CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP025377	Bordetella pertussis strain I323 chromosome, complete genome	5 crisprs	csa3,cas3,DinG,DEDDh	0	0	31	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP025377_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025377_1

250588-250672

Orphan

Consensus_repeat	Method
GGTGCCTGTCCCCGCGGGGACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025377_1

>merge|CP025377|1|250588-250672|CRISPRCasFinder
GGTGCCTGTCCCCGCGGGGACAGATACCGTCTTGGCCGTCAAGCGTTCATGGCGTATGACAGGGTGCCTGTCCCCGCGGGGACAG

>CP025377|1|1|250588-250672|CRISPRCasFinder
GGTGCCTGTCCCCGCGGGGACAG	ATACCGTCTTGGCCGTCAAGCGTTCATGGCGTATGACAG
GGTGCCTGTCCCCGCGGGGACAG

Protein	Signature genes	Signature genes Name	Protein_function
CP025377.1\|AZX88692.1\|253596_254235_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182775
CP025377.1\|AZX88688.1\|248573_249275_-\|DnaA-regulatory-inactivator-Hda	unknown	unknown	gnl\|CDD\|236347
CP025377.1\|AZX88684.1\|245059_246016_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
CP025377.1\|AZX88698.1\|260959_262714_+\|gamma-glutamyltransferase	unknown	unknown	gnl\|CDD\|223482
CP025377.1\|AZX88687.1\|247878_248577_-\|HAD-IB-family-hydrolase	unknown	unknown	gnl\|CDD\|319796
CP025377.1\|AZX88682.1\|240332_241376_-\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270320
CP025377.1\|AZX88689.1\|249527_250577_+\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
CP025377.1\|AZX88691.1\|251620_253510_-\|DNA-mismatch-repair-protein-MutL	unknown	unknown	gnl\|CDD\|234630
CP025377.1\|AZX88681.1\|239545_240289_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
CP025377.1\|AZX88685.1\|246034_246526_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl\|CDD\|172582
CP025377.1\|AZX88696.1\|258905_259889_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE	unknown	unknown	gnl\|CDD\|270295
CP025377.1\|AZX88690.1\|250682_251624_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	unknown	unknown	gnl\|CDD\|234626
CP025377.1\|AZX88695.1\|257789_258770_-\|AEC-family-transporter	unknown	unknown	gnl\|CDD\|223751
CP025377.1\|AZX88683.1\|241546_243649_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|129868
CP025377.1\|AZX88686.1\|246522_247878_-\|polynucleotide-adenylyltransferase-PcnB	unknown	unknown	gnl\|CDD\|130997
CP025377.1\|AZX88693.1\|255693_256230_-\|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl\|CDD\|223873
CP025377.1\|AZX88680.1\|238113_238524_+\|4-carboxymuconolactone-decarboxylase	unknown	unknown	gnl\|CDD\|131478
CP025377.1\|AZX88694.1\|256381_257773_+\|class-II-fumarate-hydratase	unknown	unknown	gnl\|CDD\|234779
CP025377.1\|AZX88697.1\|259953_260853_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176107
CP025377.1\|AZX91884.1\|254377_255622_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|182376

Protein	Function_ID	Function_description	E-value
CP025377.1\|AZX88692.1\|253596_254235_+\|hypothetical-protein	gnl\|CDD\|182775	PRK10847, PRK10847, DedA family protein.	1.10927e-69
CP025377.1\|AZX88688.1\|248573_249275_-\|DnaA-regulatory-inactivator-Hda	gnl\|CDD\|236347	PRK08903, PRK08903, DnaA regulatory inactivator Hda; Validated.	2.81236e-100
CP025377.1\|AZX88684.1\|245059_246016_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	6.01101e-118
CP025377.1\|AZX88698.1\|260959_262714_+\|gamma-glutamyltransferase	gnl\|CDD\|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	0
CP025377.1\|AZX88687.1\|247878_248577_-\|HAD-IB-family-hydrolase	gnl\|CDD\|319796	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C. This family includes Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C, PgpC (previously named yfhB) which catalyzes the dephosphorylation of phosphatidylglycerol-phosphate (PGP) to phosphatidylglycerol (PG). This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.91431e-64
CP025377.1\|AZX88682.1\|240332_241376_-\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270320	cd13602, PBP2_TRAP_BpDctp6_7, Substrate-binding domain of a pyroglutamic acid binding DctP subfamily of the tripartite ATP-independent periplasmic transporters; contains the type 2 periplasmic binding protein fold. DctP6 and DctP7 groups of the TRAP transporters that involved in pyroglutamic acid transport. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.99378e-85
CP025377.1\|AZX88689.1\|249527_250577_+\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
CP025377.1\|AZX88691.1\|251620_253510_-\|DNA-mismatch-repair-protein-MutL	gnl\|CDD\|234630	PRK00095, mutL, DNA mismatch repair endonuclease MutL.	0
CP025377.1\|AZX88681.1\|239545_240289_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	5.58304e-45
CP025377.1\|AZX88685.1\|246034_246526_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl\|CDD\|172582	PRK14092, PRK14092, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase.	2.78166e-87
CP025377.1\|AZX88696.1\|258905_259889_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE	gnl\|CDD\|270295	cd13577, PBP2_BugE_Glu, Glutamate transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	4.35876e-158
CP025377.1\|AZX88690.1\|250682_251624_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	gnl\|CDD\|234626	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.	4.17279e-156
CP025377.1\|AZX88695.1\|257789_258770_-\|AEC-family-transporter	gnl\|CDD\|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	1.13912e-41
CP025377.1\|AZX88683.1\|241546_243649_+\|hypothetical-protein	gnl\|CDD\|129868	TIGR00786, TRAP_transporter_permease_protein_SiaT, TRAP transporter, DctM subunit. The Tripartite ATP-independent Periplasmic Transporter (TRAP-T) Family (TC 2.A.56)- DctM subunit TRAP-T family permeases generally consist of three components, and these systems have so far been found in Gram-negative bacteria, Gram-postive bacteria and archaea. Only one member of the family has been both sequenced and functionally characterized. This system is the DctPQM system of Rhodobacter capsulatus (Forward et al., 1997). DctP is a periplasmic dicarboxylate (malate, fumarate, succinate) binding receptor that is biochemically well-characterized. DctQ is an integral cytoplasmic membrane protein with 4 putative transmembrane a-helical spanners (TMSs). DctM is a second integral cytoplasmic membrane protein with 12 putative TMSs. These proteins have been shown to be both necessary and sufficient for the proton motive force-dependent uptake of dicarboxylates into R. capsulatus. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.77055e-96
CP025377.1\|AZX88686.1\|246522_247878_-\|polynucleotide-adenylyltransferase-PcnB	gnl\|CDD\|130997	TIGR01942, pcnB, poly(A) polymerase. This model describes the pcnB family of poly(A) polymerases (also known as plasmid copy number protein). These enzymes sequentially add adenosine nucleotides to the 3' end of RNAs, targeting them for degradation by the cell. This was originally described for anti-sense RNAs, but was later demonstrated for mRNAs as well. Members of this family are as yet limited to the gamma- and beta-proteobacteria, with putative members in the Chlamydiacae and spirochetes. This family has homology to tRNA nucleotidyltransferase (cca).	4.58369e-147
CP025377.1\|AZX88693.1\|255693_256230_-\|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl\|CDD\|223873	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only].	2.28113e-54
CP025377.1\|AZX88680.1\|238113_238524_+\|4-carboxymuconolactone-decarboxylase	gnl\|CDD\|131478	TIGR02425, putative_gamma-carboxymuconolactone_decarboxylase, 4-carboxymuconolactone decarboxylase. Members of this family are 4-carboxymuconolactone decarboxylase, which catalyzes the third step in the catabolism of protocatechuate (and therefore the fourth step in the catabolism of para-hydroxybenzoate, of 3-hydroxybenzoate, of vanillate, etc.). Most members of this family are encoded within protocatechuate catabolism operons. This protein is sometimes found as a fusion protein with other enzymes of the pathway, as in Rhodococcus opacus, Streptomyces avermitilis, and Caulobacter crescentus. [Energy metabolism, Other].	1.36265e-47
CP025377.1\|AZX88694.1\|256381_257773_+\|class-II-fumarate-hydratase	gnl\|CDD\|234779	PRK00485, fumC, fumarate hydratase; Reviewed.	0
CP025377.1\|AZX88697.1\|259953_260853_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176107	cd08415, PBP2_LysR_opines_like, The C-terminal substrate-domain of LysR-type transcriptional regulators involved in the catabolism of opines and that of related regulators, contains the type 2 periplasmic binding fold. This CD includes the C-terminal substrate-domain of LysR-type transcriptional regulators, OccR and NocR, involved in the catabolism of opines and that of LysR for lysine biosynthesis which clustered together in phylogenetic trees. Opines, such as octopine and nopaline, are low molecular weight compounds found in plant crown gall tumors that are produced by the parasitic bacterium Agrobacterium. There are at least 30 different opines identified so far. Opines are utilized by tumor-colonizing bacteria as a source of carbon, nitrogen, and energy. NocR and OccR belong to the family of LysR-type transcriptional regulators that positively regulates the catabolism of nopaline and octopine, respectively. Both nopaline and octopalin are arginine derivatives. In Agrobacterium tumefaciens, NocR regulates expression of the divergently transcribed nocB and nocR genes of the nopaline catabolism (noc) region. OccR protein activates the occQ operon of the Ti plasmid in response to octopine. This operon encodes proteins required for the uptake and catabolism of octopine. The occ operon also encodes the TraR protein, which is a quorum-sensing transcriptional regulator of the Ti plasmid tra regulon. LysR is the transcriptional activator of lysA gene encoding diaminopimelate decarboxylase, an enzyme that catalyses the decarboxylation of diaminopimelate to produce lysine. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.62875e-38
CP025377.1\|AZX91884.1\|254377_255622_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|182376	PRK10319, PRK10319, N-acetylmuramoyl-L-alanine amidase AmiA.	7.29619e-86

>CP025377.1|AZX88689.1|249527_250577_+|phosphoribosylformylglycinamidine-cyclo-ligase
MTNQHSAPLTYRDAGVDIDAGDALVDRIKPLAARTMRPGVLAGIGGFGALFEVPKKFREPVLVSGTDGVGTKLRLAFDWNRHDTVGIDLVAMSVNDILVQGAEPLYFLDYFACGKLSVDTAAAVVGGIARGCELAGCALIGGETAEMPGMYPDGEYDLAGFAVGAVDKSAIIDGKSIQPGDVVLGLASSGAHSNGYSLVRKILERAGARPDQDFHGQPLVDVVMAPTRIYVKQVLAALDRHGPAIKGLAHITGGGLLDNVPRILQPGMAAQLQRDGWEMPKLFQWLQQQGSVADAEMHRVFNCGIGMVLVVAADQADAVAATLREQGEIVNRIGEIVPQQDGMAQTVVV
>CP025377.1|AZX88688.1|248573_249275_-|DnaA-regulatory-inactivator-Hda
MNRQLLLDVLPAPAPALNNYIAGPNGQALAAAHALTAGRAIYLWGPAGCGRTHLLRGLSARPEAIYIDAARAAQSLRELAEADSTAPMPRLVAVDDVHRMDDARQAGLFALYNRWRESAATGRAFALAVSGDRAPMSLPLREDLRTRLGWDLVFRLDPLSDADKLAALTAQAAERGLQLAPEVINWMLTHHERDIRKLAALLDALDRYSLATGRPITIPLLRAMLADPHSQAT
>CP025377.1|AZX88687.1|247878_248577_-|HAD-IB-family-hydrolase
MTTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIAQARGWQVIDLFDHLEDAKS
>CP025377.1|AZX88686.1|246522_247878_-|polynucleotide-adenylyltransferase-PcnB
MITETIRKFVGRLFAPALRGPQRIGAERHGIDRRNVSRHAIKVCDVLRQHGYEAYIVGGAVRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPASDDQETDEHGRILRDNVFGSQEEDAARRDFTMNALYYDPHTEEVIDYHQGVQDLKKRQVRIIGDPVKRYREDPVRMLRAVRFAAKLNGSIDTATRQPIRTMASLIENVPASRLFDEMLKLLTCGHAMDCLRQLRNDGLHHGLLPLLDVVLEQPGGENFVELALERTDARVRAGKTISPSFLFAALLWQLVDVRWKQLRAQGEHNIPALVQAADSVLDEQTEKLAIQRRFSSDMREIWFMQPRFERRAGKTIYRMLEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANGDDATRAEMIEETAHLPRETGDAPAQKRRRPRRRPSNRPREPQ
>CP025377.1|AZX88685.1|246034_246526_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MNGSPASTLAYVGLGASLGDAAATLRSVLAELAAAPGILACKASRLYRTAPVEAQGPDFVNAVAALDTTLAPLDLLDLLQALEQRHGRERPYRNAPRTLDLDLLLYGEQAIDHPRLSVPHPRMHERAFVLAPLCELVPALRLAQGDCAALLAALEDQAIEPLR
>CP025377.1|AZX88684.1|245059_246016_+|tripartite-tricarboxylate-transporter-substrate-binding-protein
MKKRIWGTLLAAAMTVGSGAAHAGYPDKAVRIVVPFAAGGGVDALARPFAKELGDILGQSIVVENKPSNTGQIGATDVARAAADGYTLLLSSAAFATTPAFYPQVPYDPVKDFSPVMIMAAAPQVLVASNRFKAASLPDVLAQARQSDRINFALSASTGIQALATAMLAGQGGVTFMTIPYKGAGAAFMDLISGEVDLMIDNPASSLVHVRAGKLRVLATTGSKRMAILPDVPTVAETLPGFEARNWFVLAAPQGTPPAVIQKLNEASARALNTPAMRQMLERDGIDLVADSPAHAAAFLQDEIAKWGKVVKEGNLQP
>CP025377.1|AZX88683.1|241546_243649_+|hypothetical-protein
MSSIEMPAPVMPIEPAELAGASPYPLAIDQDFCLIRWMAAISRACGALATVALLLMALSMCYEIFSRYLFNAPTAWATEISGYLLVATVFFGLAAAQASNSHVQVELWIDRLSAPVRLRVELLCQWLALLFCVVLGWQMASFNVREYLNDTRDWGLLSTPQWMPELAVSVGMVVFCMSILVDIYRLSPPAQAWRRWLTPALLALLAAALVALGANAVPMAAGGRFDWGMALIVAALLACAWAWSGVRTLAHVVLVVGGCAVLYGLARGQSLGWVAFLLVASMMLLLFLGVRIGVALGLVGLFGVYFLLSRPQLSLLAERAWSSTNTFTLTAVPMFIFMGGLLLRSGITAGMFDALVRWFGRAPGGLAHASAGASAVFAAVSGSSLATAATLGKVACPDMIERGYSPRLTYGVAAAGATLGILIPPSIPMIIYGTTVGASVTHLFLAGMLPGLLLMACFMLGALVWALAVPGSAPVARAYTLREKLSASRGMVPFVAIIGAVLGSMYTGVATPTEAAAIGAVSAFVLCLVRRQLSWRALFEIAHDSAKVTALLLLIVVGAGIFSWVFDYLRLPREVVNLIQGADLSPALIVAAMVLAYLVLGMFVESIAMMLMTLPVTYPIAMSLGLDPIWFGVFLVLMIELGLITPPVGMVLFVLRSMNEKARFTDIIRGALPFVLIILLFLCLIYIYPQIVMWLPQQVK
>CP025377.1|AZX88682.1|240332_241376_-|C4-dicarboxylate-ABC-transporter-substrate-binding-protein
MSQRFPLPRGFQAALAAAALCTASWSGAAAAQTYDLTMAVITSPGDGYSILTASVPERVAKATDGKVKVTVSDSLVPPAQIATAVREGRVDMSAALHTYLAADEPRMGIFNLPGLINNIQEYKQVCDAFWCEDTRKIWKDKWNAIVLAEGAWCTQQLFSKDPIHKVEDFKGKRLRVHNPQTAEVVNALGGKPVAMPTTEIFPALERGVIDGLFISTCVGGSLEFWRIAKNVQNWSLGPINGWAILANPDSWQKLPADVQKQVQGAMDALQQEAFGNYDTFVSNAQQEMMKKGVTFWVAPEEERAKLMQQQYIGPSYEAWNKRAKQVGFDGPAYLDRVRTTLGKSASN
>CP025377.1|AZX88681.1|239545_240289_-|GntR-family-transcriptional-regulator
MPFPFCNTNRMTSPAAPEGEFKVQRVASVLRHSVTESIRNAILVGRFRPGERLPERELCEMTGVSRTLVREALRQLESEGLIVVIPHRGPVVERLSPEQARGIYQVREELEGLACQLFAEHATEPQLAALQEAFQALKRALTRGTPLEQIAAKNAFYQQLLDGAGNEALTTTLRLLNSRVMLLRSTSMQAPGRAKHSVAELSNLLQALVARDGKAARKAGSLHVRNAASVAIAILQDSLADAAATAE
>CP025377.1|AZX88680.1|238113_238524_+|4-carboxymuconolactone-decarboxylase
MALRPEFQTEQFQKGLAVRRAVVGDAYVDKSLNSADDLTASLQKLVTEYCWGEVWTRPGLERKTRSFLNLAMLIALNRPNELRLHLRGAINNGVTKDEIVEVVLQAAIYCGVPAALDAMKAVREVVETMEKEGAFA
>CP025377.1|AZX88690.1|250682_251624_-|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA
MTPRAIICLAGPTAAGKSASTLALAQRWPLEIINVDSATIYRGMDIGTAKPSAAERAQVPQHLLDIRDPAQSYSAAEFRADALRLIAEIHARGRIPLLAGGTMLYYKALREGLDDLPQADPALRAELEARAARLGWPALHAELALLDPATAARLSPNDSQRIQRALEICRLAGQPMSALLQGERRGDAPSPYRYVTLSLEPSERAALHARIAQRFDAMLAAGLVEEVRGLHARPDLHPGLPSVRCVGYRQMWSYLDGDIDLDTAREQGVAATRQLAKRQLTWLRAQPERVIIDCLAGDAVARTVDAMARALPD
>CP025377.1|AZX88691.1|251620_253510_-|DNA-mismatch-repair-protein-MutL
MSDRRPIATLPDLLISQIAAGEVIERPASVLKEILENAIDAGARAIEVRLEGGGIRRIAVTDDGSGIPPEELPLALTRHATSKIRSLDELESVASMGFRGEALASIASVADLTIISRTRGAEHAWQIDGGSLQVSPASGPPGTTIDVRQLFDRVPARRKFLRSEATEFGHCVDAMERIALAHPEVAFRLFHHDRAQRQWLPADHGQRIRDVLGAEFVGHVLPVLAAAGAIALMGMVTRPTAARARADRQYLYVNGRFVRDRTVSHALRSAYADVLHGDRQPAYVLYLDIDPGAVDVNVHPAKHEVRFRDSGAVHRFVSQVVGQTLAQTGGAEAVPAGVPDGAAPDTAYAGEPAAAAPGLAEPRAPYPAAYPSPGQSPYQGSPARPHTQVPFRLHGEPAGIPATDWQSLYRPLPGDAAPAATALRAAPATPLPTADEHPLGQALAQLHGIYILAQNSRGLVLVDMHAAHERVVYEQLKRALDDRALPRQDLLVPVVFHAAEKDVALVEEHETQLNELGFEMRPSGPASIAVRSVPALLARGDIESLARAVLRDLGAVGVSRLLTEQRNELLSTMACHGSVRANRRLTLEEMNALLRQMEITERADQCNHGRPTWVQWSVNDLDKLFLRGQ
>CP025377.1|AZX88692.1|253596_254235_+|hypothetical-protein
MLDFFNMVLHIDQTLGIWVEQYGVWVYLVLFLIVFAETGLVVLPFLPGDSLLFIAGAFGATGHMDPVLTAALLIVAAISGNTVNYTIGRYIGPRVFSMNLRFLDRNALMRTHAFYEKHGGKTIVMSRFIPVIRTFAPFVAGVADMRLARFQLFNIGGALLWVISLVAAGYFFGNIPLVREHLNTIVLIGLGAAIVPVVIGALVRLLQVRRGQ
>CP025377.1|AZX91884.1|254377_255622_-|N-acetylmuramoyl-L-alanine-amidase
MRTWPADEYTRVTLELDSELKAEHFTLENPHRLVVDIEGLSVNAALNDLVSKVRHDDPYIQGLRVAQNRPNVVRLVFDLKQSVAPQVFTLKPVADYQYRLVLDLYPKVAQDPLMAILNKQSGPDVDDPLARVLDEIARNQPAPDQPAAPLARGQEPAPALPAPPIKPLPAPGRSASRKRMLTIALDPGHGGEDPGAIGRSGLREKDVVLRIARRLKTLIDAQPYMRAYLTRDDDYFVPLHVRVQKARRVRADLFVSIHADAFIKPTANGSSVFALSERGASSTQARWLADKENAADLIGGVNLGSHDRQVAKVLLDLSTTAQINDSLKVGSAFLDEIKKINRLHKNRVEQAGFAVLKAPDIPSILVETAFISNPKEEALLRSAAHQEKLAQAMMTGIDRYFTANPPLARVGDVS
>CP025377.1|AZX88693.1|255693_256230_-|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MSAPPTTLCLHLPDEAATENLARQLAPLVDGRRGGQPGGQIHLQGDLGAGKTAFTRALLRECGIQGRIKSPSYALLESYKVSNLYFYHLDFYRFSDSREWLDAGFRDLLRDDAVVLIEWPERAAGLLPPPDLLISLAYADQGRDASLTAHTARGQTWLNAIVPPPTARSLPAPPPADA
>CP025377.1|AZX88694.1|256381_257773_+|class-II-fumarate-hydratase
MKTRTEKDTFGPIEVPEQHLWGAQTQRSLHFFAISTEKMPVPLVAAMARLKRAAAKVNAELGELDPQVADAIMRAADEVIAGKWPDEFPLSVWQTGSGTQSNMNMNEVLANRASELLGGERGEGRKVHPNDHVNRGQSSNDTFPTAMHVAAAVEVEHRVLPALKALRGTLAAKSAAFYDIVKIGRTHLQDATPLTLGQEISGYVAQLDLAEQQIRATLAGLHQLAIGGTAVGTGLNAHPQFSAKVSAELAHDTGSAFVSAPNKFQALASHEALLFAHGALKTLAAGLMKIANDVRWLASGPRSGLGEISIPENEPGSSIMPGKVNPTQCEAVTMLAAQVMGNDVAINVGGASGNFELNVFKPLVIHNFLQSVRLLADGMVSFDKHCAAGIEPNRERITELVERSLMLVTALNPHIGYDKAAQIAKKAHKENLSLKEAALALGHLTEAQFAEWVVPGDMTNARR
>CP025377.1|AZX88695.1|257789_258770_-|AEC-family-transporter
MSENSSLRRDAEAPLLSIFLPGSMSVALLVLPDFMLVALGWALRHKLGFSREFFAGTERMVYFVLFPALLFQSILRTPISAGHAMQLLQATAALMACGVALAWLAGPVLRPAPVALASAAQCGYRFNTYIGLALAASLAGGPGQTIMALIVGFAVPMANVAAVYGLARHSGNGLLRELARNPLLVSTLLSLACNLAGLSLPGPIDTVMARLGAAALALGIMCVGASLAWEGGKGHGRLIGWMLAVKLAAMPSAALGIAWALGLPALETRMLVLFSALPTASAAYVLAMRMGGDGRMVAVLISLGTLASAATIPLWLTAAAGLGAPN
>CP025377.1|AZX88696.1|258905_259889_+|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE
MNKVRTLVQAIAVATGLVAAAGAQAADAYPSKAIRVIVPFAPGGSTDIIARLVTQRMSQELGQPMVVENKGGAGGAIGASEAARAEPDGYTLSIATVSTMAVNPACRPKDLPYDPIKDFQPVTNFANTANVVAVNPKFPAKDFKGFLEELKKNPGKYSYGSSGTCGVLHLMGESFKMATGTDIVHVPYKGSGPAVADAVGGQIELIFDNLPSSMPQIQAGKLRAMAIAWPTRIDAIKDVPTFADAGFPVLNQPVWYGLLAPKGTPMDVVNKLRDAAVVALKDPKVIKALDDQGSAPSGNTPEEFAKEIKEQYDWAQDVVKKQNIKLD
>CP025377.1|AZX88697.1|259953_260853_-|LysR-family-transcriptional-regulator
MRLRHIEIFEAIRRTGSLTEAAAALHISQPAASKLLAHAEAQLGFKLFERVKGRLVATREAEILAPEVARLNQDLGSVRRLAASLRDRPHGHLRLGCAPALGLGLLPGVVRASRDAQPGITFDIHTHHSAELVQGLLAHELDLAITFDANNHPGLTRTSLGHTELVHLSRLPGAGTTRLQELGGETLIVLDARDASGSLLQMALDAQGLAPRVAIQVQTHYVACALAEAGCGDAVVDAITARAMLRPGMALRRLEPALRVPISVMTRSQDALSTLHHDFIERLRQACSVLQAQPAPQPE
>CP025377.1|AZX88698.1|260959_262714_+|gamma-glutamyltransferase
MPLRTLLAALCAAAICQAPAWAREAPGVAREDVNPEIASARSERAQAHAQRYMIATANPLASEAGYRILRAGGSATDAIIAAQLVLNLVEPQSSGIGGGAFMVHYDRGAGELRVYDSRETAPAAARPDRFLREGKPLSYAESVNNGRAVGTPGLLRGLELAHRQHGKLPWQALFEPAIAMAEQGFAVSPRLHESIAGDKALAAQPAAARYFYGPDGQAWPVGHRLRNPEFAATLRSIAREGADAFYRGPIARDIVAAVRAHPTPGDLAEADLAGYRAVVREPVCGLYRGYRLCGAPPPSSGPLAVLQMLGELEQYPLARMRPGSVEAVHYFSEAGRLAFADRDFYVADPAFVDVPVRALLDPAYLRQRGALIRPDRSMKTALPGDPQGLLAERARDDAIEVPSTSHLVAVDAAGNVVSMTSTIEAAFGSKIFVRGFLLNNEMTDFSSSYRDPEGRLVANRVEPGKRPRSSMAPMIVFRAGKPVLALGSPGGSAIINYVAKTLVGVLDWKLDVQQAIALPNLGSRNKETELERGTALEALAPALRRMGHEVRITDFPSGIQGIVIGPHGLAGGADPRREGLALGD

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Crispr_ID: CP025377_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025377_2

432030-432123

Orphan

Consensus_repeat	Method
GTGCCTGTCCCCGCCGGGACAGGCAC	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of CP025377_2

>merge|CP025377|2|432030-432123|CRISPRCasFinder
GTGCCTGTCCCCGCCGGGACAGGCACCCGGGCCCAGGAAAACCCCCACGCTGCGCCCGCTGTGCGGGCGTGCCTGTCCCCGCCGGGACAGGCAC

>CP025377|2|2|432030-432123|CRISPRCasFinder
GTGCCTGTCCCCGCCGGGACAGGCAC	CCGGGCCCAGGAAAACCCCCACGCTGCGCCCGCTGTGCGGGC
GTGCCTGTCCCCGCCGGGACAGGCAC

Protein	Signature genes	Signature genes Name	Protein_function
CP025377.1\|AZX88853.1\|433212_434613_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
CP025377.1\|AZX88860.1\|442143_443316_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173841
CP025377.1\|AZX88856.1\|437981_439214_+\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
CP025377.1\|AZX88859.1\|441040_442018_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176106
CP025377.1\|AZX88845.1\|422317_423523_+\|sodium/glutamate-symporter	unknown	unknown	gnl\|CDD\|129314
CP025377.1\|AZX88847.1\|426550_426730_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377342
CP025377.1\|AZX88852.1\|432768_433113_-\|TIGR01244-family-phosphatase	unknown	unknown	gnl\|CDD\|225984
CP025377.1\|AZX88851.1\|432209_432680_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
CP025377.1\|AZX88844.1\|421144_422122_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025377.1\|AZX88857.1\|439206_439992_+\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|181723
CP025377.1\|AZX88850.1\|431400_431799_-\|elongation-factor-G	unknown	unknown	gnl\|CDD\|234569
CP025377.1\|AZX88843.1\|420557_421052_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP025377.1\|AZX88846.1\|423519_425031_+\|TRAP-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270238
CP025377.1\|AZX88854.1\|436401_436920_-\|methyltransferase	unknown	unknown	gnl\|CDD\|224204
CP025377.1\|AZX91895.1\|425046_426360_-\|short-chain-fatty-acids-transporter	unknown	unknown	gnl\|CDD\|224942
CP025377.1\|AZX88849.1\|430318_431269_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025377.1\|AZX88855.1\|437030_437786_+\|TerC-family-protein	unknown	unknown	gnl\|CDD\|223930
CP025377.1\|AZX88848.1\|427139_427874_-\|DNA-polymerase-III-subunit-epsilon	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|235574
CP025377.1\|AZX88842.1\|419369_420428_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133030
CP025377.1\|AZX88858.1\|440058_441030_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270234

Protein	Function_ID	Function_description	E-value
CP025377.1\|AZX88853.1\|433212_434613_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	3.43796e-109
CP025377.1\|AZX88860.1\|442143_443316_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173841	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26. Putative acyl-CoA dehydrogenases (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	4.27565e-82
CP025377.1\|AZX88856.1\|437981_439214_+\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	8.36236e-118
CP025377.1\|AZX88859.1\|441040_442018_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176106	cd08414, PBP2_LTTR_aromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of aromatic compounds and that of other related regulators, contains type 2 periplasmic binding fold. This CD includes the C-terminal substrate binding domain of LTTRs involved in degradation of aromatic compounds, such as CbnR, BenM, CatM, ClcR and TfdR, as well as that of other transcriptional regulators clustered together in phylogenetic trees, including XapR, HcaR, MprR, IlvR, BudR, AlsR, LysR, and OccR. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the substrate-binding domains from ionotropic glutamate receptors, LysR-like transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	2.33368e-60
CP025377.1\|AZX88845.1\|422317_423523_+\|sodium/glutamate-symporter	gnl\|CDD\|129314	TIGR00210, Sodium/glutamate_symport_carrier_protein, sodium--glutamate symport carrier (gltS). [Transport and binding proteins, Amino acids, peptides and amines].	1.2444e-106
CP025377.1\|AZX88847.1\|426550_426730_-\|hypothetical-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	0.00323203
CP025377.1\|AZX88852.1\|432768_433113_-\|TIGR01244-family-phosphatase	gnl\|CDD\|225984	COG3453, COG3453, Uncharacterized protein conserved in bacteria [Function unknown].	3.40043e-35
CP025377.1\|AZX88851.1\|432209_432680_-\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	9.38587e-30
CP025377.1\|AZX88844.1\|421144_422122_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.0826e-23
CP025377.1\|AZX88857.1\|439206_439992_+\|enoyl-CoA-hydratase	gnl\|CDD\|181723	PRK09245, PRK09245, crotonase/enoyl-CoA hydratase family protein.	5.15941e-155
CP025377.1\|AZX88850.1\|431400_431799_-\|elongation-factor-G	gnl\|CDD\|234569	PRK00007, PRK00007, elongation factor G; Reviewed.	1.37761e-90
CP025377.1\|AZX88843.1\|420557_421052_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.34959e-07
CP025377.1\|AZX88846.1\|423519_425031_+\|TRAP-transporter-substrate-binding-protein	gnl\|CDD\|270238	cd13520, PBP2_TAXI_TRAP, Substrate binding domain of TAXI proteins of the tripartite ATP-independent periplasmic transporters; the type 2 periplasmic binding protein fold. This group includes Thermus thermophilus GluBP (TtGluBP) of TAXI-TRAP family and closely related proteins. TRAP transporters are ubiquitous in prokaryotes, but absent from eukaryotes. They are comprised of an SBP (substrate-binding protein) of the DctP or TAXI families and two unequally sized integral membrane components. Although TtGluBP is predicted to be an L-glutamate and/or an L-glutamine-binding protein, the substrate spectrum of TAXI proteins remains to be defined. A sequence-homology search also shows that TtGluBP shares low sequence homology with putative immunogenic proteins of uncharacterized function. The substrate-binding domain of TAXI proteins belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and tworeceptor cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.13066e-82
CP025377.1\|AZX88854.1\|436401_436920_-\|methyltransferase	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	1.12064e-44
CP025377.1\|AZX91895.1\|425046_426360_-\|short-chain-fatty-acids-transporter	gnl\|CDD\|224942	COG2031, AtoE, Short chain fatty acids transporter [Lipid metabolism].	6.57351e-166
CP025377.1\|AZX88849.1\|430318_431269_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.02206e-23
CP025377.1\|AZX88855.1\|437030_437786_+\|TerC-family-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	1.14565e-78
CP025377.1\|AZX88848.1\|427139_427874_-\|DNA-polymerase-III-subunit-epsilon	gnl\|CDD\|235574	PRK05711, PRK05711, DNA polymerase III subunit epsilon; Provisional.	2.40573e-142
CP025377.1\|AZX88842.1\|419369_420428_-\|glycosyltransferase	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	4.18053e-89
CP025377.1\|AZX88858.1\|440058_441030_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270234	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) proteins present in a number of bacterial species, but mainly in proteobacteria. In eubacteria, at least three families of periplasmic binding-protein dependent transporters are known: the ATP-binding cassette (ABC) transporters, the tripartite ATP-independent periplasmic transporters, and the tripartite tricarboxylate transporters (TTT). Bug proteins are the PBP components of the TTT. Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	2.06741e-117

>CP025377.1|AZX88850.1|431400_431799_-|elongation-factor-G
MTRRTSIERYRNIGISAHIDAGKATTTERILFYTGITHKLGEVHEGAATMDWMEQEQGRGITITSAATTAFWRGMAGNYPEHRINIIDTPGHVDFTIEVERSMRVLDGACMVYDSVGGVQEVATVMVVLPGQ
>CP025377.1|AZX88849.1|430318_431269_+|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDKYNLLTVHS
>CP025377.1|AZX88848.1|427139_427874_-|DNA-polymerase-III-subunit-epsilon
MRQIIFDTETTGLDPAQGHRIVEIGCVEIVNRMVTGNNLHLYLNPDRDSDPEALAVHGLTTEFLADKPRFAEVAEQFLAFIADAELIAHNAAFDVKFFNAELQRIGRDPLNTHCENIVDSLLHARSLHPGKRNSLDALCDRYGISNAHRTLHGALLDSQLLAEVWLAMTRGQDALLIDVDDQGANANGALVLGKFDASVLTVLAASEAELAEHAAYLQALDKAVGGACAWRAIEPLPAESGQPG
>CP025377.1|AZX88847.1|426550_426730_-|hypothetical-protein
MHPDTNTMLIIIAAAVALMIVGFGLRDRNLGLGLLGIGLIAALATIAYKAYITFNSFYY
>CP025377.1|AZX91895.1|425046_426360_-|short-chain-fatty-acids-transporter
MFKLMSRSAVKMVERYLPDPYVFVVLLTLVAAGAAMIIEGQTPMAVVRWWGNGFWGLLTFAMQMLLVLVTGYMLASTPLVKRMLARLASLATSAGGAIILVSVVSLAASWINWGFGLVVGALFAKQIARQVRVDYRLLVASAYSGFIIWHGGLAGSIPLTIATEGHFSADKIGIIPTGDTIFAVFNLVIVVAMFILVPLVNRLMLPDEKESVYVDPARLEEASVPASDDDKRPAARLENSRLLAWLIAAGGLAYMFDYYVVRGAGLNLNVINFSFLILAILLHGTPRRLLASLDEAIKGGAGIVIQFPFYAGIMAIMMDSGLAATLSEWFVSIASAATLPFWTFISAGIVNIFIPSGGGQWAVQSPIVISAAQALGADMPRVAMAVAWGDAWTNMLQPFWALPVLAIAGLKAKDIMGYCIIQLLVTGVIISVGLSFF
>CP025377.1|AZX88846.1|423519_425031_+|TRAP-transporter-substrate-binding-protein
MTMFIRWLILSACLLLAACSRAPDTEILQRDVGQTLAATYGPDLFDIVALRRMGSATDSTAPPGQTRRVVYYDVVLGLKKDLTLGAWDQPGAAALVSLLGAGPRSISGVKSSGNAAGDQIVAHASAIYQRDAEQWVHVAPASFTATEAPSLDTGAPPPVTRQLLQTLEQITRSVPYSASSTAQHVVQQELERSVARINGRLARLQKGYPLATGPDKGEYLAFGQALAAIGRNEQVRVIPLITGGSADNMAMLRSGAAVAALSQADIAQLAYEGKGPFESQGPFSGLRALGSLYPELVHIVVRQGDGIATVGALRGKKIALGPSGSAVRTTLETVLAAHGLQPGRDYAVIDTPAAAALPQLSEGRVDAVAQVIGTPAAPLRAALTQARLALLPLDRAAIDKLVQADPTLMALDIPANTYPSQAAAIPTVGMAALLVTTADLTRDEAAHMVDVVYRAGQDLLAAGSAQGAQVSAANAGRGLSIPLHDGAVEAFEKLGAPPLPEGR
>CP025377.1|AZX88845.1|422317_423523_+|sodium/glutamate-symporter
MISLTPVQSLLACCLVLVAGRILTTRIGVLSRYSIPDPIVGGLLFAVLATALDTWGGIQISLETNIKPTLLLIFFGCIGLTADLKLLARGGPRLIAFLLALIPFLVLQNAVGLGLAWLLDMHPLMGLIGGTITLVGGHGTGAAYAARFADINNIQDVMALAMTAATIGLVLGGIIGGPVAEWLIRRHKLDPRMAGKDANQVLPEVETTAEAPTATSFITSLTAVFVTVVVGTYLAGLVEDAPISLPNFLWCLATGAIIRNFGGYVGIRLDDRVSEIIGSISLSLFLGLTMMTLDLSSVVRLAGPLALMLVAQALVCALYAGWAVFRMLKRDYEAAVMAAAFCGFAMGATATAIANMQALTRRHGPAPESFIVVPVTGAFLVDILNVIVLTSLIALPFVGGM
>CP025377.1|AZX88844.1|421144_422122_+|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHSYMVRADLAG
>CP025377.1|AZX88843.1|420557_421052_+|GNAT-family-N-acetyltransferase
MPQSYIVRTMRPADVEAVLRVQAAVYPASLLESAALFQNRIEIAPATCQVALDGQDLIGYLIAYPWDAGLPPALDRSLERLPGAADTWFVHDCAVLPAAQGGGVAAALLAGGRAQARRLGLRRASLVALAQAVGYWLRHGYQPLADSDALRAKLAGYGDGARYM
>CP025377.1|AZX88842.1|419369_420428_-|glycosyltransferase
MFMYTEFRSQLLAGAGTSAAGQSARMAVLAGDGATGVQVSCVVPGLNEAANLRVLVPALRACLEQWCASWEIIVVDDGSTDDTAELMAQWSAVEGIRYVQLSRNFGKEAALTAGLEAADGDAVICLDADMQHPPELIGDMLAAWRNGADMVYAVRRQRDDEPWFKRVGARAFYRLLSTARGVEVPPHAGDFRLMDRRVVEALVALPERTRFMKGLYAWVGFKSQAVPYTPQARRHGASHFSAWKLFRLACDGLTAFTTWPLRLVSLIGVLFALLSLSYGGYLVADYLISGNAVSGWTTIVTALLFFAGINLISLGVVGEYVARIFDEVKGRPLFIARQRRGRAKRAAKARSQ
>CP025377.1|AZX88851.1|432209_432680_-|universal-stress-protein
MFKKILIPTDGSPLSAQAANAGICFARSTGAEVVALHVTQPFAATIGFDGMAAAYAITDEDYEKASAEQAEKYLKLILDRAETAGVKAESRAVSNFNVADGIVQAAGEAGCDLIFIGSHGRSGLSRLLLGSVTAKVLSLAHTAVLVYRVKEDKDKK
>CP025377.1|AZX88852.1|432768_433113_-|TIGR01244-family-phosphatase
MSAAIKPLTENFAVAPQLGPADMADVAAAGYKSVIINRPDFEGGPDQPTAADVSQAAQALGLQVEYQPVVGSAMTAADVARFAELLRTMPGPVLAYCRTGTRCTNLFAAAQQLG
>CP025377.1|AZX88853.1|433212_434613_-|PLP-dependent-aminotransferase-family-protein
MRQADATLVTQLADDLARRIDEHGLRPGTRLPSIRRMAEQSGVSRFTVVEAYDRLVARGLVQSRHGAGFFVRARSASLTALASARVPQAAPETPVRVDVSWLLRNMFRETAAGMPGGAGLLPPEWLDPDMVAAAVRAVGRTVRGNLVSYGSPQGYAPLRQQLASMLQADGVPAHPERNLLTTNGVTHGLDIVARHLIKPGDTVLVEDPAWFVIFGRLAAFGARPVGVPRGPDGPDLAMLDRLAAEHKPRLYIINGAVHNPIGHTLSAGAAYDILRLAERHDFMVVEDDTYADLHPGGAMKLAALDRLERVILVGGFSKMLAASLRVGYIAAGAETLQRLTDLKMLAGLTSPELGERVVHRVLVEGQYQRHIERVRARVNEARLRSIQALQQLGLSVPHEPHAGMFVWADCGRDSEPVARNAAERGMLLAPGTLFSPSGAPSTMLRFSVAMVDTPGIWQSIAAVMAQ
>CP025377.1|AZX88854.1|436401_436920_-|methyltransferase
MDTVWMEIWTTVRNEFADIPDVAEATRIVLRLGMAVALGGLLGYERERSGKAAGLRTHMLVALGAALFVLVPLQGGMEVGDLSRVLQGVIAGIGFLGAGVIIKLGNEGEIRGLTTSAGIWLTAAIGVAAGMGREATALASTLIALFVLAALRRLEKRIAARDDKRVVAQPPP
>CP025377.1|AZX88855.1|437030_437786_+|TerC-family-protein
MDYLVSLAQQPAAWAALATLIAMEVVLGIDNLIFISILTNKLPPQHQTKARRIGIGMALILRLALLGTVAFIVQLTQPVFELFGHGFSWRDVILVAGGLFLVWKATKEIHHHVDPNPGDDMFGGKAATLGFAAAVAQILMLDLVFSIDSIITAVGMTEHIPIMFVAVIVAVAVMLLAAEPLARFIERNPTVVMLALAFLMMIGMTLIAEGFGAHVPKGYIYAAMAFSALVEGLNMMARRAREGRGAGAAGG
>CP025377.1|AZX88856.1|437981_439214_+|CoA-transferase
MSGPLEGVRILDVTTVLMGPYATQILGDLGADVIKVEPPAGDNVRGIGPGRHADMGGIFLHANRSKRSIALDLKNPAGREALLKVAATCDVLVYNVRPQAMARLGLSYAEVAQANPSILYVGMYGYDQRGPYAARAAYDDLIQGAVGIPSLSVEAGSDIPRYAPSAMVDRIVGISAANAVTAGLYHRARTGQGQAIDVPMFETMAHLILGDHMMGQTFEPPLGPPGYPRILNADRRPYATRNGHICVLLYADKHWKAFFELIGQPGRDAADPRFRDIGTRTQHIHAIYRLVSDAIASRTTEEWLAAFEAADIPAMPVHTMASLLRDPHLEAIGFFGMVDHPSEGAVRMMAVPSRWSGTPPQPRGHAPRLGEHSVDVLKEAGYDDEAIAALVRNGAAIAAARQLPEGTDHD
>CP025377.1|AZX88857.1|439206_439992_+|enoyl-CoA-hydratase
MTDFLRHERHGGVLLLTMDRERTRNALSDADAVEALVQACARIGADLSVRAVVLTGSHGVFSSGGNLKTLSDTVGAGLGEPVHSLQAYRSGIQRIPLALYNLEVPTIAAVNGPAIGAGCDLACMCDIRLAARQASFAESFVKLGLTPGDGGAWLLPRIVGMSRACELAFTGRSIDAARARELGLVSEVFDADALLPAALALAQEIAQHSGHALRLTKRLLREGQHTRLDTLLELSAGFQALAHHTQEHAGALDAHLSRKRG
>CP025377.1|AZX88858.1|440058_441030_+|tripartite-tricarboxylate-transporter-substrate-binding-protein
MHSRTLALALLSVAALAQGGSARAASDYPAHPVKIIVSLPPGSGADTTARFLSKHLAERFKQPFVVENRPGGNSFIAAQAVATAPPDGYTLFVASNSPMTTNAAVFKNLPYDAVKDFAPVAPIARFPMALVVPANSPYRSVADLVAAARAAPGQLNFASGTATYQVVLELFHEQNGIKATHVPYKGTSAALADVAGGVVQYSVADVSAALPLIRGGKLRPLAVTSTRRIKDLPDVPTMQESGNKGFEAYAWTAAFFPAKVDPAIVARVSDAVQALVRSQEGKAFMEQLGGEPFVGGPDTLAAFQRDELASMRRIAKLANIQQE
>CP025377.1|AZX88859.1|441040_442018_-|LysR-family-transcriptional-regulator
MWTGQYIVHIASPAHHWRRAVELRQLKQLLVLSETLNFHRAAERLHMAQPPLSTAIKKLEQELGVQLFERLPAGLQPTPAAEVVLRYARATLFYADEIQRAAQEGASGKQGMLKVGFVGSSIYSLMPQLLSAFRKDYPRVDLVIEESTTVDLLRRLDAHTLDVALVRFPVLEPSTARITLLQADHLMLAVPAGSRYAQRDDVALDELADEPFIGYSRTHVPGMHALIMYAFQQYGVVPHIAQEAIQVQTILSLVESGLGLAIVPKVACRQAGSGVRLVNVPQLAETIKVGIALAVHPDNATPTTANFVDMACRLMQTEPAAGQAR
>CP025377.1|AZX88860.1|442143_443316_+|acyl-CoA-dehydrogenase
MGAILGTIIEALQLAAIPAHDEALRPAVRAFLDEALREMPADRRARSWMGHDAEFSRALARQGWLGLTLPVEYGGAGRSNFARFVLSEELLAVGAPVSAHWVADRQTAPLILRFGSPAQRAFYLPRIIRGEAFFAIGMSEPDTGSDLASVRTRATPVADGWLLNGRKIWTTNAHRSHYMCALVRTSGAPEDRHRGLSQMIFDLALPGIEIRPIRDIAGDAHFCEVLFDNVLLPHDALVGEEGSGWRQVMAELALERSGPERIYSSMVLLDGWLAHLRCDAAPQRAQVCLAGRLAARLAVLRSMSLAVSQRLEQGADASLAAVLVKDLGTEFEQAVPELIGQALHASPQPAPDDVLMRTLAYLTLINPTFSLRGGTRHILRGIIARELGLR

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Crispr_ID: CP025377_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025377_3

995298-995392

Orphan

Consensus_repeat	Method
TAAAAGGGCACCCGCAAGGGTGTCCTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025377_3

>merge|CP025377|3|995298-995392|CRISPRCasFinder
TAAAAGGGCACCCGCAAGGGTGTCCTTTTATTGCGAAAAGATATCTGGAAGAAAGCCTTTTCAGAGTAAAAGGGCACCCGCAAGGGTGCCTTTTT

>CP025377|3|3|995298-995392|CRISPRCasFinder
TAAAAGGGCACCCGCAAGGGTGTCCTTTT	ATTGCGAAAAGATATCTGGAAGAAAGCCTTTTCAGAG
TAAAAGGGCACCCGCAAGGGTGCCTTTTT

Protein	Signature genes	Signature genes Name	Protein_function
CP025377.1\|AZX89336.1\|994850_995231_+\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
CP025377.1\|AZX91919.1\|1002444_1003362_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
CP025377.1\|AZX89329.1\|981987_983814_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173842
CP025377.1\|AZX89339.1\|997317_998367_+\|NADP(H)-dependent-aldo-keto-reductase	unknown	unknown	gnl\|CDD\|381320
CP025377.1\|AZX89331.1\|984727_985762_+\|sulfate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224529
CP025377.1\|AZX89341.1\|1001661_1002393_+\|rRNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|224108
CP025377.1\|AZX89337.1\|995441_996167_+\|CoA-pyrophosphatase	unknown	unknown	gnl\|CDD\|239518
CP025377.1\|AZX89332.1\|987598_988663_+\|sulfate/thiosulfate-import-ATP-binding-protein-CysA	unknown	unknown	gnl\|CDD\|213263
CP025377.1\|AZX89344.1\|1008797_1009049_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
CP025377.1\|AZX89335.1\|993672_994545_-\|multidrug-DMT-transporter-permease	unknown	unknown	gnl\|CDD\|274527
CP025377.1\|AZX89334.1\|993284_993665_+\|hypothetical-protein	unknown	unknown	unknown
CP025377.1\|AZX89343.1\|1007345_1008728_+\|multidrug-transporter	unknown	unknown	gnl\|CDD\|273830
CP025377.1\|AZX91917.1\|989460_990369_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
CP025377.1\|AZX89342.1\|1004169_1007349_+\|multidrug-efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|273335
CP025377.1\|AZX89338.1\|996262_997213_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025377.1\|AZX91918.1\|998504_999521_-\|IS110-family-transposase-IS1663	unknown	unknown	gnl\|CDD\|376773
CP025377.1\|AZX89333.1\|991856_993131_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|275263
CP025377.1\|AZX89328.1\|980814_981744_+\|electron-transfer-flavoprotein-subunit-alpha	unknown	unknown	gnl\|CDD\|224936
CP025377.1\|AZX89340.1\|1001029_1001602_-\|chorismate--pyruvate-lyase	unknown	unknown	gnl\|CDD\|225703
CP025377.1\|AZX89330.1\|983896_984538_+\|peroxiredoxin	unknown	unknown	gnl\|CDD\|239314

Protein	Function_ID	Function_description	E-value
CP025377.1\|AZX89336.1\|994850_995231_+\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	1.34063e-62
CP025377.1\|AZX91919.1\|1002444_1003362_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.56316e-67
CP025377.1\|AZX89329.1\|981987_983814_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173842	cd01153, ACAD_fadE5, Putative acyl-CoA dehydrogenases similar to fadE5. Putative acyl-CoA dehydrogenase (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	6.94362e-153
CP025377.1\|AZX89339.1\|997317_998367_+\|NADP(H)-dependent-aldo-keto-reductase	gnl\|CDD\|381320	cd19094, AKR_Tas-like, Escherichia coli Tas protein and similar proteins. Escherichia coli Tas protein is the prototype of this family. It is an NADP(H)-dependent aldo-keto reductase that catalyzes the reversible reduction of ketones to the respective alcohols using NADP(H) as a hydride donor.	0
CP025377.1\|AZX89331.1\|984727_985762_+\|sulfate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224529	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism].	0
CP025377.1\|AZX89341.1\|1001661_1002393_+\|rRNA-pseudouridine-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	7.73356e-72
CP025377.1\|AZX89337.1\|995441_996167_+\|CoA-pyrophosphatase	gnl\|CDD\|239518	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes. The need of CoAses mainly arises under conditions of oxidative stress. CoAse has a conserved Nudix fold and requires a single divalent cation for catalysis. In addition to a signature Nudix motif G[X5]E[X7]REUXEEXGU, where U is Ile, Leu, or Val, CoAse contains an additional motif upstream called the NuCoA motif (LLTXT(SA)X3RX3GX3FPGG) which is postulated to be involved in CoA recognition. CoA plays a central role in lipid metabolism. It is involved in the initial steps of fatty acid sythesis in the cytosol, in the oxidation of fatty acids and the citric acid cycle in the mitochondria, and in the oxidation of long-chain fatty acids in peroxisomes. CoA has the important role of activating fatty acids for further modification into key biological signalling molecules.	5.50907e-72
CP025377.1\|AZX91917.1\|989460_990369_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP025377.1\|AZX89344.1\|1008797_1009049_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	2.42408e-12
CP025377.1\|AZX89335.1\|993672_994545_-\|multidrug-DMT-transporter-permease	gnl\|CDD\|274527	TIGR03340, phn_DUF6, phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.	3.74356e-26
CP025377.1\|AZX89343.1\|1007345_1008728_+\|multidrug-transporter	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	9.9815e-102
CP025377.1\|AZX89332.1\|987598_988663_+\|sulfate/thiosulfate-import-ATP-binding-protein-CysA	gnl\|CDD\|213263	cd03296, ABC_CysA_sulfate_importer, ATP-binding cassette domain of the sulfate transporter. Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	3.07125e-165
CP025377.1\|AZX89342.1\|1004169_1007349_+\|multidrug-efflux-RND-transporter-permease-subunit	gnl\|CDD\|273335	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate].	0
CP025377.1\|AZX89338.1\|996262_997213_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.66858e-23
CP025377.1\|AZX91918.1\|998504_999521_-\|IS110-family-transposase-IS1663	gnl\|CDD\|376773	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS116, IS110 and IS902. This region is often found with pfam01548. The exact function of this region is uncertain. This family contains a HHH motif suggesting a DNA-binding function.	2.74666e-23
CP025377.1\|AZX89333.1\|991856_993131_+\|radical-SAM-protein	gnl\|CDD\|275263	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B. Members of this family are the downstream member (B) of a pair of tandem-encoded radical SAM enzymes. Most of these radical SAM gene pairs have an additional upstream regulatory gene in the MarR family. Examples of high sequence identity (over 96 percent) from cassettes in several Treponema species of the oral cavity to those in multiple Firmicutes in the gut microbiome suggest recent lateral gene transfer, as might be expected for antibiotic resistance genes. The function is unknown.	4.71758e-24
CP025377.1\|AZX89328.1\|980814_981744_+\|electron-transfer-flavoprotein-subunit-alpha	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	1.05379e-120
CP025377.1\|AZX89340.1\|1001029_1001602_-\|chorismate--pyruvate-lyase	gnl\|CDD\|225703	COG3161, UbiC, 4-hydroxybenzoate synthetase (chorismate lyase) [Coenzyme metabolism].	1.05194e-17
CP025377.1\|AZX89330.1\|983896_984538_+\|peroxiredoxin	gnl\|CDD\|239314	cd03016, PRX_1cys, Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes and lung. The seed-specific plant 1-cys PRXs protect tissues from reactive oxygen species during desiccation and are also called rehydrins.	3.35179e-132

>CP025377.1|AZX89336.1|994850_995231_+|50S-ribosomal-protein-L19
MNLIAILEQEEIARLTGGNAVTEFAPGDTVVVSVNVVEGTRKRVQAFEGVVIAKRNRGLNSSFIVRKISSGEAVERTFQLYSPQIAGIEVKRRGDVRRAKLYYLRSRSGKSARIKEKLVLKKAKSA
>CP025377.1|AZX89335.1|993672_994545_-|multidrug-DMT-transporter-permease
MSYTSLILVVLAAMAHAAWNLLAKRAAMVGPMFVFAYGLAATILYAPWVIWVLAHDGMVWSWPVVLCILASSMLHLGYSLCLQRGYQVADLSVVYPIARGTGPLLSTMGAFTLLSEPATTTGIAGMLCVVGGVLLIATQGRLGMFRQAQAWIGVRWGVVIGLFIAAYTVVDAYGVKILLIMPVLFDWFTCATRTLMMTPHVLRRRAQYWPAMRGYWHLAIAVGVLSPLGYILVLYALRNGAPLSLVAPAREMSMMLGTLAGMFLLREKVGIGRLAGCLAILAGVVLLGSS
>CP025377.1|AZX89334.1|993284_993665_+|hypothetical-protein
MTIATTLDAATSLPTAVPGRTLGALRRLARAWAGAAVPQRKWPFPPTPPGQAQPCTPCTDSQPRSVQAVQPAQARALHAQAELSGAATQAATQVLSTKAKIIDVLLVAVWGAMIPALMWLGAAGGF
>CP025377.1|AZX89333.1|991856_993131_+|radical-SAM-protein
MASTEHSFSAGFGSPAAAPAALRGRGAVTNVPHRFQQADRVRVDDGWANPDYTAGSDAAALPSVAEALGQGGRRAIPIAVEGADASPNTCAQAPAPRTIVQAEEARKMLSRNDSPDIPFDVAANPYRGCEHGCVYCYARPTHAYLGYSPGLDFETRLVAKANAVAALRAELARPGYRASPINIGSATDAYQPIERTWRLTRGMLELLLQTRHPLTVVTKNALVERDLDLLQDLARQKLVTVFVSITTLDAAMARTLEPRASAPYRRLQTVRTLAQAGVPVGVLVAPVIPFINDESLEHILQEASAAGACYASYTVLRLPWEVKEVFETWLQAHFPDRAQRVLHRIEDLRNGRRNDTAFGSRMRGTGIWADLLRQRFALATRKLDLNRHRPELDTHRFVPPLEPGLPPARGRREARAQPGQLALF
>CP025377.1|AZX91917.1|989460_990369_+|sulfate-adenylyltransferase-subunit-CysD
MSAVMTRSHLDWLESEAIFILREVAAECARPALLFSGGKDSVVLLRLAEKAFRPGRFPFPLLHIDTGHNYDEVISFRDARAAELGETLLVRSVEDSIARGSVALRRETDSRNAAQAVTLLEAIEELGLDACIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWNLFNTRVHRGENMWVFPISNWTELDVWQYIQRERLALPSIYYSHTREVVRRKGLLVPVTRLTPPAEGETVEQLAVRFRTVGDISCTCPVASDAADPAAIIAETAVTDITERGATRMDDQTSEASMERRKREGYF
>CP025377.1|AZX89332.1|987598_988663_+|sulfate/thiosulfate-import-ATP-binding-protein-CysA
MSIEVRGLSKRFGAFRALDEVSLHIETGELVALLGPSGCGKTTLLRIIAGLESADAGSVLFAGEDATEVDVRQRQVGFVFQHYALFKHMTVFENVAFGLRVRHRSQRPSEARIRAKVLDLLGLVQLDWLADRYPAQLSGGQRQRIALARALAVEPRVLLLDEPFGALDAKVRKELRRWLRRLHDELHVASVFVTHDQEEALEVTDRVVLMNAGRIEQVGSPREVWERPATPFVYGFLGDVNQLHGHATRGVWRLGEVALPAPDLPEADNQRAIAYVRPHDIDLARAGTAAPGIPVRLNHVYLAGPSAYLELARQDDQAIIEAQVPEPLFRSLGLKEGEALLAQPRRARVFAVQP
>CP025377.1|AZX89331.1|984727_985762_+|sulfate-ABC-transporter-substrate-binding-protein
MPRNTAGIRGAIVALATVFSLGLPWAVQAQDKQTLLNVSYDPTRELYRAVDEAFIKEYQARAGVDLTVRQSHGGSGRQARSVIDGLDADVVTLALAYDIDAIADRGLLPQDWQKRLPRNSSPYTSTIVFLVRKGNPRQIHDWDDLVKDGVQVITPNPKTSGGARWNYLAAWAYALARNEGSEAKAREFVGQLLSHVPVLDTGARGSTTTFVERGVGDVLLAWENEAFLAREELGPDKFDIVVPSLSILAEPPVAVVDKVVDRKGTRAAAQAYLEYLYTPAAQEIIARNFYRPTDAGVAAKYASRFPKLKLVTIDDPIFGGWRKAQKDHFSDGGTFDQVYQPQRK
>CP025377.1|AZX89330.1|983896_984538_+|peroxiredoxin
MGQLRLGDTAPDFEQKSSIGPLRLYDYLGDSWGVLFSHPADFTPVCTTELGYTAKLAGEFAKRNVKVLALSVDPVDSHTKWIDDINDTQSTTVNFPILADDDRKVSELYDMIHPNANATLTVRSVFVIDPAKKVRLTITYPASTGRNFDEILRVIDSLQLTDSHSVATPVNWKDGEDVIIVPSLKDEAVIKEKFPKGYKALRPYLRITPQPNK
>CP025377.1|AZX89329.1|981987_983814_+|acyl-CoA-dehydrogenase
MTYATPLQDFRFALNELAGLEEILKLPGFEEVTPDLVDAILEENARFVQQAIAPLNVAGDTKPPVWNDGQVTTTPGFSQGFADYTAGGWQGLQHPQKWGGQGLPKVVAAPAGENIQAASLAFSLCPMLTDGVIEALLTVGSEAQRQTYVPKLIGGQWTGTMNLTEPQAGSDLAQVATRAVRQDDGSYRLSGQKIFITYGEHDLAENIIHLVLARTPDAPAGVKGISLFIVPKYLVNEDGSRGKRNDVWCASLEHKLGIHGSPTAVLLYGAGKGEVGEGAVGYLVGEANRGLEYMFIMMNAARYSVGQQGIGVSERAYQHAQAYARERVQGRAIEGSAAPVTIAHHPDVQRMLLTMRALTEAARAVSYVAAAAHDKGTHHPDAEVRARNRAFYEYLVPIVKGFSTESAVEVASLGIQVHGGMGFIEETGAAQHYRDARILPIYEGTTAIQANDLVGRKTLRDGGATAHASIAAMRDTLKAVAAEAQRADTADHTALRVLRDNFDQAIQSYEGAVEFILAHAASNVRAVYSSSVPYLMLAGVVHGGWQMARAALACRRHLAAGSGDAFHRHKLGTALFYGAHILPRALALAAAVRAGDVADSCGSMADIA
>CP025377.1|AZX89328.1|980814_981744_+|electron-transfer-flavoprotein-subunit-alpha
MTTLVIAEHDNAQLKGATLNTIAAASRLGGEVHVLVAGSGAQAVAEQAAQAARVSKVLLADAPQLAEGLAENLAAQVLAVAGGYSHILFAATASGKNVAPRVAAKLDVAQISDIIGVESADTFQRPIYAGNAIATVQSGDAVKVITVRTTGFDAVAAQGGSAAVEALDAVADSGLSRFVGREVAKSDRPELAGARVVVSGGRGLGSAENFKILDPLADKLGAALGASRAAVDAGYAPNDWQVGQTGKIVAPQLYVAVGISGAIQHLAGMKDSKVIVAINKDPEAPIFGVADYGLVGDLFQVVPELTGAL
>CP025377.1|AZX89337.1|995441_996167_+|CoA-pyrophosphatase
MSDSAPSRPRRTPVRPLFDPMAQPWETANQGLARVDERLLTPPELRSSLRPADHWRLDPLCAAEPRAPGREGSLVAAAVLIPLVMRADGVRVMLTQRAAHLHDHAGQVSFPGGRIEVSDATPVAAALREAQEETGLPVQQVEVLGSMPQYFTATGFAITPVVSLVQPDFELAPDAFEVAEVFEVPLSFLMDPANHRLYRAALPDGYVRQYYAMPWQRYFIWGATAGMLRNLYQTVREALPG
>CP025377.1|AZX89338.1|996262_997213_-|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP025377.1|AZX89339.1|997317_998367_+|NADP(H)-dependent-aldo-keto-reductase
MKYRKLGHTDLDVSLIGLGTMTWGEQNTEAQAHEQLDYALAHGINLVDAAEMYPVPPKPETQGRTESCIGSWLARTGRRHEVVLASKAAGPVRDAKRPSHIRDGKTFLDRKNLTQALDASLKRLQTDYLDLYQLHWPDRTTNTFGKLAYPWVDDAHTVPIEETLEVLQDFVRAGKVRHVGLSNETPWGVARFLQAAEKHGLPKVATIQNPYNLLNRIFEIGLAEFSHREGVGLLAYSPLAMGILSGKYLDGARPEGSRLALFTRFTRYSNPQAEAAARDYVMLARDHGLAPAQMALAWVNQRPFVSSNLMGATTLAQLKENIESVEVTLSDEVLQGIEAIHARQPNPAP
>CP025377.1|AZX91918.1|998504_999521_-|IS110-family-transposase-IS1663
MADSSLLSAGGQVHVFIGIDVSKAKLDCTLLTAEADKCKTKVVVNTAAGVQALLAWCAKHGAQPAQLHAILEPTGLYHEQAATALPQVRVSLVNPAQARDFAKALALRSKNDALDSYVLARYGQTLSPALWHPAPLHARQLRALLTRREALSKDLLRELNRKEKSQFSPSAPLVDGSIDKAIAFLREQIKQIERAIDQHIDNHPDLKQDCELLNSIPAIGPQAGNAILAVMHNRHIDSAQSLAAYLGVVPVQRQSGSSLNSCARLSKAGPSQVRATLYMAALVGTRHNPHIRALYQRLLKAGKSKKAALGAAMRKLVHLCFGVLKNRIPYQPNYAMNG
>CP025377.1|AZX89340.1|1001029_1001602_-|chorismate--pyruvate-lyase
MTTPIPLARGWLPAAPSTLDPLRKYWLFRPGALTAGLRQLGHVRLRVLAEYPTGAPRDEADGMRIAAQSPVWVREVLMSIDGVDSVVARSLTPLRASHGVWQGMRRLLTRPLADMLYHDPGIHRSVFVCRRLAAGVPFHATAIARAPAGGPEPALWARRSAFWRAGQPLLVAECFLPAFWSLARAPVAPR
>CP025377.1|AZX89341.1|1001661_1002393_+|rRNA-pseudouridine-synthase
MEKVRISKLMSERGLCSRREADSYIERGWVRVDGVVVSELGARALPDQVITLERAAAARQTARVTILLHKPVGYVSGQAEKGYTPAVALIDARSRYAGDRAPQRFERGQLQGLAVAGRLDIDSQGLLVLTQDGRIAKKLIGEDSEVDKEYLVRVQGRLSEAGLALLNHGLSLDGKPLRPAQVRWQNADQLRFVLREGKKRQIRRMCELVGLRVVGLKRVRIGRVSLGDLPAGQWRYLRADERF
>CP025377.1|AZX91919.1|1002444_1003362_-|LysR-family-transcriptional-regulator
MELFVEVARTLSFGRAAENLAIPKSTLSRQVAELERSVGLRLLSRTTRRVELTEAGQLYFERCQRIVAEARIAHEELQNLVETPSGPLRVNMPADFGTDFLSEAFTEFSRRYPEVTFYLDLASPEHAERVFQTCDVSIEIGDLPDSTHIARLLGVLPAHLYASPDYLARHGEPQHPDDLPRHECIQFRAGTGRVTRWPLNSGERHVEITPGNRFSVNSVSMVRNLATLGAGIAILAPMGNVREDIESGRLKRILPDWLAGPFPVYAVTDTRMLPAKTRIFVEFLMERLSNKTLAGQNNPAFLNLR
>CP025377.1|AZX89342.1|1004169_1007349_+|multidrug-efflux-RND-transporter-permease-subunit
MAKFFIDRPVFAWVIAIVLMMAGALSILSLPVAQYPNIAPPAISINVTYPGASAQTVQDTVVQVIEQQMNGIDNLQYISSESNSDGSMSITLTFSQGTNPDTAQVQVQNKLAVAQPLLPLEVQQQGIRVTKATKNFLIVAGFVSTDGTMDKSDLADYVASYIQDPISRTPGVGNFQLFGAPYAMRIWISPEKLVNFGLTASDVTTAIREQNVQVSSGQLGGQPAVRGQQLNATVIGPSRLQTPEAFGRILLKVNRDGSQVRLKDVASIELGAQTYAIDSYYNGKPASGLAIKLASGANALDTAQAVRETINGLKPYFPPGMDVVYPYDTTPFVSLSIEGVVKTLFEAVLLVFLVMYLFLQNVRATLIPTLAVPVVLLGTFGVLAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLSPRQATRKSMGQITGALIGIAMVLAAVFVPMAFFGGSTGVIYRQFSITIVSSMVLSVVVAIVFTPALCATMLKPIPKGHHGSKKGFFGWFNRTFERSSQAYANNVARSMGRTKRLLLIYVVILLGMAWMFMRIPTAFLPDEDQGILFAQVQAPAGATSERTQATIDAAVKYLLEDEKESVASVFAVNGFSFGGRGQNAAILFIKLRDWNERKGAEHRAAAVAARANAKFRAELRDAQAAVFAPPAVMELGNATGFDFQLQDRAGVGHEKLLAARNQLLQEAGASPMLVAVRPNGIEDAPQYQLDIDREKARALGVSITEINNTLATAWGSSYVNDFIDRGRVKKVFVQGEASSRMLPQDLDKWYVRNNAGDMVPFSAFSSAQWTFGPQKLNRYNGVPSYNIQGQAAPGYSSGDAMAEMERLADKLPLGIGYDWTGLSFEERLSGAQAPALYAISLIVVFLCLAALYESWSIPTAVMLVVPLGVVGALLATMTRGLSNDVYFQVGLLTTIGLAAKNAILIVEFAKEHYEEGASLTEAAVHAARQRLRPILMTSLAFILGVVPLAISTGAGSGSQNAIGTGVIGGMLTGTFLAIFFVPLFFVLTLRLFKVKRASENREDDDPHGGAQPATHGGQPQ
>CP025377.1|AZX89343.1|1007345_1008728_+|multidrug-transporter
MKPVVMRTLLSLAVATALAGCSLAPTYERPQAPVDAAYPSGPAYGAPGQAAAGAPAAADVGWRDFFGDPLLQELLALSLANNRDLRVAALNVEAARLNPSGQAGISRSYQVGASLSTWELDLFGRIRSLSEQALQLYLAQDETRLATQLTLVAETANAYLTLRADQELLALTRQTLAAQQESYKLTRQSYDLGVATELDLSQAEISLRTAERNLSQYTRMAAQDRNALVLLVGQPLPAGIGAQLDQAVALPDGVVLADLPAGLPSDLLARRPDIRAAEHQLQAANASIGAARAAFFPRISLTGSAGTASASLGGLFDAGSGAWSFAPQISVPIFAGGALRASLDLAKIQKDIGIARYEQAIQSGFREVSDALAGRGTLQEQIRSQELLVQANQRAYDLSQQRYQQGIDNYLSVLDSQRSLYTAQQTLVETRLARLSNLIQLYKALGGGWSERTVAAAQAG
>CP025377.1|AZX89344.1|1008797_1009049_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MNIIIMIIVGFVVGLITRAIMPGDQNMGYIMTTILGIIGSVVAGFLGQQLGWYAPGEPAGWIGSVVGAIIVLFVVGLVAKKRA

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Crispr_ID: CP025377_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025377_4

1817701-1817828

Orphan

Consensus_repeat	Method
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCG	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of CP025377_4

>merge|CP025377|4|1817701-1817828|CRISPRCasFinder
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCGTGGGGGCACTACTTTGCCGCTGGGCCGCCCCAAGGCAAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCGTAGCGGGCGCAGCG

>CP025377|4|4|1817701-1817828|CRISPRCasFinder
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCG	TGGGGGCACTACTTTGCCGCTGGGCCGCCCCAAGGC
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCGTAGCGGGCGCAGCG

Protein	Signature genes	Signature genes Name	Protein_function
CP025377.1\|AZX89984.1\|1823436_1824648_+\|IscS-subfamily-cysteine-desulfurase	unknown	unknown	gnl\|CDD\|184450
CP025377.1\|AZX89971.1\|1806605_1807718_+\|alkene-reductase	unknown	unknown	gnl\|CDD\|239243
CP025377.1\|AZX89974.1\|1809604_1811710_-\|poly-beta-1,6-N-acetyl-D-glucosamine-N-deacetylase-PgaB	unknown	unknown	gnl\|CDD\|274867
CP025377.1\|AZX89983.1\|1822906_1823419_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	unknown	unknown	gnl\|CDD\|273927
CP025377.1\|AZX89987.1\|1825423_1825936_+\|co-chaperone-protein-HscB	unknown	unknown	gnl\|CDD\|235133
CP025377.1\|AZX89972.1\|1807722_1808361_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372868
CP025377.1\|AZX89978.1\|1815343_1816294_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025377.1\|AZX89981.1\|1819910_1821947_+\|UvrABC-system-protein-B	unknown	unknown	gnl\|CDD\|235395
CP025377.1\|AZX89973.1\|1808341_1809601_-\|poly-beta-1,6-N-acetyl-D-glucosamine-synthase	unknown	unknown	gnl\|CDD\|236882
CP025377.1\|AZX89982.1\|1822199_1822691_+\|low-molecular-weight-phosphotyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|319971
CP025377.1\|AZX89988.1\|1826065_1827928_+\|chaperone-protein-HscA	unknown	unknown	gnl\|CDD\|235360
CP025377.1\|AZX89976.1\|1813909_1814146_+\|hypothetical-protein	unknown	unknown	unknown
CP025377.1\|AZX89986.1\|1825097_1825421_+\|iron-sulfur-cluster-assembly-protein-IscA	unknown	unknown	gnl\|CDD\|213674
CP025377.1\|AZX89985.1\|1824685_1825096_+\|Fe-S-cluster-assembly-scaffold-IscU	unknown	unknown	gnl\|CDD\|183087
CP025377.1\|AZX89969.1\|1805596_1806046_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239527
CP025377.1\|AZX89975.1\|1811715_1813701_-\|poly-beta-1,6-N-acetyl-D-glucosamine-export-porin-PgaA	unknown	unknown	gnl\|CDD\|274868
CP025377.1\|AZX89979.1\|1817851_1818580_-\|transcriptional-repressor-LexA	unknown	unknown	gnl\|CDD\|234688
CP025377.1\|AZX89970.1\|1806253_1806553_+\|transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|223713
CP025377.1\|AZX89980.1\|1818630_1819833_-\|aspartate/tyrosine/aromatic-aminotransferase	unknown	unknown	gnl\|CDD\|181731
CP025377.1\|AZX89977.1\|1814490_1814976_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759

Protein	Function_ID	Function_description	E-value
CP025377.1\|AZX89984.1\|1823436_1824648_+\|IscS-subfamily-cysteine-desulfurase	gnl\|CDD\|184450	PRK14012, PRK14012, IscS subfamily cysteine desulfurase.	0
CP025377.1\|AZX89971.1\|1806605_1807718_+\|alkene-reductase	gnl\|CDD\|239243	cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include 12-oxophytodienoate reductase, pentaerythritol tetranitrate reductase, morphinone reductase, and related enzymes.	0
CP025377.1\|AZX89974.1\|1809604_1811710_-\|poly-beta-1,6-N-acetyl-D-glucosamine-N-deacetylase-PgaB	gnl\|CDD\|274867	TIGR03938, hypothetical_protein_Pcar_2791, poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB. Two well-characterized systems produce polysaccharide based on N-acetyl-D-glucosamine in straight chains with beta-1,6 linkages. These are encoded by the icaADBC operon in Staphylococcus species, where the system is designated polysaccharide intercellular adhesin (PIA), and the pgaABCD operon in Gram-negative bacteria such as E. coli. Both systems include a putative polysaccharide deacetylase. The PgaB protein, described here, contains an additional domain lacking from its Gram-positive counterpart IcaB (TIGR03933). Deacetylation by this protein appears necessary to allow export through the porin PgaA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0
CP025377.1\|AZX89983.1\|1822906_1823419_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	gnl\|CDD\|273927	TIGR02010, Putative_HTH-type_transcriptional_regulator, iron-sulfur cluster assembly transcription factor IscR. This model describes IscR, an iron-sulfur binding transcription factor of the ISC iron-sulfur cluster assembly system. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Regulatory functions, DNA interactions].	1.00126e-77
CP025377.1\|AZX89987.1\|1825423_1825936_+\|co-chaperone-protein-HscB	gnl\|CDD\|235133	PRK03578, hscB, Fe-S protein assembly co-chaperone HscB.	2.55481e-79
CP025377.1\|AZX89972.1\|1807722_1808361_-\|hypothetical-protein	gnl\|CDD\|372868	pfam13994, PgaD, PgaD-like protein. This family includes the PgaD protein from E. coli. The homopolymer poly-beta-1,6-N-acetyl-D-glucosamine (beta-1,6-GlcNAc; PGA) serves as an adhesin for the maintenance of biofilm structural stability in eubacteria. The pgaABCD operon is required for its synthesis and export. It has been shown that PgaD is essential for this process.	0.00341018
CP025377.1\|AZX89978.1\|1815343_1816294_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.66858e-23
CP025377.1\|AZX89981.1\|1819910_1821947_+\|UvrABC-system-protein-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
CP025377.1\|AZX89973.1\|1808341_1809601_-\|poly-beta-1,6-N-acetyl-D-glucosamine-synthase	gnl\|CDD\|236882	PRK11204, PRK11204, N-glycosyltransferase; Provisional.	0
CP025377.1\|AZX89982.1\|1822199_1822691_+\|low-molecular-weight-phosphotyrosine-protein-phosphatase	gnl\|CDD\|319971	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase. Low molecular weight protein tyrosine phosphatases (LMW-PTP) are a family of small soluble single-domain enzymes that are characterized by a highly conserved active site motif (V/I)CXGNXCRS and share no sequence similarity with other types of protein tyrosine phosphatases (PTPs). LMW-PTPs play important roles in many biological processes and are widely distributed in prokaryotes and eukaryotes.	1.04407e-74
CP025377.1\|AZX89988.1\|1826065_1827928_+\|chaperone-protein-HscA	gnl\|CDD\|235360	PRK05183, hscA, chaperone protein HscA; Provisional.	0
CP025377.1\|AZX89986.1\|1825097_1825421_+\|iron-sulfur-cluster-assembly-protein-IscA	gnl\|CDD\|213674	TIGR02011, Protein_yfhF., iron-sulfur cluster assembly protein IscA. This model represents the IscA component of the ISC system for iron-sulfur cluster assembly. The ISC system consists of IscRASU, HscAB and an Isc-specific ferredoxin. IscA previously was believed to act as a scaffold and now is seen as an iron donor protein. This clade is limited to the proteobacteria. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	4.04388e-54
CP025377.1\|AZX89985.1\|1824685_1825096_+\|Fe-S-cluster-assembly-scaffold-IscU	gnl\|CDD\|183087	PRK11325, PRK11325, scaffold protein; Provisional.	5.84746e-99
CP025377.1\|AZX89969.1\|1805596_1806046_-\|hypothetical-protein	gnl\|CDD\|239527	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).	0.000948481
CP025377.1\|AZX89975.1\|1811715_1813701_-\|poly-beta-1,6-N-acetyl-D-glucosamine-export-porin-PgaA	gnl\|CDD\|274868	TIGR03939, PGA_TPR_OMP, poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA. Members of this protein family are the poly-beta-1,6 N-acetyl-D-glucosamine (PGA) export porin PgaA of Gram-negative bacteria. There is no counterpart in the poly-beta-1,6 N-acetyl-D-glucosamine biosynthesis systems of Gram-positive bacteria such as Staphylococcus epidermidis. The PGA polysaccharide adhesin is a critical determinant of biofilm formation. The conserved C-terminal domain of this outer membrane protein is preceded by a variable number of TPR repeats.	1.10027e-119
CP025377.1\|AZX89979.1\|1817851_1818580_-\|transcriptional-repressor-LexA	gnl\|CDD\|234688	PRK00215, PRK00215, transcriptional repressor LexA.	1.30999e-106
CP025377.1\|AZX89970.1\|1806253_1806553_+\|transcriptional-regulator	gnl\|CDD\|223713	COG0640, ArsR, Predicted transcriptional regulators [Transcription].	1.67046e-14
CP025377.1\|AZX89980.1\|1818630_1819833_-\|aspartate/tyrosine/aromatic-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
CP025377.1\|AZX89977.1\|1814490_1814976_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	7.77331e-19

>CP025377.1|AZX89978.1|1815343_1816294_+|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP025377.1|AZX89977.1|1814490_1814976_+|MarR-family-transcriptional-regulator
MPASQDKPDVPPGPYHFSEQVGHLLRRAYQRHVAIFQQTIPDSKLTAAQFVVLCALRDQGACSLVDVVKATAIDQATVRGVIERLKARKLLAVSHDPADRRKVLVTLTPDGRALVEEMVPFAEQITQSTFGGLNPAERVAIVYLLRKMSDADDLVGRQSES
>CP025377.1|AZX89976.1|1813909_1814146_+|hypothetical-protein
MRRAAKWWGPAATWTLAALLVLLVGHGVVPEAARVSDAPLLHAMAGHAYLLNWAAGLMALIGWGDSLVLYRRTRRRAV
>CP025377.1|AZX89975.1|1811715_1813701_-|poly-beta-1,6-N-acetyl-D-glucosamine-export-porin-PgaA
MNNDQTRRTRPASVRGLRRTRLLVAGLAFVGAAAAAAPSVRDQVQEASRSGAANLALDLATEHRALFTPLEYAQLQHAAIAQRLRWSRAETWNLTGPERFATLDAALADGWQLLDSLPLAPEYASLRTAVISDMIYGLGLRGRYADAIKLYEGLRATNTPVHPYVLVSAGNAYAYEERYDEAIVCYEEALAKAGPGDIDRVPTQESLFFAYMDRGRYEDAEQLLQRIEKTSPQYVENAPVAERPNEDYATAQRLRAQYLMYSGETEAGTLAIDALQHDAPFSSGLRNAAASARLGDARPREAKAAFTTALAERPDDIQAMTGLARASMALREYPEAEAIVTTLSERFPESSSVRNLQRDYEVYQSPLLTMDFGGDIGHGGDNSNNDNSTIANREWSLNTMLYTSPISHNYRLFFHQFTGYADLGDGHKSRVRNGAGLEYRRGSIEASTELHQSTGPSGRFGASANVAWLPSDGWRLAANFDSDSNDLPWKAYRAGIHGWSSGVSARYQPTERTYYDVAYQLQHYSDSNTRQTIGATWFQNLWTVPRHSVSTWTSVAYSNNSKTDTECFSPDHDLTAQVTAMYEWRPWRDGQYAFRQRVYATGGVYNQAEHGNSALWQLRLEQVWDLPRQTSITYGVGYGRHSYDGDPENRTLFYLTLNIPF
>CP025377.1|AZX89974.1|1809604_1811710_-|poly-beta-1,6-N-acetyl-D-glucosamine-N-deacetylase-PgaB
MTAMHRTLLKWFACCALGLLMLPARAYKVDMLPPPDPDDGLTFRVLCMHDVRDNLRASFADMPDQFAIETRTLTDLFEWIRVKGFNLISMQQIIDSRAGVRPLPPRPILLTFDDGYASTYTKVFPLLKKFNYPAVVAVVTSWTDAPAGTKIRLSPKIEVPHDFFMTWAQLREMAQSGLVELASHSHNLHRGVLANPQGNEQPAASSRQYLPASGRYENDAEYRARVRQDLKTSADLIREHTGVTIRSIVWPYGAHNRDTDQVAAEVGLNIGLTLQPGPNTPDVSLTQIRRSLVDYEVNVATVARAMREPVSYHGQVRPIERIVQVDLDYIYDPDPEQQNRNLGQLIDRMKDLAPSAVYLQAFAYPKGDGDITEVYFPNRHLPMRADLFNRVAWQLKTRAGVMVYAWLPVLTFSVPPGNPAYGKVVQSTTRKPGERGLGSPTRLSPFHPDAHRVISEIYEDLAKAAHFDGLLFHDDAVLDDTEDSSPEALATYQGWGLPPDIAAIRADPKLAQQWSKGKIRYLIDFTMHLRHIVSGYQNDRDMVVARNLYAQPVLDPVSEAWYGQSLPEFLKSYDFVALMAMPNMEGAARPEQWMRQLVAAVARQKGLDRTIFELQARDWRVGKPIDTEILRKQMVQLRSLGAINYGYYPDDFIANHPDAEVLRDVMSLKSTLEKRRLTKAQELSRQTTLYGSASQAEPTQR
>CP025377.1|AZX89973.1|1808341_1809601_-|poly-beta-1,6-N-acetyl-D-glucosamine-synthase
MNDSVKSVLSSFVFYYPFFMSYFWIVGGLLHFFLFEQGRKHRATLLPRVPRVAIVVPCYNEGENVAEVIAHLDRMHYPNYRIIAVNDGSRDNTGALLNELAEQYPRLLVVHQSRNEGKAIGLNTAAQLSDAEFLLCIDGDSLPHPDSITYMLTHFLHAGHVGAVTGNPRIRNRSTVLGRMQVGEFSSIVGLIKRTQQLYGKLMTVSGVMTMFRKQALHQVGYWSPDMQTEDIDISWKLQLAGWTLRYEPRALTWILMPETFRGLFKQRYRWARGGIETALKYAPRMLNPRQILMWPIFLEFSLSVLWAYAMLFLICMAVLGQFVALPPAWQFEIFPRWHGTLLFLTCLAQLFAGCIVDRAYDYRIFRYFADAVWYPIAFWIIGMITTVFALPRVLFRRAQSRARWVSPDRGIKHESVDH
>CP025377.1|AZX89972.1|1807722_1808361_-|hypothetical-protein
MKALIIDISASPLREYVHQHGVADGLLYGCWYRIVRPLLVILTWVAFSLYIHHSLVTVGGTAAQIAELLVYITVVATMAAALTAWMIVCRFHGWIRARDNEEVGVGLDPEYALPPRWPLPEGANRLLVDHDEAGAIVQVSAWYVPAAIEPVVAAAMASAVMPEAAPLSEPAPVAAALPDEADELAAWSGPPMQRQPDGRIEPTLHDGRALTL
>CP025377.1|AZX89971.1|1806605_1807718_+|alkene-reductase
MSTLFQPLNAGKLRLANRIVMAPLTRNRSPNAVPPPLTATYYAQRASAGLIITEATAISHQGQGYADVPGLYAPEQLAGWRRVTDAVHAAGGTIVVQLWHVGRISHTTLQPGQGAPVAPSAIRAQARTYLVDAQGKGQFADTSEPRALALDELPGIVEDYRRAARAAIDHGFDGVELHAANGYLLDQFLRSGSNHRDDAYGGSIENRARLLLRALDAVCAEVGADRVGIRLSPVTPANDAHDDQPQPLFEYVLRELARRGLAYVHVIEGATGGDRAYQQGPAPFDYAALKAAYRAAGGAGAWMVNNGYDISLAEQKLSSGQADLVAFGKPFIANPDLVARLRQGAALNEGDRDTFYGGGERGYTDYPALA
>CP025377.1|AZX89970.1|1806253_1806553_+|transcriptional-regulator
MAINTEDILKALAHPARRNILAWLKEPQRHFPQQEHPLELGVCAGQFERCGLSQSTVSTHLAILQRAGLIHSRRVGQWVFYQRNEACIAEFLQTMQAEL
>CP025377.1|AZX89969.1|1805596_1806046_-|hypothetical-protein
MTRPSDIKPREGDTPGTPYAAFVEGAALGPVSFDITPAIVQEYFEASQADPALYRVDVRQAAAPNVILPYMTVPVYQTYPPIQGIVMAELEMSWHRPIWADETTRVTATGTILRKFEKRGRRYVQWEGRFRGADGQPIATLLNTFHVPE
>CP025377.1|AZX89979.1|1817851_1818580_-|transcriptional-repressor-LexA
MRLAFFPWVLQNGAVYPYSPQKRVIAMATKLTERQQEILDLIRQTVARTGFPPTRAEIAQALGFRSPNAAEDHLKALARKGAIELTAGASRGIRLKVPDSATPSAQLTHPLLAQLVLPLVGRVAAGSPILASEHVEREVGVDPGLFAQTPDYLLKVRGMSMRDAGILEGDLLAVKRAAEARNGQIVVARLGDEVTVKRLQRQNGRIELLPENPDFAPIVVANTDEFALEGIAVGLIRTQPLH
>CP025377.1|AZX89980.1|1818630_1819833_-|aspartate/tyrosine/aromatic-aminotransferase
MSTLFASVELAPRDPILGLNEQYNADTRPGKVNLGVGVYYDDEGRIPLLQAVRKAEVARIEAAAARGYLPIEGIAGYNKGAQALLLGADSPLAAEGRVLTAQALGGTGALKIGADFLRQLLPQSKVLISDPSWENHRALFERAGFPVETYAYYDAATHGLNFEAMLAALQAAPEQTIVVLHACCHNPTGVDPTPQQWEQIAAVVKARNLVPFLDIAYQGFGEGLEQDAAVVRMFAELDLTMFISSSFSKSFSLYGERVGALTVVAGSKDEAARVLSQLKRVIRTNYSNPPTHGGTVVSTVLNTPELFALWENELAGMRDRIRLMRKELVEKIKTQGVAQDFSFVLAQRGMFSYSGLTAAQVDRLREEHGIYAVSSGRICVAALNSRNIDAVAAGIAAVLK
>CP025377.1|AZX89981.1|1819910_1821947_+|UvrABC-system-protein-B
MTAPGFVEFPDSPFHLYQPYPPAGDQPGAIDALTEGVSDGLMFQTLLGVTGSGKTYTMANMIARLGRPALVLAPNKTLAAQLYAEMREFFPRNAVEYFVSYYDYYQPEAYVPTRDLFIEKDSSINEHIEQMRLSATKSLLERRDTVIVGTVSCIYGIGNPGDYHAMVLILRTGDRISRREVLARLVAMQYTRNDADFTRGVFRVRCETIDIFPAESPELALRLTLFDDEIESLELFDPLTGRVRQKLPRFTVYPGSHYVTPRETVLRAIETIKEELRERLAQLIADGKLVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLIDYLPADALMFIDESHVTIGQLGGMYRGDRSRKETLVQYGFRLPSALDNRPLRLEEFEARMRQCVFVSATPAAYEQEHADNVVEQVVRPTGLVDPIVEVRPAHTQVDDLLGEIHKRAALQERVLVTTLTKRMAEDLTDFLSEHGVRVRYLHSDIDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGRAILYADRITDSMRRAIDETERRRAKQIQHNTDHGITARGVSKAVRELIDGVVAPAGHDALESAVPAEVLTDEKAMAREIRRLEKLMMDHARNLEFEQAAAARDALNALKSRLLLDGVGWSG
>CP025377.1|AZX89982.1|1822199_1822691_+|low-molecular-weight-phosphotyrosine-protein-phosphatase
MMTKVLFVCMGNICRSPSAEGVFRYLVNDAGMGDVVRVDSAGTHAFHIGEAPDARAQAAARKRGYDLTHCAARQVTADDFREFDLILAMDWDNLAALQQQCPKAYQHKLMLLMRFANEFEEATVPDPYYGGPEGFGKVLDYLEDACQGVLELVRKRATQYQAA
>CP025377.1|AZX89983.1|1822906_1823419_+|Fe-S-cluster-assembly-transcriptional-regulator-IscR
MRLTTKGRFAVTAMIDLAMRQHSGPVTLAAISQRQNISLSYLEQLFGKLRRHELVDSVRGPGGGYSLARLARNVTVADIIFAVDEPLDATSCGGKRDCTSGNDGKPGKCMTHELWTTLNRKMVDYLDSVSLQDLVDQQRVRQLQEAANQAQGCSAVRVNRSTPVAANATA
>CP025377.1|AZX89984.1|1823436_1824648_+|IscS-subfamily-cysteine-desulfurase
MSNRPIYLDYSATTPVDPSVVEKMIPWLYESFGNPASRSHAFGWEAEDAVEKAREEVAKLVNADPREIVWTSGATESDNLAIKGAANFYAERGKHIITVKTEHKAVLDTCRELERQGFEVTYLDVQDDGLLSLDAFKAALRPDTILVSVMMVNNEIGVIQDIAALGEICREKGIIFHVDAAQATGKVEIDLQKLKVDLMSFSAHKTYGPKGIGALYVRRKPRVRIEAQMHGGGHERGFRSGTLATHQIVGMGEAFRLAREEMGTENERVRMLRDRLLAGLTQIEEVYVNGSMEHRVPHNLNISFNYVEGESLIMAIKELAVSSGSACTSASLEPSYVLRALGRNDELAHSSIRFTLGRFTTEQEIDFTIELIKSRVGKLRDMSPLWEMAQEGIDLNSVQWAAH
>CP025377.1|AZX89985.1|1824685_1825096_+|Fe-S-cluster-assembly-scaffold-IscU
MAYSSKVLDHYENPRNVGSFDKGDDSVGTGMVGAPACGDVMKLQIKVNEAGVIEDARFKTYGCGSAIASSSLVTEWVKGKTLDEAMNIRNTQIAEELALPPVKIHCSILAEDAIKAAVQDYKTKHGAETPEAVAAN
>CP025377.1|AZX89986.1|1825097_1825421_+|iron-sulfur-cluster-assembly-protein-IscA
MAVTLTQSAANHVGRYLQKRGKGIGLRLGVRTTGCSGMAYKLEYVDEQAADDVVFDSFGVKVFIDPKSLAYLDGTELDYAREGLNEGFRFSNPNEKATCGCGESFTV
>CP025377.1|AZX89987.1|1825423_1825936_+|co-chaperone-protein-HscB
MAADDHFSLFGLPTRFALDPVQLEQAWRAVAARVHPDRYATASAAERRVAMQWAARANEAYRQLRDPMLRARYLCEQAGVDLQTESNTAMDPAFLMQQMEWREMLDDARRDPAAFAALRAELEQARLRMQQTLSELIDERGDYQQAGTKVREWMFVEKLAQELSAAQPMQ
>CP025377.1|AZX89988.1|1826065_1827928_+|chaperone-protein-HscA
MALLQISEPGDSPAPHQRKLAVGIDLGTTNSLVAAVRSSVPEVLADAQGQVLLPSAVRYLDGGAVRIGREALLEQARDPLNTIVSVKRFMGRSAADAAASGAPYEFVDAPGMVRLRTVQGDLSPVEVSAQILAVLRQRAEDVLGDDLVGAVITVPAYFDDAQRQATRDAARLAGLNVLRLLNEPTAAAIAYGLDQAAEGIYAVYDLGGGTFDISILRLTQGVFEVIATGGDTALGGDDFDSAIVAHACAGEDVAALPVADRRALLVAARAAREALTDQAQAPFEVTLRDGRAIQATLTRAQFEQLAEPLVGRTLDSARRALRDAGLAVGDVRGVVMVGGATRMPVVRQQVGALFGTEPLTNLDPDQVVALGAALQANLLAGNRALGEDWLLLDVIPLSLGLETMGGLVERIIPRNSTIPVARAQEFTTFKDGQTAMSVHVVQGERDLVSDCRSLARFELRGIPPMVAGAARIRVTFQVDADGLLSVTAREQSTGVEAAVAVKPSYGLSDDEIARMLADSVTQADSDARARMLREQQVEARQLVESVGAALAADGDLLDPAERATVDQRLQAAAQAQSLDDVEAVRAAVQALSDATEEFAARRMDRSIRSALAGRKLDELA

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Crispr_ID: CP025377_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025377_5

3431418-3431527

Orphan

Consensus_repeat	Method
TTGACTGCCAAGACGGTATCTGTCCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025377_5

>merge|CP025377|5|3431418-3431527|CRISPRCasFinder
TTGACTGCCAAGACGGTATCTGTCCCCGCAGGGAGGGTGCCTGTCCCCGCCGGGACAGGCACACTGCTGTACGCCATCGACGCTTGACGGCCAAGACGGTATCTGTCCCC

>CP025377|5|5|3431418-3431527|CRISPRCasFinder
TTGACTGCCAAGACGGTATCTGTCCCC	GCAGGGAGGGTGCCTGTCCCCGCCGGGACAGGCACACTGCTGTACGCCATCGACGC
TTGACGGCCAAGACGGTATCTGTCCCC

Protein	Signature genes	Signature genes Name	Protein_function
CP025377.1\|AZX91294.1\|3436265_3436967_+\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|181883
CP025377.1\|AZX91281.1\|3417717_3418086_-\|hypothetical-protein	unknown	unknown	unknown
CP025377.1\|AZX91287.1\|3427064_3427865_+\|hydroxyacylglutathione-hydrolase	unknown	unknown	gnl\|CDD\|274569
CP025377.1\|AZX91291.1\|3432058_3432739_+\|DUF533-domain-containing-protein	unknown	unknown	gnl\|CDD\|377342
CP025377.1\|AZX91299.1\|3443782_3444598_+\|septum-site-determining-protein-MinD	unknown	unknown	gnl\|CDD\|225447
CP025377.1\|AZX91283.1\|3421989_3422868_+\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|366126
CP025377.1\|AZX91293.1\|3433810_3434761_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025377.1\|AZX91292.1\|3432743_3433742_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
CP025377.1\|AZX91289.1\|3429379_3430165_+\|enoyl-[acyl-carrier-protein]-reductase-FabI	unknown	unknown	gnl\|CDD\|180789
CP025377.1\|AZX91280.1\|3416780_3417731_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025377.1\|AZX91296.1\|3439460_3440801_-\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587
CP025377.1\|AZX91282.1\|3418084_3421063_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375438
CP025377.1\|AZX91298.1\|3442791_3443670_+\|septum-site-determining-protein-MinC	unknown	unknown	gnl\|CDD\|178806
CP025377.1\|AZX91297.1\|3440916_3442680_+\|glutamine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235424
CP025377.1\|AZX91295.1\|3436966_3438391_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|236531
CP025377.1\|AZX91290.1\|3431528_3431921_-\|OsmC-family-peroxiredoxin	unknown	unknown	gnl\|CDD\|224679
CP025377.1\|AZX91284.1\|3424816_3425767_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025377.1\|AZX91288.1\|3427875_3429285_+\|lytic-transglycosylase	unknown	unknown	gnl\|CDD\|182727
CP025377.1\|AZX91285.1\|3425763_3426231_-\|ribonuclease-HI	unknown	unknown	gnl\|CDD\|178927
CP025377.1\|AZX91286.1\|3426273_3427044_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777

Protein	Function_ID	Function_description	E-value
CP025377.1\|AZX91294.1\|3436265_3436967_+\|DNA-binding-response-regulator	gnl\|CDD\|181883	PRK09468, ompR, osmolarity response regulator; Provisional.	4.05363e-90
CP025377.1\|AZX91296.1\|3439460_3440801_-\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	2.21087e-123
CP025377.1\|AZX91287.1\|3427064_3427865_+\|hydroxyacylglutathione-hydrolase	gnl\|CDD\|274569	TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753). [Cellular processes, Detoxification].	2.85848e-146
CP025377.1\|AZX91291.1\|3432058_3432739_+\|DUF533-domain-containing-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	5.6465e-62
CP025377.1\|AZX91299.1\|3443782_3444598_+\|septum-site-determining-protein-MinD	gnl\|CDD\|225447	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning].	7.6448e-163
CP025377.1\|AZX91283.1\|3421989_3422868_+\|fatty-acid-desaturase	gnl\|CDD\|366126	pfam00487, FA_desaturase, Fatty acid desaturase.	2.20669e-12
CP025377.1\|AZX91293.1\|3433810_3434761_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	7.3142e-23
CP025377.1\|AZX91292.1\|3432743_3433742_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	7.76869e-129
CP025377.1\|AZX91289.1\|3429379_3430165_+\|enoyl-[acyl-carrier-protein]-reductase-FabI	gnl\|CDD\|180789	PRK06997, PRK06997, enoyl-[acyl-carrier-protein] reductase FabI.	1.22848e-177
CP025377.1\|AZX91280.1\|3416780_3417731_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	5.27808e-22
CP025377.1\|AZX91282.1\|3418084_3421063_+\|hypothetical-protein	gnl\|CDD\|375438	pfam17936, Big_6, Bacterial Ig domain. This domain is found in a wide variety of extracellular bacterial proteins often in multiple tandem copies.	1.32844e-07
CP025377.1\|AZX91298.1\|3442791_3443670_+\|septum-site-determining-protein-MinC	gnl\|CDD\|178806	PRK00030, minC, septum site-determining protein MinC.	3.47756e-166
CP025377.1\|AZX91297.1\|3440916_3442680_+\|glutamine--tRNA-ligase	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
CP025377.1\|AZX91295.1\|3436966_3438391_+\|ATP-binding-protein	gnl\|CDD\|236531	PRK09467, envZ, osmolarity sensor protein; Provisional.	3.78414e-42
CP025377.1\|AZX91290.1\|3431528_3431921_-\|OsmC-family-peroxiredoxin	gnl\|CDD\|224679	COG1765, COG1765, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones].	4.86152e-16
CP025377.1\|AZX91284.1\|3424816_3425767_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.05216e-23
CP025377.1\|AZX91288.1\|3427875_3429285_+\|lytic-transglycosylase	gnl\|CDD\|182727	PRK10783, mltD, membrane-bound lytic murein transglycosylase D; Provisional.	5.28635e-76
CP025377.1\|AZX91285.1\|3425763_3426231_-\|ribonuclease-HI	gnl\|CDD\|178927	PRK00203, rnhA, ribonuclease H; Reviewed.	4.07937e-102
CP025377.1\|AZX91286.1\|3426273_3427044_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	9.0439e-10

>CP025377.1|AZX91289.1|3429379_3430165_+|enoyl-[acyl-carrier-protein]-reductase-FabI
MGFLAGKRILMTGVLSNRSIAYGIARACRDQGADLAFTYVGDRFKERITEFAASFGSDIVLPCDVAEDSQIDAAFAELGKRWDGLDGLVHAIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPAMAKAALPLMEGRKGSVLTLSYLGSERVVANYNTMGLAKASLEASVRYLATALGPRGIRANAISAGPIKTLAASGIKDFSSILKFVEANAPLRRNVTIEDVGNVAAFMLSDLAAGITGEITHVDAGFSTVVPGMEN
>CP025377.1|AZX91288.1|3427875_3429285_+|lytic-transglycosylase
MRFLRLLLPLFLAVLAGCAGTAKQNQAAGPSSNRYIAQDTSRTVDLTSPPSDAWDRIRRGFAIPNLNTDLAQEWTDYYASHPESVQRMAERAGKYLYFIVDEINRRGLPTELALLPFVESAYNPTALSRSQASGLWQFIPTTGQHFNLKQDWWRDERRDPIASTYAALDYLEKLFEMQGDWYLALASYNWGEGSVQRAMAKNEAAGLSTDYLSLNMPDETRNYVPKLQAIKNIIANPRKFAVVLPPVENTPYFVAVQKNRDIDIELAARLAEMPLDEFKALNPAFNRPLIRGEHAPTLLLPADRADRFNANLQNYKGDLSSWKVYHTRRGESYAAIAKRFGISEAKLRASNDIGSKRKVAADQALLIPGVPSGDGAANIQLASLSPPVGALDNVGEPRAAAAPRGKAPARVASARPNVRTHKVSSGDTLFGLARKYGTSVGALRALNNLKGNNLKLGSQLRIPGTGTRG
>CP025377.1|AZX91287.1|3427064_3427865_+|hydroxyacylglutathione-hydrolase
MQTAPPLSAVVPLPAFSDNYIWALAHEGQAAVVDPGDAAPVLRWLRATGATLRAILLTHHHPDHVGGVLELVQATGATVYGPAGETLPHCDVRLAEGDRVTLPELALALEVLDVPGHTAGHIAYTGRAAGVERVLFCGDTLFAGGCGRLFEGTPAQMLDSLEKLSALPADTQVCCAHEYTLANLRWALAVEPANRTLQQWYQRAQELRNEGTPTLPSTIGQERETNPFLRTPHAAVAHAAAVWSGRSLATPVEVFAALRQWKNNFK
>CP025377.1|AZX91286.1|3426273_3427044_-|class-I-SAM-dependent-methyltransferase
MAEETPPIVELAEWFQTPPGQYVLAWEQAQFDEAVADIFGYYAWQVGLAEPNLLRANRMPFKAWVGAGVPPPELAQGWQACVAAAPEALPFESQSVDLLVLPHAFECAEAPHLVLREVERVLVPEGRVVISGFNPWSLWGARNLMPGMEAWLPLPLSAQVALPRLKDWFKLLSFEVERGRFGCYAPACRTDKWLRRWRFMERYGQRWWGLGGAVYVVTATKKVAAMRLIGPAWKTRRKRAQAASVVVNRQADDPGR
>CP025377.1|AZX91285.1|3425763_3426231_-|ribonuclease-HI
MQNLEGSGDGQQVEMWTDGACKGNPGPGGWGVLMRAGQHEKTMHGGERQTTNNRMELMAVIEGLRALKRPCRVTIHTDSQYVMKGMTEWLANWKRRGWRTADKKPVKNVELWQALDEQVGRHQVQWRWVRGHAGDPGNERADALANQGMEAARGR
>CP025377.1|AZX91284.1|3424816_3425767_+|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>CP025377.1|AZX91283.1|3421989_3422868_+|fatty-acid-desaturase
MVRPAEWLRHRRDWQSVLYLAALPALAAWQWVHGWHWALYAPMLFLTLGVGVIHHNHAHRRMWRPRWLNRLTDFWLTLLQGHPTFVFHAAHNANHHRYKHGPRDVARTYRFGGDTNHLAGYLLHPLQAVVVLYPLFLASLRRLRSRRPGVWRYCLRQYAAWLGLWGGLLALDPGKAFWLVIVPQLHGLHWLLATNYLQHAHADGGPGRHAALSYARNFEGWVNPLLFNIGLHTAHHENPRAHWSELRALHWQHYRDRVPSRLNERGLAPYMARVFVLGLFSRRCRTHTLMRP
>CP025377.1|AZX91282.1|3418084_3421063_+|hypothetical-protein
MQLWLPDGTATSVRANAAGGFEASSAGDMTSGLIRARATDRYGDTSQEVTYAYTDTVDKTAPVLSIAGVATDEATGRVTVTGRSEPDAQVTIRFPGGGRKTVRADANGAYRVRSDGDLPAGVIVVQAADAAGNSTQAQQAYQDTVDRTAPEPVQIALDTDAATGRLTVSGQAEPGGSVTVTWPDGTTQTVRVDADGGFRVTSAGDAAQGDVVVVVADQAGNRAAPVRAHYADPVDRTAPMTPTVRHATDAQTGRVTVMGRTEAGALVTVQFPDGSSKTVRAQNDGGYAATSDTDMVSGPIVVSAGDADGNRTPAQQVMYTDTLDKTAPASPSLTVREDAASGRATVTGQAEPGAAVRVVFPNGEAQTVTAGSDGAYSVTSTADMVAGEITVVAADASGNQSAPARTVFADAVDKTAPAAPTLALSEAADSGRLTVSGRTEPGASVRVTFPDGETVTVTAKADGTYTATSRADMIGGNVTVVATDTAGNAAAPVRAAYADTVDRTPPVLDTPVLNVASDSGRVTVTGVTEPGARVQVAIPGESLQTVTADSAGRYRAVSPGDVLQSGTVRVIATDAHGNASAPRDVPYQDAVDRTAPPLTIEAAVEQARTGVVNVSGKTEPNLMVSATFPDGQTAQARADGQGRYQLASPADVARSGRIAVSASDAAGNRAAARAEFTDQVDKTAPAVTIRAVTEQAGTGVATVSGATEPGATVSVTFPDGQVARATADRSGAYTVHSARDVTARGNISVIATDAAGNASPSVSRQFSNTVADTVPPSLTIAMVTTDPGNGRITVSGVTEAGARVHVVFPGGASDTVTADSKGGYRATSAGDVGSGAVTAQATDASANRSPLKTYAYTDAWQPRQLSAKDFSQSRYFVPLTTRGGTDNEPLLRITTNQQIPTAELRVALKPYKTEDRAGRLVREAITLKWGNAPGVGGDARALHFYVPDSAKAKLRKELTEVERSNDYKFWIEFTDTRFGGVARLYIKVISTL
>CP025377.1|AZX91281.1|3417717_3418086_-|hypothetical-protein
MHVGQGLGDAVHGNAPGGRVGANLGNAQRQDDFLAPRIEHDAVLAPDEILQACAPVEWRGRVLRAAAQLPRQGLAQIQPHAQLDASCEDSIGCMHGSSEPDLRNWKSPPPQFTQGARPDEHP
>CP025377.1|AZX91280.1|3416780_3417731_-|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIPPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>CP025377.1|AZX91290.1|3431528_3431921_-|OsmC-family-peroxiredoxin
MTIQVRANTPGGLQYTATAEGHELPLAMPQPQGEGPDPHDYFDTALGGCKALTLMVYAQRKGLPLQAVDVDVVRDASEERKGIYRLTAKLKLHGDLDDAQIDELLKVADKCPLHKLMTATDIQVSTIVVE
>CP025377.1|AZX91291.1|3432058_3432739_+|DUF533-domain-containing-protein
MSARQLLDQLLQSGQSLMQGAGAQAQQATQGGKGTFLAGLGGGALGAGALGLLLGSKKARKIGGKVAMYGGMAALGALAYRAYDQYQRNQAGGAAAPAPQTLDRLPPAPAEQHSNAVLVAMIGAAKADGHIGPDERQLLETELAKLSGDAGDRAWLEAELARPLDPAVIAQQARTPEMGAEMYLASLLVADEQSFMERAYLDELARQLKLPAELKQQLEAQVPAAA
>CP025377.1|AZX91292.1|3432743_3433742_-|tripartite-tricarboxylate-transporter-substrate-binding-protein
MRPVAPMTTMKSQVSILLAGCLLGAGAAAAQAPATYPDHAITIVVTFPPGGGTDLLARKLGAAMQQRLGQPVVVENRPGASGNIGARAVAEARPDGYTLLMVNSSFAVNPGVFRNLDFSPTRDFTAVINVAYVPSVIVTAEPAGDAGLPERLRQADTQSRTLAFASCGNGTPQHLAGEMLRQASGAWLQHVPYRGCGPALTDVLSRQVPLGIVTASSAAPFIHAGKLRALAVTSAQRSPLLPDVPTVAEQGAPGYELDQWHGLLAPAGTPPAVIQRLYEALSAIVAEPAMRRELESLGFNPVSEGPERFEALVQADIARFAALTARMGLRAD
>CP025377.1|AZX91293.1|3433810_3434761_-|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWQRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP025377.1|AZX91294.1|3436265_3436967_+|DNA-binding-response-regulator
MDNPHTKLLVVDDDPALRQLLADYLNRHGYDTLLAPDASDLAARITRYAPDLLVLDRMLPGGDGADACRRLRDQGEDIPVILLTARDEAVDRIIGLEAGADDYLGKPFDPRELLARIEAVLRRKRGPSALTKDAPVSFGPFVFDPATRQLLRDDTPVKLTGGEINLLEALVRNAGKPLSRERLLALARDDDGGERNDRAIDIAILRLRRAIEEDPKQPRWIQTVWGIGYRFSP
>CP025377.1|AZX91295.1|3436966_3438391_+|ATP-binding-protein
MKLLRLPAPRSLRMRLILLVLGSVLLAQAATLATVSYFRHKFMEDVAIDYIATTIRTLRASLSQVPTDERAEFVRQASGNQWRLWSRSLPADARLQRWHRGPQEDEAERERMRREYERRHPPPDDIRRDLRGLVSELNERLSDGTRVALSRGPRPEIFISLAPSPSPDDAPPLREWLVIPLERLDPPVATPLIAFWVGGIGLVLLLAAWFSWHITRPLTRLADAADQLAAGQPQRVEPSGPHETRVLGERFNAMLDALAESDSVRRTLLSGLPHDLKGPLSRMWLRIEMADDPTLKEGLRKDLQDMQHMVDQFIGFVRGTDPAAYRYAPLALGEWLAERVGAWQGAGTDIRLQAPDNGALGIQADAVALGRLLDNLIGNALHHGAPPVEVSLRRDADMAVLEVSDHGPGIAPERRTEALRPFARLDDARTRTGNVGLGLALAEAIARAHGGGLELRQAPSGGLLVRITLPLAKA
>CP025377.1|AZX91296.1|3439460_3440801_-|cytochrome-ubiquinol-oxidase-subunit-I
MNIPPLLLARAQFTASLGFLALFLAISLALAWLLLFFKLRARWSGQSGWTAAYRFWVRIFALAFVLALACAVPVLIQLGSLWSGLMDKIGNLAGPLLGYGVLSIFIVKSCFLGVMLFGQRRVSDAAHTLAVLMVAIGQLVAVGWVLALFSWLQTPDGAVLIDGRYQVYDWRAVVLNPSFGWRLGLTVLGAFLTAGFLMLGVTAMQALRRPLDDGERHAFRAGLTVALLASLLLGPVAAGMGEVTARLQPAKAAAAAGFWHSGAEPELVVFGWPSARAQANLAAVSLAGAGGRWLHRDASLGYLGLDKFSGMQPPVAFTFWSLRLALGLGLLMLAASCATLALTCRRGFDPVALPRWWLRVLSLLMFAGALGVVATWCYDLAGMQPYAVNRAVTQSEVLGPVTTPALLYSLAGHIALYAVLLAAFVGMLFHAARYGVVPVRKTGGSS
>CP025377.1|AZX91297.1|3440916_3442680_+|glutamine--tRNA-ligase
MTHAPTPPAASNFLRPIIEDDLQANRFQGKLWAGKPGPAALQAQGQPDPARIRTRFPPEPNGYLHIGHAKSICVNFGLARDYGGVCHLRFDDTNPEKEEQEYVDAIIEAVHWLGFDWQADGNDNLYFASDYFEFMYEFAEALVQAGHAYVDEQSAEEIRASRGTLTEPGTDSPWRDRPADESLLRLREMRDGKHPDGSLVLRARIDMASPNINLRDPVMYRVRHATHHRTGNAWCIYPMYSWAHPVEDALEGITHSICTLEFEDQRPFYDWILARLAELGKLARPLPHQYEFARLNLTYVVTSKRKLLQLVREGYVDGWDDPRMPTLFGLRRRGYTPSSIRLFCDRTAVSKSDSRIDYSLLEQAVRDDLDPVAPRSVAVLDPLKLVITNYPEGRSETCSAPRNPHDPQAGVREFPFTRELWIEQDDFREEPPKKYFRLFPGNTVRLKYGYVVRCTGFTKDESGKVVEVQAEYLPDTKSGTPGADSVKVKGNITWVSAAHAVPAQVHLYDRLFADAHPDGGDKDFLACLNPNSKQTVQAWLEPGIEAVPGATWQFERLGYFTVDSKDSRPEAPVLNRIVTLRDSWQAA
>CP025377.1|AZX91298.1|3442791_3443670_+|septum-site-determining-protein-MinC
MNTESLALDFKSATLYAIRVVLHDADTTRLRAALDKRMADAGSFFENEPVVIDATRVDAPVDWPALLQALADHNLPPIGVVAEGANLQGARDAGLVPVELSTSVARAPQVIDTAPPNDVATPVPSVPEATAEATAKAGPQDDEADGEQADEAPAHNPESVPTRAARETTEANRPTATPPQSSSALVITKPLRSGQRVYARHTDLIVIGMVSQGAEVIADGNVHVYGPLRGKAMAGARGDTSARIFTTQLDAELLAVAGVYRVVEDKLDRALHNQPALVRLDGDTLRIEALKG
>CP025377.1|AZX91299.1|3443782_3444598_+|septum-site-determining-protein-MinD
MTRIVVVTSGKGGVGKTTTSASFSAGLAMRGHKTAVIDFDVGLRNLDLIMGCERRVVYDFVNVIQGEASLKQALIKDKQLENLFILPASQTRDKDALTQEGVEKVIDELKEMGFDYIVCDSPAGIEAGALMAAYFADDALVVTNPEVSSVRDSDRILGILAAKSRRAVQGDEPVKEYLLLTRYNPKRVNDGEMLSLSDIEDILRIKLIGVIPESEAVLQASNQGLPAIHLKDTDVSEAYKDVVARFLGEERSLRFTDYEKPGLLKRLFGGK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 70443

Natrialba_phage(12.5%)

protease,transposase,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX88488.1\|0_1920_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
AZX88489.1\|1916_2609_+	ribosomal RNA small subunit methyltransferase G	NA	NA	NA	NA
AZX88490.1\|2605_3403_+	ParA family protein	Q8JL10	Natrialba_phage	5.6e-20	34.9
AZX88491.1\|3409_4171_+	N-acetyltransferase	NA	NA	NA	NA
AZX88492.1\|4214_5132_+	chromosome partitioning protein ParB	I3NLC2	Bifidobacterium_phage	1.9e-16	38.1
AZX88493.1\|6721_7912_+	elongation factor Tu	A0A1V0SLW6	Klosneuvirus	3.1e-14	29.2
AZX88494.1\|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA
AZX88495.1\|8540_9074_+	transcription termination/antitermination protein NusG	G3MAW2	Bacillus_virus	1.4e-11	30.5
AZX88496.1\|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA
AZX88497.1\|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA
AZX88498.1\|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA
AZX88499.1\|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA
AZX88500.1\|11661_15774_+	DNA-directed RNA polymerase subunit beta	A0A0N9R0J7	Chrysochromulina_ericina_virus	2.4e-21	28.8
AZX88501.1\|15773_20018_+	DNA-directed RNA polymerase subunit beta'	A0A2I7QNZ7	Vibrio_phage	3.5e-68	24.7
AZX91870.1\|20126_20531_-	lipoprotein	NA	NA	NA	NA
AZX88502.1\|20771_21947_+	hypothetical protein	NA	NA	NA	NA
AZX88503.1\|24352_25459_-	peptidoglycan-binding protein	NA	NA	NA	NA
AZX88504.1\|26470_27286_+	DNA-binding response regulator	NA	NA	NA	NA
AZX88505.1\|27282_28233_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX88506.1\|28314_28650_-	CoA transferase	NA	NA	NA	NA
AZX88507.1\|28674_29109_-	hypothetical protein	NA	NA	NA	NA
AZX88508.1\|29141_30368_-	thiolase family protein	NA	NA	NA	NA
AZX88509.1\|30364_30862_-	dehydratase	NA	NA	NA	NA
AZX91871.1\|31069_31978_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZX88510.1\|32163_33006_+	enoyl-CoA hydratase	NA	NA	NA	NA
AZX88511.1\|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA
AZX88512.1\|34625_35576_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX88513.1\|35572_36763_-	MFS transporter	NA	NA	NA	NA
AZX88514.1\|36949_37924_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
AZX88515.1\|37925_40064_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
AZX88516.1\|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
AZX88517.1\|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AZX88518.1\|41318_42212_+	M48 family peptidase	NA	NA	NA	NA
AZX88519.1\|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA
AZX88520.1\|42687_43218_+	peptide deformylase	E3SLL2	Synechococcus_phage	3.7e-12	35.4
AZX88521.1\|43346_43646_-	DUF1974 domain-containing protein	NA	NA	NA	NA
AZX88522.1\|45112_45748_+	hypothetical protein	NA	NA	NA	NA
AZX88523.1\|45719_45956_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AZX88524.1\|46083_46977_+	hypothetical protein	NA	NA	NA	NA
AZX88525.1\|48146_49394_+	homoserine O-acetyltransferase	NA	NA	NA	NA
AZX88526.1\|49390_50005_+	methionine biosynthesis protein MetW	NA	NA	NA	NA
AZX88527.1\|50140_51091_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX88528.1\|51133_52390_+	MFS transporter	NA	NA	NA	NA
AZX88529.1\|53621_54356_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA
AZX88530.1\|54361_54952_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.2e-20	33.6
AZX88531.1\|54976_55666_-	amino acid ABC transporter permease	NA	NA	NA	NA
AZX88532.1\|55662_56424_-	amino acid ABC transporter permease	NA	NA	NA	NA
AZX88533.1\|56503_57403_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX88534.1\|57496_58447_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX88535.1\|59247_60474_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
AZX88536.1\|60473_60893_-	transcriptional regulator	NA	NA	NA	NA
AZX88537.1\|61076_62018_-	hypothetical protein	NA	NA	NA	NA
AZX88538.1\|62441_63278_-	hypothetical protein	NA	NA	NA	NA
AZX88539.1\|63472_64054_-\|protease	protease	NA	NA	NA	NA
AZX88540.1\|64066_64384_-	ferredoxin	NA	NA	NA	NA
AZX88541.1\|64487_65546_-	oxidoreductase	NA	NA	NA	NA
AZX88542.1\|65580_66852_-	TRAP transporter large permease	NA	NA	NA	NA
AZX88543.1\|67481_68663_-	hypothetical protein	NA	NA	NA	NA
AZX88544.1\|69084_70035_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX88545.1\|70128_70443_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

77633 : 136107

Planktothrix_phage(22.22%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX88551.1\|77633_78584_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91873.1\|78658_79603_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX88552.1\|79599_81474_-	polysaccharide biosynthesis protein	A0A2P1ELS8	Moumouvirus	2.0e-23	26.9
AZX88553.1\|82821_83526_-	DUF2837 domain-containing protein	NA	NA	NA	NA
AZX88554.1\|83522_84629_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
AZX88555.1\|84890_85484_-	sugar transferase	NA	NA	NA	NA
AZX88556.1\|85480_86713_-	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	NA	NA	NA	NA
AZX88557.1\|86730_87990_-	glycosyltransferase WbuB	NA	NA	NA	NA
AZX88558.1\|88013_89102_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A0N9R0B2	Chrysochromulina_ericina_virus	4.8e-46	36.3
AZX88559.1\|89109_90210_-	aminotransferase DegT	A0A2K9L0G1	Tupanvirus	3.3e-31	29.7
AZX88560.1\|90213_90789_-	N-acetyltransferase	NA	NA	NA	NA
AZX88561.1\|90792_91845_-	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
AZX91874.1\|91975_92983_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA
AZX88562.1\|92984_94271_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA
AZX88563.1\|94287_94443_-	hypothetical protein	NA	NA	NA	NA
AZX88564.1\|94467_95271_-	type III pantothenate kinase	NA	NA	NA	NA
AZX88565.1\|95267_96134_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
AZX88566.1\|96202_97339_+	ABC transporter permease	NA	NA	NA	NA
AZX88567.1\|97338_98178_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.1e-21	32.4
AZX88568.1\|99110_99713_+	hypothetical protein	NA	NA	NA	NA
AZX88569.1\|99742_100396_+	alpha/beta hydrolase	NA	NA	NA	NA
AZX88570.1\|100528_101785_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	6.2e-66	40.5
AZX88571.1\|101787_102732_+	D-amino acid aminotransferase	NA	NA	NA	NA
AZX88572.1\|102807_103083_+	DUF493 domain-containing protein	NA	NA	NA	NA
AZX88573.1\|103090_103753_+	octanoyltransferase	NA	NA	NA	NA
AZX88574.1\|103814_104816_+	lipoyl synthase	NA	NA	NA	NA
AZX88575.1\|104830_105379_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	3.7e-47	53.4
AZX88576.1\|105436_106333_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
AZX88577.1\|106329_107391_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.6e-78	44.8
AZX88578.1\|107426_108377_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX88579.1\|109276_110470_+	cystathionine beta-lyase	NA	NA	NA	NA
AZX88580.1\|110551_111181_-	thiol:disulfide interchange protein DsbA	NA	NA	NA	NA
AZX88581.1\|111242_111926_-	SPOR domain-containing protein	NA	NA	NA	NA
AZX88582.1\|111935_113618_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
AZX91875.1\|113905_114253_+	DUF1840 domain-containing protein	NA	NA	NA	NA
AZX88583.1\|114343_114661_+	hypothetical protein	NA	NA	NA	NA
AZX91876.1\|114943_115960_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AZX88584.1\|116035_116836_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
AZX88585.1\|116832_117708_-	sugar ABC transporter permease	NA	NA	NA	NA
AZX88586.1\|117718_119011_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX88587.1\|119053_120094_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.0e-22	33.7
AZX88588.1\|120199_121021_-	phosphodiesterase	NA	NA	NA	NA
AZX88589.1\|121121_122072_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX88590.1\|122170_123076_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.8e-21	31.7
AZX88591.1\|123072_123906_-	ABC transporter permease	NA	NA	NA	NA
AZX91877.1\|124742_125753_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX91878.1\|125749_126139_-	hypothetical protein	NA	NA	NA	NA
AZX88592.1\|127032_128286_+	amidase	NA	NA	NA	NA
AZX88593.1\|128376_130077_-	2-isopropylmalate synthase	NA	NA	NA	NA
AZX88594.1\|130503_131151_-	hypothetical protein	NA	NA	NA	NA
AZX91879.1\|131149_132589_+	RNA polymerase sigma-54 factor	NA	NA	NA	NA
AZX88595.1\|132681_132984_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA
AZX88596.1\|133011_133890_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZX88597.1\|135156_136107_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

164891 : 225401

Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX88620.1\|164891_165842_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX88621.1\|167285_168188_-	hypothetical protein	NA	NA	NA	NA
AZX88622.1\|168165_168795_-	LemA family protein	NA	NA	NA	NA
AZX88623.1\|169125_170508_+	RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.3e-42	29.5
AZX88624.1\|170541_171171_+	threonine transporter RhtB	NA	NA	NA	NA
AZX88625.1\|171219_172827_+	peptide chain release factor 3	A0A2K9L6L3	Tupanvirus	9.3e-14	37.8
AZX88626.1\|172851_173535_+	hypothetical protein	NA	NA	NA	NA
AZX91882.1\|173616_174093_-	bacterioferritin	NA	NA	NA	NA
AZX88627.1\|174299_175250_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX88628.1\|176365_176893_+	lipoprotein	NA	NA	NA	NA
AZX88629.1\|176984_177800_+	lipoprotein	NA	NA	NA	NA
AZX88630.1\|177860_178595_+	sulfurtransferase	NA	NA	NA	NA
AZX88631.1\|178632_180711_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.5e-27	23.6
AZX88632.1\|180960_181233_-	hypothetical protein	NA	NA	NA	NA
AZX88633.1\|181331_182420_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
AZX88634.1\|182423_184328_+	outer membrane protein assembly factor	NA	NA	NA	NA
AZX88635.1\|184324_187999_+	DUF490 domain-containing protein	NA	NA	NA	NA
AZX88636.1\|188059_188623_+	dCTP deaminase	S5VM63	Pseudomonas_phage	2.6e-72	75.3
AZX88637.1\|188630_189053_-	glyoxalase	NA	NA	NA	NA
AZX88638.1\|189080_189500_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA
AZX91883.1\|189528_189975_-	N-acetyltransferase	Q9AZG4	Lactococcus_phage	1.2e-08	29.4
AZX88639.1\|190101_190599_+	hypothetical protein	NA	NA	NA	NA
AZX88640.1\|190753_193024_+	lysine decarboxylase	NA	NA	NA	NA
AZX88641.1\|193072_194305_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
AZX88642.1\|194402_195353_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX88643.1\|195398_196091_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	2.4e-83	73.8
AZX88644.1\|196087_196981_+	ZIP family metal transporter	NA	NA	NA	NA
AZX88645.1\|197375_198476_+	aminomethyltransferase	NA	NA	NA	NA
AZX88646.1\|198557_198932_+	glycine cleavage system protein H	NA	NA	NA	NA
AZX88647.1\|198991_201856_+	glycine dehydrogenase	E3SN07	Prochlorococcus_phage	1.2e-261	51.4
AZX88648.1\|202000_202741_-	FadR family transcriptional regulator	NA	NA	NA	NA
AZX88649.1\|202810_204022_+	CoA transferase	NA	NA	NA	NA
AZX88650.1\|204050_205019_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX88651.1\|205632_206583_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX88652.1\|206739_207063_+	PsiF repeat family protein	NA	NA	NA	NA
AZX88653.1\|207167_208217_-	cyclase	NA	NA	NA	NA
AZX88654.1\|208213_209038_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA
AZX88655.1\|209038_209335_-	YciI family protein	NA	NA	NA	NA
AZX88656.1\|209360_209636_-	muconolactone delta-isomerase	NA	NA	NA	NA
AZX88657.1\|209692_210337_-	CoA transferase subunit B	NA	NA	NA	NA
AZX88658.1\|210336_211023_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA
AZX88659.1\|211152_212004_+	IclR family transcriptional regulator	NA	NA	NA	NA
AZX88660.1\|212054_212780_-	short-chain dehydrogenase	NA	NA	NA	NA
AZX88661.1\|212811_214161_-	short-chain fatty acid transporter	NA	NA	NA	NA
AZX88662.1\|214272_215205_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA
AZX88663.1\|215662_218458_-\|protease	serine protease autotransporter SphB1	NA	NA	NA	NA
AZX88664.1\|219051_221994_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
AZX88665.1\|222065_222785_+	7-cyano-7-deazaguanine synthase QueC	A0A0A0RPC6	Escherichia_phage	8.0e-50	43.9
AZX88666.1\|222823_223372_-	N-acetyltransferase	A0A2H4J136	uncultured_Caudovirales_phage	1.2e-21	41.7
AZX88667.1\|223526_224426_+	virginiamycin B lyase	NA	NA	NA	NA
AZX88668.1\|224450_225401_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

233333 : 286920

Bacillus_phage(25.0%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX88676.1\|233333_234284_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX88677.1\|234370_235321_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX88678.1\|235317_236268_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX88679.1\|236366_237164_-	beta-D-hydroxybutyrate dehydrogenase	NA	NA	NA	NA
AZX88680.1\|238113_238524_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA
AZX88681.1\|239545_240289_-	GntR family transcriptional regulator	NA	NA	NA	NA
AZX88682.1\|240332_241376_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX88683.1\|241546_243649_+	hypothetical protein	NA	NA	NA	NA
AZX88684.1\|245059_246016_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX88685.1\|246034_246526_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
AZX88686.1\|246522_247878_-	polynucleotide adenylyltransferase PcnB	A0A1B1IVF3	uncultured_Mediterranean_phage	3.4e-25	36.8
AZX88687.1\|247878_248577_-	HAD-IB family hydrolase	NA	NA	NA	NA
AZX88688.1\|248573_249275_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA
AZX88689.1\|249527_250577_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	5.6e-68	43.6
AZX88690.1\|250682_251624_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
AZX88691.1\|251620_253510_-	DNA mismatch repair protein MutL	A0A1B2LRQ5	Wolbachia_phage	3.3e-79	32.8
AZX88692.1\|253596_254235_+	hypothetical protein	NA	NA	NA	NA
AZX91884.1\|254377_255622_-	N-acetylmuramoyl-L-alanine amidase	A0A2H4JCM7	uncultured_Caudovirales_phage	4.1e-17	30.3
AZX88693.1\|255693_256230_-\|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
AZX88694.1\|256381_257773_+	class II fumarate hydratase	NA	NA	NA	NA
AZX88695.1\|257789_258770_-	AEC family transporter	NA	NA	NA	NA
AZX88696.1\|258905_259889_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA
AZX88697.1\|259953_260853_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZX88698.1\|260959_262714_+	gamma-glutamyltransferase	NA	NA	NA	NA
AZX88699.1\|262721_263846_-	CoA transferase	NA	NA	NA	NA
AZX88700.1\|263859_264840_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX88701.1\|265570_266521_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX88702.1\|267080_267626_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA
AZX88703.1\|267709_269329_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA
AZX88704.1\|269344_270499_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
AZX88705.1\|270512_270638_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA
AZX88706.1\|270634_272386_+	thiol reductant ABC exporter subunit CydD	W8CYL7	Bacillus_phage	3.4e-09	23.8
AZX88707.1\|272382_274062_+	thiol reductant ABC exporter subunit CydC	W8CYL7	Bacillus_phage	3.6e-16	27.6
AZX88708.1\|274097_274673_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.4e-28	43.1
AZX88709.1\|275815_276094_+	DUF4148 domain-containing protein	NA	NA	NA	NA
AZX91885.1\|277137_278088_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX88710.1\|278364_278526_+	DUF4224 domain-containing protein	NA	NA	NA	NA
AZX88711.1\|278533_278674_+	hypothetical protein	NA	NA	NA	NA
AZX88712.1\|279192_279642_-\|protease	ClpXP protease specificity-enhancing factor	NA	NA	NA	NA
AZX88713.1\|279651_280263_-	glutathione S-transferase	NA	NA	NA	NA
AZX88714.1\|280421_281276_-	cytochrome c1	NA	NA	NA	NA
AZX88715.1\|281295_282678_-	cytochrome b	NA	NA	NA	NA
AZX88716.1\|282742_283384_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA
AZX88717.1\|283523_283982_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
AZX88718.1\|284006_284783_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
AZX91886.1\|284836_285973_+	PDZ domain-containing protein	W5SAB9	Pithovirus	1.2e-07	31.2
AZX88719.1\|285969_286920_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

390853 : 448362

Orpheovirus(14.29%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX88818.1\|390853_391804_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX88819.1\|391940_392858_+	reductase	NA	NA	NA	NA
AZX88820.1\|392854_393103_+	glutaredoxin family protein	NA	NA	NA	NA
AZX88821.1\|393099_394305_+	CoA transferase	NA	NA	NA	NA
AZX88822.1\|394377_395373_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX88823.1\|395395_396616_-	CoA transferase	NA	NA	NA	NA
AZX88824.1\|396612_397257_-	hypothetical protein	NA	NA	NA	NA
AZX88825.1\|398987_399797_-	IclR family transcriptional regulator	NA	NA	NA	NA
AZX91892.1\|400014_401055_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	6.1e-59	42.5
AZX88826.1\|401153_402137_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX88827.1\|402063_402765_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX88828.1\|402813_403584_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AZX88829.1\|403580_404822_-	CoA transferase	NA	NA	NA	NA
AZX88830.1\|404926_406633_-	thiamine pyrophosphate-binding protein	NA	NA	NA	NA
AZX88831.1\|406629_407526_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZX88832.1\|407566_409156_-	sulfurtransferase	NA	NA	NA	NA
AZX88833.1\|409205_410198_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX88834.1\|410266_410866_-	hypothetical protein	NA	NA	NA	NA
AZX91893.1\|411326_412304_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX88835.1\|412382_413333_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX88836.1\|413421_414336_+	EamA/RhaT family transporter	NA	NA	NA	NA
AZX88837.1\|414332_414992_+	LysE family translocator	NA	NA	NA	NA
AZX88838.1\|415081_416005_+	alpha/beta hydrolase	A0A1C9C5K3	Heterosigma_akashiwo_virus	4.8e-07	27.2
AZX88839.1\|416010_416466_-	hypothetical protein	NA	NA	NA	NA
AZX88840.1\|416462_417566_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA
AZX91894.1\|417485_417794_+	GtrA family protein	NA	NA	NA	NA
AZX88841.1\|417753_419373_-	phospholipid carrier-dependent glycosyltransferase	NA	NA	NA	NA
AZX88842.1\|419369_420428_-	glycosyltransferase	I1TED8	Salmonella_phage	2.8e-59	40.5
AZX88843.1\|420557_421052_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AZX88844.1\|421144_422122_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX88845.1\|422317_423523_+	sodium/glutamate symporter	NA	NA	NA	NA
AZX88846.1\|423519_425031_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA
AZX91895.1\|425046_426360_-	short-chain fatty acids transporter	NA	NA	NA	NA
AZX88847.1\|426550_426730_-	hypothetical protein	NA	NA	NA	NA
AZX88848.1\|427139_427874_-	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	1.4e-41	43.8
AZX88849.1\|430318_431269_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX88850.1\|431400_431799_-	elongation factor G	E4ZFJ7	Streptococcus_phage	9.0e-19	44.3
AZX88851.1\|432209_432680_-	universal stress protein	NA	NA	NA	NA
AZX88852.1\|432768_433113_-	TIGR01244 family phosphatase	NA	NA	NA	NA
AZX88853.1\|433212_434613_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
AZX88854.1\|436401_436920_-	methyltransferase	G3MA03	Bacillus_virus	2.1e-12	38.9
AZX88855.1\|437030_437786_+	TerC family protein	A0A0R6PEZ3	Moraxella_phage	2.9e-42	40.8
AZX88856.1\|437981_439214_+	CoA transferase	NA	NA	NA	NA
AZX88857.1\|439206_439992_+	enoyl-CoA hydratase	NA	NA	NA	NA
AZX88858.1\|440058_441030_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX88859.1\|441040_442018_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZX88860.1\|442143_443316_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AZX88861.1\|443342_444371_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AZX88862.1\|444436_445630_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA
AZX88863.1\|447411_448362_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

619749 : 720213

111

uncultured_Caudovirales_phage(13.79%)

terminase,transposase,tRNA,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX89014.1\|619749_620700_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89015.1\|621398_621782_+	hypothetical protein	NA	NA	NA	NA
AZX89016.1\|621839_622442_+	DUF2946 domain-containing protein	NA	NA	NA	NA
AZX91901.1\|622459_622861_-	DoxX family protein	NA	NA	NA	NA
AZX89017.1\|622994_623888_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZX89018.1\|623884_624466_+	NUDIX hydrolase	NA	NA	NA	NA
AZX89019.1\|625260_625995_+	arginyltransferase	NA	NA	NA	NA
AZX89020.1\|626035_627085_+	dihydroorotate dehydrogenase (quinone)	NA	NA	NA	NA
AZX89021.1\|627232_627811_-	Phasin (PHA-granule associated protein)	NA	NA	NA	NA
AZX89022.1\|628197_629175_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA
AZX89023.1\|629268_633663_-	dermonecrotic toxin	NA	NA	NA	NA
AZX89024.1\|633863_634712_-	IclR family transcriptional regulator	NA	NA	NA	NA
AZX89025.1\|634870_635683_-	competence/damage-inducible protein A	NA	NA	NA	NA
AZX89026.1\|635738_636689_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89027.1\|636787_637588_-	hypothetical protein	NA	NA	NA	NA
AZX89028.1\|637649_638033_+	thioredoxin	NA	NA	NA	NA
AZX89029.1\|638044_639478_-	ATP-dependent helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.5e-52	34.4
AZX89030.1\|639684_640014_-	AzlD domain-containing protein	NA	NA	NA	NA
AZX91902.1\|640016_640685_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZX89031.1\|640948_641869_+	branched-chain amino acid transaminase	NA	NA	NA	NA
AZX89032.1\|641915_642128_+	zinc-finger domain-containing protein	NA	NA	NA	NA
AZX89033.1\|642150_642573_+	DUF4440 domain-containing protein	NA	NA	NA	NA
AZX89034.1\|642589_643690_+	alpha/beta hydrolase	NA	NA	NA	NA
AZX89035.1\|643786_645304_-	peptidase	NA	NA	NA	NA
AZX89036.1\|645379_646219_+	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	1.1e-66	48.9
AZX89037.1\|646240_647122_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA
AZX89038.1\|647203_648298_-	porin	NA	NA	NA	NA
AZX89039.1\|648591_649542_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91903.1\|649616_650558_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89040.1\|650641_651001_-	hypothetical protein	NA	NA	NA	NA
AZX89041.1\|651382_652420_-	hypothetical protein	NA	NA	NA	NA
AZX89042.1\|652736_654077_+	peptidase M24 family protein	NA	NA	NA	NA
AZX89043.1\|654086_654539_-	hypothetical protein	NA	NA	NA	NA
AZX89044.1\|654635_655817_+	monooxygenase	NA	NA	NA	NA
AZX89045.1\|655876_656908_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
AZX89046.1\|656948_657188_+	Fis family transcriptional regulator	NA	NA	NA	NA
AZX89047.1\|657257_658847_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	Q58MG4	Prochlorococcus_phage	8.7e-65	47.2
AZX89048.1\|658846_659395_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
AZX89049.1\|659475_660048_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
AZX89050.1\|660066_660978_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA
AZX89051.1\|661051_662020_-	threonine/serine dehydratase	NA	NA	NA	NA
AZX89052.1\|662142_663216_+	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	2.3e-08	25.7
AZX89053.1\|663220_665041_-	DNA helicase RecQ	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	3.1e-74	35.3
AZX89054.1\|665117_666068_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89055.1\|666156_666492_+	ASCH domain-containing protein	NA	NA	NA	NA
AZX89056.1\|666625_667276_+	carbonic anhydrase	NA	NA	NA	NA
AZX89057.1\|667297_668716_-	amidase	NA	NA	NA	NA
AZX89058.1\|668785_669541_-	hypothetical protein	NA	NA	NA	NA
AZX91904.1\|669509_670268_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZX89059.1\|670278_671160_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZX89060.1\|671176_671884_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.2e-07	25.4
AZX89061.1\|671886_672645_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	4.4e-14	24.4
AZX89062.1\|672854_674597_+	sulfite reductase	NA	NA	NA	NA
AZX89063.1\|674589_675114_+	DUF934 domain-containing protein	NA	NA	NA	NA
AZX89064.1\|675153_675948_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX89065.1\|676115_677189_+	hypothetical protein	NA	NA	NA	NA
AZX89066.1\|677287_678238_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89067.1\|678489_678702_-	hypothetical protein	NA	NA	NA	NA
AZX91905.1\|678767_679379_-	LexA family transcriptional repressor	NA	NA	NA	NA
AZX89068.1\|679858_680179_-	hypothetical protein	NA	NA	NA	NA
AZX89069.1\|680171_680870_-	hypothetical protein	NA	NA	NA	NA
AZX89070.1\|680884_681106_-	hypothetical protein	NA	NA	NA	NA
AZX89071.1\|681123_682074_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91906.1\|682749_683199_+\|terminase	terminase	C7U0W1	Enterobacteria_phage	5.2e-39	61.5
AZX89072.1\|683185_684463_+\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	2.4e-150	64.7
AZX89073.1\|684465_685884_+	DUF4055 domain-containing protein	R9TF43	Synechococcus_phage	2.2e-99	42.1
AZX91907.1\|685912_686968_+	hypothetical protein	A0A0H5BBX3	Pseudomonas_phage	2.6e-97	50.6
AZX89074.1\|686973_687216_+	hypothetical protein	A0A0H5AUE5	Pseudomonas_phage	5.6e-16	53.2
AZX89075.1\|687338_687941_+	hypothetical protein	R9TF81	Synechococcus_phage	7.9e-27	43.6
AZX89076.1\|688369_689320_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89077.1\|689337_689985_+	hypothetical protein	R9TJ64	Synechococcus_phage	2.7e-65	71.1
AZX89078.1\|689994_690246_+	hypothetical protein	NA	NA	NA	NA
AZX89079.1\|690308_690791_+	hypothetical protein	A0A2H4JE38	uncultured_Caudovirales_phage	1.8e-13	37.1
AZX89080.1\|690792_690993_+	hypothetical protein	NA	NA	NA	NA
AZX89081.1\|690992_691388_+	hypothetical protein	A0A2D2W284	Stenotrophomonas_phage	7.8e-07	35.0
AZX89082.1\|691384_691783_+	hypothetical protein	I6PCW1	Cronobacter_phage	4.2e-16	38.0
AZX89083.1\|691779_692202_+	hypothetical protein	NA	NA	NA	NA
AZX89084.1\|692209_692710_+	HNH endonuclease	A0A1I9SEX5	Klebsiella_phage	4.4e-31	45.1
AZX89085.1\|692964_693483_+\|tail	phage tail protein	A0A1S5R1H0	Pseudomonas_phage	5.4e-24	38.3
AZX89086.1\|693492_693822_+	hypothetical protein	A0A2H4J121	uncultured_Caudovirales_phage	2.9e-15	44.0
AZX89087.1\|693839_694130_+	hypothetical protein	A0A2H4JBP7	uncultured_Caudovirales_phage	3.7e-14	45.2
AZX89088.1\|694155_696768_+\|tail	phage tail tape measure protein	A0A2H4J107	uncultured_Caudovirales_phage	4.9e-105	38.6
AZX89089.1\|696777_697137_+	hypothetical protein	NA	NA	NA	NA
AZX89090.1\|697204_697738_+	DUF1833 domain-containing protein	A5A3Q9	Burkholderia_phage	1.1e-40	46.9
AZX89091.1\|697734_698124_+	hypothetical protein	A0A0G3EYJ9	Achromobacter_phage	3.0e-35	50.0
AZX89092.1\|698116_702073_+	DUF1983 domain-containing protein	A0A0B5A1N2	Achromobacter_phage	3.9e-215	40.8
AZX89093.1\|702077_702494_+	hypothetical protein	NA	NA	NA	NA
AZX89094.1\|702712_702976_+	hypothetical protein	A0A1B0V3F2	Roseobacter_phage	7.2e-09	41.8
AZX89095.1\|702975_703788_+	hypothetical protein	NA	NA	NA	NA
AZX89096.1\|703792_704035_+	hypothetical protein	NA	NA	NA	NA
AZX89097.1\|704013_704565_+	lysozyme	NA	NA	NA	NA
AZX89098.1\|704546_705080_+	DUF2514 domain-containing protein	NA	NA	NA	NA
AZX89099.1\|705076_705358_-	hypothetical protein	NA	NA	NA	NA
AZX89100.1\|705700_705901_+	hypothetical protein	NA	NA	NA	NA
AZX89101.1\|705907_706579_-	SOS response-associated peptidase	Q5QF62	Pseudomonas_virus	4.7e-36	39.9
AZX89102.1\|706934_707621_-	DNA-binding response regulator	NA	NA	NA	NA
AZX89103.1\|707601_708174_-	RNA pyrophosphohydrolase	NA	NA	NA	NA
AZX89104.1\|708239_709970_+\|tRNA	proline--tRNA ligase	A0A2K9L3R9	Tupanvirus	4.6e-11	29.4
AZX89105.1\|710022_710451_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA
AZX89106.1\|710453_711134_+	protein TolQ	NA	NA	NA	NA
AZX89107.1\|711133_711592_+	protein TolR	NA	NA	NA	NA
AZX89108.1\|711628_712603_+	cell envelope integrity protein TolA	NA	NA	NA	NA
AZX89109.1\|712619_713936_+	protein TolB	NA	NA	NA	NA
AZX89110.1\|713967_714465_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA
AZX89111.1\|714551_715241_+	tol-pal system protein YbgF	NA	NA	NA	NA
AZX89112.1\|715240_716290_+	iron ABC transporter permease	NA	NA	NA	NA
AZX89113.1\|716286_717081_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-15	30.6
AZX89114.1\|717249_717600_+	hypothetical protein	NA	NA	NA	NA
AZX89115.1\|717575_718133_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX89116.1\|719057_719276_+	hypothetical protein	NA	NA	NA	NA
AZX89117.1\|719262_720213_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

853046 : 902310

Vibrio_phage(33.33%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX89220.1\|853046_853997_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91912.1\|853969_854569_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZX89221.1\|854570_855005_+	PaaI family thioesterase	NA	NA	NA	NA
AZX89222.1\|855001_855436_+	hypothetical protein	NA	NA	NA	NA
AZX89223.1\|855419_856223_-	phosphatase PAP2 family protein	NA	NA	NA	NA
AZX89224.1\|856239_857055_-	DNA repair exonuclease	NA	NA	NA	NA
AZX89225.1\|857051_857867_-	diacylglycerol kinase	NA	NA	NA	NA
AZX89226.1\|858013_858715_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZX89227.1\|858742_860701_-\|holin	choline transporter	A0A2I7QNT1	Vibrio_phage	8.0e-28	30.3
AZX89228.1\|860783_861734_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89229.1\|861954_862623_+	transcriptional regulator	NA	NA	NA	NA
AZX89230.1\|862746_863853_+	MexH family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AZX89231.1\|863865_866979_+	MexW/MexI family multidrug efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	4.5e-57	21.5
AZX89232.1\|866975_868469_+	RND transporter	NA	NA	NA	NA
AZX89233.1\|868483_869155_+	transcriptional regulator	NA	NA	NA	NA
AZX89234.1\|869198_869693_-	azurin	NA	NA	NA	NA
AZX89235.1\|869833_870481_-	transcriptional regulator	NA	NA	NA	NA
AZX91913.1\|870584_872633_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA
AZX89236.1\|872629_874642_+	hydantoin utilization protein B	NA	NA	NA	NA
AZX89237.1\|874667_876002_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
AZX89238.1\|876110_877103_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX89239.1\|877169_879254_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
AZX89240.1\|879278_880250_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX89241.1\|880378_881380_-	peptidase M14	NA	NA	NA	NA
AZX89242.1\|881413_882655_-	cystathionine beta-lyase	NA	NA	NA	NA
AZX89243.1\|882735_883659_+	transcriptional regulator LrhA	NA	NA	NA	NA
AZX89244.1\|883736_884561_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AZX91914.1\|884757_885774_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AZX89245.1\|885970_886954_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX89246.1\|888552_889941_-	MmgE/PrpD family protein	NA	NA	NA	NA
AZX89247.1\|889971_890961_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX89248.1\|891071_892304_-	methylaspartate ammonia-lyase	NA	NA	NA	NA
AZX89249.1\|892585_893386_+	IclR family transcriptional regulator	NA	NA	NA	NA
AZX89250.1\|893408_895640_-\|holin	high-affinity choline transporter BetT	NA	NA	NA	NA
AZX89251.1\|896427_896874_-	preprotein translocase subunit SecG	NA	NA	NA	NA
AZX89252.1\|896895_897642_-	triose-phosphate isomerase	NA	NA	NA	NA
AZX89253.1\|897785_898763_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA
AZX89254.1\|899396_900008_+	PIN domain-containing protein	K4HZX4	Acidithiobacillus_phage	3.3e-12	32.5
AZX89255.1\|900001_901219_-	threonine ammonia-lyase	NA	NA	NA	NA
AZX89256.1\|901359_902310_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

911922 : 976862

Bacillus_phage(18.18%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX89265.1\|911922_912873_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89266.1\|912869_914720_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.3e-27	26.4
AZX89267.1\|915100_915760_+	thiopurine S-methyltransferase	NA	NA	NA	NA
AZX89268.1\|915847_916000_+	hypothetical protein	NA	NA	NA	NA
AZX89269.1\|916108_916276_+	hypothetical protein	NA	NA	NA	NA
AZX89270.1\|916287_916968_-	DUF3313 domain-containing protein	NA	NA	NA	NA
AZX89271.1\|917249_917966_+	flagellar brake protein	NA	NA	NA	NA
AZX89272.1\|917980_919282_-	phospholipase	NA	NA	NA	NA
AZX89273.1\|921426_924315_+	metal-dependent phosphohydrolase	NA	NA	NA	NA
AZX89274.1\|924538_925891_+	MmgE/PrpD family protein	NA	NA	NA	NA
AZX89275.1\|925919_926441_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
AZX89276.1\|926437_927892_+	carboxylase	NA	NA	NA	NA
AZX89277.1\|927926_928175_+	hypothetical protein	NA	NA	NA	NA
AZX89278.1\|928280_929156_+	hypothetical protein	NA	NA	NA	NA
AZX89279.1\|929181_930237_+	hypothetical protein	NA	NA	NA	NA
AZX89280.1\|930249_931041_+	GntR family transcriptional regulator	NA	NA	NA	NA
AZX89281.1\|931073_932444_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
AZX89282.1\|933620_934571_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89283.1\|934623_934845_+	hypothetical protein	NA	NA	NA	NA
AZX89284.1\|935004_935217_+	hypothetical protein	NA	NA	NA	NA
AZX89285.1\|935336_936455_+	mannose-6-phosphate isomerase	NA	NA	NA	NA
AZX89286.1\|936551_936767_+	hypothetical protein	NA	NA	NA	NA
AZX89287.1\|936960_937212_+	hypothetical protein	NA	NA	NA	NA
AZX89288.1\|937324_938275_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89289.1\|938271_938655_-	ferredoxin	NA	NA	NA	NA
AZX89290.1\|938709_940527_-	ABC transporter ATP-binding protein/permease	W8CYL7	Bacillus_phage	5.7e-44	27.9
AZX91916.1\|940673_941501_+	oxidoreductase	A0A2H4PQR8	Staphylococcus_phage	1.7e-67	47.4
AZX89291.1\|941546_942527_+	aldo/keto reductase	NA	NA	NA	NA
AZX89292.1\|942523_942736_-	hypothetical protein	NA	NA	NA	NA
AZX89293.1\|942732_943914_-	PepSY domain-containing protein	NA	NA	NA	NA
AZX89294.1\|944077_944812_+	serine/threonine protein phosphatase	A0A2H4J0P0	uncultured_Caudovirales_phage	1.9e-62	49.2
AZX89295.1\|944813_947426_-	penicillin-binding protein	NA	NA	NA	NA
AZX89296.1\|947561_949475_-	S9 family peptidase	NA	NA	NA	NA
AZX89297.1\|950090_950501_-	PaaI family thioesterase	NA	NA	NA	NA
AZX89298.1\|950598_951684_+	DNA polymerase IV	NA	NA	NA	NA
AZX89299.1\|951782_952733_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89300.1\|952729_953704_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX89301.1\|953828_954740_+	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	4.4e-05	27.6
AZX89302.1\|955016_955409_-	type II toxin-antitoxin system HicB family antitoxin	A0A0R6PJ17	Moraxella_phage	4.8e-25	45.0
AZX89303.1\|955538_956489_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89304.1\|956518_956701_-	addiction module toxin, HicA family	A0A1L2JY37	Aeribacillus_phage	3.7e-12	56.1
AZX89305.1\|956739_956997_-	hypothetical protein	NA	NA	NA	NA
AZX89306.1\|957473_958655_-	MFS transporter	NA	NA	NA	NA
AZX89307.1\|958870_959548_-	phosphoglycolate phosphatase	NA	NA	NA	NA
AZX89308.1\|959544_960318_-	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA
AZX89309.1\|960395_960977_-	OmpA family protein	NA	NA	NA	NA
AZX89310.1\|961347_964029_+	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	3.2e-104	33.5
AZX89311.1\|964028_965162_+	phosphoserine aminotransferase	M1Q1P2	Streptococcus_phage	6.4e-78	44.0
AZX89312.1\|965154_966240_+	prephenate dehydratase	NA	NA	NA	NA
AZX89313.1\|966326_967226_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA
AZX89314.1\|967222_968551_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
AZX89315.1\|968565_969237_+	cytidylate kinase	NA	NA	NA	NA
AZX89316.1\|969409_971140_+	30S ribosomal protein S1	NA	NA	NA	NA
AZX89317.1\|971141_971501_+	integration host factor subunit beta	NA	NA	NA	NA
AZX89318.1\|971692_972007_+	DUF1049 domain-containing protein	NA	NA	NA	NA
AZX89319.1\|972049_973270_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA
AZX89320.1\|973266_974208_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	1.5e-16	28.1
AZX89321.1\|974204_975194_+	ADP-L-glycero-D-mannoheptose-6-epimerase	E3SJ87	Synechococcus_phage	2.2e-26	34.4
AZX89322.1\|975228_975813_+	DUF655 domain-containing protein	NA	NA	NA	NA
AZX89323.1\|975911_976862_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

996262 : 1059413

Enterococcus_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX89338.1\|996262_997213_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89339.1\|997317_998367_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA
AZX91918.1\|998504_999521_-\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AZX89340.1\|1001029_1001602_-	chorismate--pyruvate lyase	NA	NA	NA	NA
AZX89341.1\|1001661_1002393_+	rRNA pseudouridine synthase	NA	NA	NA	NA
AZX91919.1\|1002444_1003362_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZX89342.1\|1004169_1007349_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AZX89343.1\|1007345_1008728_+	multidrug transporter	NA	NA	NA	NA
AZX89344.1\|1008797_1009049_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
AZX89345.1\|1009194_1009845_-	SCO family protein	NA	NA	NA	NA
AZX89346.1\|1009995_1012110_-	M3 family peptidase	NA	NA	NA	NA
AZX89347.1\|1012185_1013037_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	2.1e-33	39.8
AZX89348.1\|1013033_1013660_-	DNA-binding response regulator	NA	NA	NA	NA
AZX89349.1\|1013656_1015411_-	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA
AZX89350.1\|1015703_1018409_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA
AZX89351.1\|1018421_1020083_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA
AZX89352.1\|1020095_1021886_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.4e-39	25.2
AZX89353.1\|1022107_1023283_-	flagellin FliC	NA	NA	NA	NA
AZX89354.1\|1023325_1024276_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89355.1\|1024374_1025115_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
AZX89356.1\|1025309_1027346_+	transketolase	NA	NA	NA	NA
AZX89357.1\|1027363_1028374_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
AZX89358.1\|1028491_1029685_+	phosphoglycerate kinase	NA	NA	NA	NA
AZX89359.1\|1029714_1030488_-	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA
AZX89360.1\|1030484_1031675_-	acetate kinase	NA	NA	NA	NA
AZX89361.1\|1031700_1032639_-	phosphate acetyltransferase	NA	NA	NA	NA
AZX91920.1\|1032635_1034984_-	DUF3141 domain-containing protein	NA	NA	NA	NA
AZX89362.1\|1035138_1035846_-	glutathione S-transferase	NA	NA	NA	NA
AZX89363.1\|1035883_1037017_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89364.1\|1037293_1037842_-	damage-inducible protein DinB	NA	NA	NA	NA
AZX89365.1\|1037860_1038346_-	N-acetyltransferase	NA	NA	NA	NA
AZX89366.1\|1038523_1039462_+	curved DNA-binding protein	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	5.6e-11	24.1
AZX89367.1\|1039464_1039782_+	MerR family transcriptional regulator	NA	NA	NA	NA
AZX89368.1\|1039827_1040772_+	hypothetical protein	NA	NA	NA	NA
AZX89369.1\|1042452_1043103_+	molybdopterin adenylyltransferase	NA	NA	NA	NA
AZX89370.1\|1043156_1043492_+	hypothetical protein	NA	NA	NA	NA
AZX89371.1\|1043488_1044349_+	M23 family peptidase	A0A292GJG6	Xanthomonas_phage	2.6e-15	36.1
AZX89372.1\|1044365_1044647_-	hypothetical protein	NA	NA	NA	NA
AZX89373.1\|1044720_1044984_-	translation initiation factor IF-1	NA	NA	NA	NA
AZX89374.1\|1045227_1046178_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89375.1\|1046476_1047214_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA
AZX89376.1\|1047649_1047973_+	flagellar transcriptional activator FlhD	NA	NA	NA	NA
AZX89377.1\|1048007_1048568_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
AZX89378.1\|1048688_1049564_+	flagellar motor stator protein MotA	NA	NA	NA	NA
AZX89379.1\|1049576_1050524_+	motility protein MotB	NA	NA	NA	NA
AZX89380.1\|1050625_1050919_+	response regulator	NA	NA	NA	NA
AZX89381.1\|1050945_1053003_+	chemotaxis protein CheA	NA	NA	NA	NA
AZX89382.1\|1053017_1053518_+	chemotaxis protein CheW	NA	NA	NA	NA
AZX89383.1\|1053591_1055298_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.4e-12	41.7
AZX89384.1\|1056161_1057214_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA
AZX89385.1\|1057266_1057656_+	chemotaxis protein CheY	Q56AR1	Bacillus_thuringiensis_phage	5.7e-10	33.3
AZX89386.1\|1057664_1058297_+	protein phosphatase CheZ	NA	NA	NA	NA
AZX91921.1\|1058396_1059413_-\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_10

1065397 : 1125460

uncultured_Mediterranean_phage(37.5%)

holin,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX89391.1\|1065397_1066825_-\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
AZX91923.1\|1067762_1068779_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AZX89392.1\|1069111_1070047_-	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	3.0e-41	35.5
AZX89393.1\|1070096_1071977_-	protein translocase subunit SecD	NA	NA	NA	NA
AZX89394.1\|1072043_1072388_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	1.0e-10	40.4
AZX89395.1\|1072532_1073669_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.9e-85	44.4
AZX89396.1\|1073665_1074739_-\|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	NA	NA	NA	NA
AZX89397.1\|1074896_1076333_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA
AZX91924.1\|1076423_1077065_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
AZX91925.1\|1077400_1078417_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AZX89398.1\|1080293_1080473_+	hypothetical protein	NA	NA	NA	NA
AZX91926.1\|1080459_1081410_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91927.1\|1082612_1084034_-	siroheme synthase	NA	NA	NA	NA
AZX89399.1\|1084297_1085014_+	hypothetical protein	NA	NA	NA	NA
AZX89400.1\|1085098_1085416_+	DUF883 domain-containing protein	NA	NA	NA	NA
AZX89401.1\|1085456_1085870_+\|holin	phage holin family protein	NA	NA	NA	NA
AZX89402.1\|1085871_1086231_+	hypothetical protein	NA	NA	NA	NA
AZX89403.1\|1086273_1087818_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA
AZX89404.1\|1087901_1088732_+	transglycosylase	NA	NA	NA	NA
AZX89405.1\|1088766_1089921_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
AZX89406.1\|1089963_1090836_+	hypothetical protein	NA	NA	NA	NA
AZX89407.1\|1090952_1093241_+	NADP-dependent malic enzyme	NA	NA	NA	NA
AZX89408.1\|1094447_1094912_+	barstar family protein 2	NA	NA	NA	NA
AZX89409.1\|1094938_1095889_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91928.1\|1096256_1097033_-	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.3e-17	28.7
AZX89410.1\|1097077_1097935_-	phosphate ABC transporter, permease protein PstA	NA	NA	NA	NA
AZX89411.1\|1097956_1098973_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
AZX89412.1\|1099107_1100148_-	phosphate ABC transporter substrate-binding protein PstS	M4QHS4	Cyanophage	2.1e-51	40.2
AZX89413.1\|1100342_1102424_-	polyphosphate kinase 1	NA	NA	NA	NA
AZX89414.1\|1102659_1104153_+	exopolyphosphatase	NA	NA	NA	NA
AZX89415.1\|1104383_1105178_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AZX89416.1\|1105398_1106757_-	phosphoglucosamine mutase	NA	NA	NA	NA
AZX89417.1\|1106753_1107596_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	3.2e-26	32.5
AZX89418.1\|1107614_1109501_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	M4QMW8	Micromonas_pusilla_virus	1.4e-109	41.5
AZX89419.1\|1109738_1110371_-	ribosomal RNA large subunit methyltransferase E	NA	NA	NA	NA
AZX89420.1\|1110389_1110992_+	hypothetical protein	NA	NA	NA	NA
AZX89421.1\|1111143_1112094_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89422.1\|1112896_1113697_-	hypothetical protein	NA	NA	NA	NA
AZX89423.1\|1113740_1114727_-	homoserine kinase	NA	NA	NA	NA
AZX89424.1\|1114866_1115880_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
AZX89425.1\|1115876_1116827_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89426.1\|1116939_1117398_-	CBS domain-containing protein	NA	NA	NA	NA
AZX89427.1\|1117434_1118748_-	hypothetical protein	NA	NA	NA	NA
AZX89428.1\|1118765_1119137_+	DUF2069 domain-containing protein	NA	NA	NA	NA
AZX89429.1\|1119133_1120597_+	YdiU family protein	A0A075BSJ0	Microcystis_phage	1.7e-43	32.5
AZX89430.1\|1120689_1121466_+	DNA-binding response regulator	NA	NA	NA	NA
AZX89431.1\|1121447_1124327_-	diguanylate phosphodiesterase	NA	NA	NA	NA
AZX89432.1\|1124509_1125460_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_11

1156526 : 1218697

Erysipelothrix_phage(33.33%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX89454.1\|1156526_1157477_-\|transposase	IS481 family transposase IS481v2	NA	NA	NA	NA
AZX89455.1\|1157575_1158208_-	fimbrial protein	NA	NA	NA	NA
AZX89456.1\|1158372_1160655_-	NADP-dependent malic enzyme	NA	NA	NA	NA
AZX89457.1\|1160809_1163506_-	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA
AZX89458.1\|1163631_1164120_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AZX89459.1\|1166530_1169401_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA
AZX89460.1\|1169446_1170661_+	dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA
AZX89461.1\|1170890_1172318_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.1e-41	28.1
AZX89462.1\|1172358_1173507_+	cell division protein ZapE	NA	NA	NA	NA
AZX89463.1\|1173519_1174278_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZX89464.1\|1174365_1175268_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZX89465.1\|1175264_1176215_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89466.1\|1176344_1177328_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX89467.1\|1177382_1178105_-	short-chain dehydrogenase	NA	NA	NA	NA
AZX89468.1\|1179583_1180939_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
AZX89469.1\|1181019_1183395_-	protein tex	NA	NA	NA	NA
AZX89470.1\|1183559_1185635_+	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	2.4e-75	30.0
AZX89471.1\|1185696_1186497_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AZX89472.1\|1186598_1187561_+	RluA family pseudouridine synthase	NA	NA	NA	NA
AZX89473.1\|1187548_1188304_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA
AZX89474.1\|1188411_1190049_+	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA
AZX89475.1\|1190116_1190854_+	beta-ketoacyl-ACP reductase	NA	NA	NA	NA
AZX89476.1\|1190956_1191532_+	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA
AZX89477.1\|1191704_1192241_+	hypothetical protein	NA	NA	NA	NA
AZX89478.1\|1192243_1192588_+	cupredoxin domain-containing protein	NA	NA	NA	NA
AZX89479.1\|1192603_1193449_+	FTR1 family iron permease	NA	NA	NA	NA
AZX89480.1\|1193487_1194867_+	4Fe-4S binding domain-containing protein	NA	NA	NA	NA
AZX89481.1\|1194944_1195826_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
AZX89482.1\|1195924_1196875_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89483.1\|1196871_1197282_-	VOC family protein	NA	NA	NA	NA
AZX89484.1\|1197389_1198244_-	2-pyrone-4,6-dicarboxylate hydrolase	NA	NA	NA	NA
AZX89485.1\|1198236_1199199_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX89486.1\|1199244_1200369_-	mandelate racemase/muconate lactonizing enzyme family protein	Q6A202	Oenococcus_phage	1.5e-31	28.3
AZX91930.1\|1200480_1201353_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZX89487.1\|1201477_1202257_+	short-chain dehydrogenase	NA	NA	NA	NA
AZX89488.1\|1202410_1203832_+	MFS transporter	NA	NA	NA	NA
AZX89489.1\|1204266_1205964_+	sodium:proline symporter	NA	NA	NA	NA
AZX89490.1\|1205992_1206115_+	hypothetical protein	NA	NA	NA	NA
AZX91931.1\|1206190_1207132_-	LD-carboxypeptidase	NA	NA	NA	NA
AZX89491.1\|1207458_1208205_+	hypothetical protein	NA	NA	NA	NA
AZX89492.1\|1208212_1209139_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZX89493.1\|1209260_1210178_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZX89494.1\|1210217_1211171_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX89495.1\|1211195_1211774_+	amino acid synthesis family protein	NA	NA	NA	NA
AZX89496.1\|1213447_1214056_+	hypothetical protein	NA	NA	NA	NA
AZX91932.1\|1214133_1214487_-	hypothetical protein	NA	NA	NA	NA
AZX89497.1\|1214570_1215560_-	succinylglutamate desuccinylase	NA	NA	NA	NA
AZX89498.1\|1215762_1216713_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89499.1\|1216799_1217750_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89500.1\|1217746_1218697_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_12

1269624 : 1326835

Klosneuvirus(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX89537.1\|1269624_1270575_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89538.1\|1274321_1274933_-	DUF2239 domain-containing protein	NA	NA	NA	NA
AZX89539.1\|1275155_1276616_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.6e-97	41.3
AZX89540.1\|1276712_1278305_+	GMP synthase (glutamine-hydrolyzing)	A0A1V0SH76	Hokovirus	1.0e-17	33.3
AZX89541.1\|1278291_1278570_+	hypothetical protein	NA	NA	NA	NA
AZX89542.1\|1278628_1278916_+	XRE family transcriptional regulator	NA	NA	NA	NA
AZX89543.1\|1278917_1280258_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
AZX89544.1\|1280353_1281043_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZX89545.1\|1281055_1282486_+	MFS transporter	NA	NA	NA	NA
AZX89546.1\|1284210_1285032_+	IclR family transcriptional regulator	NA	NA	NA	NA
AZX89547.1\|1285042_1286614_+	amidohydrolase	NA	NA	NA	NA
AZX89548.1\|1286642_1287620_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX89549.1\|1287646_1288450_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.7e-30	38.2
AZX89550.1\|1288446_1289241_+	ABC transporter permease	NA	NA	NA	NA
AZX89551.1\|1289248_1290484_+	DUF521 domain-containing protein	NA	NA	NA	NA
AZX89552.1\|1290476_1290911_+	DUF126 domain-containing protein	NA	NA	NA	NA
AZX89553.1\|1291660_1292611_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89554.1\|1293232_1294960_-	sodium-independent anion transporter	NA	NA	NA	NA
AZX89555.1\|1295071_1296430_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
AZX89556.1\|1296550_1296736_+	hypothetical protein	NA	NA	NA	NA
AZX89557.1\|1296722_1297673_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89558.1\|1297713_1298784_+	FUSC family protein	NA	NA	NA	NA
AZX91934.1\|1298806_1299685_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
AZX89559.1\|1299856_1300828_+	AraC family transcriptional regulator	NA	NA	NA	NA
AZX89560.1\|1300990_1301833_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZX89561.1\|1301994_1302675_+	anti-sigma factor	NA	NA	NA	NA
AZX89562.1\|1302668_1303838_+	amine oxidase	NA	NA	NA	NA
AZX89563.1\|1303834_1304866_+	alcohol dehydrogenase	A0A2K9L339	Tupanvirus	1.8e-26	27.8
AZX89564.1\|1304909_1306151_+	MFS transporter	NA	NA	NA	NA
AZX89565.1\|1306185_1307718_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
AZX89566.1\|1307798_1308422_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA
AZX89567.1\|1308452_1309064_+	LysE family translocator	NA	NA	NA	NA
AZX89568.1\|1309099_1309570_+	DUF1801 domain-containing protein	NA	NA	NA	NA
AZX89569.1\|1310001_1311006_+	peptidase M20	NA	NA	NA	NA
AZX89570.1\|1311042_1312557_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX89571.1\|1312560_1313520_+	ABC transporter permease	NA	NA	NA	NA
AZX89572.1\|1313548_1314352_+	ABC transporter permease	NA	NA	NA	NA
AZX89573.1\|1314353_1315988_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.9e-15	31.1
AZX89574.1\|1316071_1317133_+	LacI family transcriptional regulator	NA	NA	NA	NA
AZX89575.1\|1317331_1317601_+	hypothetical protein	NA	NA	NA	NA
AZX89576.1\|1317604_1318129_+	DNA-binding protein	J9Q7G7	Salmonella_phage	6.5e-09	32.9
AZX89577.1\|1318544_1319495_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89578.1\|1319491_1320562_-	metal-dependent hydrolase	NA	NA	NA	NA
AZX89579.1\|1320634_1321273_+	DedA family protein	NA	NA	NA	NA
AZX89580.1\|1321567_1321795_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AZX89581.1\|1321917_1322631_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AZX89582.1\|1322875_1323826_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89583.1\|1323929_1324211_+	hypothetical protein	NA	NA	NA	NA
AZX89584.1\|1324325_1325774_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
AZX89585.1\|1325884_1326835_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_13

1417066 : 1470246

Salmonella_phage(22.22%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX89664.1\|1417066_1418017_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89665.1\|1418183_1418537_+	cytochrome C	NA	NA	NA	NA
AZX89666.1\|1418549_1418912_+	cytochrome	NA	NA	NA	NA
AZX89667.1\|1418953_1419379_-	DUF1841 domain-containing protein	NA	NA	NA	NA
AZX89668.1\|1419581_1420838_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.2e-11	64.8
AZX89669.1\|1421036_1422017_+	hypothetical protein	NA	NA	NA	NA
AZX89670.1\|1422166_1423408_+	hypothetical protein	NA	NA	NA	NA
AZX89671.1\|1423506_1424457_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89672.1\|1424465_1425161_-	two-component system response regulator KdpE	NA	NA	NA	NA
AZX89673.1\|1427982_1428582_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA
AZX89674.1\|1428592_1430758_-	K(+)-transporting ATPase subunit B	M1HBF8	Paramecium_bursaria_Chlorella_virus	1.2e-24	27.1
AZX89675.1\|1430781_1432566_-	potassium-transporting ATPase A chain	NA	NA	NA	NA
AZX89676.1\|1432565_1432655_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA
AZX89677.1\|1433349_1433622_+	DUF4212 domain-containing protein	NA	NA	NA	NA
AZX89678.1\|1433621_1435688_+	cation acetate symporter	NA	NA	NA	NA
AZX89679.1\|1435684_1436635_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89680.1\|1436750_1437083_-	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA
AZX89681.1\|1437079_1437766_-	DNA mismatch repair protein MutS	NA	NA	NA	NA
AZX89682.1\|1437752_1438712_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.1e-57	40.2
AZX91943.1\|1438753_1441114_+	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	7.6e-81	48.0
AZX89683.1\|1441113_1441746_+	outer-membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
AZX89684.1\|1441808_1443188_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	1.6e-75	38.9
AZX89685.1\|1443234_1444590_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.6e-83	47.5
AZX89686.1\|1444868_1445117_+	hypothetical protein	NA	NA	NA	NA
AZX89687.1\|1445304_1445622_-	virulence factor	NA	NA	NA	NA
AZX89688.1\|1445894_1446410_-	hypothetical protein	T1SAR8	Salmonella_phage	5.1e-06	44.6
AZX89689.1\|1446503_1446665_+	hypothetical protein	NA	NA	NA	NA
AZX89690.1\|1446680_1447436_-	GGDEF domain-containing protein	NA	NA	NA	NA
AZX89691.1\|1447774_1447981_+	hypothetical protein	NA	NA	NA	NA
AZX89692.1\|1447988_1448648_-	antibiotic resistance protein	NA	NA	NA	NA
AZX89693.1\|1448942_1451147_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
AZX89694.1\|1451257_1452481_-	MFS transporter	S4TR35	Salmonella_phage	9.8e-24	29.4
AZX89695.1\|1452603_1453578_-	AraC family transcriptional regulator	NA	NA	NA	NA
AZX89696.1\|1453645_1454839_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
AZX89697.1\|1454853_1455654_-	siderophore ferric iron reductase	NA	NA	NA	NA
AZX89698.1\|1455650_1457507_-	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA
AZX89699.1\|1457503_1458109_-	N-acetyltransferase	NA	NA	NA	NA
AZX89700.1\|1458127_1459513_-	alcaligin biosynthesis enzyme	NA	NA	NA	NA
AZX89701.1\|1460238_1461465_+	transporter	NA	NA	NA	NA
AZX89702.1\|1461553_1462336_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA
AZX89703.1\|1462434_1463385_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89704.1\|1463411_1464185_+	peroxide stress protein YaaA	NA	NA	NA	NA
AZX89705.1\|1464196_1465438_+	MFS transporter	NA	NA	NA	NA
AZX89706.1\|1467219_1468170_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89707.1\|1468201_1469299_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	3.5e-20	37.3
AZX89708.1\|1469295_1470246_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_14

1512095 : 1570958

Streptococcus_virus(11.11%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX91944.1\|1512095_1512584_+\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
AZX89754.1\|1512701_1513280_+\|protease	protease	NA	NA	NA	NA
AZX89755.1\|1513352_1513754_+	aryl-sulfate sulfotransferase	NA	NA	NA	NA
AZX89756.1\|1513852_1514803_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89757.1\|1514809_1515922_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA
AZX89758.1\|1516608_1517811_+	MFS transporter	NA	NA	NA	NA
AZX89759.1\|1518014_1520675_+	hypothetical protein	NA	NA	NA	NA
AZX89760.1\|1520687_1524092_+	nuclease	NA	NA	NA	NA
AZX89761.1\|1524759_1526985_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	1.2e-43	38.5
AZX89762.1\|1527031_1527358_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
AZX89763.1\|1527408_1528017_+	recombination protein RecR	NA	NA	NA	NA
AZX89764.1\|1528115_1529066_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89765.1\|1529135_1529900_-	DUF1828 domain-containing protein	NA	NA	NA	NA
AZX89766.1\|1529896_1530496_-	hypothetical protein	NA	NA	NA	NA
AZX91945.1\|1530599_1531445_-	hypothetical protein	A0A1I9SA48	Rhodococcus_phage	7.0e-37	35.3
AZX89767.1\|1531510_1532137_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
AZX89768.1\|1532133_1533084_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89769.1\|1533070_1533259_-	hypothetical protein	NA	NA	NA	NA
AZX89770.1\|1533182_1534304_-	DUF1513 domain-containing protein	NA	NA	NA	NA
AZX89771.1\|1534284_1535286_-	aminopeptidase	NA	NA	NA	NA
AZX89772.1\|1535391_1536903_-	thiol oxidoreductase	NA	NA	NA	NA
AZX89773.1\|1536899_1538204_-	peptidase	NA	NA	NA	NA
AZX89774.1\|1538315_1538876_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AZX89775.1\|1539143_1539698_+	NAD(P)H-dependent oxidoreductase	A0A2P0ZL82	Lactobacillus_phage	1.7e-15	32.0
AZX89776.1\|1540153_1540369_-	dodecin domain-containing protein	NA	NA	NA	NA
AZX91946.1\|1540623_1543221_+	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	1.5e-21	22.6
AZX89777.1\|1543217_1544405_+	cupin	NA	NA	NA	NA
AZX89778.1\|1545063_1545678_+	serotype 3 fimbrial subunit	NA	NA	NA	NA
AZX89779.1\|1545766_1546894_-	lipoprotein	NA	NA	NA	NA
AZX89780.1\|1546905_1547811_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
AZX89781.1\|1548703_1549654_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89782.1\|1549835_1550588_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA
AZX89783.1\|1550656_1551316_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA
AZX89784.1\|1551312_1552041_+	glutamine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.3e-35	39.3
AZX89785.1\|1552053_1554333_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A1B1IUF0	uncultured_Mediterranean_phage	5.9e-06	32.1
AZX89786.1\|1554357_1554561_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
AZX89787.1\|1554602_1555250_-	guanylate kinase	A0A218KC48	Bacillus_phage	3.1e-13	33.9
AZX89788.1\|1555370_1556288_-	cytochrome C	NA	NA	NA	NA
AZX89789.1\|1556284_1556998_-	cytochrome C	NA	NA	NA	NA
AZX89790.1\|1557235_1558006_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZX89791.1\|1558010_1558610_-	NlpC/P60 family protein	A0A0A8WF62	Clostridium_phage	1.4e-20	41.6
AZX89792.1\|1558854_1560345_+	AMP nucleosidase	NA	NA	NA	NA
AZX89793.1\|1560403_1560688_-	transcriptional regulator	NA	NA	NA	NA
AZX89794.1\|1560684_1560813_-	hypothetical protein	NA	NA	NA	NA
AZX89795.1\|1560825_1560981_-	hypothetical protein	NA	NA	NA	NA
AZX89796.1\|1561253_1562180_-	YicC family protein	NA	NA	NA	NA
AZX89797.1\|1562316_1563057_+	ribonuclease PH	NA	NA	NA	NA
AZX89798.1\|1563223_1564600_-	MmgE/PrpD family protein	NA	NA	NA	NA
AZX89799.1\|1564781_1565687_+	transcriptional regulator	NA	NA	NA	NA
AZX89800.1\|1565721_1567461_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.0e-10	27.1
AZX89801.1\|1567338_1569141_-	GGDEF domain-containing protein	NA	NA	NA	NA
AZX89802.1\|1569258_1569909_+	non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family	NA	NA	NA	NA
AZX89803.1\|1570007_1570958_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_15

1616130 : 1671721

Brazilian_cedratvirus(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX89834.1\|1616130_1617081_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89835.1\|1617139_1617913_+	oxidoreductase	NA	NA	NA	NA
AZX89836.1\|1617905_1619462_+	LTA synthase family protein	NA	NA	NA	NA
AZX89837.1\|1619458_1620409_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89838.1\|1621735_1622338_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZX89839.1\|1622577_1623279_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
AZX89840.1\|1623272_1624055_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	2.0e-09	25.8
AZX89841.1\|1624239_1625190_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89842.1\|1625288_1626026_-	hypothetical protein	A0A0S4KZH7	Pseudomonas_phage	4.1e-41	46.6
AZX89843.1\|1626215_1626974_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZX89844.1\|1627020_1628010_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX89845.1\|1628187_1629156_-	transporter	NA	NA	NA	NA
AZX89846.1\|1630695_1631664_+	AAA family ATPase	NA	NA	NA	NA
AZX89847.1\|1631672_1632614_+	DUF58 domain-containing protein	NA	NA	NA	NA
AZX89848.1\|1633087_1634098_+	hypothetical protein	NA	NA	NA	NA
AZX91950.1\|1634088_1635603_+	VWA domain-containing protein	NA	NA	NA	NA
AZX89849.1\|1635599_1636946_+	hypothetical protein	NA	NA	NA	NA
AZX91951.1\|1636948_1637983_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA
AZX89850.1\|1638032_1639658_+	arylsulfatase	A0A2P0VMN7	Tetraselmis_virus	2.0e-149	52.2
AZX89851.1\|1640210_1641161_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89852.1\|1641265_1642213_+	hypothetical protein	NA	NA	NA	NA
AZX91952.1\|1642266_1644081_-	histidine kinase	NA	NA	NA	NA
AZX89853.1\|1644073_1644748_-	DNA-binding response regulator	NA	NA	NA	NA
AZX89854.1\|1644877_1647952_+	autotransporter SphB2	NA	NA	NA	NA
AZX89855.1\|1647965_1648265_-	transcriptional regulator	NA	NA	NA	NA
AZX91953.1\|1648579_1649203_-	glutathione S-transferase	NA	NA	NA	NA
AZX89856.1\|1649446_1650316_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA
AZX89857.1\|1650293_1651238_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZX91954.1\|1651323_1652295_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX91955.1\|1652362_1653136_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZX89858.1\|1653132_1654329_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
AZX89859.1\|1654359_1655310_-	hydrolase	NA	NA	NA	NA
AZX89860.1\|1655531_1656221_+	short-chain dehydrogenase	NA	NA	NA	NA
AZX89861.1\|1656285_1657041_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZX89862.1\|1657092_1658085_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX89863.1\|1658094_1659048_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZX89864.1\|1659163_1660126_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX89865.1\|1661527_1661956_+	hypothetical protein	NA	NA	NA	NA
AZX89866.1\|1661952_1662903_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91956.1\|1663196_1663919_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	1.3e-87	68.2
AZX89867.1\|1664357_1665545_-	MFS transporter	NA	NA	NA	NA
AZX89868.1\|1665548_1665929_-	ArsR family transcriptional regulator	NA	NA	NA	NA
AZX89869.1\|1667648_1668620_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX89870.1\|1668633_1669347_+	NAD-dependent oxidoreductase	NA	NA	NA	NA
AZX89871.1\|1669351_1670269_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZX89872.1\|1670375_1670672_+	hypothetical protein	NA	NA	NA	NA
AZX89873.1\|1670770_1671721_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_16

1829487 : 1888757

Klosneuvirus(40.0%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX89992.1\|1829487_1830438_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89993.1\|1830562_1831372_-	enoyl-CoA hydratase	NA	NA	NA	NA
AZX89994.1\|1831572_1832523_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX89995.1\|1833796_1835014_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA
AZX89996.1\|1836070_1836973_+	GntR family transcriptional regulator	NA	NA	NA	NA
AZX89997.1\|1837049_1837922_+	MOSC domain-containing protein	NA	NA	NA	NA
AZX89998.1\|1838052_1838421_+	aspartate 1-decarboxylase	NA	NA	NA	NA
AZX89999.1\|1838478_1839525_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
AZX90000.1\|1839720_1840977_+	D-amino acid dehydrogenase	NA	NA	NA	NA
AZX90001.1\|1840981_1842319_+	glycerol-3-phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX90002.1\|1842468_1843425_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZX90003.1\|1844897_1845248_+	hypothetical protein	NA	NA	NA	NA
AZX90004.1\|1845295_1846870_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX90005.1\|1846922_1847867_+	ABC transporter permease	NA	NA	NA	NA
AZX90006.1\|1847884_1848715_+	ABC transporter permease	NA	NA	NA	NA
AZX90007.1\|1848707_1850342_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.2e-18	32.7
AZX90008.1\|1850338_1851694_+	amidase	NA	NA	NA	NA
AZX90009.1\|1852600_1854178_+	lipoprotein	NA	NA	NA	NA
AZX90010.1\|1854181_1855456_+	hypothetical protein	NA	NA	NA	NA
AZX91962.1\|1855553_1855928_+	hypothetical protein	NA	NA	NA	NA
AZX90011.1\|1857643_1858777_+	general secretion pathway protein	NA	NA	NA	NA
AZX90012.1\|1858814_1859420_+	prepilin-type cleavage/methylation domain-containing protein	NA	NA	NA	NA
AZX90013.1\|1859416_1860235_+	hypothetical protein	NA	NA	NA	NA
AZX90014.1\|1860306_1862931_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.7e-81	39.4
AZX90015.1\|1862917_1863172_+	sulfurtransferase TusA family protein	NA	NA	NA	NA
AZX90016.1\|1863238_1863820_-	hypothetical protein	NA	NA	NA	NA
AZX90017.1\|1864123_1864384_+	30S ribosomal protein S16	NA	NA	NA	NA
AZX90018.1\|1864549_1865173_+	ribosome maturation factor RimM	NA	NA	NA	NA
AZX90019.1\|1865172_1865946_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AZX90020.1\|1865942_1867151_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
AZX90021.1\|1867176_1867650_-	RidA family protein	NA	NA	NA	NA
AZX90022.1\|1867723_1868674_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90023.1\|1868772_1869723_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90024.1\|1869821_1871171_-	two-component sensor histidine kinase	NA	NA	NA	NA
AZX90025.1\|1871936_1872692_+	MipA/OmpV family protein	NA	NA	NA	NA
AZX90026.1\|1872784_1875667_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	3.7e-138	37.1
AZX90027.1\|1875989_1876415_+	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	2.1e-21	43.2
AZX90028.1\|1876442_1877591_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA
AZX90029.1\|1877587_1878094_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AZX90030.1\|1878100_1879396_+	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)	NA	NA	NA	NA
AZX90031.1\|1879436_1880741_+\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
AZX90032.1\|1880742_1881381_+	hypothetical protein	NA	NA	NA	NA
AZX90033.1\|1881383_1882544_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA
AZX90034.1\|1882570_1883926_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA
AZX90035.1\|1883929_1885000_+	histidinol-phosphate aminotransferase 1	A0A1X6WGT4	Pacmanvirus	2.5e-15	25.7
AZX90036.1\|1885138_1885375_+	RNA-binding protein Hfq	NA	NA	NA	NA
AZX90037.1\|1885462_1886569_+	GTPase HflX	NA	NA	NA	NA
AZX90038.1\|1886534_1887839_+\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
AZX90039.1\|1887857_1888757_+\|protease	protease modulator HflC	NA	NA	NA	NA

DBSCAN-SWA_17

1898997 : 1944369

Staphylococcus_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX90047.1\|1898997_1899948_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90048.1\|1900046_1900997_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90049.1\|1900983_1901184_-	hypothetical protein	NA	NA	NA	NA
AZX90050.1\|1901196_1902282_+	AI-2E family transporter	NA	NA	NA	NA
AZX90051.1\|1902297_1903059_-	ABC transporter permease	NA	NA	NA	NA
AZX90052.1\|1903055_1903979_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.6e-23	33.6
AZX90053.1\|1904077_1904602_-	N-acetyltransferase	NA	NA	NA	NA
AZX90054.1\|1904610_1905354_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
AZX90055.1\|1905449_1905689_-	hypothetical protein	NA	NA	NA	NA
AZX90056.1\|1905702_1905855_-	lipoprotein	NA	NA	NA	NA
AZX90057.1\|1905940_1907431_-	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA
AZX90058.1\|1907522_1908461_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA
AZX90059.1\|1908457_1908634_-	CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone	NA	NA	NA	NA
AZX90060.1\|1908636_1909299_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA
AZX91964.1\|1910920_1911064_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA
AZX90061.1\|1911060_1912035_-	hypothetical protein	NA	NA	NA	NA
AZX90062.1\|1912201_1913152_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90063.1\|1913148_1914423_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	9.6e-14	28.9
AZX90064.1\|1914520_1915720_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA
AZX90065.1\|1915716_1916370_+	alpha/beta hydrolase	NA	NA	NA	NA
AZX90066.1\|1916366_1917803_+	dethiobiotin synthase	NA	NA	NA	NA
AZX90067.1\|1917790_1918150_+	CidA/LrgA family protein	NA	NA	NA	NA
AZX90068.1\|1919122_1920073_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90069.1\|1921118_1922984_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
AZX91965.1\|1923241_1924762_+	aldehyde dehydrogenase	NA	NA	NA	NA
AZX90070.1\|1924849_1925500_-	flavodoxin family protein	NA	NA	NA	NA
AZX90071.1\|1926448_1927744_+	DUF445 domain-containing protein	NA	NA	NA	NA
AZX90072.1\|1927765_1928650_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZX91966.1\|1928748_1929624_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
AZX90073.1\|1929613_1929970_-	DUF1428 domain-containing protein	NA	NA	NA	NA
AZX90074.1\|1930043_1931075_+	AraC family transcriptional regulator	NA	NA	NA	NA
AZX90075.1\|1931204_1931384_-	DUF3008 domain-containing protein	NA	NA	NA	NA
AZX90076.1\|1931481_1932006_+	DUF302 domain-containing protein	NA	NA	NA	NA
AZX90077.1\|1932016_1932853_-	alpha/beta hydrolase	NA	NA	NA	NA
AZX90078.1\|1932965_1933337_+	transcriptional regulator	NA	NA	NA	NA
AZX90079.1\|1933333_1933885_+	ATPase	NA	NA	NA	NA
AZX90080.1\|1933900_1935592_-	sodium-independent anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	5.0e-42	27.3
AZX90081.1\|1935640_1936321_-	GntR family transcriptional regulator	NA	NA	NA	NA
AZX90082.1\|1936568_1937033_-	hypothetical protein	NA	NA	NA	NA
AZX90083.1\|1937202_1938132_+	ZIP family metal transporter	NA	NA	NA	NA
AZX90084.1\|1938144_1938792_-	hypothetical protein	NA	NA	NA	NA
AZX90085.1\|1938865_1940683_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.3e-37	27.4
AZX90086.1\|1940766_1941717_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90087.1\|1941815_1942766_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90088.1\|1943418_1944369_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_18

1974142 : 2038511

Vibrio_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX90116.1\|1974142_1975093_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90117.1\|1975079_1975271_-	hypothetical protein	NA	NA	NA	NA
AZX90118.1\|1975314_1976265_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90119.1\|1976363_1977329_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX90120.1\|1977466_1978366_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZX90121.1\|1980960_1982448_+	hypothetical protein	NA	NA	NA	NA
AZX90122.1\|1982458_1983655_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA
AZX90123.1\|1983727_1985047_+	phenylacetate--CoA ligase family protein	NA	NA	NA	NA
AZX90124.1\|1985043_1985919_+	alpha/beta hydrolase	NA	NA	NA	NA
AZX90125.1\|1985949_1987119_-	CoA transferase	NA	NA	NA	NA
AZX90126.1\|1987115_1987430_-	ferredoxin	NA	NA	NA	NA
AZX90127.1\|1987451_1988174_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZX90128.1\|1988173_1988992_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AZX90129.1\|1988996_1989524_-	ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA
AZX90130.1\|1989529_1990795_-	ring-hydroxylating oxygenase subunit alpha	NA	NA	NA	NA
AZX90131.1\|1991144_1992284_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX90132.1\|1992361_1993234_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZX90133.1\|1994104_1995055_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90134.1\|1995014_1995650_-	hypothetical protein	NA	NA	NA	NA
AZX90135.1\|1996009_1997332_-	isocitrate lyase	NA	NA	NA	NA
AZX90136.1\|1997560_1998472_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	A0A2I7SAX1	Vibrio_phage	5.9e-42	37.6
AZX90137.1\|1999896_2000469_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
AZX90138.1\|2000508_2002338_-	UvrABC system protein C	NA	NA	NA	NA
AZX90139.1\|2002300_2003359_-	beta-hexosaminidase	NA	NA	NA	NA
AZX90140.1\|2003396_2003858_-	holo-ACP synthase	NA	NA	NA	NA
AZX90141.1\|2003942_2004689_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
AZX90142.1\|2006179_2009410_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AZX90143.1\|2009476_2010808_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AZX90144.1\|2011060_2011435_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AZX90145.1\|2011537_2012716_-	hypothetical protein	NA	NA	NA	NA
AZX90146.1\|2012726_2013317_-	DUF4136 domain-containing protein	NA	NA	NA	NA
AZX91970.1\|2013427_2014234_+	molybdenum-dependent transcriptional regulator	NA	NA	NA	NA
AZX90147.1\|2014259_2015054_-	ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	5.1e-05	25.7
AZX90148.1\|2016054_2017029_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX90149.1\|2017187_2017700_-	superoxide dismutase [Cu-Zn] SodC1	Q9MC02	Salmonella_phage	1.8e-43	52.3
AZX90150.1\|2017856_2018828_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX90151.1\|2020572_2021379_-	enoyl-CoA hydratase	NA	NA	NA	NA
AZX91971.1\|2021375_2022512_-	malonyl-CoA decarboxylase	NA	NA	NA	NA
AZX90152.1\|2022627_2023392_-	GntR family transcriptional regulator	NA	NA	NA	NA
AZX90153.1\|2023505_2024276_-	spermidine synthase	NA	NA	NA	NA
AZX90154.1\|2024360_2025572_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA
AZX90155.1\|2025620_2025995_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA
AZX90156.1\|2026095_2027358_-	glycine betaine/L-proline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.8e-28	36.6
AZX90157.1\|2027354_2028212_-	ABC transporter permease	NA	NA	NA	NA
AZX90158.1\|2028384_2029386_-	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX90159.1\|2029837_2030788_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90160.1\|2032303_2033503_+	Bcr/CflA family drug resistance efflux transporter	NA	NA	NA	NA
AZX90161.1\|2033871_2034108_+	50S ribosomal protein L28	NA	NA	NA	NA
AZX90162.1\|2034171_2034339_+	50S ribosomal protein L33	NA	NA	NA	NA
AZX90163.1\|2034452_2036348_-	STAS domain-containing protein	A0A2H4J153	uncultured_Caudovirales_phage	2.3e-19	27.5
AZX90164.1\|2036511_2037462_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90165.1\|2037560_2038511_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_19

2131666 : 2195756

Lake_Baikal_phage(18.18%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX90238.1\|2131666_2132935_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90239.1\|2133505_2133718_-	hypothetical protein	NA	NA	NA	NA
AZX90240.1\|2133735_2134467_-	hypothetical protein	NA	NA	NA	NA
AZX90241.1\|2134501_2135143_-	CoA transferase subunit B	NA	NA	NA	NA
AZX90242.1\|2135135_2135852_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA
AZX90243.1\|2138016_2138793_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AZX90244.1\|2138814_2139972_-	thiolase	NA	NA	NA	NA
AZX90245.1\|2139968_2140400_-	hypothetical protein	NA	NA	NA	NA
AZX90246.1\|2140396_2141200_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AZX90247.1\|2141213_2141669_-	MaoC family dehydratase	NA	NA	NA	NA
AZX90248.1\|2141681_2142653_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX90249.1\|2142718_2143942_-	CoA transferase	NA	NA	NA	NA
AZX90250.1\|2144169_2145120_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZX90251.1\|2145243_2147697_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.5e-220	52.0
AZX90252.1\|2147885_2149190_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.2e-129	53.8
AZX90253.1\|2149294_2149948_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	6.8e-56	57.5
AZX90254.1\|2149950_2151261_-	trigger factor	NA	NA	NA	NA
AZX90255.1\|2151439_2152018_+	TIGR00645 family protein	K4K6D8	Caulobacter_phage	1.0e-23	33.7
AZX90256.1\|2152129_2152330_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	7.4e-14	64.4
AZX90257.1\|2152675_2153242_-	DUF924 domain-containing protein	NA	NA	NA	NA
AZX90258.1\|2153325_2153529_-	cold-shock protein CspA	A0A2H4N7Y6	Lake_Baikal_phage	1.6e-16	62.1
AZX90259.1\|2153835_2154156_-	hypothetical protein	NA	NA	NA	NA
AZX90260.1\|2154197_2154479_-	hypothetical protein	NA	NA	NA	NA
AZX90261.1\|2154553_2155810_-	autotransporter Phg	NA	NA	NA	NA
AZX90262.1\|2156192_2156522_+	DUF4148 domain-containing protein	NA	NA	NA	NA
AZX90263.1\|2158092_2158914_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
AZX90264.1\|2158913_2160053_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA
AZX90265.1\|2160059_2160956_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
AZX90266.1\|2160952_2162878_+	ABC transporter ATP-binding protein	A0A2K9L0W2	Tupanvirus	1.1e-66	31.8
AZX90267.1\|2163237_2165850_+	TonB-dependent receptor	NA	NA	NA	NA
AZX90268.1\|2165902_2168203_-	DNA helicase II	A7KV33	Bacillus_phage	9.9e-110	35.9
AZX90269.1\|2168199_2169408_-	acyl-CoA desaturase	NA	NA	NA	NA
AZX90270.1\|2169669_2170044_+	hypothetical protein	NA	NA	NA	NA
AZX90271.1\|2170040_2170991_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90272.1\|2171089_2173084_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.4e-21	33.3
AZX90273.1\|2173143_2174109_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA
AZX90274.1\|2174098_2176960_+\|tRNA	isoleucine--tRNA ligase	A0A1V0SJ93	Klosneuvirus	1.0e-71	25.5
AZX90275.1\|2176962_2177469_+	lipoprotein signal peptidase	NA	NA	NA	NA
AZX90276.1\|2177573_2178782_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	3.8e-36	30.0
AZX90277.1\|2178783_2179722_-	hypothetical protein	NA	NA	NA	NA
AZX90278.1\|2179883_2180357_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AZX90279.1\|2180353_2181304_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90280.1\|2181290_2181470_-	hypothetical protein	NA	NA	NA	NA
AZX90281.1\|2181414_2181855_-	DUF937 domain-containing protein	NA	NA	NA	NA
AZX90282.1\|2181983_2183213_-	lytic murein transglycosylase	NA	NA	NA	NA
AZX90283.1\|2183251_2184073_-	DUF455 domain-containing protein	NA	NA	NA	NA
AZX90284.1\|2184126_2185278_+	N-acetyltransferase	NA	NA	NA	NA
AZX90285.1\|2185369_2185858_-	DUF1854 domain-containing protein	NA	NA	NA	NA
AZX90286.1\|2188384_2190958_+	cyanophycin synthetase	NA	NA	NA	NA
AZX90287.1\|2191028_2193602_+	cyanophycin synthetase	NA	NA	NA	NA
AZX90288.1\|2193867_2194068_+	CsbD family protein	NA	NA	NA	NA
AZX90289.1\|2194099_2194261_+	DUF1328 domain-containing protein	NA	NA	NA	NA
AZX90290.1\|2194318_2194657_+	phospholipid-binding protein	NA	NA	NA	NA
AZX90291.1\|2194805_2195756_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_20

2211726 : 2269481

Moraxella_phage(40.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX91979.1\|2211726_2212743_+\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AZX90306.1\|2212840_2213881_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	6.1e-91	51.3
AZX90307.1\|2214015_2215308_+	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	1.7e-66	36.0
AZX90308.1\|2216667_2217051_+	thioredoxin	V9SJ74	Achromobacter_phage	8.1e-09	25.8
AZX90309.1\|2217068_2217656_-	DUF1949 domain-containing protein	A0A1X9I5T8	Streptococcus_phage	4.7e-16	35.8
AZX90310.1\|2217693_2218644_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90311.1\|2218742_2219693_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90312.1\|2219791_2220352_-	diaminobutyrate acetyltransferase	NA	NA	NA	NA
AZX90313.1\|2220348_2220894_-	MarR family transcriptional regulator	NA	NA	NA	NA
AZX90314.1\|2221089_2222118_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
AZX90315.1\|2222158_2223499_+	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	8.8e-18	22.8
AZX90316.1\|2223607_2224612_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX90317.1\|2224718_2227319_+	DUF3394 domain-containing protein	NA	NA	NA	NA
AZX90318.1\|2227417_2228368_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90319.1\|2228466_2229417_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90320.1\|2229413_2229686_-	hypothetical protein	NA	NA	NA	NA
AZX91980.1\|2229944_2232656_-	autotransporter BapA	NA	NA	NA	NA
AZX90321.1\|2233223_2234768_+	cardiolipin synthase	NA	NA	NA	NA
AZX90322.1\|2234764_2235115_-	anti-sigma factor antagonist	NA	NA	NA	NA
AZX90323.1\|2235258_2235687_+	serine/threonine protein kinase	NA	NA	NA	NA
AZX90324.1\|2235770_2236934_+	alanine racemase	NA	NA	NA	NA
AZX90325.1\|2236930_2239372_-	MFS transporter	NA	NA	NA	NA
AZX90326.1\|2239456_2241478_+	regulator	NA	NA	NA	NA
AZX90327.1\|2241474_2242662_+	hypothetical protein	NA	NA	NA	NA
AZX90328.1\|2243988_2244189_-	hypothetical protein	NA	NA	NA	NA
AZX91981.1\|2244225_2244924_+	hypothetical protein	NA	NA	NA	NA
AZX90329.1\|2245098_2245701_+	RNA polymerase sigma factor	NA	NA	NA	NA
AZX90330.1\|2245721_2247524_-	EscC/YscC/HrcC family type III secretion system outer membrane ring protein	NA	NA	NA	NA
AZX90331.1\|2247514_2247913_-	hypothetical protein	NA	NA	NA	NA
AZX90332.1\|2247909_2248959_-	EscU/YscU/HrcU family type III secretion system export apparatus switch protein	NA	NA	NA	NA
AZX90333.1\|2248955_2249756_-	EscT/YscT/HrcT family type III secretion system export apparatus protein	NA	NA	NA	NA
AZX90334.1\|2249767_2250043_-	EscS/YscS/HrcS family type III secretion system export apparatus protein	NA	NA	NA	NA
AZX90335.1\|2250039_2250711_-	EscR/YscR/HrcR family type III secretion system export apparatus protein	NA	NA	NA	NA
AZX91982.1\|2250707_2251787_-	YscQ/HrcQ family type III secretion apparatus protein	NA	NA	NA	NA
AZX90336.1\|2251783_2252332_-	hypothetical protein	NA	NA	NA	NA
AZX90337.1\|2252328_2252838_-	type III secretion protein	NA	NA	NA	NA
AZX90338.1\|2252837_2254172_-	EscN/YscN/HrcN family type III secretion system ATPase	NA	NA	NA	NA
AZX90339.1\|2254176_2254815_-	HrpE/YscL family type III secretion apparatus protein	NA	NA	NA	NA
AZX90340.1\|2254784_2255447_-	hypothetical protein	NA	NA	NA	NA
AZX90341.1\|2255439_2256264_-	EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein	NA	NA	NA	NA
AZX90342.1\|2256260_2256668_-	EscI/YscI/HrpB family type III secretion system inner rod protein	NA	NA	NA	NA
AZX90343.1\|2256664_2257186_-	hypothetical protein	NA	NA	NA	NA
AZX90344.1\|2257190_2257652_-	CesD/SycD/LcrH family type III secretion system chaperone	NA	NA	NA	NA
AZX90345.1\|2257675_2258878_-	hypothetical protein	NA	NA	NA	NA
AZX90346.1\|2258907_2259849_-	hypothetical protein	NA	NA	NA	NA
AZX90347.1\|2259896_2260382_-	CesD/SycD/LcrH family type III secretion system chaperone	NA	NA	NA	NA
AZX90348.1\|2260397_2260673_-	hypothetical protein	NA	NA	NA	NA
AZX90349.1\|2260694_2261312_-	hypothetical protein	NA	NA	NA	NA
AZX90350.1\|2261475_2262573_+	TyeA family type III secretion system gatekeeper subunit	NA	NA	NA	NA
AZX90351.1\|2262569_2262947_+	type III secretion chaperone SycN	NA	NA	NA	NA
AZX90352.1\|2262951_2263362_+	hypothetical protein	NA	NA	NA	NA
AZX90353.1\|2263358_2263727_+	hypothetical protein	NA	NA	NA	NA
AZX91983.1\|2263723_2265823_+	EscV/YscV/HrcV family type III secretion system export apparatus protein	NA	NA	NA	NA
AZX90354.1\|2265819_2267100_+	EscD/YscD/HrpQ family type III secretion system inner membrane ring protein	NA	NA	NA	NA
AZX90355.1\|2267140_2267440_+	hypothetical protein	NA	NA	NA	NA
AZX90356.1\|2267429_2267696_+	type III secretion protein	NA	NA	NA	NA
AZX90357.1\|2267731_2268187_-	Tir chaperone family protein	NA	NA	NA	NA
AZX90358.1\|2268530_2269481_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_21

2475998 : 2534242

Planktothrix_phage(28.57%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX90525.1\|2475998_2476949_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90526.1\|2477428_2478085_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
AZX90527.1\|2478099_2479767_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AZX90528.1\|2479769_2480399_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX90529.1\|2480610_2481705_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX90530.1\|2481849_2482662_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
AZX90531.1\|2482665_2484369_-	peptidoglycan-binding protein LysM	NA	NA	NA	NA
AZX90532.1\|2484419_2485550_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
AZX90533.1\|2485736_2486813_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA
AZX91990.1\|2486894_2487545_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
AZX90534.1\|2487559_2488993_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA
AZX90535.1\|2489246_2490065_-	tungsten ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX90536.1\|2490061_2490766_-	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-13	30.0
AZX90537.1\|2491665_2492781_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZX90538.1\|2492814_2493189_-	hypothetical protein	NA	NA	NA	NA
AZX90539.1\|2493211_2494369_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA
AZX90540.1\|2494381_2494615_-	lipoprotein	NA	NA	NA	NA
AZX90541.1\|2495249_2498219_-	formate dehydrogenase	NA	NA	NA	NA
AZX90542.1\|2498233_2498443_-	formate dehydrogenase	NA	NA	NA	NA
AZX90543.1\|2498594_2499224_-	hypothetical protein	NA	NA	NA	NA
AZX90544.1\|2499220_2501338_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
AZX90545.1\|2501334_2502015_-	DUF3306 domain-containing protein	NA	NA	NA	NA
AZX90546.1\|2502011_2502572_-	DUF3305 domain-containing protein	NA	NA	NA	NA
AZX90547.1\|2502578_2503676_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
AZX90548.1\|2503813_2504422_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA
AZX90549.1\|2504418_2505711_+	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA
AZX90550.1\|2505724_2506267_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA
AZX90551.1\|2506276_2507113_-	M48 family peptidase	NA	NA	NA	NA
AZX90552.1\|2507146_2508208_-	chorismate synthase	A0A291AU41	Pandoravirus	2.9e-80	42.8
AZX90553.1\|2508249_2509302_-	GGDEF domain-containing protein	NA	NA	NA	NA
AZX90554.1\|2509317_2509620_-	hypothetical protein	NA	NA	NA	NA
AZX90555.1\|2509761_2510712_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90556.1\|2510890_2512585_+	iron ABC transporter permease	NA	NA	NA	NA
AZX90557.1\|2512581_2513667_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.4e-27	37.7
AZX90558.1\|2513714_2514614_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZX90559.1\|2514624_2515269_+	histidine phosphatase family protein	NA	NA	NA	NA
AZX90560.1\|2516290_2519533_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
AZX90561.1\|2519543_2520641_-	carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	5.3e-53	35.2
AZX90562.1\|2520903_2521887_+	transaldolase	H6WFR1	Cyanophage	5.9e-11	29.2
AZX90563.1\|2521985_2522936_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90564.1\|2523034_2523985_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90565.1\|2523994_2524684_-	VIT family protein	NA	NA	NA	NA
AZX90566.1\|2524743_2525181_-	PaaI family thioesterase	NA	NA	NA	NA
AZX90567.1\|2525226_2526120_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA
AZX90568.1\|2526167_2527340_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AZX90569.1\|2527336_2528491_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
AZX90570.1\|2528687_2529038_-	RnfH family protein	NA	NA	NA	NA
AZX90571.1\|2529027_2529462_-	ubiquinone-binding protein	NA	NA	NA	NA
AZX90572.1\|2529478_2530429_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90573.1\|2530576_2531044_+	SsrA-binding protein	W5RAM5	Staphylococcus_phage	6.2e-27	45.1
AZX90574.1\|2531024_2532182_-	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	2.3e-14	36.2
AZX90575.1\|2532247_2533174_-	paraslipin	NA	NA	NA	NA
AZX90576.1\|2533291_2534242_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_22

2576520 : 2643020

uncultured_Caudovirales_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX90615.1\|2576520_2577471_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90616.1\|2577840_2578413_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA
AZX90617.1\|2578415_2579426_+	flagellar motor switch protein FliM	NA	NA	NA	NA
AZX90618.1\|2579418_2579919_+	flagellar motor switch protein FliN	NA	NA	NA	NA
AZX90619.1\|2579929_2580271_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA
AZX90620.1\|2580282_2581074_+	flagellar biosynthetic protein FliP	NA	NA	NA	NA
AZX90621.1\|2581090_2581360_+	flagellar biosynthetic protein FliQ	NA	NA	NA	NA
AZX90622.1\|2581382_2582171_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA
AZX91994.1\|2582217_2583234_-\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AZX90623.1\|2583450_2584893_-	PAS domain S-box protein	A0A1B0V854	Salmonella_phage	1.0e-35	41.8
AZX90624.1\|2585071_2586691_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.5e-08	45.3
AZX90625.1\|2586811_2588632_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	6.4e-11	52.6
AZX90626.1\|2588710_2590243_-	flagellar hook-associated protein 3	NA	NA	NA	NA
AZX90627.1\|2590276_2591923_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA
AZX90628.1\|2591992_2593015_-	flagellar assembly peptidoglycan hydrolase FlgJ	A0A088F6W1	Sulfitobacter_phage	1.9e-12	31.4
AZX90629.1\|2593032_2594166_-	flagellar biosynthesis protein FlgI	NA	NA	NA	NA
AZX90630.1\|2594168_2594858_-	flagellar L-ring protein	NA	NA	NA	NA
AZX90631.1\|2594857_2595643_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA
AZX90632.1\|2595686_2596451_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA
AZX90633.1\|2596489_2597911_-	flagellar hook protein FlgE	NA	NA	NA	NA
AZX90634.1\|2597976_2598681_-	flagellar basal body rod modification protein	NA	NA	NA	NA
AZX90635.1\|2598728_2599148_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA
AZX90636.1\|2599160_2599568_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA
AZX91995.1\|2599751_2600462_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA
AZX90637.1\|2600588_2600879_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA
AZX90638.1\|2600896_2601379_+	flagellar protein FlgN	NA	NA	NA	NA
AZX90639.1\|2605884_2607039_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA
AZX91996.1\|2607344_2608361_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AZX90640.1\|2608607_2609396_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX90641.1\|2609462_2610143_+	amino acid ABC transporter permease	NA	NA	NA	NA
AZX90642.1\|2610139_2610910_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.8e-30	39.1
AZX90643.1\|2611008_2611959_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90644.1\|2612014_2612932_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA
AZX90645.1\|2612942_2614121_-	mandelate racemase	NA	NA	NA	NA
AZX90646.1\|2614140_2615136_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX90647.1\|2616724_2617333_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
AZX90648.1\|2617320_2618361_+	LacI family transcriptional regulator	NA	NA	NA	NA
AZX90649.1\|2618378_2619341_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX90650.1\|2619337_2620531_-	CoA transferase	NA	NA	NA	NA
AZX90651.1\|2620527_2621325_-	citryl-CoA lyase	NA	NA	NA	NA
AZX90652.1\|2621350_2622337_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX90653.1\|2622355_2624395_-	acetyl-CoA synthetase	NA	NA	NA	NA
AZX91997.1\|2624596_2625277_+	GntR family transcriptional regulator	NA	NA	NA	NA
AZX90654.1\|2625290_2626202_-	CoA ester lyase	NA	NA	NA	NA
AZX90655.1\|2626198_2626777_-	NADPH-dependent oxidoreductase	NA	NA	NA	NA
AZX90656.1\|2626915_2627821_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZX90657.1\|2627828_2631248_+	nuclease	NA	NA	NA	NA
AZX90658.1\|2631235_2633836_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA
AZX90659.1\|2634791_2635424_-	PadR family transcriptional regulator	NA	NA	NA	NA
AZX90660.1\|2635817_2636576_+	hypothetical protein	NA	NA	NA	NA
AZX90661.1\|2636572_2637775_+	cardiolipin synthase ClsB	NA	NA	NA	NA
AZX90662.1\|2637962_2638913_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90663.1\|2639820_2640966_+	DUF3182 domain-containing protein	NA	NA	NA	NA
AZX91998.1\|2640985_2641708_+	alpha/beta hydrolase	NA	NA	NA	NA
AZX90664.1\|2641824_2642004_+	hypothetical protein	NA	NA	NA	NA
AZX90665.1\|2642069_2643020_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_23

2806625 : 2862189

Diachasmimorpha_longicaudata_entomopoxvirus(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX90796.1\|2806625_2807576_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90797.1\|2807674_2808625_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90798.1\|2808611_2808806_-	hypothetical protein	NA	NA	NA	NA
AZX90799.1\|2808953_2809559_+	fimbrial protein FimX	NA	NA	NA	NA
AZX90800.1\|2809612_2810926_-	phenylacetate--CoA ligase	NA	NA	NA	NA
AZX90801.1\|2811000_2811471_-	phenylacetic acid degradation protein PaaD	NA	NA	NA	NA
AZX90802.1\|2811470_2812259_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA
AZX90803.1\|2812269_2813922_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA
AZX92011.1\|2816120_2816627_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA
AZX90804.1\|2816623_2817388_-	phenylacetate-CoA oxygenase subunit PaaI	NA	NA	NA	NA
AZX90805.1\|2817403_2817688_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA
AZX90806.1\|2817752_2818742_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA
AZX90807.1\|2818913_2819843_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA
AZX90808.1\|2819814_2820501_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA
AZX90809.1\|2820534_2821080_-	oligoribonuclease	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	2.1e-26	37.7
AZX90810.1\|2821124_2822390_+	peptidase M48	NA	NA	NA	NA
AZX90811.1\|2822386_2823289_+	ribosome biogenesis GTPase	NA	NA	NA	NA
AZX90812.1\|2824470_2825415_-	ABC transporter permease	NA	NA	NA	NA
AZX90813.1\|2825509_2827027_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX90814.1\|2827068_2828697_-	gamma-glutamyltransferase	NA	NA	NA	NA
AZX90815.1\|2828804_2829686_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZX90816.1\|2832798_2833173_+	endonuclease	F4YXR7	Roseobacter_phage	2.1e-25	54.4
AZX90817.1\|2833197_2833536_-	P-II family nitrogen regulator	NA	NA	NA	NA
AZX90818.1\|2833579_2835214_-	NAD+ synthase	A0A2L0UZF5	Agrobacterium_phage	8.3e-87	36.6
AZX90819.1\|2835252_2836599_-	mechanosensitive ion channel protein MscS	NA	NA	NA	NA
AZX92012.1\|2836706_2838128_+	argininosuccinate lyase	NA	NA	NA	NA
AZX90820.1\|2838197_2838782_-	nitroreductase	NA	NA	NA	NA
AZX90821.1\|2838884_2839835_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90822.1\|2839969_2841076_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZX90823.1\|2841086_2842184_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA
AZX90824.1\|2842328_2843534_-	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA
AZX90825.1\|2843540_2844062_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA
AZX90826.1\|2844058_2844550_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA
AZX90827.1\|2844546_2844798_-	MoaD/ThiS family protein	NA	NA	NA	NA
AZX90828.1\|2844778_2845264_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA
AZX90829.1\|2845398_2848860_+	hypothetical protein	NA	NA	NA	NA
AZX90830.1\|2848856_2849762_+	dienelactone hydrolase family protein	NA	NA	NA	NA
AZX90831.1\|2849771_2850203_-	lipoprotein	NA	NA	NA	NA
AZX92013.1\|2850449_2850953_+	peroxiredoxin	M1I839	Pelagibacter_phage	1.8e-24	44.1
AZX90832.1\|2850964_2852431_+	MFS transporter	NA	NA	NA	NA
AZX90833.1\|2852505_2853381_-	hypothetical protein	NA	NA	NA	NA
AZX92014.1\|2853377_2854385_-	biotin synthase	NA	NA	NA	NA
AZX90834.1\|2854852_2855158_+	DUF4148 domain-containing protein	NA	NA	NA	NA
AZX90835.1\|2855248_2855839_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZX92015.1\|2856029_2857046_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AZX90836.1\|2857237_2859574_-	copper-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	3.2e-124	42.8
AZX90837.1\|2859656_2860091_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
AZX90838.1\|2860189_2861140_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90839.1\|2861238_2862189_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_24

2870214 : 2926999

uncultured_Mediterranean_phage(28.57%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX90847.1\|2870214_2871165_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90848.1\|2872871_2873177_-	hypothetical protein	NA	NA	NA	NA
AZX90849.1\|2873845_2874184_+	transcriptional regulator	NA	NA	NA	NA
AZX90850.1\|2878736_2879339_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZX90851.1\|2879435_2880725_+	MFS transporter	NA	NA	NA	NA
AZX90852.1\|2880782_2881514_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-12	31.0
AZX90853.1\|2881510_2882314_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.9e-14	23.5
AZX90854.1\|2882310_2883399_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
AZX90855.1\|2883395_2884325_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZX90856.1\|2884473_2885619_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX90857.1\|2885640_2886591_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90858.1\|2886921_2890743_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
AZX90859.1\|2890899_2891568_-	lipoprotein	NA	NA	NA	NA
AZX90860.1\|2891572_2893246_-	MCE family protein	NA	NA	NA	NA
AZX90861.1\|2893264_2894584_-	paraquat-inducible membrane protein A	NA	NA	NA	NA
AZX90862.1\|2894588_2896940_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	4.2e-164	41.9
AZX92016.1\|2896959_2899128_-	penicillin-binding protein 1C	NA	NA	NA	NA
AZX90863.1\|2899124_2904314_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA
AZX90864.1\|2904403_2904718_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.2e-10	43.8
AZX90865.1\|2904945_2905191_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-20	76.6
AZX90866.1\|2905285_2905804_+	hypothetical protein	A0A1B1IUW8	uncultured_Mediterranean_phage	5.1e-14	42.2
AZX90867.1\|2905903_2907109_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
AZX90868.1\|2907224_2908622_-	chloride channel protein EriC	NA	NA	NA	NA
AZX90869.1\|2908738_2909317_-	superoxide dismutase [Fe]	NA	NA	NA	NA
AZX90870.1\|2909389_2910781_-	exodeoxyribonuclease VII large subunit	A0A1V0SD82	Indivirus	1.4e-29	32.0
AZX90871.1\|2910948_2911899_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90872.1\|2912179_2912800_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
AZX90873.1\|2912796_2913210_+	biopolymer transporter ExbD	NA	NA	NA	NA
AZX90874.1\|2913206_2914250_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
AZX90875.1\|2914305_2914494_+	hypothetical protein	NA	NA	NA	NA
AZX90876.1\|2914503_2915268_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
AZX90877.1\|2915358_2916015_+	adenylate kinase	NA	NA	NA	NA
AZX90878.1\|2916106_2916865_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
AZX90879.1\|2916890_2918492_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA
AZX90880.1\|2918692_2919697_+	DUF4880 domain-containing protein	NA	NA	NA	NA
AZX90881.1\|2919797_2920061_+	30S ribosomal protein S20	NA	NA	NA	NA
AZX90882.1\|2920178_2920955_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA
AZX90883.1\|2921545_2922496_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90884.1\|2924879_2925992_-	malate dehydrogenase	NA	NA	NA	NA
AZX90885.1\|2926048_2926999_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_25

2957385 : 3001076

Planktothrix_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX90914.1\|2957385_2958336_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90915.1\|2958322_2958568_-	hypothetical protein	NA	NA	NA	NA
AZX90916.1\|2958456_2959353_-	inositol monophosphatase	NA	NA	NA	NA
AZX90917.1\|2961630_2963856_+	glycosyl hydrolase	NA	NA	NA	NA
AZX90918.1\|2964020_2965109_+	methionine import ATP-binding protein MetN	G9BWD6	Planktothrix_phage	8.7e-32	36.4
AZX90919.1\|2965065_2965719_+	ABC transporter permease	NA	NA	NA	NA
AZX90920.1\|2965766_2966564_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX90921.1\|2967095_2968046_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90922.1\|2968126_2969275_+	alcohol dehydrogenase	NA	NA	NA	NA
AZX90923.1\|2969331_2970282_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90924.1\|2970268_2970487_-	hypothetical protein	NA	NA	NA	NA
AZX90925.1\|2970380_2970686_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AZX90926.1\|2970714_2971149_-	DUF126 domain-containing protein	NA	NA	NA	NA
AZX90927.1\|2971150_2972395_-	DUF521 domain-containing protein	NA	NA	NA	NA
AZX90928.1\|2972391_2973102_-	FadR family transcriptional regulator	NA	NA	NA	NA
AZX92018.1\|2973116_2974028_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX90929.1\|2974390_2974795_+	hypothetical protein	NA	NA	NA	NA
AZX90930.1\|2974791_2975250_+	hypothetical protein	NA	NA	NA	NA
AZX90931.1\|2975256_2976165_+	hypothetical protein	NA	NA	NA	NA
AZX92019.1\|2976161_2977028_+	sugar ABC transporter permease	NA	NA	NA	NA
AZX90932.1\|2977014_2977842_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
AZX90933.1\|2977852_2978980_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-23	32.3
AZX90934.1\|2980057_2981296_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90935.1\|2981337_2982600_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX90936.1\|2982606_2983359_+	DNA-binding protein	NA	NA	NA	NA
AZX90937.1\|2983410_2983596_-	hypothetical protein	NA	NA	NA	NA
AZX92020.1\|2983871_2984336_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA
AZX90938.1\|2984367_2985027_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
AZX90939.1\|2985171_2987280_+	AsmA family protein	NA	NA	NA	NA
AZX90940.1\|2987276_2988227_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90941.1\|2988330_2988951_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZX92021.1\|2989054_2989795_+	oxidoreductase	NA	NA	NA	NA
AZX90942.1\|2990929_2992054_-	hypothetical protein	NA	NA	NA	NA
AZX90943.1\|2992099_2992468_-	hypothetical protein	NA	NA	NA	NA
AZX90944.1\|2992709_2993660_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90945.1\|2994695_2995238_-	hypothetical protein	NA	NA	NA	NA
AZX90946.1\|2995442_2995637_+	hypothetical protein	NA	NA	NA	NA
AZX90947.1\|2995623_2996574_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX90948.1\|2996570_2997536_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZX90949.1\|2997605_2998442_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	1.6e-33	33.3
AZX90950.1\|2998918_3000064_+	porin	NA	NA	NA	NA
AZX90951.1\|3000125_3001076_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_26

3234587 : 3269425

Erwinia_phage(20.0%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX91133.1\|3234587_3235538_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91134.1\|3235982_3236294_-	cell division protein ZapA	NA	NA	NA	NA
AZX91135.1\|3236293_3236824_-	hypothetical protein	NA	NA	NA	NA
AZX91136.1\|3236986_3237937_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91137.1\|3238226_3238691_+	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA
AZX91138.1\|3238705_3240211_+	tripartite tricarboxylate transporter permease	NA	NA	NA	NA
AZX91139.1\|3240464_3242072_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA
AZX91140.1\|3242127_3243033_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZX91141.1\|3243473_3244424_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91142.1\|3244522_3245473_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91143.1\|3245554_3246136_-	ATP:cob(I)alamin adenosyltransferase	NA	NA	NA	NA
AZX92040.1\|3246560_3246866_+	RND transporter	NA	NA	NA	NA
AZX91144.1\|3246879_3248214_-	HslU--HslV peptidase ATPase subunit	A0A191ZC11	Erwinia_phage	3.5e-43	29.6
AZX91145.1\|3248235_3248775_-	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA
AZX91146.1\|3248922_3249387_-	RNA polymerase-binding protein DksA	NA	NA	NA	NA
AZX91147.1\|3249529_3250645_-	GTP-binding protein	NA	NA	NA	NA
AZX91148.1\|3250921_3251425_-	transcriptional repressor	NA	NA	NA	NA
AZX91149.1\|3251562_3251763_+	hypothetical protein	NA	NA	NA	NA
AZX91150.1\|3251753_3252476_+	metal ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.1e-11	30.0
AZX91151.1\|3252472_3253369_+	metal ABC transporter permease	NA	NA	NA	NA
AZX91152.1\|3253365_3254301_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX92041.1\|3254306_3254930_+	DUF1007 domain-containing protein	NA	NA	NA	NA
AZX91153.1\|3254920_3255889_+	nickel transporter	NA	NA	NA	NA
AZX91154.1\|3255937_3258079_+	TonB-dependent receptor	NA	NA	NA	NA
AZX91155.1\|3258091_3259072_-	tyrosine recombinase XerC	A0A166YH27	Gordonia_phage	3.3e-14	30.5
AZX91156.1\|3259086_3259779_-	DUF484 domain-containing protein	NA	NA	NA	NA
AZX91157.1\|3259805_3260717_-	diaminopimelate epimerase	NA	NA	NA	NA
AZX91158.1\|3260759_3261650_-	acyltransferase	NA	NA	NA	NA
AZX91159.1\|3261646_3262501_-	lipid A biosynthesis lauroyl acyltransferase	NA	NA	NA	NA
AZX91160.1\|3262649_3263948_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.6e-125	60.9
AZX91161.1\|3264058_3264310_+	DUF1289 domain-containing protein	NA	NA	NA	NA
AZX91162.1\|3264389_3265430_+	glycosyltransferase family 1 protein	NA	NA	NA	NA
AZX91163.1\|3265709_3267128_+	adenosylhomocysteinase	S4VPF6	Pandoravirus	8.7e-40	29.4
AZX91164.1\|3267198_3267534_+\|holin	phage holin family protein	NA	NA	NA	NA
AZX91165.1\|3267533_3268376_+	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA
AZX91166.1\|3268474_3269425_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_27

3281254 : 3332133

Planktothrix_phage(33.33%)

integrase,transposase,protease,tRNA

attL 3314929:3314947|attR 3334817:3334835

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX91175.1\|3281254_3282205_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX92043.1\|3282517_3283996_+	phospholipase D family protein	NA	NA	NA	NA
AZX91176.1\|3284002_3285112_-	molybdenum import ATP-binding protein ModC	G9BWD6	Planktothrix_phage	7.5e-23	34.5
AZX91177.1\|3285123_3285804_-	molybdate ABC transporter permease subunit	NA	NA	NA	NA
AZX91178.1\|3285825_3286581_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX92044.1\|3286716_3287601_-	alpha/beta hydrolase	NA	NA	NA	NA
AZX91179.1\|3287688_3288270_+	hypothetical protein	NA	NA	NA	NA
AZX91180.1\|3288362_3288485_-	hypothetical protein	NA	NA	NA	NA
AZX91181.1\|3288530_3288830_-	DUF4148 domain-containing protein	NA	NA	NA	NA
AZX92045.1\|3288981_3289407_-	hypothetical protein	NA	NA	NA	NA
AZX91182.1\|3291613_3292117_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AZX91183.1\|3292132_3293083_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91184.1\|3293069_3293267_-	hypothetical protein	NA	NA	NA	NA
AZX91185.1\|3293610_3294384_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX91186.1\|3294516_3295527_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX91187.1\|3295678_3297334_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA
AZX91188.1\|3297388_3297730_-	cupin domain-containing protein	NA	NA	NA	NA
AZX91189.1\|3297743_3299183_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
AZX91190.1\|3299315_3300131_-	MerR family transcriptional regulator	NA	NA	NA	NA
AZX91191.1\|3300149_3300338_+	hypothetical protein	NA	NA	NA	NA
AZX91192.1\|3300324_3301275_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91193.1\|3302662_3303610_+	hypothetical protein	NA	NA	NA	NA
AZX91194.1\|3303836_3304577_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZX91195.1\|3304662_3305613_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91196.1\|3307054_3308626_-	winged helix family transcriptional regulator	NA	NA	NA	NA
AZX91197.1\|3308958_3310812_+	hypothetical protein	NA	NA	NA	NA
AZX91198.1\|3310856_3313421_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
AZX91199.1\|3313839_3314790_+\|transposase	IS481 family transposase	NA	NA	NA	NA
3314929:3314947	attL	NA	NA	NA	NA
AZX91200.1\|3317655_3318150_-	DUF4276 domain-containing protein	NA	NA	NA	NA
AZX91201.1\|3318166_3319117_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91202.1\|3319103_3319304_-	hypothetical protein	NA	NA	NA	NA
AZX91203.1\|3319300_3320512_-	chromosome segregation protein SMC	NA	NA	NA	NA
AZX91204.1\|3320527_3323479_-	restriction endonuclease subunit M	G8I4P9	Mycobacterium_phage	2.9e-21	25.1
AZX91205.1\|3323480_3326600_-	restriction endonuclease	NA	NA	NA	NA
AZX92046.1\|3326596_3326737_-	DEAD/DEAH box helicase	NA	NA	NA	NA
AZX91206.1\|3326747_3327794_-	Fic family protein	NA	NA	NA	NA
AZX91207.1\|3328135_3329263_-\|integrase	site-specific integrase	A0A1B0VMI6	Pseudomonas_phage	1.4e-48	33.6
AZX91208.1\|3329542_3330634_-	redox-regulated ATPase YchF	NA	NA	NA	NA
AZX91209.1\|3330706_3331489_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AZX91210.1\|3331485_3332133_-\|tRNA	peptidyl-tRNA hydrolase	NA	NA	NA	NA
3334817:3334835	attR	NA	NA	NA	NA

DBSCAN-SWA_28

3381020 : 3434761

Staphylococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX91247.1\|3381020_3381971_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91248.1\|3382375_3383020_-	urease accessory protein UreG	NA	NA	NA	NA
AZX91249.1\|3383044_3383629_-	urease accessory protein UreF	NA	NA	NA	NA
AZX91250.1\|3383729_3384347_-	urease accessory protein UreE	NA	NA	NA	NA
AZX91251.1\|3384349_3386065_-	urease subunit alpha	NA	NA	NA	NA
AZX91252.1\|3386061_3386370_-	urease subunit beta	NA	NA	NA	NA
AZX91253.1\|3386386_3387022_-	urease accessory protein UreJ	NA	NA	NA	NA
AZX91254.1\|3387048_3387351_-	urease subunit gamma	NA	NA	NA	NA
AZX91255.1\|3387451_3388306_-	urease accessory protein UreD	NA	NA	NA	NA
AZX91256.1\|3388887_3389160_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AZX91257.1\|3389577_3389985_-	GFA family protein	NA	NA	NA	NA
AZX91258.1\|3390354_3391149_-	GntR family transcriptional regulator	NA	NA	NA	NA
AZX91259.1\|3391249_3392485_+	methylaspartate ammonia-lyase	NA	NA	NA	NA
AZX91260.1\|3392553_3393570_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX91261.1\|3393566_3394958_+	MmgE/PrpD family protein	NA	NA	NA	NA
AZX91262.1\|3394954_3396151_+	MFS transporter	NA	NA	NA	NA
AZX91263.1\|3396147_3397686_-	SpoVR family protein	NA	NA	NA	NA
AZX91264.1\|3397682_3398942_-	hypothetical protein	NA	NA	NA	NA
AZX91265.1\|3400882_3401833_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91266.1\|3402599_3403694_-	CoA transferase	NA	NA	NA	NA
AZX91267.1\|3403686_3405021_-	CoA ligase	NA	NA	NA	NA
AZX91268.1\|3404974_3405658_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZX91269.1\|3405683_3406847_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
AZX91270.1\|3406843_3407845_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZX91271.1\|3407844_3408717_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZX91272.1\|3408713_3409463_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.9e-09	27.8
AZX91273.1\|3409459_3410251_-	ABC transporter ATP-binding protein	A0A1M7XV31	Cedratvirus	1.7e-08	29.4
AZX91274.1\|3410247_3411387_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX91275.1\|3411695_3412448_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
AZX91276.1\|3412481_3413264_+	enoyl-CoA hydratase	NA	NA	NA	NA
AZX91277.1\|3413267_3413657_+	DNA-binding protein	NA	NA	NA	NA
AZX91278.1\|3414796_3415660_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA
AZX91279.1\|3415695_3416784_+	hypothetical protein	NA	NA	NA	NA
AZX91280.1\|3416780_3417731_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91281.1\|3417717_3418086_-	hypothetical protein	NA	NA	NA	NA
AZX91282.1\|3418084_3421063_+	hypothetical protein	NA	NA	NA	NA
AZX91283.1\|3421989_3422868_+	fatty acid desaturase	NA	NA	NA	NA
AZX91284.1\|3424816_3425767_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91285.1\|3425763_3426231_-	ribonuclease HI	J9Q745	Salmonella_phage	5.6e-36	50.7
AZX91286.1\|3426273_3427044_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AZX91287.1\|3427064_3427865_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
AZX91288.1\|3427875_3429285_+	lytic transglycosylase	NA	NA	NA	NA
AZX91289.1\|3429379_3430165_+	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA
AZX92049.1\|3430404_3431421_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AZX91290.1\|3431528_3431921_-	OsmC family peroxiredoxin	NA	NA	NA	NA
AZX91291.1\|3432058_3432739_+	DUF533 domain-containing protein	NA	NA	NA	NA
AZX91292.1\|3432743_3433742_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX91293.1\|3433810_3434761_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_29

3440916 : 3500214

Acinetobacter_phage(27.27%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX91297.1\|3440916_3442680_+\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	5.0e-162	50.0
AZX91298.1\|3442791_3443670_+	septum site-determining protein MinC	NA	NA	NA	NA
AZX91299.1\|3443782_3444598_+	septum site-determining protein MinD	NA	NA	NA	NA
AZX91300.1\|3444601_3444853_+	cell division topological specificity factor	NA	NA	NA	NA
AZX92050.1\|3444937_3445954_-\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AZX91301.1\|3446284_3446506_-	hypothetical protein	NA	NA	NA	NA
AZX91302.1\|3448866_3449784_-	EamA/RhaT family transporter	NA	NA	NA	NA
AZX91303.1\|3450281_3451490_-	ABC transporter permease	NA	NA	NA	NA
AZX91304.1\|3451569_3453141_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX91305.1\|3453258_3454194_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
AZX91306.1\|3454382_3455327_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	8.4e-07	23.2
AZX91307.1\|3455395_3455611_-	hypothetical protein	NA	NA	NA	NA
AZX91308.1\|3455894_3461612_+	excinuclease ABC subunit A	A0A1B1IVR3	uncultured_Mediterranean_phage	1.0e-195	39.5
AZX91309.1\|3461617_3462745_+	aminodeoxychorismate synthase, component I	S4VT78	Pandoravirus	3.8e-38	37.8
AZX91310.1\|3462800_3463427_+	aminotransferase	NA	NA	NA	NA
AZX92051.1\|3463698_3464715_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AZX91311.1\|3464810_3465521_-	oxidoreductase	NA	NA	NA	NA
AZX92052.1\|3465517_3466507_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX91312.1\|3466638_3468234_+	acyl-CoA synthetase	NA	NA	NA	NA
AZX91313.1\|3468236_3468974_+	GntR family transcriptional regulator	NA	NA	NA	NA
AZX91314.1\|3469129_3470002_-\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	NA	NA	NA	NA
AZX91315.1\|3470270_3471491_+	MFS transporter	NA	NA	NA	NA
AZX91316.1\|3471487_3472147_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA
AZX91317.1\|3472218_3472851_+	pyridoxine/pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
AZX91318.1\|3472880_3473399_+	flavin reductase	NA	NA	NA	NA
AZX91319.1\|3473409_3474519_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
AZX91320.1\|3474565_3475420_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
AZX91321.1\|3475421_3476324_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZX91322.1\|3477546_3478497_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91323.1\|3480251_3481241_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91324.1\|3481416_3482205_-	indole-3-glycerol-phosphate synthase	A0A0P0IR83	Acinetobacter_phage	5.1e-66	53.0
AZX91325.1\|3482201_3483233_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	7.4e-73	42.7
AZX91326.1\|3483251_3483815_-	type 1 glutamine amidotransferase	A0A0P0IKJ1	Acinetobacter_phage	1.1e-65	62.1
AZX91327.1\|3483870_3485391_-	anthranilate synthase component I	S4VT78	Pandoravirus	9.0e-43	32.1
AZX91328.1\|3485654_3486359_-	phosphoglycolate phosphatase	NA	NA	NA	NA
AZX91329.1\|3486366_3487104_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
AZX91330.1\|3487209_3487584_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
AZX91331.1\|3487626_3488916_+	hypothetical protein	NA	NA	NA	NA
AZX91332.1\|3488912_3490082_+	ubiquinone biosynthesis protein UbiH	NA	NA	NA	NA
AZX91333.1\|3490078_3490918_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA
AZX91334.1\|3490977_3491913_+	hydroxyacid dehydrogenase	A0A1J0F959	Only_Syngen_Nebraska_virus	6.4e-15	27.7
AZX91335.1\|3491925_3492876_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91336.1\|3492974_3493937_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	4.6e-93	64.5
AZX91337.1\|3493968_3494328_-	dihydroneopterin aldolase	NA	NA	NA	NA
AZX91338.1\|3494452_3495355_+	NAD(P)/FAD-dependent oxidoreductase	G3MA85	Bacillus_virus	1.9e-08	24.0
AZX91339.1\|3495356_3497129_-	PDZ domain-containing protein	NA	NA	NA	NA
AZX91340.1\|3497163_3497940_+	enoyl-CoA hydratase	NA	NA	NA	NA
AZX91341.1\|3499263_3500214_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_30

3515152 : 3573225

Planktothrix_phage(12.5%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX91353.1\|3515152_3516103_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91354.1\|3516231_3517365_-	peptidase	NA	NA	NA	NA
AZX91355.1\|3517408_3518314_-	alpha/beta hydrolase	NA	NA	NA	NA
AZX91356.1\|3518316_3520017_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.0e-15	32.7
AZX91357.1\|3520013_3520934_-	ABC transporter permease	NA	NA	NA	NA
AZX91358.1\|3520941_3521919_-	ABC transporter permease	NA	NA	NA	NA
AZX91359.1\|3521977_3523012_-	succinylglutamate desuccinylase	NA	NA	NA	NA
AZX91360.1\|3524986_3525223_-	hypothetical protein	NA	NA	NA	NA
AZX91361.1\|3525349_3526213_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
AZX91362.1\|3526301_3527123_+	enoyl-CoA hydratase	NA	NA	NA	NA
AZX91363.1\|3527202_3527940_-	enoyl-CoA hydratase	NA	NA	NA	NA
AZX91364.1\|3527936_3528929_-	nitronate monooxygenase	NA	NA	NA	NA
AZX91365.1\|3529042_3529705_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZX91366.1\|3529749_3530898_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AZX91367.1\|3533221_3534172_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91368.1\|3534512_3535463_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91369.1\|3535561_3536512_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91370.1\|3536808_3537306_+	hypothetical protein	NA	NA	NA	NA
AZX91371.1\|3537348_3539124_+	copper resistance system multicopper oxidase	NA	NA	NA	NA
AZX92055.1\|3539170_3539998_+	copper resistance protein B	NA	NA	NA	NA
AZX91372.1\|3540004_3540739_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AZX91373.1\|3541908_3542703_-	IclR family transcriptional regulator	NA	NA	NA	NA
AZX91374.1\|3542992_3543583_+	cysteine dioxygenase	NA	NA	NA	NA
AZX91375.1\|3543616_3544945_-	amidase	NA	NA	NA	NA
AZX91376.1\|3545019_3546165_-	transporter	NA	NA	NA	NA
AZX91377.1\|3546276_3547275_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91378.1\|3547237_3547672_+	carbon monoxide dehydrogenase	NA	NA	NA	NA
AZX91379.1\|3549188_3550073_+	EamA/RhaT family transporter	NA	NA	NA	NA
AZX91380.1\|3550069_3551275_-	cardiolipin synthase ClsB	NA	NA	NA	NA
AZX91381.1\|3551271_3552132_-	endonuclease	NA	NA	NA	NA
AZX91382.1\|3552244_3554035_-\|tRNA	aspartate--tRNA ligase	A0A1V0SAC0	Catovirus	6.5e-08	25.5
AZX91383.1\|3554075_3554741_-	DUF502 domain-containing protein	A0A2I7S9X1	Vibrio_phage	6.7e-11	28.4
AZX91384.1\|3554741_3555050_-	FmdB family transcriptional regulator	NA	NA	NA	NA
AZX92056.1\|3555215_3556502_-	hypothetical protein	NA	NA	NA	NA
AZX91385.1\|3557935_3558886_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91386.1\|3560837_3562052_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA
AZX91387.1\|3562157_3563147_+	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	4.3e-38	37.7
AZX91388.1\|3563143_3563752_+	hydrolase	E3T535	Cafeteria_roenbergensis_virus	5.2e-10	26.1
AZX91389.1\|3563764_3564394_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
AZX91390.1\|3564390_3565011_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
AZX91391.1\|3565042_3565834_+	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	9.5e-20	27.4
AZX91392.1\|3566676_3567141_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
AZX91393.1\|3567159_3568086_+	HPr kinase/phosphorylase	NA	NA	NA	NA
AZX91394.1\|3568139_3569426_-	cytochrome c	NA	NA	NA	NA
AZX91395.1\|3570356_3571229_+	RNase adaptor protein RapZ	A0A1P8D5W0	Corynebacterium_phage	2.4e-08	34.5
AZX91396.1\|3571225_3572176_+	septal ring lytic transglycosylase RlpA family protein	F5B3X9	Synechococcus_phage	6.9e-17	47.2
AZX91397.1\|3572274_3573225_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_31

4005436 : 4070348

Planktothrix_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZX91785.1\|4005436_4005922_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91786.1\|4006140_4007121_+	protein BugT	NA	NA	NA	NA
AZX91787.1\|4007387_4008197_+	Pertussis toxin subunit 1	NA	NA	NA	NA
AZX91788.1\|4008236_4008917_+	Pertussis toxin subunit 2	NA	NA	NA	NA
AZX91789.1\|4008910_4009369_+	pertussis toxin subunit 4	NA	NA	NA	NA
AZX91790.1\|4009380_4009743_+	Pertussis toxin subunit 5	NA	NA	NA	NA
AZX91791.1\|4009825_4010509_+	Pertussis toxin subunit 3	NA	NA	NA	NA
AZX91792.1\|4010564_4010873_+	type IV secretion protein A	NA	NA	NA	NA
AZX91793.1\|4010891_4011206_+	type IV secretion protein B	NA	NA	NA	NA
AZX91794.1\|4011202_4013677_+	type IV secretion system protein PtlC	NA	NA	NA	NA
AZX91795.1\|4013684_4015076_+	type IV secretion system protein PtlD	NA	NA	NA	NA
AZX91796.1\|4015072_4015258_+	type IV secretion protein I	NA	NA	NA	NA
AZX91797.1\|4015236_4015938_+	type IV secretion protein E	NA	NA	NA	NA
AZX91798.1\|4015934_4016756_+	type IV secretion system protein PtlF	NA	NA	NA	NA
AZX92077.1\|4016736_4017861_+	type IV secretion system protein PtlG	NA	NA	NA	NA
AZX91799.1\|4017853_4018873_+	type IV secretion protein H	NA	NA	NA	NA
AZX91800.1\|4019078_4020113_-	EamA/RhaT family transporter	NA	NA	NA	NA
AZX92078.1\|4020213_4021005_+	AraC family transcriptional regulator	NA	NA	NA	NA
AZX91801.1\|4021087_4021462_+	DUF1232 domain-containing protein	NA	NA	NA	NA
AZX91802.1\|4021439_4022849_+	DUF2868 domain-containing protein	NA	NA	NA	NA
AZX91803.1\|4022841_4024224_+	DUF3482 domain-containing protein	A0A0R6PHS5	Moraxella_phage	9.9e-57	38.9
AZX91804.1\|4024558_4026163_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZX91805.1\|4026198_4027212_+	ABC transporter permease	NA	NA	NA	NA
AZX91806.1\|4027222_4028149_+	ABC transporter permease	NA	NA	NA	NA
AZX91807.1\|4028539_4029490_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91808.1\|4029659_4030886_+	bifunctional glutamate N-acetyltransferase/amino-acid N-acetyltransferase	NA	NA	NA	NA
AZX91809.1\|4031085_4031952_+	DUF815 domain-containing protein	NA	NA	NA	NA
AZX91810.1\|4031944_4032907_+	NUDIX domain-containing protein	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	1.9e-06	53.4
AZX91811.1\|4033007_4033958_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91812.1\|4034056_4035007_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91813.1\|4035105_4036056_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZX91814.1\|4036052_4037546_-	RND transporter	NA	NA	NA	NA
AZX91815.1\|4037542_4040650_-	multidrug transporter subunit MdtC	NA	NA	NA	NA
AZX91816.1\|4040646_4043715_-	multidrug transporter subunit MdtB	NA	NA	NA	NA
AZX91817.1\|4043711_4044962_-	multidrug transporter subunit MdtA	NA	NA	NA	NA
AZX91818.1\|4045142_4045904_-	cell division protein ZapD	NA	NA	NA	NA
AZX91819.1\|4045936_4046587_-	dephospho-CoA kinase	NA	NA	NA	NA
AZX91820.1\|4046589_4047429_-	prepilin peptidase	NA	NA	NA	NA
AZX91821.1\|4047669_4048413_+	hypothetical protein	NA	NA	NA	NA
AZX91822.1\|4048495_4048843_-	LuxR family transcriptional regulator	NA	NA	NA	NA
AZX91823.1\|4048940_4049783_-	pantoate--beta-alanine ligase	NA	NA	NA	NA
AZX91824.1\|4049827_4050715_-	segregation/condensation protein A	NA	NA	NA	NA
AZX91825.1\|4050741_4050930_-	DUF3460 domain-containing protein	NA	NA	NA	NA
AZX91826.1\|4051027_4052485_+	MFS transporter	NA	NA	NA	NA
AZX91827.1\|4052471_4053998_+	glycerol kinase	NA	NA	NA	NA
AZX91828.1\|4054016_4054484_-	hypothetical protein	NA	NA	NA	NA
AZX91829.1\|4054483_4055506_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZX91830.1\|4055626_4056367_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.4e-35	39.7
AZX91831.1\|4056421_4057522_-	amino acid ABC transporter permease	NA	NA	NA	NA
AZX91832.1\|4057523_4058714_-	amino acid ABC transporter permease	NA	NA	NA	NA
AZX91833.1\|4058833_4059850_-	amino acid ABC transporter substrate-binding protein	A0A1B1IT51	uncultured_Mediterranean_phage	1.0e-71	42.1
AZX91834.1\|4060168_4060840_+	cell division ATP-binding protein FtsE	G9BWD6	Planktothrix_phage	9.5e-29	38.2
AZX91835.1\|4060836_4061745_+	ABC transporter permease	NA	NA	NA	NA
AZX91836.1\|4061956_4062604_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA
AZX91837.1\|4066455_4067532_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
AZX91838.1\|4067542_4068352_-	transcriptional regulator	NA	NA	NA	NA
AZX91839.1\|4068441_4069215_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AZX91840.1\|4069397_4070348_+\|transposase	IS481 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP025377

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection