaagacgaagacgaag	Protospacer
..* *** **********.************** *

49. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MT611523 (Escherichia phage DK-13, complete genome) position: , mismatch: 6, identity: 0.829

---tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
gcctaaa---gatgatgaagatgaagacaaggacgacg	Protospacer
   *.**   ******************.*.*******

50. spacer 2.9|34407|35|CP034791|PILER-CR matches to MT773556 (Myoviridae sp. isolate BML_4 genomic sequence) position: , mismatch: 6, identity: 0.829

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagaggaagacgaagaagcta	Protospacer
********* ******** *********** * ..

51. spacer 2.9|34407|35|CP034791|PILER-CR matches to NZ_CP032289 (Acinetobacter lwoffii strain ED9-5a plasmid pALWED3.4, complete sequence) position: , mismatch: 6, identity: 0.829

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgaagatgaagggcatg	Protospacer
********* **************.****.  *.*

52. spacer 2.9|34407|35|CP034791|PILER-CR matches to MN094788 (Achromobacter phage Motura, complete genome) position: , mismatch: 6, identity: 0.829

--tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
gtcgaag--gatgatgatgatgacgacgaagacgagg	Protospacer
  .****  ******** ***** *********** *

53. spacer 2.9|34407|35|CP034791|PILER-CR matches to MH248138 (Erwinia phage vB_EamM_Alexandra, complete genome) position: , mismatch: 6, identity: 0.829

tgaagat-gatgatgaagatgaagacgaagacgacg	CRISPR spacer
-gaagtcagatgatgacgacgaagacgaagacgaca	Protospacer
 **** . ******** **.***************.

54. spacer 2.9|34407|35|CP034791|PILER-CR matches to NC_021668 (Psychrobacter sp. G plasmid PsyG_26, complete sequence) position: , mismatch: 6, identity: 0.829

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tcaagatgattatgaagatgaagatgaagactatt	Protospacer
* ******** *************.****** *.

55. spacer 2.9|34407|35|CP034791|PILER-CR matches to MT939488 (Erwinia phage pEa_SNUABM_50, complete genome) position: , mismatch: 6, identity: 0.829

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
caacgattatgatgaagacgaagacgaagacgaag	Protospacer
..* *** **********.************** *

56. spacer 2.9|34407|35|CP034791|PILER-CR matches to MT611523 (Escherichia phage DK-13, complete genome) position: , mismatch: 6, identity: 0.829

---tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
gcctaaa---gatgatgaagatgaagacaaggacgacg	Protospacer
   *.**   ******************.*.*******

57. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to NZ_CP042584 (Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgaagatgaatgccagt	Protospacer
********* **************.*** .* *

58. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to NZ_CP042584 (Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgaagatgaatgccagt	Protospacer
********* **************.*** .* *

59. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to NZ_CP042584 (Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgaagatgaatgccagt	Protospacer
********* **************.*** .* *

60. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to NZ_CP042584 (Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgaagatgaatgccagt	Protospacer
********* **************.*** .* *

61. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to NC_047815 (Erwinia phage vB_EamM_Yoloswag, complete genome) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agacttcgacgatgaagacgaagacgaagacgacg	Protospacer
 **   .**.********.****************

62. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MH389777 (Dickeya phage vB_DsoM_JA11, complete genome) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
cttcgctggtgacgaagatgaagacgaagacgacg	Protospacer
.   * **.***.**********************

63. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MH248138 (Erwinia phage vB_EamM_Alexandra, complete genome) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agacttcgacgatgaagacgaagacgaagacgacg	Protospacer
 **   .**.********.****************

64. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MH460462 (Dickeya phage vB_DsoM_JA33, complete genome) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
cttcgctggtgacgaagatgaagacgaagacgacg	Protospacer
.   * **.***.**********************

65. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MH460463 (Dickeya phage vB_DsoM_AD1, complete genome) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agacttcgacgatgaagacgaagacgaagacgacg	Protospacer
 **   .**.********.****************

66. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MK521907 (Klebsiella phage vB_KpnS_FZ41, complete genome) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgaagatgaagttaagt	Protospacer
********* **************.**** ..*

67. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to NC_019487 (Bacillus phage SP10, complete genome) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agaccttgatgatgaagatgaagatgaagatgaag	Protospacer
 **   ******************.*****.** *

68. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to AB605730 (Bacillus phage SP10 DNA, complete sequence) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agaccttgatgatgaagatgaagatgaagatgaag	Protospacer
 **   ******************.*****.** *

69. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to KX452694 (UNVERIFIED: Escherichia phage KPN1 genomic sequence) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
acctgatgatgatgaggatgatgacgaagacgagg	Protospacer
    ***********.***** *********** *

70. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MH460460 (Dickeya phage vB_DsoM_JA13, complete genome) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
cttcgctggtgacgaagatgaagacgaagacgacg	Protospacer
.   * **.***.**********************

71. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to KX452698 (UNVERIFIED: Shigella phage KPN5 genomic sequence) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
acctgatgatgatgaggatgatgacgaagacgagg	Protospacer
    ***********.***** *********** *

72. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to KY984068 (Erwinia phage vB_EamM_Y3, complete genome) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agacttcgacgatgaagacgaagacgaagacgacg	Protospacer
 **   .**.********.****************

73. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to KY984068 (Erwinia phage vB_EamM_Y3, complete genome) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agacgactctgatgaagaggacgacgaagacgacg	Protospacer
 ** **.  ********* ** *************

74. spacer 2.9|34407|35|CP034791|PILER-CR matches to NZ_CP042584 (Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgaagatgaatgccagt	Protospacer
********* **************.*** .* *

75. spacer 2.9|34407|35|CP034791|PILER-CR matches to NZ_CP042584 (Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgaagatgaatgccagt	Protospacer
********* **************.*** .* *

76. spacer 2.9|34407|35|CP034791|PILER-CR matches to NZ_CP042584 (Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgaagatgaatgccagt	Protospacer
********* **************.*** .* *

77. spacer 2.9|34407|35|CP034791|PILER-CR matches to NZ_CP042584 (Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgaagatgaatgccagt	Protospacer
********* **************.*** .* *

78. spacer 2.9|34407|35|CP034791|PILER-CR matches to NC_047815 (Erwinia phage vB_EamM_Yoloswag, complete genome) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agacttcgacgatgaagacgaagacgaagacgacg	Protospacer
 **   .**.********.****************

79. spacer 2.9|34407|35|CP034791|PILER-CR matches to MH389777 (Dickeya phage vB_DsoM_JA11, complete genome) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
cttcgctggtgacgaagatgaagacgaagacgacg	Protospacer
.   * **.***.**********************

80. spacer 2.9|34407|35|CP034791|PILER-CR matches to MH248138 (Erwinia phage vB_EamM_Alexandra, complete genome) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agacttcgacgatgaagacgaagacgaagacgacg	Protospacer
 **   .**.********.****************

81. spacer 2.9|34407|35|CP034791|PILER-CR matches to MH460462 (Dickeya phage vB_DsoM_JA33, complete genome) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
cttcgctggtgacgaagatgaagacgaagacgacg	Protospacer
.   * **.***.**********************

82. spacer 2.9|34407|35|CP034791|PILER-CR matches to MH460463 (Dickeya phage vB_DsoM_AD1, complete genome) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agacttcgacgatgaagacgaagacgaagacgacg	Protospacer
 **   .**.********.****************

83. spacer 2.9|34407|35|CP034791|PILER-CR matches to MK521907 (Klebsiella phage vB_KpnS_FZ41, complete genome) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgaagatgaagttaagt	Protospacer
********* **************.**** ..*

84. spacer 2.9|34407|35|CP034791|PILER-CR matches to NC_019487 (Bacillus phage SP10, complete genome) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agaccttgatgatgaagatgaagatgaagatgaag	Protospacer
 **   ******************.*****.** *

85. spacer 2.9|34407|35|CP034791|PILER-CR matches to AB605730 (Bacillus phage SP10 DNA, complete sequence) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agaccttgatgatgaagatgaagatgaagatgaag	Protospacer
 **   ******************.*****.** *

86. spacer 2.9|34407|35|CP034791|PILER-CR matches to KX452694 (UNVERIFIED: Escherichia phage KPN1 genomic sequence) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
acctgatgatgatgaggatgatgacgaagacgagg	Protospacer
    ***********.***** *********** *

87. spacer 2.9|34407|35|CP034791|PILER-CR matches to MH460460 (Dickeya phage vB_DsoM_JA13, complete genome) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
cttcgctggtgacgaagatgaagacgaagacgacg	Protospacer
.   * **.***.**********************

88. spacer 2.9|34407|35|CP034791|PILER-CR matches to KX452698 (UNVERIFIED: Shigella phage KPN5 genomic sequence) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
acctgatgatgatgaggatgatgacgaagacgagg	Protospacer
    ***********.***** *********** *

89. spacer 2.9|34407|35|CP034791|PILER-CR matches to KY984068 (Erwinia phage vB_EamM_Y3, complete genome) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agacttcgacgatgaagacgaagacgaagacgacg	Protospacer
 **   .**.********.****************

90. spacer 2.9|34407|35|CP034791|PILER-CR matches to KY984068 (Erwinia phage vB_EamM_Y3, complete genome) position: , mismatch: 7, identity: 0.8

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agacgactctgatgaagaggacgacgaagacgacg	Protospacer
 ** **.  ********* ** *************

91. spacer 3.16|37222|34|CP034791|PILER-CR matches to MT080583 (UNVERIFIED: Staphylococcus phage vB_SauM_EW13, complete genome) position: , mismatch: 7, identity: 0.794

aatagaaggtgataatagcaagcaaaaagaacgt	CRISPR spacer
gaaacaatatgatgatagtaagcaaaaagaacgt	Protospacer
.* * ** .****.****.***************

92. spacer 3.16|37222|34|CP034791|PILER-CR matches to MT080586 (UNVERIFIED: Staphylococcus phage vB_SauM_EW2, complete genome) position: , mismatch: 7, identity: 0.794

aatagaaggtgataatagcaagcaaaaagaacgt	CRISPR spacer
gaaacaatatgatgatagtaagcaaaaagaacgt	Protospacer
.* * ** .****.****.***************

93. spacer 3.16|37222|34|CP034791|PILER-CR matches to MT080594 (UNVERIFIED: Staphylococcus phage vB_SauM_EW4, complete genome) position: , mismatch: 7, identity: 0.794

aatagaaggtgataatagcaagcaaaaagaacgt	CRISPR spacer
gaaacaatatgatgatagtaagcaaaaagaacgt	Protospacer
.* * ** .****.****.***************

94. spacer 3.16|37222|34|CP034791|PILER-CR matches to MT080582 (UNVERIFIED: Staphylococcus phage vB_SauM_EW1, complete genome) position: , mismatch: 7, identity: 0.794

aatagaaggtgataatagcaagcaaaaagaacgt	CRISPR spacer
gaaacaatatgatgatagtaagcaaaaagaacgt	Protospacer
.* * ** .****.****.***************

95. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MN094788 (Achromobacter phage Motura, complete genome) position: , mismatch: 8, identity: 0.771

--tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
gtccaagtcg--gatgatgacgaagacgaagacgacg	Protospacer
  . *** .*  ***** **.****************

96. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to NC_047815 (Erwinia phage vB_EamM_Yoloswag, complete genome) position: , mismatch: 8, identity: 0.771

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
cgtcgagtctgacgaagaagaagacgaagacgacg	Protospacer
.*  **   ***.***** ****************

97. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to NC_047815 (Erwinia phage vB_EamM_Yoloswag, complete genome) position: , mismatch: 8, identity: 0.771

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
cgactcggacgatgaagacgaagacgaagacgaag	Protospacer
.**    **.********.************** *

98. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MH248138 (Erwinia phage vB_EamM_Alexandra, complete genome) position: , mismatch: 8, identity: 0.771

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agacctcgatgacgaagaggaagacgaagacgatg	Protospacer
 **   .*****.***** **************.*

99. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to NC_019487 (Bacillus phage SP10, complete genome) position: , mismatch: 8, identity: 0.771

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgatgacatcgaagctg	Protospacer
********* *********** ***.  ** * .*

100. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to AB605730 (Bacillus phage SP10 DNA, complete sequence) position: , mismatch: 8, identity: 0.771

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgatgacatcgaagctg	Protospacer
********* *********** ***.  ** * .*

101. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MT478993 (Escherichia phage vB_EcoS_011D5, complete genome) position: , mismatch: 8, identity: 0.771

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
gccacgcgatgacgaagatgaggacgaagacgacg	Protospacer
   * ..*****.********.*************

102. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MT939487 (Erwinia phage pEa_SNUABM_47, complete genome) position: , mismatch: 8, identity: 0.771

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
caacgattatgatgaagacgaagacgaagaaggtg	Protospacer
..* *** **********.*********** *..*

103. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to NC_041917 (Serratia phage BF, complete genome) position: , mismatch: 8, identity: 0.771

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
caacgattatgatgaagacgaagacgaagaaggtg	Protospacer
..* *** **********.*********** *..*

104. spacer 2.9|34407|35|CP034791|PILER-CR matches to MN094788 (Achromobacter phage Motura, complete genome) position: , mismatch: 8, identity: 0.771

--tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
gtccaagtcg--gatgatgacgaagacgaagacgacg	Protospacer
  . *** .*  ***** **.****************

105. spacer 2.9|34407|35|CP034791|PILER-CR matches to NC_047815 (Erwinia phage vB_EamM_Yoloswag, complete genome) position: , mismatch: 8, identity: 0.771

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
cgtcgagtctgacgaagaagaagacgaagacgacg	Protospacer
.*  **   ***.***** ****************

106. spacer 2.9|34407|35|CP034791|PILER-CR matches to NC_047815 (Erwinia phage vB_EamM_Yoloswag, complete genome) position: , mismatch: 8, identity: 0.771

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
cgactcggacgatgaagacgaagacgaagacgaag	Protospacer
.**    **.********.************** *

107. spacer 2.9|34407|35|CP034791|PILER-CR matches to MH248138 (Erwinia phage vB_EamM_Alexandra, complete genome) position: , mismatch: 8, identity: 0.771

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
agacctcgatgacgaagaggaagacgaagacgatg	Protospacer
 **   .*****.***** **************.*

108. spacer 2.9|34407|35|CP034791|PILER-CR matches to NC_019487 (Bacillus phage SP10, complete genome) position: , mismatch: 8, identity: 0.771

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgatgacatcgaagctg	Protospacer
********* *********** ***.  ** * .*

109. spacer 2.9|34407|35|CP034791|PILER-CR matches to AB605730 (Bacillus phage SP10 DNA, complete sequence) position: , mismatch: 8, identity: 0.771

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tgaagatgaagatgaagatgatgacatcgaagctg	Protospacer
********* *********** ***.  ** * .*

110. spacer 2.9|34407|35|CP034791|PILER-CR matches to MT478993 (Escherichia phage vB_EcoS_011D5, complete genome) position: , mismatch: 8, identity: 0.771

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
gccacgcgatgacgaagatgaggacgaagacgacg	Protospacer
   * ..*****.********.*************

111. spacer 2.9|34407|35|CP034791|PILER-CR matches to MT939487 (Erwinia phage pEa_SNUABM_47, complete genome) position: , mismatch: 8, identity: 0.771

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
caacgattatgatgaagacgaagacgaagaaggtg	Protospacer
..* *** **********.*********** *..*

112. spacer 2.9|34407|35|CP034791|PILER-CR matches to NC_041917 (Serratia phage BF, complete genome) position: , mismatch: 8, identity: 0.771

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
caacgattatgatgaagacgaagacgaagaaggtg	Protospacer
..* *** **********.*********** *..*

113. spacer 5.2|48769|36|CP034791|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 8, identity: 0.778

tgaaactgcttttgtttttgaagatgcaaaagttat	CRISPR spacer
ttcaaggccatttgtttttgaagatggaaaatttat	Protospacer
*  **   * **************** **** ****

114. spacer 1.6|11441|36|CP034791|CRISPRCasFinder,CRT matches to NC_018493 (Bacillus cereus FRI-35 plasmid p02, complete sequence) position: , mismatch: 9, identity: 0.75

cattagttaaagaacttttagatgaaaatgaaatat	CRISPR spacer
cacctttgaaagaattcttagatgaaaatgaaatga	Protospacer
**..  * ******.*.*****************.

115. spacer 1.17|11442|36|CP034791|PILER-CR matches to NC_018493 (Bacillus cereus FRI-35 plasmid p02, complete sequence) position: , mismatch: 9, identity: 0.75

cattagttaaagaacttttagatgaaaatgaaatat	CRISPR spacer
cacctttgaaagaattcttagatgaaaatgaaatga	Protospacer
**..  * ******.*.*****************.

116. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MK373789 (Escherichia phage vB_EcoS_PTXU06, complete genome) position: , mismatch: 9, identity: 0.743

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
gtcccgcgatgacgaagatgaggacgaagacgacg	Protospacer
     ..*****.********.*************

117. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MN850575 (Escherichia phage rolling, complete genome) position: , mismatch: 9, identity: 0.743

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
gtcccgcgatgacgaagatgaggacgaagacgacg	Protospacer
     ..*****.********.*************

118. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to MF360958 (Salicola phage SCTP-2, complete genome) position: , mismatch: 9, identity: 0.743

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tctgtctgatgaggaagatgaagacgaagatgatc	Protospacer
*  .  ****** *****************.**.

119. spacer 2.9|34407|35|CP034791|PILER-CR matches to MK373789 (Escherichia phage vB_EcoS_PTXU06, complete genome) position: , mismatch: 9, identity: 0.743

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
gtcccgcgatgacgaagatgaggacgaagacgacg	Protospacer
     ..*****.********.*************

120. spacer 2.9|34407|35|CP034791|PILER-CR matches to MN850575 (Escherichia phage rolling, complete genome) position: , mismatch: 9, identity: 0.743

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
gtcccgcgatgacgaagatgaggacgaagacgacg	Protospacer
     ..*****.********.*************

121. spacer 2.9|34407|35|CP034791|PILER-CR matches to MF360958 (Salicola phage SCTP-2, complete genome) position: , mismatch: 9, identity: 0.743

tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
tctgtctgatgaggaagatgaagacgaagatgatc	Protospacer
*  .  ****** *****************.**.

122. spacer 5.3|48835|36|CP034791|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042394 (Leuconostoc citreum strain CBA3623 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.75

aatgatagaagaatacattatgaaattaaaaaatcc	CRISPR spacer
cgaaatagaaaaataccttatgaaattaaaaaccca	Protospacer
 . .******.***** *************** .*

123. spacer 12.18|2620688|36|CP034791|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031220 (Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence) position: , mismatch: 9, identity: 0.75

gcgatagtatgtagcagtttcaatttcaagttcatc	CRISPR spacer
gattagttttgaagcagtttcaatatcaagttcatc	Protospacer
*    . * ** ************ ***********

124. spacer 2.2|34405|35|CP034791|CRISPRCasFinder,CRT matches to NZ_CP024657 (Bacillus cereus strain MLY1 plasmid pMLY1.1, complete sequence) position: , mismatch: 10, identity: 0.714

------tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
aacaaatgaagatgaagatgaagatgaagaagtaa------	Protospacer
      ********* ************** * *.

125. spacer 2.9|34407|35|CP034791|PILER-CR matches to NZ_CP024657 (Bacillus cereus strain MLY1 plasmid pMLY1.1, complete sequence) position: , mismatch: 10, identity: 0.714

------tgaagatgatgatgaagatgaagacgaagacgacg	CRISPR spacer
aacaaatgaagatgaagatgaagatgaagaagtaa------	Protospacer
      ********* ************** * *.

126. spacer 10.1|110889|36|CP034791|CRISPRCasFinder matches to NZ_CP039286 (Leptospira interrogans strain FMAS_AW1 plasmid pLiSL3, complete sequence) position: , mismatch: 12, identity: 0.667

ttgctctctttttcaaatgtttctgcagtaatatct	CRISPR spacer
gcctgacgtttttcaaatgtttctgcattattatta	Protospacer
 . .  . ******************* ** ***.

127. spacer 10.1|110889|36|CP034791|CRISPRCasFinder matches to NZ_CP039286 (Leptospira interrogans strain FMAS_AW1 plasmid pLiSL3, complete sequence) position: , mismatch: 12, identity: 0.667

ttgctctctttttcaaatgtttctgcagtaatatct	CRISPR spacer
gcctgacgtttttcaaatgtttctgcattattatta	Protospacer
 . .  . ******************* ** ***.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

9151 : 74290

uncultured_virus(40.0%)

transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZT89206.1\|9151_9880_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
AZT89207.1\|9907_10720_+	hypothetical protein	A6M950	Geobacillus_virus	8.8e-05	33.6
AZT89208.1\|12355_12925_+	LemA family protein	NA	NA	NA	NA
AZT89209.1\|12943_13765_+	TPM domain-containing protein	NA	NA	NA	NA
AZT89210.1\|14025_14220_+	DUF2892 domain-containing protein	NA	NA	NA	NA
AZT89211.1\|14383_15700_+	WYL domain-containing protein	NA	NA	NA	NA
AZT89212.1\|15683_16685_+	WYL domain-containing protein	NA	NA	NA	NA
AZT89213.1\|16704_17292_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AZT89214.1\|17276_19976_-	NgoFVII family restriction endonuclease	A0A2H4PJ08	Corynebacterium_phage	5.3e-30	29.0
AZT89215.1\|20243_22571_+	hypothetical protein	NA	NA	NA	NA
AZT89216.1\|22616_22982_+	hypothetical protein	NA	NA	NA	NA
AZT91592.1\|23057_24275_+\|transposase	transposase	W0UUA7	Sulfolobus_monocaudavirus	2.7e-21	28.1
AZT89217.1\|24313_24568_+	hypothetical protein	NA	NA	NA	NA
AZT89218.1\|24674_27722_+	EAL domain-containing protein	NA	NA	NA	NA
AZT89219.1\|27928_28324_+	hypothetical protein	NA	NA	NA	NA
AZT89220.1\|28415_28676_-	stage V sporulation protein S	NA	NA	NA	NA
AZT91593.1\|28868_29567_+	hypothetical protein	NA	NA	NA	NA
AZT89221.1\|29609_30119_+	hypothetical protein	NA	NA	NA	NA
AZT89222.1\|30213_31029_+	hypothetical protein	NA	NA	NA	NA
AZT89223.1\|31657_32644_-	ATP-dependent helicase	NA	NA	NA	NA
AZT89224.1\|33537_33930_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
AZT89225.1\|33913_34165_-	hypothetical protein	NA	NA	NA	NA
AZT89226.1\|35259_36651_+	ATP-binding protein	NA	NA	NA	NA
AZT89227.1\|37998_40446_+	type III-A CRISPR-associated protein Cas10/Csm1	NA	NA	NA	NA
AZT89228.1\|40454_41075_+	type III-A CRISPR-associated protein Csm2	NA	NA	NA	NA
AZT91594.1\|41123_41825_+	type III-A CRISPR-associated RAMP protein Csm3	NA	NA	NA	NA
AZT89229.1\|41852_42788_+	hypothetical protein	NA	NA	NA	NA
AZT89230.1\|42784_43987_+	hypothetical protein	NA	NA	NA	NA
AZT89231.1\|43990_44728_+	CRISPR-associated endoribonuclease Cas6	NA	NA	NA	NA
AZT89232.1\|44782_45694_+	TIGR02221 family CRISPR-associated protein	NA	NA	NA	NA
AZT89233.1\|45693_46173_+	hypothetical protein	NA	NA	NA	NA
AZT89234.1\|47377_47632_-	hypothetical protein	NA	NA	NA	NA
AZT91595.1\|47628_48588_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
AZT89235.1\|49973_50924_+	hypothetical protein	NA	NA	NA	NA
AZT91596.1\|50928_52026_+	DUF1848 domain-containing protein	NA	NA	NA	NA
AZT89236.1\|54169_55456_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AZT89237.1\|56041_57460_+	TIGR01897 family CRISPR-associated protein	NA	NA	NA	NA
AZT89238.1\|58489_59719_-\|transposase	IS256-like element ISCsa2 family transposase	A0A218MNI5	uncultured_virus	1.3e-12	31.4
AZT89239.1\|59753_60479_-	hypothetical protein	NA	NA	NA	NA
AZT89240.1\|62913_64299_+	ATP-binding protein	NA	NA	NA	NA
AZT91597.1\|64762_65002_+	hypothetical protein	NA	NA	NA	NA
AZT89241.1\|65033_65384_+	hypothetical protein	NA	NA	NA	NA
AZT89242.1\|65498_67982_+	type III-A CRISPR-associated protein Cas10/Csm1	NA	NA	NA	NA
AZT89243.1\|68013_68424_+	type III-A CRISPR-associated protein Csm2	NA	NA	NA	NA
AZT89244.1\|68451_69264_+	type III-A CRISPR-associated RAMP protein Csm3	NA	NA	NA	NA
AZT89245.1\|69307_70318_+	type III-A CRISPR-associated RAMP protein Csm4	NA	NA	NA	NA
AZT89246.1\|70307_71474_+	type III-A CRISPR-associated RAMP protein Csm5	NA	NA	NA	NA
AZT89247.1\|71470_72094_+	hypothetical protein	NA	NA	NA	NA
AZT89248.1\|72410_72644_-	hypothetical protein	NA	NA	NA	NA
AZT89249.1\|73060_74290_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	3.2e-14	32.7

DBSCAN-SWA_2

506299 : 515724

Erysipelothrix_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZT89586.1\|506299_506791_+	recombinase	A0A2K5B2B3	Erysipelothrix_phage	1.4e-21	42.3
AZT89587.1\|506753_508322_+	recombinase family protein	A0A2K5B2B4	Erysipelothrix_phage	4.6e-167	56.9
AZT89588.1\|508719_509094_+	transcriptional regulator	E4ZFI8	Streptococcus_phage	6.7e-16	41.1
AZT89589.1\|509107_511480_+	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.9e-116	35.9
AZT89590.1\|511566_512031_+	signal peptidase II	NA	NA	NA	NA
AZT89591.1\|512524_513757_+\|transposase	transposase	NA	NA	NA	NA
AZT89592.1\|513852_514335_+	methylated-DNA--[protein]-cysteine S-methyltransferase	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	1.1e-23	42.8
AZT89593.1\|514365_515724_-	beta-glucosidase	A0A0B5JD41	Pandoravirus	1.5e-60	32.5

DBSCAN-SWA_3

1264817 : 1276956

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZT90253.1\|1264817_1265489_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.2e-55	46.8
AZT90254.1\|1265514_1266918_+	HAMP domain-containing protein	W8CYF6	Bacillus_phage	5.4e-42	38.9
AZT90255.1\|1267012_1268236_+	PDZ domain-containing protein	W5SAB9	Pithovirus	2.3e-09	30.7
AZT90256.1\|1268459_1269848_+	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	1.4e-55	32.5
AZT90257.1\|1269973_1270684_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	G8EYA2	Synechococcus_phage	5.1e-41	40.8
AZT90258.1\|1270722_1270971_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
AZT90259.1\|1270974_1271670_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
AZT90260.1\|1271676_1273869_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	8.4e-159	41.7
AZT90261.1\|1273850_1275275_+	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	1.8e-61	34.3
AZT90262.1\|1275277_1276303_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	2.8e-64	39.9
AZT90263.1\|1276299_1276956_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	8.1e-17	32.3

DBSCAN-SWA_4

1333828 : 1384061

Staphylococcus_phage(18.18%)

transposase,bacteriocin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZT90313.1\|1333828_1334020_+\|bacteriocin	bacteriocin-type signal sequence	NA	NA	NA	NA
AZT90314.1\|1334155_1334893_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AZT90315.1\|1335168_1336341_+	hypothetical protein	NA	NA	NA	NA
AZT90316.1\|1336389_1337337_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.0e-28	36.7
AZT91643.1\|1337463_1337649_+	hypothetical protein	NA	NA	NA	NA
AZT90317.1\|1337683_1337905_+	hypothetical protein	NA	NA	NA	NA
AZT90318.1\|1338012_1338798_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AZT90319.1\|1339151_1339481_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
AZT90320.1\|1339491_1340478_-	tyrosine recombinase XerC	A0A2R2ZHE2	Clostridioides_phage	3.0e-15	26.2
AZT90321.1\|1340609_1341155_-	hypothetical protein	NA	NA	NA	NA
AZT90322.1\|1341349_1342519_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZT90323.1\|1342617_1343502_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZT90324.1\|1343508_1344444_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZT90325.1\|1344445_1345216_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.7e-16	26.0
AZT90326.1\|1345208_1345913_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.0e-17	28.0
AZT91644.1\|1346032_1346443_-	hypothetical protein	NA	NA	NA	NA
AZT90327.1\|1346588_1347527_-\|transposase	transposase	NA	NA	NA	NA
AZT90328.1\|1347803_1348379_-	orotate phosphoribosyltransferase	NA	NA	NA	NA
AZT90329.1\|1348371_1349100_-	histidine phosphatase family protein	NA	NA	NA	NA
AZT90330.1\|1349112_1350012_-	dihydroorotate dehydrogenase	NA	NA	NA	NA
AZT90331.1\|1350012_1350777_-	dihydroorotate dehydrogenase electron transfer subunit	NA	NA	NA	NA
AZT90332.1\|1350757_1353988_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
AZT90333.1\|1354021_1354939_-	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA
AZT90334.1\|1354932_1356225_-	dihydroorotase	NA	NA	NA	NA
AZT90335.1\|1356228_1357140_-	aspartate carbamoyltransferase catalytic subunit	A7RB08	Paramecium_bursaria_Chlorella_virus	8.6e-33	35.5
AZT90336.1\|1357193_1358579_-	uracil permease	Q9KX94	Enterobacteria_phage	1.5e-76	40.9
AZT90337.1\|1358607_1359156_-	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA
AZT91645.1\|1359385_1360288_-	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	5.0e-09	32.4
AZT90338.1\|1360284_1360743_-	signal peptidase II	NA	NA	NA	NA
AZT90339.1\|1360830_1361466_-	conjugal transfer protein TraR	NA	NA	NA	NA
AZT91646.1\|1361499_1361778_-	hypothetical protein	NA	NA	NA	NA
AZT90340.1\|1361876_1362650_+	S-methyl-5'-thioadenosine phosphorylase	NA	NA	NA	NA
AZT90341.1\|1362657_1363686_+	S-methyl-5-thioribose-1-phosphate isomerase	NA	NA	NA	NA
AZT90342.1\|1363876_1364503_+	hypothetical protein	NA	NA	NA	NA
AZT90343.1\|1364831_1366037_-	hypothetical protein	NA	NA	NA	NA
AZT90344.1\|1366073_1366763_-	hypothetical protein	NA	NA	NA	NA
AZT90345.1\|1366722_1367802_-	hypothetical protein	NA	NA	NA	NA
AZT90346.1\|1368172_1368805_-	hypothetical protein	NA	NA	NA	NA
AZT90347.1\|1368955_1370119_-	hypothetical protein	NA	NA	NA	NA
AZT90348.1\|1370279_1371839_-	peptidase M56	NA	NA	NA	NA
AZT90349.1\|1371846_1372227_-	BlaI/MecI/CopY family transcriptional regulator	A0A090DCS9	Clostridium_phage	1.5e-07	31.9
AZT90350.1\|1372471_1374244_-	S-layer homology domain-containing protein	NA	NA	NA	NA
AZT90351.1\|1375453_1377013_-	peptidase M56	NA	NA	NA	NA
AZT90352.1\|1377020_1377401_-	BlaI/MecI/CopY family transcriptional regulator	A0A090DCS9	Clostridium_phage	5.8e-07	31.0
AZT90353.1\|1377882_1378392_+	hypothetical protein	NA	NA	NA	NA
AZT90354.1\|1378901_1379675_-	AAA family ATPase	U5N3V8	Enterobacteria_phage	9.5e-49	40.9
AZT91647.1\|1379671_1381150_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	2.8e-25	29.5
AZT90355.1\|1381484_1381955_+	hypothetical protein	NA	NA	NA	NA
AZT90356.1\|1381973_1383011_+	hypothetical protein	NA	NA	NA	NA
AZT90357.1\|1383116_1384061_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_5

2153787 : 2211432

Bacillus_phage(25.0%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZT91036.1\|2153787_2155089_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.4e-148	63.1
AZT91037.1\|2155115_2155703_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	2.0e-54	55.9
AZT91038.1\|2155745_2157062_-	trigger factor	NA	NA	NA	NA
AZT91039.1\|2157329_2158814_+	fucose isomerase	NA	NA	NA	NA
AZT91040.1\|2158884_2160165_-	L-rhamnose isomerase	NA	NA	NA	NA
AZT91041.1\|2160190_2160961_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
AZT91042.1\|2160997_2163469_-	dehydrogenase	NA	NA	NA	NA
AZT91043.1\|2163498_2164863_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.0e-41	26.6
AZT91044.1\|2164902_2166288_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA
AZT91045.1\|2167306_2168014_-	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA
AZT91046.1\|2168051_2169317_-	L-sorbose 1-phosphate reductase	NA	NA	NA	NA
AZT91047.1\|2169522_2170302_+	sorbitol-6-phosphate dehydrogenase	W8CYX9	Bacillus_phage	5.1e-10	47.9
AZT91689.1\|2170329_2171631_+	PHP domain-containing protein	NA	NA	NA	NA
AZT91048.1\|2171693_2172743_-	class II aldolase	A0A222YW27	Synechococcus_phage	2.7e-06	27.2
AZT91049.1\|2172768_2174055_-	class II aldolase/adducin family protein	NA	NA	NA	NA
AZT91050.1\|2174640_2175927_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AZT91051.1\|2178508_2181235_-	UPF0182 family protein	NA	NA	NA	NA
AZT91052.1\|2181263_2181626_-	YlbF family regulator	NA	NA	NA	NA
AZT91053.1\|2181671_2182607_-	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA
AZT91054.1\|2182648_2183080_-	NfeD family protein	NA	NA	NA	NA
AZT91055.1\|2183092_2185492_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	7.4e-84	34.4
AZT91056.1\|2185546_2186131_-	hypothetical protein	NA	NA	NA	NA
AZT91057.1\|2186267_2186672_-	TIGR04086 family membrane protein	NA	NA	NA	NA
AZT91058.1\|2186754_2187945_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	6.6e-150	70.0
AZT91059.1\|2190053_2190470_-	YjbQ family protein	NA	NA	NA	NA
AZT91060.1\|2190613_2191564_+	glycosidase	NA	NA	NA	NA
AZT91061.1\|2191645_2191906_-	hypothetical protein	NA	NA	NA	NA
AZT91062.1\|2191933_2192284_-	hypothetical protein	NA	NA	NA	NA
AZT91063.1\|2195039_2196326_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AZT91064.1\|2198317_2198998_-	hypothetical protein	NA	NA	NA	NA
AZT91065.1\|2198990_2199647_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.4e-32	34.4
AZT91066.1\|2199669_2199948_-	hypothetical protein	NA	NA	NA	NA
AZT91067.1\|2200448_2201207_-	hypothetical protein	NA	NA	NA	NA
AZT91068.1\|2201206_2202040_-	hypothetical protein	NA	NA	NA	NA
AZT91069.1\|2202779_2204066_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AZT91070.1\|2208449_2209037_-	hypothetical protein	NA	NA	NA	NA
AZT91690.1\|2209056_2209650_-	hypothetical protein	NA	NA	NA	NA
AZT91071.1\|2210487_2211432_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_6

2819774 : 2862774

Enterobacteria_phage(18.18%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZT91525.1\|2819774_2820725_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AZT91723.1\|2820796_2821507_-	hypothetical protein	NA	NA	NA	NA
AZT91526.1\|2821899_2822481_-	hypothetical protein	NA	NA	NA	NA
AZT91724.1\|2822920_2823157_-	hypothetical protein	NA	NA	NA	NA
AZT91527.1\|2823292_2823586_-	hypothetical protein	NA	NA	NA	NA
AZT91528.1\|2823647_2824565_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AZT91529.1\|2824604_2825588_-	hypothetical protein	NA	NA	NA	NA
AZT91530.1\|2825689_2826328_-	hypothetical protein	NA	NA	NA	NA
AZT91531.1\|2826732_2827284_+	macro domain-containing protein	A0A2K9L8X2	Tupanvirus	1.6e-18	33.3
AZT91532.1\|2829079_2830018_+\|transposase	transposase	NA	NA	NA	NA
AZT91533.1\|2830149_2830626_-	hypothetical protein	NA	NA	NA	NA
AZT91534.1\|2831001_2832363_-	sugar transferase	NA	NA	NA	NA
AZT91535.1\|2832359_2833283_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
AZT91725.1\|2833794_2834853_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	4.6e-78	47.3
AZT91536.1\|2834870_2835713_-	dTDP-4-dehydrorhamnose reductase	A0A1D7XFA3	Escherichia_phage	4.8e-30	35.6
AZT91537.1\|2835709_2836291_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	4.6e-48	52.5
AZT91538.1\|2836291_2837161_-	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	7.3e-90	54.9
AZT91539.1\|2837238_2837895_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AZT91540.1\|2839007_2839946_-\|transposase	transposase	NA	NA	NA	NA
AZT91541.1\|2840317_2841454_-	glycosyltransferase	NA	NA	NA	NA
AZT91542.1\|2841539_2842850_-	hypothetical protein	NA	NA	NA	NA
AZT91726.1\|2842906_2843128_-	hypothetical protein	NA	NA	NA	NA
AZT91543.1\|2843321_2844431_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
AZT91544.1\|2844813_2847000_-	polymerase	NA	NA	NA	NA
AZT91545.1\|2847056_2847689_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
AZT91546.1\|2847814_2848441_+	stage II sporulation protein M	NA	NA	NA	NA
AZT91547.1\|2848913_2849291_+	hypothetical protein	NA	NA	NA	NA
AZT91727.1\|2849251_2849677_+	DUF3800 domain-containing protein	NA	NA	NA	NA
AZT91548.1\|2849955_2851752_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.1e-63	33.3
AZT91549.1\|2851822_2853565_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.8e-61	31.5
AZT91550.1\|2853736_2855020_-	adenylosuccinate synthase	A0A160ER07	Powai_lake_megavirus	1.8e-68	37.5
AZT91551.1\|2855194_2855842_+	energy-coupled thiamine transporter ThiT	NA	NA	NA	NA
AZT91552.1\|2855951_2856482_-	hypothetical protein	NA	NA	NA	NA
AZT91553.1\|2856517_2857465_-	hypothetical protein	NA	NA	NA	NA
AZT91554.1\|2859654_2860230_-	Uma2 family endonuclease	NA	NA	NA	NA
AZT91555.1\|2860254_2860788_-	DEAD/DEAH box helicase	A0A0U1VTD3	Pseudomonas_phage	1.3e-12	29.6
AZT91556.1\|2860985_2862182_-\|transposase	transposase	G3MB42	Bacillus_virus	1.0e-113	52.4
AZT91557.1\|2862138_2862774_-\|transposase	IS607 family transposase	A0A2H4UUJ6	Bodo_saltans_virus	2.6e-36	43.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP034791

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection