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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025383 Bordetella pertussis strain J184 chromosome, complete genome 4 crisprs csa3,cas3,DinG,DEDDh 0 0 28 0

Results visualization

1. CP025383
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025383_1 250590-250674 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025383_2 432032-432125 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025383_3 996354-996448 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025383_4 3429341-3429450 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 122073 110 Planktothrix_phage(16.67%) tRNA,protease,transposase NA
DBSCAN-SWA_2 164892 : 225403 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) tRNA,protease,transposase NA
DBSCAN-SWA_3 233335 : 286922 47 Bacillus_phage(25.0%) tRNA,protease,transposase NA
DBSCAN-SWA_4 390855 : 448364 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_5 620800 : 721263 110 uncultured_Caudovirales_phage(13.79%) tRNA,tail,terminase,transposase NA
DBSCAN-SWA_6 748188 : 821350 58 Streptococcus_phage(16.67%) transposase NA
DBSCAN-SWA_7 854097 : 903361 40 Vibrio_phage(33.33%) holin,transposase NA
DBSCAN-SWA_8 912973 : 977913 60 Bacillus_phage(18.18%) transposase NA
DBSCAN-SWA_9 997318 : 1060469 53 Enterococcus_phage(16.67%) transposase NA
DBSCAN-SWA_10 1066453 : 1134615 54 uncultured_Mediterranean_phage(25.0%) tRNA,holin,transposase NA
DBSCAN-SWA_11 1316904 : 1385391 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_12 1445882 : 1501370 56 Mollivirus(16.67%) protease,transposase NA
DBSCAN-SWA_13 1540693 : 1598775 60 Planktothrix_phage(15.38%) tRNA,protease,transposase NA
DBSCAN-SWA_14 1653977 : 1725131 54 Ectocarpus_siliculosus_virus(10.0%) transposase NA
DBSCAN-SWA_15 1745922 : 1807270 52 uncultured_Caudovirales_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_16 2197627 : 2252863 50 Lake_Baikal_phage(25.0%) protease,transposase NA
DBSCAN-SWA_17 2255970 : 2310240 49 Klosneuvirus(14.29%) tRNA,transposase NA
DBSCAN-SWA_18 2349353 : 2412930 49 uncultured_Caudovirales_phage(11.11%) protease,transposase NA
DBSCAN-SWA_19 2684916 : 2725584 44 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_20 2781049 : 2853919 59 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_21 2857062 : 2923871 48 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_22 2954257 : 2993446 38 Planktothrix_phage(50.0%) transposase NA
DBSCAN-SWA_23 2996997 : 3056650 58 Bacillus_virus(22.22%) tRNA,transposase NA
DBSCAN-SWA_24 3232510 : 3267348 36 Erwinia_phage(20.0%) holin,transposase NA
DBSCAN-SWA_25 3279177 : 3330056 40 Planktothrix_phage(33.33%) tRNA,integrase,protease,transposase attL 3312852:3312870|attR 3332740:3332758
DBSCAN-SWA_26 3378943 : 3432684 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_27 3438839 : 3498139 48 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_28 3513077 : 3571150 47 Planktothrix_phage(12.5%) tRNA,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage