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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025372 Bordetella pertussis strain I372 chromosome, complete genome 5 crisprs DEDDh,cas3,csa3,DinG 0 0 27 0

Results visualization

1. CP025372
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025372_1 250593-250677 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025372_2 622952-623061 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025372_3 2120776-2120903 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025372_4 2905854-2905970 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025372_5 3621675-3621768 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 122073 110 Planktothrix_phage(16.67%) protease,tRNA,transposase NA
DBSCAN-SWA_2 164895 : 225406 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,tRNA,transposase NA
DBSCAN-SWA_3 233338 : 286926 48 Bacillus_phage(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_4 466029 : 585349 101 Acinetobacter_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_5 589763 : 654645 51 Pandoravirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_6 673556 : 750865 59 Bacillus_phage(20.0%) protease,tRNA,integrase,transposase attL 720693:720711|attR 740581:740599
DBSCAN-SWA_7 1005156 : 1099193 88 Bacillus_virus(27.27%) transposase NA
DBSCAN-SWA_8 1129579 : 1199500 51 uncultured_Mediterranean_phage(25.0%) protease,transposase NA
DBSCAN-SWA_9 1246894 : 1323756 58 Bacillus_virus(25.0%) tRNA,transposase NA
DBSCAN-SWA_10 1327867 : 1368535 44 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_11 1448212 : 1501392 46 Salmonella_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_12 1543241 : 1602104 53 Streptococcus_virus(11.11%) protease,tRNA,transposase NA
DBSCAN-SWA_13 1647276 : 1702816 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_14 2022985 : 2071000 44 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_15 2074393 : 2135598 53 Lake_Baikal_phage(21.43%) protease,tRNA,transposase NA
DBSCAN-SWA_16 2163381 : 2204072 36 Klosneuvirus(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_17 2215276 : 2265721 45 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_18 2277217 : 2341585 52 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_19 2506046 : 2564290 53 Planktothrix_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_20 2606570 : 2673070 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_21 2875483 : 2956760 59 Planktothrix_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_22 2965828 : 3015815 45 uncultured_Mediterranean_phage(37.5%) holin,tRNA,transposase NA
DBSCAN-SWA_23 3027422 : 3099916 59 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_24 3113423 : 3166941 46 Bacillus_phage(33.33%) holin,transposase NA
DBSCAN-SWA_25 3231399 : 3301451 56 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_26 3316897 : 3417010 109 uncultured_Caudovirales_phage(13.79%) tRNA,terminase,transposase,tail NA
DBSCAN-SWA_27 4005814 : 4070726 58 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage