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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP031338 Microbacterium oxydans strain VIU2A chromosome, complete genome 1 crisprs csa3,WYL,DEDDh,cas3 1 1 2 0

Results visualization

1. CP031338
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP031338_4 3160408-3160502 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CP031338_1 1.3|1586360|19|CP031338|CRISPRCasFinder 1586360-1586378 19 CP031338.1 3061654-3061672 2 0.895

1. spacer 1.3|1586360|19|CP031338|CRISPRCasFinder matches to position: 3061654-3061672, mismatch: 2, identity: 0.895

cgccgccaagaaggctccg	CRISPR spacer
cgccgtcgagaaggctccg	Protospacer
*****.*.***********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP031338_1 1.3|1586360|19|CP031338|CRISPRCasFinder 1586360-1586378 19 MK279853 Gordonia phage Gray, complete genome 81716-81734 0 1.0
CP031338_1 1.3|1586360|19|CP031338|CRISPRCasFinder 1586360-1586378 19 MN586022 Gordonia phage Chidiebere, complete genome 82386-82404 0 1.0
CP031338_1 1.3|1586360|19|CP031338|CRISPRCasFinder 1586360-1586378 19 NZ_CP050098 Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence 202941-202959 0 1.0
CP031338_1 1.3|1586360|19|CP031338|CRISPRCasFinder 1586360-1586378 19 MT657343 Microbacterium phage GaeCeo, complete genome 29491-29509 0 1.0
CP031338_1 1.3|1586360|19|CP031338|CRISPRCasFinder 1586360-1586378 19 MN310543 Microbacterium phage ChickenKing, complete genome 29258-29276 0 1.0

1. spacer 1.3|1586360|19|CP031338|CRISPRCasFinder matches to MK279853 (Gordonia phage Gray, complete genome) position: , mismatch: 0, identity: 1.0

cgccgccaagaaggctccg	CRISPR spacer
cgccgccaagaaggctccg	Protospacer
*******************

2. spacer 1.3|1586360|19|CP031338|CRISPRCasFinder matches to MN586022 (Gordonia phage Chidiebere, complete genome) position: , mismatch: 0, identity: 1.0

cgccgccaagaaggctccg	CRISPR spacer
cgccgccaagaaggctccg	Protospacer
*******************

3. spacer 1.3|1586360|19|CP031338|CRISPRCasFinder matches to NZ_CP050098 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence) position: , mismatch: 0, identity: 1.0

cgccgccaagaaggctccg	CRISPR spacer
cgccgccaagaaggctccg	Protospacer
*******************

4. spacer 1.3|1586360|19|CP031338|CRISPRCasFinder matches to MT657343 (Microbacterium phage GaeCeo, complete genome) position: , mismatch: 0, identity: 1.0

cgccgccaagaaggctccg	CRISPR spacer
cgccgccaagaaggctccg	Protospacer
*******************

5. spacer 1.3|1586360|19|CP031338|CRISPRCasFinder matches to MN310543 (Microbacterium phage ChickenKing, complete genome) position: , mismatch: 0, identity: 1.0

cgccgccaagaaggctccg	CRISPR spacer
cgccgccaagaaggctccg	Protospacer
*******************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1336798 : 1346437 15 Microbacterium_phage(33.33%) NA NA
DBSCAN-SWA_2 1355666 : 1371670 18 Rathayibacter_phage(42.86%) protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage