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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025386 Bordetella pertussis strain I623 chromosome, complete genome 4 crisprs csa3,cas3,DinG,DEDDh 0 0 26 0

Results visualization

1. CP025386
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025386_1 250585-250669 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025386_2 433075-433168 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025386_3 997396-997490 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025386_4 3430351-3430460 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 70443 60 Natrialba_phage(12.5%) protease,tRNA,transposase NA
DBSCAN-SWA_2 77633 : 136106 54 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164891 : 236265 57 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,tRNA,transposase NA
DBSCAN-SWA_4 250679 : 304063 49 Bacillus_phage(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_5 391898 : 449407 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 621843 : 722307 111 uncultured_Caudovirales_phage(13.79%) terminase,tRNA,tail,transposase NA
DBSCAN-SWA_7 749232 : 822394 58 Streptococcus_phage(16.67%) transposase NA
DBSCAN-SWA_8 860836 : 914967 42 Vibrio_phage(25.0%) transposase,holin NA
DBSCAN-SWA_9 935714 : 1070877 118 uncultured_Caudovirales_phage(10.0%) tRNA,transposase NA
DBSCAN-SWA_10 1079498 : 1158525 59 Planktothrix_phage(18.18%) tRNA,transposase,holin NA
DBSCAN-SWA_11 1317945 : 1386431 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_12 1446922 : 1502410 56 Mollivirus(16.67%) protease,transposase NA
DBSCAN-SWA_13 1541733 : 1599815 60 Planktothrix_phage(15.38%) protease,tRNA,transposase NA
DBSCAN-SWA_14 1655017 : 1726171 54 Ectocarpus_siliculosus_virus(10.0%) transposase NA
DBSCAN-SWA_15 2198665 : 2253901 50 Lake_Baikal_phage(25.0%) protease,transposase NA
DBSCAN-SWA_16 2257008 : 2311277 49 Klosneuvirus(14.29%) tRNA,transposase NA
DBSCAN-SWA_17 2350390 : 2413966 49 uncultured_Caudovirales_phage(11.11%) protease,transposase NA
DBSCAN-SWA_18 2685952 : 2731681 47 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_19 2788191 : 2860094 54 Moraxella_phage(14.29%) transposase NA
DBSCAN-SWA_20 2868119 : 2924902 39 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_21 2955288 : 2998979 42 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_22 3183379 : 3244407 49 Xanthomonas_phage(50.0%) transposase NA
DBSCAN-SWA_23 3266132 : 3313723 39 Tupanvirus(16.67%) transposase,holin NA
DBSCAN-SWA_24 3379953 : 3433694 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_25 3439849 : 3499149 48 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_26 3514087 : 3572160 47 Planktothrix_phage(12.5%) tRNA,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage