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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025351 Bordetella pertussis strain H813 chromosome, complete genome 5 crisprs cas3,csa3,DEDDh,DinG 0 0 29 0

Results visualization

1. CP025351
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025351_1 644871-644980 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025351_2 2144839-2144966 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025351_3 2929519-2929635 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025351_4 3644397-3644490 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025351_5 3825849-3825933 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 122073 110 Planktothrix_phage(16.67%) transposase,protease,tRNA NA
DBSCAN-SWA_2 232666 : 307010 54 uncultured_Mediterranean_phage(15.38%) transposase NA
DBSCAN-SWA_3 486899 : 607268 102 Acinetobacter_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_4 611682 : 675515 49 Pandoravirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_5 694426 : 771735 59 Bacillus_phage(20.0%) integrase,transposase,protease,tRNA attL 741563:741581|attR 761451:761469
DBSCAN-SWA_6 1027073 : 1120061 87 Bacillus_virus(27.27%) transposase NA
DBSCAN-SWA_7 1150447 : 1221418 52 uncultured_Mediterranean_phage(25.0%) transposase,protease NA
DBSCAN-SWA_8 1321638 : 1378849 50 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_9 1469078 : 1521231 45 Salmonella_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_10 1565156 : 1624018 53 Streptococcus_virus(11.11%) transposase,protease,tRNA NA
DBSCAN-SWA_11 1669190 : 1724781 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_12 1746439 : 1838409 60 Brevibacillus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_13 1929213 : 2000731 58 Faecalibacterium_phage(12.5%) transposase,protease NA
DBSCAN-SWA_14 2047048 : 2095063 44 Moraxella_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_15 2098456 : 2159661 53 Lake_Baikal_phage(21.43%) transposase,protease,tRNA NA
DBSCAN-SWA_16 2187444 : 2228135 36 Klosneuvirus(25.0%) transposase,protease,tRNA NA
DBSCAN-SWA_17 2239339 : 2288735 44 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_18 2300231 : 2364600 52 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_19 2529061 : 2587305 53 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_20 2629585 : 2696085 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_21 2899148 : 2980425 59 Planktothrix_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_22 2989493 : 3038538 45 uncultured_Mediterranean_phage(42.86%) transposase,holin,tRNA NA
DBSCAN-SWA_23 3050145 : 3190713 117 Bacillus_virus(11.11%) transposase,holin NA
DBSCAN-SWA_24 3313301 : 3356208 35 Planktothrix_phage(50.0%) transposase NA
DBSCAN-SWA_25 3365500 : 3398183 42 uncultured_Caudovirales_phage(20.0%) transposase,tail,tRNA,terminase NA
DBSCAN-SWA_26 3600401 : 3655375 44 Lake_Baikal_phage(20.0%) transposase NA
DBSCAN-SWA_27 3745188 : 3799383 54 Paramecium_bursaria_Chlorella_virus(14.29%) transposase,protease NA
DBSCAN-SWA_28 3809999 : 3870888 51 uncultured_Caudovirales_phage(33.33%) transposase,protease,tRNA NA
DBSCAN-SWA_29 4005565 : 4070477 58 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage