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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025379 Bordetella pertussis strain I188 chromosome, complete genome 4 crisprs csa3,cas3,DinG,DEDDh 0 0 29 0

Results visualization

1. CP025379
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025379_1 251640-251724 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025379_2 433083-433176 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025379_3 999474-999568 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025379_4 3429276-3429385 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 122073 110 Planktothrix_phage(16.67%) transposase,protease,tRNA NA
DBSCAN-SWA_2 164893 : 225404 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) transposase,protease,tRNA NA
DBSCAN-SWA_3 233336 : 287973 49 Bacillus_phage(25.0%) transposase,protease,tRNA NA
DBSCAN-SWA_4 391906 : 449415 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_5 622887 : 723351 111 uncultured_Caudovirales_phage(13.79%) terminase,transposase,tail,tRNA NA
DBSCAN-SWA_6 738038 : 796069 45 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_7 857222 : 906486 40 Vibrio_phage(33.33%) transposase,holin NA
DBSCAN-SWA_8 916098 : 981038 60 Bacillus_phage(18.18%) transposase NA
DBSCAN-SWA_9 1000438 : 1063589 53 Enterococcus_phage(16.67%) transposase NA
DBSCAN-SWA_10 1069573 : 1137735 55 uncultured_Mediterranean_phage(25.0%) transposase,holin,tRNA NA
DBSCAN-SWA_11 1318916 : 1384345 55 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_12 1448943 : 1504431 56 Mollivirus(16.67%) transposase,protease NA
DBSCAN-SWA_13 1543754 : 1601836 60 Planktothrix_phage(15.38%) transposase,protease,tRNA NA
DBSCAN-SWA_14 1657036 : 1728190 54 Ectocarpus_siliculosus_virus(10.0%) transposase NA
DBSCAN-SWA_15 1748981 : 1810329 52 uncultured_Caudovirales_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_16 1991514 : 2061166 56 Staphylococcus_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_17 2072662 : 2122058 44 Erysipelothrix_phage(16.67%) transposase NA
DBSCAN-SWA_18 2133262 : 2266257 113 Klosneuvirus(12.5%) transposase,protease,tRNA NA
DBSCAN-SWA_19 2542007 : 2606223 60 Salmonella_phage(16.67%) transposase,protease,tRNA NA
DBSCAN-SWA_20 2685900 : 2726568 44 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_21 2782033 : 2854903 59 Moraxella_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_22 2858046 : 2924857 49 uncultured_Mediterranean_phage(28.57%) transposase,protease NA
DBSCAN-SWA_23 2955243 : 2994432 38 Planktothrix_phage(50.0%) transposase NA
DBSCAN-SWA_24 3232445 : 3267283 36 Erwinia_phage(20.0%) transposase,holin NA
DBSCAN-SWA_25 3279112 : 3329991 40 Planktothrix_phage(33.33%) transposase,protease,tRNA,integrase attL 3312787:3312805|attR 3332675:3332693
DBSCAN-SWA_26 3378878 : 3432619 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_27 3438774 : 3498074 48 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_28 3513012 : 3571085 47 Planktothrix_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_29 3998941 : 4063853 58 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage