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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025363 Bordetella pertussis strain H902 chromosome, complete genome 4 crisprs csa3,cas3,DinG,DEDDh 0 0 31 0

Results visualization

1. CP025363
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025363_1 250591-250675 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025363_2 432034-432127 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025363_3 996352-996446 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025363_4 3430385-3430494 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 122073 110 Planktothrix_phage(16.67%) transposase,tRNA,protease NA
DBSCAN-SWA_2 164893 : 225404 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) transposase,tRNA,protease NA
DBSCAN-SWA_3 233336 : 286924 48 Bacillus_phage(25.0%) transposase,tRNA,protease NA
DBSCAN-SWA_4 390857 : 448366 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_5 620802 : 721266 111 uncultured_Caudovirales_phage(13.79%) transposase,tRNA,terminase,tail NA
DBSCAN-SWA_6 748191 : 821353 58 Streptococcus_phage(16.67%) transposase NA
DBSCAN-SWA_7 854100 : 903364 40 Vibrio_phage(33.33%) transposase,holin NA
DBSCAN-SWA_8 912976 : 977916 60 Bacillus_phage(18.18%) transposase NA
DBSCAN-SWA_9 997316 : 1060467 53 Enterococcus_phage(16.67%) transposase NA
DBSCAN-SWA_10 1066451 : 1134613 55 uncultured_Mediterranean_phage(25.0%) transposase,holin,tRNA NA
DBSCAN-SWA_11 1156531 : 1218701 50 Erysipelothrix_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_12 1269629 : 1326840 50 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_13 1417073 : 1469226 45 Salmonella_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_14 1513151 : 1572013 53 Streptococcus_virus(11.11%) transposase,tRNA,protease NA
DBSCAN-SWA_15 1617185 : 1672776 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_16 1905540 : 1975192 56 Staphylococcus_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_17 1986688 : 2036084 44 Erysipelothrix_phage(16.67%) transposase NA
DBSCAN-SWA_18 2047288 : 2087979 36 Klosneuvirus(25.0%) transposase,tRNA,protease NA
DBSCAN-SWA_19 2115762 : 2176967 53 Lake_Baikal_phage(21.43%) transposase,tRNA,protease NA
DBSCAN-SWA_20 2180360 : 2228375 44 uncultured_Mediterranean_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_21 2474963 : 2533207 53 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_22 2575485 : 2641985 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_23 2805589 : 2860106 49 Diachasmimorpha_longicaudata_entomopoxvirus(20.0%) transposase NA
DBSCAN-SWA_24 2868131 : 2924916 40 uncultured_Mediterranean_phage(28.57%) transposase,protease NA
DBSCAN-SWA_25 2955302 : 2998993 42 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_26 3183411 : 3244440 49 Xanthomonas_phage(50.0%) transposase NA
DBSCAN-SWA_27 3266165 : 3304580 36 Tupanvirus(16.67%) transposase,holin NA
DBSCAN-SWA_28 3379987 : 3433728 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_29 3439883 : 3499183 48 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_30 3514121 : 3572194 47 Planktothrix_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_31 4004406 : 4069318 58 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage