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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025380 Bordetella pertussis strain I598 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 29 0

Results visualization

1. CP025380
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025380_1 250590-250674 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025380_2 432033-432126 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025380_3 995300-995394 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025380_4 1892007-1892134 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025380_5 3431718-3431827 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 122073 110 Planktothrix_phage(16.67%) tRNA,protease,transposase NA
DBSCAN-SWA_2 164891 : 225402 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) tRNA,protease,transposase NA
DBSCAN-SWA_3 233335 : 286923 48 Bacillus_phage(25.0%) tRNA,protease,transposase NA
DBSCAN-SWA_4 390856 : 448365 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_5 619751 : 720215 111 uncultured_Caudovirales_phage(13.79%) tRNA,tail,transposase,terminase NA
DBSCAN-SWA_6 853048 : 902312 40 Vibrio_phage(33.33%) holin,transposase NA
DBSCAN-SWA_7 911924 : 976864 60 Bacillus_phage(18.18%) transposase NA
DBSCAN-SWA_8 996264 : 1047229 41 Enterococcus_phage(25.0%) transposase NA
DBSCAN-SWA_9 1059447 : 1117110 47 uncultured_Mediterranean_phage(37.5%) tRNA,holin,transposase NA
DBSCAN-SWA_10 1317181 : 1385668 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_11 1446159 : 1501647 56 Mollivirus(16.67%) protease,transposase NA
DBSCAN-SWA_12 1794216 : 1842231 44 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_13 1845624 : 1907878 54 Lake_Baikal_phage(21.43%) tRNA,protease,transposase NA
DBSCAN-SWA_14 1923917 : 1977401 46 Klosneuvirus(22.22%) tRNA,protease,transposase NA
DBSCAN-SWA_15 1988605 : 2038001 44 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_16 2049497 : 2113866 52 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_17 2300334 : 2361682 52 Yellowstone_lake_phycodnavirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_18 2382473 : 2453627 54 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_19 2494567 : 2556414 60 Planktothrix_phage(14.29%) protease,transposase,tRNA NA
DBSCAN-SWA_20 2686244 : 2731974 46 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_21 2782377 : 2856295 60 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_22 2859438 : 2926249 49 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_23 2956635 : 2995824 38 Planktothrix_phage(50.0%) transposase NA
DBSCAN-SWA_24 3184744 : 3245773 49 Xanthomonas_phage(50.0%) transposase NA
DBSCAN-SWA_25 3267498 : 3305913 36 Tupanvirus(16.67%) holin,transposase NA
DBSCAN-SWA_26 3381320 : 3435061 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_27 3441216 : 3500516 48 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_28 3515454 : 3574576 48 Planktothrix_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_29 4006789 : 4071701 58 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage