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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025352 Bordetella pertussis strain H920 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 31 0

Results visualization

1. CP025352
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025352_1 250590-250674 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025352_2 432033-432126 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025352_3 995300-995394 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025352_4 1892005-1892132 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025352_5 3430667-3430776 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 70443 60 Natrialba_phage(12.5%) protease,tRNA,transposase NA
DBSCAN-SWA_2 77633 : 136107 54 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164891 : 225402 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,tRNA,transposase NA
DBSCAN-SWA_4 233335 : 286923 48 Bacillus_phage(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_5 390856 : 448365 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 635740 : 735852 108 uncultured_Caudovirales_phage(13.33%) terminase,tRNA,transposase,tail NA
DBSCAN-SWA_7 747139 : 820301 58 Streptococcus_phage(16.67%) transposase NA
DBSCAN-SWA_8 853048 : 902312 40 Vibrio_phage(33.33%) holin,transposase NA
DBSCAN-SWA_9 911924 : 976864 60 Bacillus_phage(18.18%) transposase NA
DBSCAN-SWA_10 996264 : 1047229 41 Enterococcus_phage(25.0%) transposase NA
DBSCAN-SWA_11 1059447 : 1117110 47 uncultured_Mediterranean_phage(37.5%) tRNA,holin,transposase NA
DBSCAN-SWA_12 1317179 : 1385666 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_13 1446157 : 1501645 56 Mollivirus(16.67%) protease,transposase NA
DBSCAN-SWA_14 1794215 : 1842229 44 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_15 1845622 : 1907876 54 Lake_Baikal_phage(21.43%) protease,tRNA,transposase NA
DBSCAN-SWA_16 1923915 : 1977399 46 Klosneuvirus(22.22%) protease,tRNA,transposase NA
DBSCAN-SWA_17 1988603 : 2037999 44 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_18 2049495 : 2113864 52 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_19 2300330 : 2361678 52 Yellowstone_lake_phycodnavirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_20 2382469 : 2453623 54 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_21 2494563 : 2556410 60 Planktothrix_phage(14.29%) protease,transposase,tRNA NA
DBSCAN-SWA_22 2686240 : 2726909 43 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_23 2782374 : 2855244 59 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_24 2858387 : 2925198 49 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_25 2955584 : 2994773 38 Planktothrix_phage(50.0%) transposase NA
DBSCAN-SWA_26 3183693 : 3244722 49 Xanthomonas_phage(50.0%) transposase NA
DBSCAN-SWA_27 3266447 : 3304862 36 Tupanvirus(16.67%) holin,transposase NA
DBSCAN-SWA_28 3380269 : 3434010 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_29 3440165 : 3499465 48 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_30 3514403 : 3573525 48 Planktothrix_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_31 4005738 : 4070650 58 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage