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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP018036 Bordetella pertussis strain I094 chromosome, complete genome 4 crisprs csa3,cas3,DinG,DEDDh 0 0 24 0

Results visualization

1. CP018036
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP018036_1 251626-251710 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP018036_2 433062-433155 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP018036_3 997366-997460 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP018036_4 3436507-3436616 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 65102 57 Natrialba_phage(12.5%) transposase,protease,tRNA NA
DBSCAN-SWA_2 70213 : 123119 52 Planktothrix_phage(20.0%) transposase,tRNA NA
DBSCAN-SWA_3 165936 : 304055 116 Klosneuvirus(10.53%) transposase,protease,tRNA NA
DBSCAN-SWA_4 391888 : 449394 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_5 637813 : 737924 106 uncultured_Caudovirales_phage(13.79%) tail,terminase,transposase,tRNA NA
DBSCAN-SWA_6 860810 : 914939 43 Vibrio_phage(25.0%) transposase,holin NA
DBSCAN-SWA_7 953847 : 1027308 59 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_8 1048340 : 1099001 42 uncultured_Mediterranean_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_9 1382370 : 1448869 57 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_10 1491146 : 1616112 112 Planktothrix_phage(19.05%) transposase,protease,tRNA NA
DBSCAN-SWA_11 1657050 : 1728122 55 Ectocarpus_siliculosus_virus(11.11%) transposase NA
DBSCAN-SWA_12 2201706 : 2267256 60 Lake_Baikal_phage(21.43%) transposase,protease,tRNA NA
DBSCAN-SWA_13 2688976 : 2734621 44 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_14 2755786 : 2816852 47 Bacillus_virus(20.0%) transposase,tRNA NA
DBSCAN-SWA_15 2840858 : 2906689 48 Pelagibacter_phage(16.67%) transposase,protease NA
DBSCAN-SWA_16 2912919 : 2972253 54 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_17 2989247 : 3052339 56 Bacillus_virus(28.57%) transposase,tRNA NA
DBSCAN-SWA_18 3125622 : 3189454 56 Pseudomonas_phage(30.0%) transposase,protease,tRNA NA
DBSCAN-SWA_19 3237593 : 3273477 37 Erwinia_phage(20.0%) transposase NA
DBSCAN-SWA_20 3280063 : 3336126 41 Sinorhizobium_phage(16.67%) integrase,transposase,protease,tRNA attL 3318973:3318991|attR 3338861:3338879
DBSCAN-SWA_21 3385142 : 3505221 103 Acinetobacter_phage(18.75%) transposase,tRNA NA
DBSCAN-SWA_22 3520240 : 3578309 49 Catovirus(12.5%) holin,transposase,tRNA NA
DBSCAN-SWA_23 3709463 : 3752600 40 Streptococcus_phage(11.11%) integrase,transposase,tRNA attL 3747439:3747457|attR 3753223:3753241
DBSCAN-SWA_24 3758568 : 3792223 34 Burkholderia_phage(11.11%) integrase,transposase attL 3755074:3755091|attR 3800762:3800779
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage