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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025348 Bordetella pertussis strain J234 chromosome, complete genome 4 crisprs csa3,cas3,DinG,DEDDh 0 0 28 0

Results visualization

1. CP025348
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025348_1 250589-250673 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025348_2 433081-433174 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025348_3 999502-999596 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025348_4 3432492-3432601 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 70443 60 Natrialba_phage(12.5%) protease,transposase,tRNA NA
DBSCAN-SWA_2 77633 : 136107 54 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164892 : 225403 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,transposase,tRNA NA
DBSCAN-SWA_4 233334 : 287971 49 Bacillus_phage(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_5 391904 : 449413 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 621849 : 723362 111 Bacillus_phage(10.71%) tail,transposase,terminase,tRNA NA
DBSCAN-SWA_7 738049 : 766367 24 Planktothrix_phage(100.0%) transposase NA
DBSCAN-SWA_8 857245 : 906509 40 Vibrio_phage(33.33%) transposase,holin NA
DBSCAN-SWA_9 916121 : 981061 60 Bacillus_phage(18.18%) transposase NA
DBSCAN-SWA_10 1000466 : 1063617 53 Enterococcus_phage(16.67%) transposase NA
DBSCAN-SWA_11 1069601 : 1137763 54 uncultured_Mediterranean_phage(25.0%) transposase,holin,tRNA NA
DBSCAN-SWA_12 1320052 : 1388539 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_13 1449030 : 1504518 56 Mollivirus(16.67%) protease,transposase NA
DBSCAN-SWA_14 1543841 : 1601923 60 Planktothrix_phage(15.38%) protease,transposase,tRNA NA
DBSCAN-SWA_15 1657127 : 1728281 54 Ectocarpus_siliculosus_virus(10.0%) transposase NA
DBSCAN-SWA_16 1749072 : 1810420 52 uncultured_Caudovirales_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_17 2200777 : 2256013 50 Lake_Baikal_phage(25.0%) protease,transposase NA
DBSCAN-SWA_18 2259120 : 2313390 49 Klosneuvirus(14.29%) transposase,tRNA NA
DBSCAN-SWA_19 2352503 : 2416081 49 uncultured_Caudovirales_phage(11.11%) protease,transposase NA
DBSCAN-SWA_20 2688067 : 2728735 44 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_21 2784199 : 2857069 59 Moraxella_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_22 2860212 : 2927023 49 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_23 2957409 : 2996598 38 Planktothrix_phage(50.0%) transposase NA
DBSCAN-SWA_24 3185518 : 3246547 49 Xanthomonas_phage(50.0%) transposase NA
DBSCAN-SWA_25 3268272 : 3306687 36 Tupanvirus(16.67%) transposase,holin NA
DBSCAN-SWA_26 3382094 : 3435835 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_27 3441990 : 3501290 48 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_28 3516228 : 3574301 47 Planktothrix_phage(12.5%) transposase,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage