Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025344 Bordetella pertussis strain J077 chromosome, complete genome 4 crisprs csa3,cas3,DinG,DEDDh 0 0 27 0

Results visualization

1. CP025344
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025344_1 250584-250668 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025344_2 432026-432119 Orphan NA
1 spacers
DEDDh

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025344_3 996341-996435 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025344_4 3433499-3433608 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 79600 47 Synechococcus_phage(25.0%) tRNA,transposase,protease NA
DBSCAN-SWA_2 107423 : 175247 58 Bacillus_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 215658 : 266517 40 uncultured_Caudovirales_phage(33.33%) tRNA,transposase,protease NA
DBSCAN-SWA_4 277133 : 331327 53 Pithovirus(14.29%) transposase,protease NA
DBSCAN-SWA_5 390849 : 448358 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 636782 : 736894 108 uncultured_Caudovirales_phage(13.33%) terminase,tRNA,tail,transposase NA
DBSCAN-SWA_7 748181 : 821343 58 Streptococcus_phage(16.67%) transposase NA
DBSCAN-SWA_8 854090 : 903354 40 Vibrio_phage(33.33%) transposase,holin NA
DBSCAN-SWA_9 934664 : 1000564 60 Bacillus_virus(15.38%) transposase NA
DBSCAN-SWA_10 1036925 : 1082452 42 uncultured_Mediterranean_phage(37.5%) tRNA,transposase NA
DBSCAN-SWA_11 1086498 : 1158519 56 Planktothrix_phage(18.18%) tRNA,holin,transposase NA
DBSCAN-SWA_12 1176305 : 1236188 46 Bacillus_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_13 1292698 : 1330512 37 Salmonella_phage(50.0%) transposase NA
DBSCAN-SWA_14 1419153 : 1483367 60 Salmonella_phage(16.67%) tRNA,transposase,protease NA
DBSCAN-SWA_15 1713099 : 1747711 33 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_16 2217131 : 2278479 52 Yellowstone_lake_phycodnavirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_17 2360249 : 2426576 57 Ectocarpus_siliculosus_virus(10.0%) transposase NA
DBSCAN-SWA_18 2454621 : 2512805 54 Planktothrix_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_19 2578610 : 2645110 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_20 2673225 : 2710636 39 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_21 2809762 : 2873254 56 Diachasmimorpha_longicaudata_entomopoxvirus(20.0%) transposase NA
DBSCAN-SWA_22 2896675 : 2960422 54 uncultured_Mediterranean_phage(25.0%) transposase,protease NA
DBSCAN-SWA_23 2969181 : 3013702 44 Bacillus_virus(20.0%) transposase NA
DBSCAN-SWA_24 3236674 : 3271512 36 Erwinia_phage(20.0%) transposase,holin NA
DBSCAN-SWA_25 3283340 : 3334217 38 Planktothrix_phage(33.33%) integrase,tRNA,transposase,protease attL 3317014:3317032|attR 3336901:3336919
DBSCAN-SWA_26 3402964 : 3466795 49 Staphylococcus_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_27 3471209 : 3591576 102 Acinetobacter_phage(22.22%) tRNA,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage