CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP025480	Bordetella pertussis strain E087 chromosome, complete genome	5 crisprs	csa3,cas3,DinG,DEDDh	0	0	29	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP025480_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025480_1

250591-250675

Orphan

Consensus_repeat	Method
GGTGCCTGTCCCCGCGGGGACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025480_1

>merge|CP025480|1|250591-250675|CRISPRCasFinder
GGTGCCTGTCCCCGCGGGGACAGATACCGTCTTGGCCGTCAAGCGTTCATGGCGTATGACAGGGTGCCTGTCCCCGCGGGGACAG

>CP025480|1|1|250591-250675|CRISPRCasFinder
GGTGCCTGTCCCCGCGGGGACAG	ATACCGTCTTGGCCGTCAAGCGTTCATGGCGTATGACAG
GGTGCCTGTCCCCGCGGGGACAG

Protein	Signature genes	Signature genes Name	Protein_function
CP025480.1\|AZY44250.1\|248576_249278_-\|DnaA-regulatory-inactivator-Hda	unknown	unknown	gnl\|CDD\|236347
CP025480.1\|AZY44242.1\|238116_238527_+\|4-carboxymuconolactone-decarboxylase	unknown	unknown	gnl\|CDD\|131478
CP025480.1\|AZY44253.1\|251623_253513_-\|DNA-mismatch-repair-protein-MutL	unknown	unknown	gnl\|CDD\|234630
CP025480.1\|AZY44243.1\|239548_240292_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
CP025480.1\|AZY44249.1\|247881_248580_-\|HAD-IB-family-hydrolase	unknown	unknown	gnl\|CDD\|319796
CP025480.1\|AZY44244.1\|240335_241379_-\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270320
CP025480.1\|AZY44246.1\|245062_246019_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
CP025480.1\|AZY44247.1\|246037_246529_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl\|CDD\|172582
CP025480.1\|AZY44254.1\|253599_254238_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182775
CP025480.1\|AZY44248.1\|246525_247881_-\|polynucleotide-adenylyltransferase-PcnB	unknown	unknown	gnl\|CDD\|130997
CP025480.1\|AZY44260.1\|260962_262717_+\|gamma-glutamyltransferase	unknown	unknown	gnl\|CDD\|223482
CP025480.1\|AZY44245.1\|241549_243652_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|129868
CP025480.1\|AZY44257.1\|257792_258773_-\|AEC-family-transporter	unknown	unknown	gnl\|CDD\|223751
CP025480.1\|AZY44256.1\|256384_257776_+\|class-II-fumarate-hydratase	unknown	unknown	gnl\|CDD\|234779
CP025480.1\|AZY44259.1\|259956_260856_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176107
CP025480.1\|AZY44252.1\|250685_251627_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	unknown	unknown	gnl\|CDD\|234626
CP025480.1\|AZY47447.1\|254380_255625_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|182376
CP025480.1\|AZY44258.1\|258908_259892_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE	unknown	unknown	gnl\|CDD\|270295
CP025480.1\|AZY44255.1\|255696_256233_-\|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl\|CDD\|223873
CP025480.1\|AZY44251.1\|249530_250580_+\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439

Protein	Function_ID	Function_description	E-value
CP025480.1\|AZY44250.1\|248576_249278_-\|DnaA-regulatory-inactivator-Hda	gnl\|CDD\|236347	PRK08903, PRK08903, DnaA regulatory inactivator Hda; Validated.	2.81236e-100
CP025480.1\|AZY44242.1\|238116_238527_+\|4-carboxymuconolactone-decarboxylase	gnl\|CDD\|131478	TIGR02425, putative_gamma-carboxymuconolactone_decarboxylase, 4-carboxymuconolactone decarboxylase. Members of this family are 4-carboxymuconolactone decarboxylase, which catalyzes the third step in the catabolism of protocatechuate (and therefore the fourth step in the catabolism of para-hydroxybenzoate, of 3-hydroxybenzoate, of vanillate, etc.). Most members of this family are encoded within protocatechuate catabolism operons. This protein is sometimes found as a fusion protein with other enzymes of the pathway, as in Rhodococcus opacus, Streptomyces avermitilis, and Caulobacter crescentus. [Energy metabolism, Other].	1.36265e-47
CP025480.1\|AZY44253.1\|251623_253513_-\|DNA-mismatch-repair-protein-MutL	gnl\|CDD\|234630	PRK00095, mutL, DNA mismatch repair endonuclease MutL.	0
CP025480.1\|AZY44243.1\|239548_240292_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	5.58304e-45
CP025480.1\|AZY44249.1\|247881_248580_-\|HAD-IB-family-hydrolase	gnl\|CDD\|319796	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C. This family includes Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C, PgpC (previously named yfhB) which catalyzes the dephosphorylation of phosphatidylglycerol-phosphate (PGP) to phosphatidylglycerol (PG). This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.91431e-64
CP025480.1\|AZY44244.1\|240335_241379_-\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270320	cd13602, PBP2_TRAP_BpDctp6_7, Substrate-binding domain of a pyroglutamic acid binding DctP subfamily of the tripartite ATP-independent periplasmic transporters; contains the type 2 periplasmic binding protein fold. DctP6 and DctP7 groups of the TRAP transporters that involved in pyroglutamic acid transport. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.99378e-85
CP025480.1\|AZY44246.1\|245062_246019_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	6.01101e-118
CP025480.1\|AZY44247.1\|246037_246529_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl\|CDD\|172582	PRK14092, PRK14092, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase.	2.78166e-87
CP025480.1\|AZY44254.1\|253599_254238_+\|hypothetical-protein	gnl\|CDD\|182775	PRK10847, PRK10847, DedA family protein.	1.10927e-69
CP025480.1\|AZY44248.1\|246525_247881_-\|polynucleotide-adenylyltransferase-PcnB	gnl\|CDD\|130997	TIGR01942, pcnB, poly(A) polymerase. This model describes the pcnB family of poly(A) polymerases (also known as plasmid copy number protein). These enzymes sequentially add adenosine nucleotides to the 3' end of RNAs, targeting them for degradation by the cell. This was originally described for anti-sense RNAs, but was later demonstrated for mRNAs as well. Members of this family are as yet limited to the gamma- and beta-proteobacteria, with putative members in the Chlamydiacae and spirochetes. This family has homology to tRNA nucleotidyltransferase (cca).	4.58369e-147
CP025480.1\|AZY44260.1\|260962_262717_+\|gamma-glutamyltransferase	gnl\|CDD\|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	0
CP025480.1\|AZY44245.1\|241549_243652_+\|hypothetical-protein	gnl\|CDD\|129868	TIGR00786, TRAP_transporter_permease_protein_SiaT, TRAP transporter, DctM subunit. The Tripartite ATP-independent Periplasmic Transporter (TRAP-T) Family (TC 2.A.56)- DctM subunit TRAP-T family permeases generally consist of three components, and these systems have so far been found in Gram-negative bacteria, Gram-postive bacteria and archaea. Only one member of the family has been both sequenced and functionally characterized. This system is the DctPQM system of Rhodobacter capsulatus (Forward et al., 1997). DctP is a periplasmic dicarboxylate (malate, fumarate, succinate) binding receptor that is biochemically well-characterized. DctQ is an integral cytoplasmic membrane protein with 4 putative transmembrane a-helical spanners (TMSs). DctM is a second integral cytoplasmic membrane protein with 12 putative TMSs. These proteins have been shown to be both necessary and sufficient for the proton motive force-dependent uptake of dicarboxylates into R. capsulatus. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.77055e-96
CP025480.1\|AZY44257.1\|257792_258773_-\|AEC-family-transporter	gnl\|CDD\|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	1.13912e-41
CP025480.1\|AZY44256.1\|256384_257776_+\|class-II-fumarate-hydratase	gnl\|CDD\|234779	PRK00485, fumC, fumarate hydratase; Reviewed.	0
CP025480.1\|AZY44259.1\|259956_260856_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176107	cd08415, PBP2_LysR_opines_like, The C-terminal substrate-domain of LysR-type transcriptional regulators involved in the catabolism of opines and that of related regulators, contains the type 2 periplasmic binding fold. This CD includes the C-terminal substrate-domain of LysR-type transcriptional regulators, OccR and NocR, involved in the catabolism of opines and that of LysR for lysine biosynthesis which clustered together in phylogenetic trees. Opines, such as octopine and nopaline, are low molecular weight compounds found in plant crown gall tumors that are produced by the parasitic bacterium Agrobacterium. There are at least 30 different opines identified so far. Opines are utilized by tumor-colonizing bacteria as a source of carbon, nitrogen, and energy. NocR and OccR belong to the family of LysR-type transcriptional regulators that positively regulates the catabolism of nopaline and octopine, respectively. Both nopaline and octopalin are arginine derivatives. In Agrobacterium tumefaciens, NocR regulates expression of the divergently transcribed nocB and nocR genes of the nopaline catabolism (noc) region. OccR protein activates the occQ operon of the Ti plasmid in response to octopine. This operon encodes proteins required for the uptake and catabolism of octopine. The occ operon also encodes the TraR protein, which is a quorum-sensing transcriptional regulator of the Ti plasmid tra regulon. LysR is the transcriptional activator of lysA gene encoding diaminopimelate decarboxylase, an enzyme that catalyses the decarboxylation of diaminopimelate to produce lysine. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.62875e-38
CP025480.1\|AZY44252.1\|250685_251627_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	gnl\|CDD\|234626	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.	4.17279e-156
CP025480.1\|AZY47447.1\|254380_255625_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|182376	PRK10319, PRK10319, N-acetylmuramoyl-L-alanine amidase AmiA.	7.29619e-86
CP025480.1\|AZY44258.1\|258908_259892_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE	gnl\|CDD\|270295	cd13577, PBP2_BugE_Glu, Glutamate transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	4.35876e-158
CP025480.1\|AZY44255.1\|255696_256233_-\|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl\|CDD\|223873	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only].	2.28113e-54
CP025480.1\|AZY44251.1\|249530_250580_+\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0

>CP025480.1|AZY44251.1|249530_250580_+|phosphoribosylformylglycinamidine-cyclo-ligase
MTNQHSAPLTYRDAGVDIDAGDALVDRIKPLAARTMRPGVLAGIGGFGALFEVPKKFREPVLVSGTDGVGTKLRLAFDWNRHDTVGIDLVAMSVNDILVQGAEPLYFLDYFACGKLSVDTAAAVVGGIARGCELAGCALIGGETAEMPGMYPDGEYDLAGFAVGAVDKSAIIDGKSIQPGDVVLGLASSGAHSNGYSLVRKILERAGARPDQDFHGQPLVDVVMAPTRIYVKQVLAALDRHGPAIKGLAHITGGGLLDNVPRILQPGMAAQLQRDGWEMPKLFQWLQQQGSVADAEMHRVFNCGIGMVLVVAADQADAVAATLREQGEIVNRIGEIVPQQDGMAQTVVV
>CP025480.1|AZY44250.1|248576_249278_-|DnaA-regulatory-inactivator-Hda
MNRQLLLDVLPAPAPALNNYIAGPNGQALAAAHALTAGRAIYLWGPAGCGRTHLLRGLSARPEAIYIDAARAAQSLRELAEADSTAPMPRLVAVDDVHRMDDARQAGLFALYNRWRESAATGRAFALAVSGDRAPMSLPLREDLRTRLGWDLVFRLDPLSDADKLAALTAQAAERGLQLAPEVINWMLTHHERDIRKLAALLDALDRYSLATGRPITIPLLRAMLADPHSQAT
>CP025480.1|AZY44249.1|247881_248580_-|HAD-IB-family-hydrolase
MTTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIAQARGWQVIDLFDHLEDAKS
>CP025480.1|AZY44248.1|246525_247881_-|polynucleotide-adenylyltransferase-PcnB
MITETIRKFVGRLFAPALRGPQRIGAERHGIDRRNVSRHAIKVCDVLRQHGYEAYIVGGAVRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPASDDQETDEHGRILRDNVFGSQEEDAARRDFTMNALYYDPHTEEVIDYHQGVQDLKKRQVRIIGDPVKRYREDPVRMLRAVRFAAKLNGSIDTATRQPIRTMASLIENVPASRLFDEMLKLLTCGHAMDCLRQLRNDGLHHGLLPLLDVVLEQPGGENFVELALERTDARVRAGKTISPSFLFAALLWQLVDVRWKQLRAQGEHNIPALVQAADSVLDEQTEKLAIQRRFSSDMREIWFMQPRFERRAGKTIYRMLEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANGDDATRAEMIEETAHLPRETGDAPAQKRRRPRRRPSNRPREPQ
>CP025480.1|AZY44247.1|246037_246529_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MNGSPASTLAYVGLGASLGDAAATLRSVLAELAAAPGILACKASRLYRTAPVEAQGPDFVNAVAALDTTLAPLDLLDLLQALEQRHGRERPYRNAPRTLDLDLLLYGEQAIDHPRLSVPHPRMHERAFVLAPLCELVPALRLAQGDCAALLAALEDQAIEPLR
>CP025480.1|AZY44246.1|245062_246019_+|tripartite-tricarboxylate-transporter-substrate-binding-protein
MKKRIWGTLLAAAMTVGSGAAHAGYPDKAVRIVVPFAAGGGVDALARPFAKELGDILGQSIVVENKPSNTGQIGATDVARAAADGYTLLLSSAAFATTPAFYPQVPYDPVKDFSPVMIMAAAPQVLVASNRFKAASLPDVLAQARQSDRINFALSASTGIQALATAMLAGQGGVTFMTIPYKGAGAAFMDLISGEVDLMIDNPASSLVHVRAGKLRVLATTGSKRMAILPDVPTVAETLPGFEARNWFVLAAPQGTPPAVIQKLNEASARALNTPAMRQMLERDGIDLVADSPAHAAAFLQDEIAKWGKVVKEGNLQP
>CP025480.1|AZY44245.1|241549_243652_+|hypothetical-protein
MSSIEMPAPVMPIEPAELAGASPYPLAIDQDFCLIRWMAAISRACGALATVALLLMALSMCYEIFSRYLFNAPTAWATEISGYLLVATVFFGLAAAQASNSHVQVELWIDRLSAPVRLRVELLCQWLALLFCVVLGWQMASFNVREYLNDTRDWGLLSTPQWMPELAVSVGMVVFCMSILVDIYRLSPPAQAWRRWLTPALLALLAAALVALGANAVPMAAGGRFDWGMALIVAALLACAWAWSGVRTLAHVVLVVGGCAVLYGLARGQSLGWVAFLLVASMMLLLFLGVRIGVALGLVGLFGVYFLLSRPQLSLLAERAWSSTNTFTLTAVPMFIFMGGLLLRSGITAGMFDALVRWFGRAPGGLAHASAGASAVFAAVSGSSLATAATLGKVACPDMIERGYSPRLTYGVAAAGATLGILIPPSIPMIIYGTTVGASVTHLFLAGMLPGLLLMACFMLGALVWALAVPGSAPVARAYTLREKLSASRGMVPFVAIIGAVLGSMYTGVATPTEAAAIGAVSAFVLCLVRRQLSWRALFEIAHDSAKVTALLLLIVVGAGIFSWVFDYLRLPREVVNLIQGADLSPALIVAAMVLAYLVLGMFVESIAMMLMTLPVTYPIAMSLGLDPIWFGVFLVLMIELGLITPPVGMVLFVLRSMNEKARFTDIIRGALPFVLIILLFLCLIYIYPQIVMWLPQQVK
>CP025480.1|AZY44244.1|240335_241379_-|C4-dicarboxylate-ABC-transporter-substrate-binding-protein
MSQRFPLPRGFQAALAAAALCTASWSGAAAAQTYDLTMAVITSPGDGYSILTASVPERVAKATDGKVKVTVSDSLVPPAQIATAVREGRVDMSAALHTYLAADEPRMGIFNLPGLINNIQEYKQVCDAFWCEDTRKIWKDKWNAIVLAEGAWCTQQLFSKDPIHKVEDFKGKRLRVHNPQTAEVVNALGGKPVAMPTTEIFPALERGVIDGLFISTCVGGSLEFWRIAKNVQNWSLGPINGWAILANPDSWQKLPADVQKQVQGAMDALQQEAFGNYDTFVSNAQQEMMKKGVTFWVAPEEERAKLMQQQYIGPSYEAWNKRAKQVGFDGPAYLDRVRTTLGKSASN
>CP025480.1|AZY44243.1|239548_240292_-|GntR-family-transcriptional-regulator
MPFPFCNTNRMTSPAAPEGEFKVQRVASVLRHSVTESIRNAILVGRFRPGERLPERELCEMTGVSRTLVREALRQLESEGLIVVIPHRGPVVERLSPEQARGIYQVREELEGLACQLFAEHATEPQLAALQEAFQALKRALTRGTPLEQIAAKNAFYQQLLDGAGNEALTTTLRLLNSRVMLLRSTSMQAPGRAKHSVAELSNLLQALVARDGKAARKAGSLHVRNAASVAIAILQDSLADAAATAE
>CP025480.1|AZY44242.1|238116_238527_+|4-carboxymuconolactone-decarboxylase
MALRPEFQTEQFQKGLAVRRAVVGDAYVDKSLNSADDLTASLQKLVTEYCWGEVWTRPGLERKTRSFLNLAMLIALNRPNELRLHLRGAINNGVTKDEIVEVVLQAAIYCGVPAALDAMKAVREVVETMEKEGAFA
>CP025480.1|AZY44252.1|250685_251627_-|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA
MTPRAIICLAGPTAAGKSASTLALAQRWPLEIINVDSATIYRGMDIGTAKPSAAERAQVPQHLLDIRDPAQSYSAAEFRADALRLIAEIHARGRIPLLAGGTMLYYKALREGLDDLPQADPALRAELEARAARLGWPALHAELALLDPATAARLSPNDSQRIQRALEICRLAGQPMSALLQGERRGDAPSPYRYVTLSLEPSERAALHARIAQRFDAMLAAGLVEEVRGLHARPDLHPGLPSVRCVGYRQMWSYLDGDIDLDTAREQGVAATRQLAKRQLTWLRAQPERVIIDCLAGDAVARTVDAMARALPD
>CP025480.1|AZY44253.1|251623_253513_-|DNA-mismatch-repair-protein-MutL
MSDRRPIATLPDLLISQIAAGEVIERPASVLKEILENAIDAGARAIEVRLEGGGIRRIAVTDDGSGIPPEELPLALTRHATSKIRSLDELESVASMGFRGEALASIASVADLTIISRTRGAEHAWQIDGGSLQVSPASGPPGTTIDVRQLFDRVPARRKFLRSEATEFGHCVDAMERIALAHPEVAFRLFHHDRAQRQWLPADHGQRIRDVLGAEFVGHVLPVLAAAGAIALMGMVTRPTAARARADRQYLYVNGRFVRDRTVSHALRSAYADVLHGDRQPAYVLYLDIDPGAVDVNVHPAKHEVRFRDSGAVHRFVSQVVGQTLAQTGGAEAVPAGVPDGAAPDTAYAGEPAAAAPGLAEPRAPYPAAYPSPGQSPYQGSPARPHTQVPFRLHGEPAGIPATDWQSLYRPLPGDAAPAATALRAAPATPLPTADEHPLGQALAQLHGIYILAQNSRGLVLVDMHAAHERVVYEQLKRALDDRALPRQDLLVPVVFHAAEKDVALVEEHETQLNELGFEMRPSGPASIAVRSVPALLARGDIESLARAVLRDLGAVGVSRLLTEQRNELLSTMACHGSVRANRRLTLEEMNALLRQMEITERADQCNHGRPTWVQWSVNDLDKLFLRGQ
>CP025480.1|AZY44254.1|253599_254238_+|hypothetical-protein
MLDFFNMVLHIDQTLGIWVEQYGVWVYLVLFLIVFAETGLVVLPFLPGDSLLFIAGAFGATGHMDPVLTAALLIVAAISGNTVNYTIGRYIGPRVFSMNLRFLDRNALMRTHAFYEKHGGKTIVMSRFIPVIRTFAPFVAGVADMRLARFQLFNIGGALLWVISLVAAGYFFGNIPLVREHLNTIVLIGLGAAIVPVVIGALVRLLQVRRGQ
>CP025480.1|AZY47447.1|254380_255625_-|N-acetylmuramoyl-L-alanine-amidase
MRTWPADEYTRVTLELDSELKAEHFTLENPHRLVVDIEGLSVNAALNDLVSKVRHDDPYIQGLRVAQNRPNVVRLVFDLKQSVAPQVFTLKPVADYQYRLVLDLYPKVAQDPLMAILNKQSGPDVDDPLARVLDEIARNQPAPDQPAAPLARGQEPAPALPAPPIKPLPAPGRSASRKRMLTIALDPGHGGEDPGAIGRSGLREKDVVLRIARRLKTLIDAQPYMRAYLTRDDDYFVPLHVRVQKARRVRADLFVSIHADAFIKPTANGSSVFALSERGASSTQARWLADKENAADLIGGVNLGSHDRQVAKVLLDLSTTAQINDSLKVGSAFLDEIKKINRLHKNRVEQAGFAVLKAPDIPSILVETAFISNPKEEALLRSAAHQEKLAQAMMTGIDRYFTANPPLARVGDVS
>CP025480.1|AZY44255.1|255696_256233_-|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MSAPPTTLCLHLPDEAATENLARQLAPLVDGRRGGQPGGQIHLQGDLGAGKTAFTRALLRECGIQGRIKSPSYALLESYKVSNLYFYHLDFYRFSDSREWLDAGFRDLLRDDAVVLIEWPERAAGLLPPPDLLISLAYADQGRDASLTAHTARGQTWLNAIVPPPTARSLPAPPPADA
>CP025480.1|AZY44256.1|256384_257776_+|class-II-fumarate-hydratase
MKTRTEKDTFGPIEVPEQHLWGAQTQRSLHFFAISTEKMPVPLVAAMARLKRAAAKVNAELGELDPQVADAIMRAADEVIAGKWPDEFPLSVWQTGSGTQSNMNMNEVLANRASELLGGERGEGRKVHPNDHVNRGQSSNDTFPTAMHVAAAVEVEHRVLPALKALRGTLAAKSAAFYDIVKIGRTHLQDATPLTLGQEISGYVAQLDLAEQQIRATLAGLHQLAIGGTAVGTGLNAHPQFSAKVSAELAHDTGSAFVSAPNKFQALASHEALLFAHGALKTLAAGLMKIANDVRWLASGPRSGLGEISIPENEPGSSIMPGKVNPTQCEAVTMLAAQVMGNDVAINVGGASGNFELNVFKPLVIHNFLQSVRLLADGMVSFDKHCAAGIEPNRERITELVERSLMLVTALNPHIGYDKAAQIAKKAHKENLSLKEAALALGHLTEAQFAEWVVPGDMTNARR
>CP025480.1|AZY44257.1|257792_258773_-|AEC-family-transporter
MSENSSLRRDAEAPLLSIFLPGSMSVALLVLPDFMLVALGWALRHKLGFSREFFAGTERMVYFVLFPALLFQSILRTPISAGHAMQLLQATAALMACGVALAWLAGPVLRPAPVALASAAQCGYRFNTYIGLALAASLAGGPGQTIMALIVGFAVPMANVAAVYGLARHSGNGLLRELARNPLLVSTLLSLACNLAGLSLPGPIDTVMARLGAAALALGIMCVGASLAWEGGKGHGRLIGWMLAVKLAAMPSAALGIAWALGLPALETRMLVLFSALPTASAAYVLAMRMGGDGRMVAVLISLGTLASAATIPLWLTAAAGLGAPN
>CP025480.1|AZY44258.1|258908_259892_+|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE
MNKVRTLVQAIAVATGLVAAAGAQAADAYPSKAIRVIVPFAPGGSTDIIARLVTQRMSQELGQPMVVENKGGAGGAIGASEAARAEPDGYTLSIATVSTMAVNPACRPKDLPYDPIKDFQPVTNFANTANVVAVNPKFPAKDFKGFLEELKKNPGKYSYGSSGTCGVLHLMGESFKMATGTDIVHVPYKGSGPAVADAVGGQIELIFDNLPSSMPQIQAGKLRAMAIAWPTRIDAIKDVPTFADAGFPVLNQPVWYGLLAPKGTPMDVVNKLRDAAVVALKDPKVIKALDDQGSAPSGNTPEEFAKEIKEQYDWAQDVVKKQNIKLD
>CP025480.1|AZY44259.1|259956_260856_-|LysR-family-transcriptional-regulator
MRLRHIEIFEAIRRTGSLTEAAAALHISQPAASKLLAHAEAQLGFKLFERVKGRLVATREAEILAPEVARLNQDLGSVRRLAASLRDRPHGHLRLGCAPALGLGLLPGVVRASRDAQPGITFDIHTHHSAELVQGLLAHELDLAITFDANNHPGLTRTSLGHTELVHLSRLPGAGTTRLQELGGETLIVLDARDASGSLLQMALDAQGLAPRVAIQVQTHYVACALAEAGCGDAVVDAITARAMLRPGMALRRLEPALRVPISVMTRSQDALSTLHHDFIERLRQACSVLQAQPAPQPE
>CP025480.1|AZY44260.1|260962_262717_+|gamma-glutamyltransferase
MPLRTLLAALCAAAICQAPAWAREAPGVAREDVNPEIASARSERAQAHAQRYMIATANPLASEAGYRILRAGGSATDAIIAAQLVLNLVEPQSSGIGGGAFMVHYDRGAGELRVYDSRETAPAAARPDRFLREGKPLSYAESVNNGRAVGTPGLLRGLELAHRQHGKLPWQALFEPAIAMAEQGFAVSPRLHESIAGDKALAAQPAAARYFYGPDGQAWPVGHRLRNPEFAATLRSIAREGADAFYRGPIARDIVAAVRAHPTPGDLAEADLAGYRAVVREPVCGLYRGYRLCGAPPPSSGPLAVLQMLGELEQYPLARMRPGSVEAVHYFSEAGRLAFADRDFYVADPAFVDVPVRALLDPAYLRQRGALIRPDRSMKTALPGDPQGLLAERARDDAIEVPSTSHLVAVDAAGNVVSMTSTIEAAFGSKIFVRGFLLNNEMTDFSSSYRDPEGRLVANRVEPGKRPRSSMAPMIVFRAGKPVLALGSPGGSAIINYVAKTLVGVLDWKLDVQQAIALPNLGSRNKETELERGTALEALAPALRRMGHEVRITDFPSGIQGIVIGPHGLAGGADPRREGLALGD

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Crispr_ID: CP025480_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025480_2

432034-432127

Orphan

Consensus_repeat	Method
GTGCCTGTCCCCGCCGGGACAGGCAC	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of CP025480_2

>merge|CP025480|2|432034-432127|CRISPRCasFinder
GTGCCTGTCCCCGCCGGGACAGGCACCCGGGCCCAGGAAAACCCCCACGCTGCGCCCGCTGTGCGGGCGTGCCTGTCCCCGCCGGGACAGGCAC

>CP025480|2|2|432034-432127|CRISPRCasFinder
GTGCCTGTCCCCGCCGGGACAGGCAC	CCGGGCCCAGGAAAACCCCCACGCTGCGCCCGCTGTGCGGGC
GTGCCTGTCCCCGCCGGGACAGGCAC

Protein	Signature genes	Signature genes Name	Protein_function
CP025480.1\|AZY44422.1\|439210_439996_+\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|181723
CP025480.1\|AZY44423.1\|440062_441034_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270234
CP025480.1\|AZY44411.1\|423523_425035_+\|TRAP-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270238
CP025480.1\|AZY44408.1\|420561_421056_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP025480.1\|AZY44409.1\|421148_422126_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025480.1\|AZY44417.1\|432772_433117_-\|TIGR01244-family-phosphatase	unknown	unknown	gnl\|CDD\|225984
CP025480.1\|AZY44413.1\|427143_427878_-\|DNA-polymerase-III-subunit-epsilon	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|235574
CP025480.1\|AZY44414.1\|430322_431273_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025480.1\|AZY44410.1\|422321_423527_+\|sodium/glutamate-symporter	unknown	unknown	gnl\|CDD\|129314
CP025480.1\|AZY44416.1\|432213_432684_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
CP025480.1\|AZY44407.1\|419373_420432_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133030
CP025480.1\|AZY44419.1\|436405_436924_-\|MgtC/SapB-family-protein	unknown	unknown	gnl\|CDD\|224204
CP025480.1\|AZY44420.1\|437034_437790_+\|TerC-family-protein	unknown	unknown	gnl\|CDD\|223930
CP025480.1\|AZY44418.1\|433216_434617_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
CP025480.1\|AZY44425.1\|442147_443320_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173841
CP025480.1\|AZY47456.1\|425050_426364_-\|short-chain-fatty-acids-transporter	unknown	unknown	gnl\|CDD\|224942
CP025480.1\|AZY44421.1\|437985_439218_+\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
CP025480.1\|AZY44424.1\|441044_442022_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176106
CP025480.1\|AZY44412.1\|426554_426734_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377342
CP025480.1\|AZY44415.1\|431404_431803_-\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|234569

Protein	Function_ID	Function_description	E-value
CP025480.1\|AZY44422.1\|439210_439996_+\|enoyl-CoA-hydratase	gnl\|CDD\|181723	PRK09245, PRK09245, crotonase/enoyl-CoA hydratase family protein.	5.15941e-155
CP025480.1\|AZY44423.1\|440062_441034_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270234	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) proteins present in a number of bacterial species, but mainly in proteobacteria. In eubacteria, at least three families of periplasmic binding-protein dependent transporters are known: the ATP-binding cassette (ABC) transporters, the tripartite ATP-independent periplasmic transporters, and the tripartite tricarboxylate transporters (TTT). Bug proteins are the PBP components of the TTT. Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	2.06741e-117
CP025480.1\|AZY44411.1\|423523_425035_+\|TRAP-transporter-substrate-binding-protein	gnl\|CDD\|270238	cd13520, PBP2_TAXI_TRAP, Substrate binding domain of TAXI proteins of the tripartite ATP-independent periplasmic transporters; the type 2 periplasmic binding protein fold. This group includes Thermus thermophilus GluBP (TtGluBP) of TAXI-TRAP family and closely related proteins. TRAP transporters are ubiquitous in prokaryotes, but absent from eukaryotes. They are comprised of an SBP (substrate-binding protein) of the DctP or TAXI families and two unequally sized integral membrane components. Although TtGluBP is predicted to be an L-glutamate and/or an L-glutamine-binding protein, the substrate spectrum of TAXI proteins remains to be defined. A sequence-homology search also shows that TtGluBP shares low sequence homology with putative immunogenic proteins of uncharacterized function. The substrate-binding domain of TAXI proteins belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and tworeceptor cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.13066e-82
CP025480.1\|AZY44408.1\|420561_421056_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.34959e-07
CP025480.1\|AZY44409.1\|421148_422126_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.0826e-23
CP025480.1\|AZY44417.1\|432772_433117_-\|TIGR01244-family-phosphatase	gnl\|CDD\|225984	COG3453, COG3453, Uncharacterized protein conserved in bacteria [Function unknown].	3.40043e-35
CP025480.1\|AZY44413.1\|427143_427878_-\|DNA-polymerase-III-subunit-epsilon	gnl\|CDD\|235574	PRK05711, PRK05711, DNA polymerase III subunit epsilon; Provisional.	2.40573e-142
CP025480.1\|AZY44414.1\|430322_431273_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.02206e-23
CP025480.1\|AZY44410.1\|422321_423527_+\|sodium/glutamate-symporter	gnl\|CDD\|129314	TIGR00210, Sodium/glutamate_symport_carrier_protein, sodium--glutamate symport carrier (gltS). [Transport and binding proteins, Amino acids, peptides and amines].	1.2444e-106
CP025480.1\|AZY44416.1\|432213_432684_-\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	9.38587e-30
CP025480.1\|AZY44407.1\|419373_420432_-\|glycosyltransferase	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	4.18053e-89
CP025480.1\|AZY44419.1\|436405_436924_-\|MgtC/SapB-family-protein	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	1.12064e-44
CP025480.1\|AZY44420.1\|437034_437790_+\|TerC-family-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	1.14565e-78
CP025480.1\|AZY44418.1\|433216_434617_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	3.43796e-109
CP025480.1\|AZY44425.1\|442147_443320_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173841	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26. Putative acyl-CoA dehydrogenases (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	4.27565e-82
CP025480.1\|AZY47456.1\|425050_426364_-\|short-chain-fatty-acids-transporter	gnl\|CDD\|224942	COG2031, AtoE, Short chain fatty acids transporter [Lipid metabolism].	6.57351e-166
CP025480.1\|AZY44421.1\|437985_439218_+\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	8.36236e-118
CP025480.1\|AZY44424.1\|441044_442022_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176106	cd08414, PBP2_LTTR_aromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of aromatic compounds and that of other related regulators, contains type 2 periplasmic binding fold. This CD includes the C-terminal substrate binding domain of LTTRs involved in degradation of aromatic compounds, such as CbnR, BenM, CatM, ClcR and TfdR, as well as that of other transcriptional regulators clustered together in phylogenetic trees, including XapR, HcaR, MprR, IlvR, BudR, AlsR, LysR, and OccR. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the substrate-binding domains from ionotropic glutamate receptors, LysR-like transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	2.33368e-60
CP025480.1\|AZY44412.1\|426554_426734_-\|hypothetical-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	0.00323203
CP025480.1\|AZY44415.1\|431404_431803_-\|GTP-binding-protein	gnl\|CDD\|234569	PRK00007, PRK00007, elongation factor G; Reviewed.	1.37761e-90

>CP025480.1|AZY44415.1|431404_431803_-|GTP-binding-protein
MTRRTSIERYRNIGISAHIDAGKATTTERILFYTGITHKLGEVHEGAATMDWMEQEQGRGITITSAATTAFWRGMAGNYPEHRINIIDTPGHVDFTIEVERSMRVLDGACMVYDSVGGVQEVATVMVVLPGQ
>CP025480.1|AZY44414.1|430322_431273_+|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDKYNLLTVHS
>CP025480.1|AZY44413.1|427143_427878_-|DNA-polymerase-III-subunit-epsilon
MRQIIFDTETTGLDPAQGHRIVEIGCVEIVNRMVTGNNLHLYLNPDRDSDPEALAVHGLTTEFLADKPRFAEVAEQFLAFIADAELIAHNAAFDVKFFNAELQRIGRDPLNTHCENIVDSLLHARSLHPGKRNSLDALCDRYGISNAHRTLHGALLDSQLLAEVWLAMTRGQDALLIDVDDQGANANGALVLGKFDASVLTVLAASEAELAEHAAYLQALDKAVGGACAWRAIEPLPAESGQPG
>CP025480.1|AZY44412.1|426554_426734_-|hypothetical-protein
MHPDTNTMLIIIAAAVALMIVGFGLRDRNLGLGLLGIGLIAALATIAYKAYITFNSFYY
>CP025480.1|AZY47456.1|425050_426364_-|short-chain-fatty-acids-transporter
MFKLMSRSAVKMVERYLPDPYVFVVLLTLVAAGAAMIIEGQTPMAVVRWWGNGFWGLLTFAMQMLLVLVTGYMLASTPLVKRMLARLASLATSAGGAIILVSVVSLAASWINWGFGLVVGALFAKQIARQVRVDYRLLVASAYSGFIIWHGGLAGSIPLTIATEGHFSADKIGIIPTGDTIFAVFNLVIVVAMFILVPLVNRLMLPDEKESVYVDPARLEEASVPASDDDKRPAARLENSRLLAWLIAAGGLAYMFDYYVVRGAGLNLNVINFSFLILAILLHGTPRRLLASLDEAIKGGAGIVIQFPFYAGIMAIMMDSGLAATLSEWFVSIASAATLPFWTFISAGIVNIFIPSGGGQWAVQSPIVISAAQALGADMPRVAMAVAWGDAWTNMLQPFWALPVLAIAGLKAKDIMGYCIIQLLVTGVIISVGLSFF
>CP025480.1|AZY44411.1|423523_425035_+|TRAP-transporter-substrate-binding-protein
MTMFIRWLILSACLLLAACSRAPDTEILQRDVGQTLAATYGPDLFDIVALRRMGSATDSTAPPGQTRRVVYYDVVLGLKKDLTLGAWDQPGAAALVSLLGAGPRSISGVKSSGNAAGDQIVAHASAIYQRDAEQWVHVAPASFTATEAPSLDTGAPPPVTRQLLQTLEQITRSVPYSASSTAQHVVQQELERSVARINGRLARLQKGYPLATGPDKGEYLAFGQALAAIGRNEQVRVIPLITGGSADNMAMLRSGAAVAALSQADIAQLAYEGKGPFESQGPFSGLRALGSLYPELVHIVVRQGDGIATVGALRGKKIALGPSGSAVRTTLETVLAAHGLQPGRDYAVIDTPAAAALPQLSEGRVDAVAQVIGTPAAPLRAALTQARLALLPLDRAAIDKLVQADPTLMALDIPANTYPSQAAAIPTVGMAALLVTTADLTRDEAAHMVDVVYRAGQDLLAAGSAQGAQVSAANAGRGLSIPLHDGAVEAFEKLGAPPLPEGR
>CP025480.1|AZY44410.1|422321_423527_+|sodium/glutamate-symporter
MISLTPVQSLLACCLVLVAGRILTTRIGVLSRYSIPDPIVGGLLFAVLATALDTWGGIQISLETNIKPTLLLIFFGCIGLTADLKLLARGGPRLIAFLLALIPFLVLQNAVGLGLAWLLDMHPLMGLIGGTITLVGGHGTGAAYAARFADINNIQDVMALAMTAATIGLVLGGIIGGPVAEWLIRRHKLDPRMAGKDANQVLPEVETTAEAPTATSFITSLTAVFVTVVVGTYLAGLVEDAPISLPNFLWCLATGAIIRNFGGYVGIRLDDRVSEIIGSISLSLFLGLTMMTLDLSSVVRLAGPLALMLVAQALVCALYAGWAVFRMLKRDYEAAVMAAAFCGFAMGATATAIANMQALTRRHGPAPESFIVVPVTGAFLVDILNVIVLTSLIALPFVGGM
>CP025480.1|AZY44409.1|421148_422126_+|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHSYMVRADLAG
>CP025480.1|AZY44408.1|420561_421056_+|GNAT-family-N-acetyltransferase
MPQSYIVRTMRPADVEAVLRVQAAVYPASLLESAALFQNRIEIAPATCQVALDGQDLIGYLIAYPWDAGLPPALDRSLERLPGAADTWFVHDCAVLPAAQGGGVAAALLAGGRAQARRLGLRRASLVALAQAVGYWLRHGYQPLADSDALRAKLAGYGDGARYM
>CP025480.1|AZY44407.1|419373_420432_-|glycosyltransferase
MFMYTEFRSQLLAGAGTSAAGQSARMAVLAGDGATGVQVSCVVPGLNEAANLRVLVPALRACLEQWCASWEIIVVDDGSTDDTAELMAQWSAVEGIRYVQLSRNFGKEAALTAGLEAADGDAVICLDADMQHPPELIGDMLAAWRNGADMVYAVRRQRDDEPWFKRVGARAFYRLLSTARGVEVPPHAGDFRLMDRRVVEALVALPERTRFMKGLYAWVGFKSQAVPYTPQARRHGASHFSAWKLFRLACDGLTAFTTWPLRLVSLIGVLFALLSLSYGGYLVADYLISGNAVSGWTTIVTALLFFAGINLISLGVVGEYVARIFDEVKGRPLFIARQRRGRAKRAAKARSQ
>CP025480.1|AZY44416.1|432213_432684_-|universal-stress-protein
MFKKILIPTDGSPLSAQAANAGICFARSTGAEVVALHVTQPFAATIGFDGMAAAYAITDEDYEKASAEQAEKYLKLILDRAETAGVKAESRAVSNFNVADGIVQAAGEAGCDLIFIGSHGRSGLSRLLLGSVTAKVLSLAHTAVLVYRVKEDKDKK
>CP025480.1|AZY44417.1|432772_433117_-|TIGR01244-family-phosphatase
MSAAIKPLTENFAVAPQLGPADMADVAAAGYKSVIINRPDFEGGPDQPTAADVSQAAQALGLQVEYQPVVGSAMTAADVARFAELLRTMPGPVLAYCRTGTRCTNLFAAAQQLG
>CP025480.1|AZY44418.1|433216_434617_-|PLP-dependent-aminotransferase-family-protein
MRQADATLVTQLADDLARRIDEHGLRPGTRLPSIRRMAEQSGVSRFTVVEAYDRLVARGLVQSRHGAGFFVRARSASLTALASARVPQAAPETPVRVDVSWLLRNMFRETAAGMPGGAGLLPPEWLDPDMVAAAVRAVGRTVRGNLVSYGSPQGYAPLRQQLASMLQADGVPAHPERNLLTTNGVTHGLDIVARHLIKPGDTVLVEDPAWFVIFGRLAAFGARPVGVPRGPDGPDLAMLDRLAAEHKPRLYIINGAVHNPIGHTLSAGAAYDILRLAERHDFMVVEDDTYADLHPGGAMKLAALDRLERVILVGGFSKMLAASLRVGYIAAGAETLQRLTDLKMLAGLTSPELGERVVHRVLVEGQYQRHIERVRARVNEARLRSIQALQQLGLSVPHEPHAGMFVWADCGRDSEPVARNAAERGMLLAPGTLFSPSGAPSTMLRFSVAMVDTPGIWQSIAAVMAQ
>CP025480.1|AZY44419.1|436405_436924_-|MgtC/SapB-family-protein
MDTVWMEIWTTVRNEFADIPDVAEATRIVLRLGMAVALGGLLGYERERSGKAAGLRTHMLVALGAALFVLVPLQGGMEVGDLSRVLQGVIAGIGFLGAGVIIKLGNEGEIRGLTTSAGIWLTAAIGVAAGMGREATALASTLIALFVLAALRRLEKRIAARDDKRVVAQPPP
>CP025480.1|AZY44420.1|437034_437790_+|TerC-family-protein
MDYLVSLAQQPAAWAALATLIAMEVVLGIDNLIFISILTNKLPPQHQTKARRIGIGMALILRLALLGTVAFIVQLTQPVFELFGHGFSWRDVILVAGGLFLVWKATKEIHHHVDPNPGDDMFGGKAATLGFAAAVAQILMLDLVFSIDSIITAVGMTEHIPIMFVAVIVAVAVMLLAAEPLARFIERNPTVVMLALAFLMMIGMTLIAEGFGAHVPKGYIYAAMAFSALVEGLNMMARRAREGRGAGAAGG
>CP025480.1|AZY44421.1|437985_439218_+|CoA-transferase
MSGPLEGVRILDVTTVLMGPYATQILGDLGADVIKVEPPAGDNVRGIGPGRHADMGGIFLHANRSKRSIALDLKNPAGREALLKVAATCDVLVYNVRPQAMARLGLSYAEVAQANPSILYVGMYGYDQRGPYAARAAYDDLIQGAVGIPSLSVEAGSDIPRYAPSAMVDRIVGISAANAVTAGLYHRARTGQGQAIDVPMFETMAHLILGDHMMGQTFEPPLGPPGYPRILNADRRPYATRNGHICVLLYADKHWKAFFELIGQPGRDAADPRFRDIGTRTQHIHAIYRLVSDAIASRTTEEWLAAFEAADIPAMPVHTMASLLRDPHLEAIGFFGMVDHPSEGAVRMMAVPSRWSGTPPQPRGHAPRLGEHSVDVLKEAGYDDEAIAALVRNGAAIAAARQLPEGTDHD
>CP025480.1|AZY44422.1|439210_439996_+|enoyl-CoA-hydratase
MTDFLRHERHGGVLLLTMDRERTRNALSDADAVEALVQACARIGADLSVRAVVLTGSHGVFSSGGNLKTLSDTVGAGLGEPVHSLQAYRSGIQRIPLALYNLEVPTIAAVNGPAIGAGCDLACMCDIRLAARQASFAESFVKLGLTPGDGGAWLLPRIVGMSRACELAFTGRSIDAARARELGLVSEVFDADALLPAALALAQEIAQHSGHALRLTKRLLREGQHTRLDTLLELSAGFQALAHHTQEHAGALDAHLSRKRG
>CP025480.1|AZY44423.1|440062_441034_+|tripartite-tricarboxylate-transporter-substrate-binding-protein
MHSRTLALALLSVAALAQGGSARAASDYPAHPVKIIVSLPPGSGADTTARFLSKHLAERFKQPFVVENRPGGNSFIAAQAVATAPPDGYTLFVASNSPMTTNAAVFKNLPYDAVKDFAPVAPIARFPMALVVPANSPYRSVADLVAAARAAPGQLNFASGTATYQVVLELFHEQNGIKATHVPYKGTSAALADVAGGVVQYSVADVSAALPLIRGGKLRPLAVTSTRRIKDLPDVPTMQESGNKGFEAYAWTAAFFPAKVDPAIVARVSDAVQALVRSQEGKAFMEQLGGEPFVGGPDTLAAFQRDELASMRRIAKLANIQQE
>CP025480.1|AZY44424.1|441044_442022_-|LysR-family-transcriptional-regulator
MWTGQYIVHIASPAHHWRRAVELRQLKQLLVLSETLNFHRAAERLHMAQPPLSTAIKKLEQELGVQLFERLPAGLQPTPAAEVVLRYARATLFYADEIQRAAQEGASGKQGMLKVGFVGSSIYSLMPQLLSAFRKDYPRVDLVIEESTTVDLLRRLDAHTLDVALVRFPVLEPSTARITLLQADHLMLAVPAGSRYAQRDDVALDELADEPFIGYSRTHVPGMHALIMYAFQQYGVVPHIAQEAIQVQTILSLVESGLGLAIVPKVACRQAGSGVRLVNVPQLAETIKVGIALAVHPDNATPTTANFVDMACRLMQTEPAAGQAR
>CP025480.1|AZY44425.1|442147_443320_+|acyl-CoA-dehydrogenase
MGAILGTIIEALQLAAIPAHDEALRPAVRAFLDEALREMPADRRARSWMGHDAEFSRALARQGWLGLTLPVEYGGAGRSNFARFVLSEELLAVGAPVSAHWVADRQTAPLILRFGSPAQRAFYLPRIIRGEAFFAIGMSEPDTGSDLASVRTRATPVADGWLLNGRKIWTTNAHRSHYMCALVRTSGAPEDRHRGLSQMIFDLALPGIEIRPIRDIAGDAHFCEVLFDNVLLPHDALVGEEGSGWRQVMAELALERSGPERIYSSMVLLDGWLAHLRCDAAPQRAQVCLAGRLAARLAVLRSMSLAVSQRLEQGADASLAAVLVKDLGTEFEQAVPELIGQALHASPQPAPDDVLMRTLAYLTLINPTFSLRGGTRHILRGIIARELGLR

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Crispr_ID: CP025480_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025480_3

996350-996444

Orphan

Consensus_repeat	Method
TAAAAGGGCACCCGCAAGGGTGTCCTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025480_3

>merge|CP025480|3|996350-996444|CRISPRCasFinder
TAAAAGGGCACCCGCAAGGGTGTCCTTTTATTGCGAAAAGATATCTGGAAGAAAGCCTTTTCAGAGTAAAAGGGCACCCGCAAGGGTGCCTTTTT

>CP025480|3|3|996350-996444|CRISPRCasFinder
TAAAAGGGCACCCGCAAGGGTGTCCTTTT	ATTGCGAAAAGATATCTGGAAGAAAGCCTTTTCAGAG
TAAAAGGGCACCCGCAAGGGTGCCTTTTT

Protein	Signature genes	Signature genes Name	Protein_function
CP025480.1\|AZY44900.1\|998369_999419_+\|NADP(H)-dependent-aldo-keto-reductase	unknown	unknown	gnl\|CDD\|381320
CP025480.1\|AZY44899.1\|997314_998265_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025480.1\|AZY44893.1\|985779_986814_+\|sulfate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224529
CP025480.1\|AZY44891.1\|983039_984866_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173842
CP025480.1\|AZY47484.1\|992908_994183_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|275263
CP025480.1\|AZY44904.1\|1005221_1008401_+\|multidrug-efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|273335
CP025480.1\|AZY44897.1\|995902_996283_+\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
CP025480.1\|AZY44901.1\|999556_1000573_-\|IS110-family-transposase-IS1663	unknown	unknown	gnl\|CDD\|376773
CP025480.1\|AZY44905.1\|1008397_1009780_+\|multidrug-transporter	unknown	unknown	gnl\|CDD\|273830
CP025480.1\|AZY47483.1\|990512_991421_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
CP025480.1\|AZY44890.1\|981866_982796_+\|electron-transfer-flavoprotein-subunit-alpha	unknown	unknown	gnl\|CDD\|224936
CP025480.1\|AZY47485.1\|1003496_1004414_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
CP025480.1\|AZY44896.1\|994724_995597_-\|multidrug-DMT-transporter-permease	unknown	unknown	gnl\|CDD\|274527
CP025480.1\|AZY44903.1\|1002713_1003445_+\|rRNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|224108
CP025480.1\|AZY44902.1\|1002081_1002654_-\|chorismate--pyruvate-lyase	unknown	unknown	gnl\|CDD\|225703
CP025480.1\|AZY44894.1\|988650_989715_+\|sulfate/thiosulfate-import-ATP-binding-protein-CysA	unknown	unknown	gnl\|CDD\|213263
CP025480.1\|AZY44895.1\|994336_994717_+\|hypothetical-protein	unknown	unknown	unknown
CP025480.1\|AZY44892.1\|984948_985590_+\|peroxiredoxin	unknown	unknown	gnl\|CDD\|239314
CP025480.1\|AZY44906.1\|1009849_1010101_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
CP025480.1\|AZY44898.1\|996493_997219_+\|CoA-pyrophosphatase	unknown	unknown	gnl\|CDD\|239518

Protein	Function_ID	Function_description	E-value
CP025480.1\|AZY44900.1\|998369_999419_+\|NADP(H)-dependent-aldo-keto-reductase	gnl\|CDD\|381320	cd19094, AKR_Tas-like, Escherichia coli Tas protein and similar proteins. Escherichia coli Tas protein is the prototype of this family. It is an NADP(H)-dependent aldo-keto reductase that catalyzes the reversible reduction of ketones to the respective alcohols using NADP(H) as a hydride donor.	0
CP025480.1\|AZY44901.1\|999556_1000573_-\|IS110-family-transposase-IS1663	gnl\|CDD\|376773	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS116, IS110 and IS902. This region is often found with pfam01548. The exact function of this region is uncertain. This family contains a HHH motif suggesting a DNA-binding function.	2.74666e-23
CP025480.1\|AZY44893.1\|985779_986814_+\|sulfate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224529	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism].	0
CP025480.1\|AZY44891.1\|983039_984866_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173842	cd01153, ACAD_fadE5, Putative acyl-CoA dehydrogenases similar to fadE5. Putative acyl-CoA dehydrogenase (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	6.94362e-153
CP025480.1\|AZY47484.1\|992908_994183_+\|radical-SAM-protein	gnl\|CDD\|275263	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B. Members of this family are the downstream member (B) of a pair of tandem-encoded radical SAM enzymes. Most of these radical SAM gene pairs have an additional upstream regulatory gene in the MarR family. Examples of high sequence identity (over 96 percent) from cassettes in several Treponema species of the oral cavity to those in multiple Firmicutes in the gut microbiome suggest recent lateral gene transfer, as might be expected for antibiotic resistance genes. The function is unknown.	4.71758e-24
CP025480.1\|AZY44904.1\|1005221_1008401_+\|multidrug-efflux-RND-transporter-permease-subunit	gnl\|CDD\|273335	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate].	0
CP025480.1\|AZY44897.1\|995902_996283_+\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	1.34063e-62
CP025480.1\|AZY44905.1\|1008397_1009780_+\|multidrug-transporter	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	9.9815e-102
CP025480.1\|AZY47483.1\|990512_991421_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP025480.1\|AZY44890.1\|981866_982796_+\|electron-transfer-flavoprotein-subunit-alpha	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	1.05379e-120
CP025480.1\|AZY47485.1\|1003496_1004414_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.56316e-67
CP025480.1\|AZY44896.1\|994724_995597_-\|multidrug-DMT-transporter-permease	gnl\|CDD\|274527	TIGR03340, phn_DUF6, phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.	3.74356e-26
CP025480.1\|AZY44903.1\|1002713_1003445_+\|rRNA-pseudouridine-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	7.73356e-72
CP025480.1\|AZY44902.1\|1002081_1002654_-\|chorismate--pyruvate-lyase	gnl\|CDD\|225703	COG3161, UbiC, 4-hydroxybenzoate synthetase (chorismate lyase) [Coenzyme metabolism].	1.05194e-17
CP025480.1\|AZY44894.1\|988650_989715_+\|sulfate/thiosulfate-import-ATP-binding-protein-CysA	gnl\|CDD\|213263	cd03296, ABC_CysA_sulfate_importer, ATP-binding cassette domain of the sulfate transporter. Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	3.07125e-165
CP025480.1\|AZY44899.1\|997314_998265_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.66858e-23
CP025480.1\|AZY44892.1\|984948_985590_+\|peroxiredoxin	gnl\|CDD\|239314	cd03016, PRX_1cys, Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes and lung. The seed-specific plant 1-cys PRXs protect tissues from reactive oxygen species during desiccation and are also called rehydrins.	3.35179e-132
CP025480.1\|AZY44906.1\|1009849_1010101_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	2.42408e-12
CP025480.1\|AZY44898.1\|996493_997219_+\|CoA-pyrophosphatase	gnl\|CDD\|239518	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes. The need of CoAses mainly arises under conditions of oxidative stress. CoAse has a conserved Nudix fold and requires a single divalent cation for catalysis. In addition to a signature Nudix motif G[X5]E[X7]REUXEEXGU, where U is Ile, Leu, or Val, CoAse contains an additional motif upstream called the NuCoA motif (LLTXT(SA)X3RX3GX3FPGG) which is postulated to be involved in CoA recognition. CoA plays a central role in lipid metabolism. It is involved in the initial steps of fatty acid sythesis in the cytosol, in the oxidation of fatty acids and the citric acid cycle in the mitochondria, and in the oxidation of long-chain fatty acids in peroxisomes. CoA has the important role of activating fatty acids for further modification into key biological signalling molecules.	5.50907e-72

>CP025480.1|AZY44897.1|995902_996283_+|50S-ribosomal-protein-L19
MNLIAILEQEEIARLTGGNAVTEFAPGDTVVVSVNVVEGTRKRVQAFEGVVIAKRNRGLNSSFIVRKISSGEAVERTFQLYSPQIAGIEVKRRGDVRRAKLYYLRSRSGKSARIKEKLVLKKAKSA
>CP025480.1|AZY44896.1|994724_995597_-|multidrug-DMT-transporter-permease
MSYTSLILVVLAAMAHAAWNLLAKRAAMVGPMFVFAYGLAATILYAPWVIWVLAHDGMVWSWPVVLCILASSMLHLGYSLCLQRGYQVADLSVVYPIARGTGPLLSTMGAFTLLSEPATTTGIAGMLCVVGGVLLIATQGRLGMFRQAQAWIGVRWGVVIGLFIAAYTVVDAYGVKILLIMPVLFDWFTCATRTLMMTPHVLRRRAQYWPAMRGYWHLAIAVGVLSPLGYILVLYALRNGAPLSLVAPAREMSMMLGTLAGMFLLREKVGIGRLAGCLAILAGVVLLGSS
>CP025480.1|AZY44895.1|994336_994717_+|hypothetical-protein
MTIATTLDAATSLPTAVPGRTLGALRRLARAWAGAAVPQRKWPFPPTPPGQAQPCTPCTDSQPRSVQAVQPAQARALHAQAELSGAATQAATQVLSTKAKIIDVLLVAVWGAMIPALMWLGAAGGF
>CP025480.1|AZY47484.1|992908_994183_+|radical-SAM-protein
MASTEHSFSAGFGSPAAAPAALRGRGAVTNVPHRFQQADRVRVDDGWANPDYTAGSDAAALPSVAEALGQGGRRAIPIAVEGADASPNTCAQAPAPRTIVQAEEARKMLSRNDSPDIPFDVAANPYRGCEHGCVYCYARPTHAYLGYSPGLDFETRLVAKANAVAALRAELARPGYRASPINIGSATDAYQPIERTWRLTRGMLELLLQTRHPLTVVTKNALVERDLDLLQDLARQKLVTVFVSITTLDAAMARTLEPRASAPYRRLQTVRTLAQAGVPVGVLVAPVIPFINDESLEHILQEASAAGACYASYTVLRLPWEVKEVFETWLQAHFPDRAQRVLHRIEDLRNGRRNDTAFGSRMRGTGIWADLLRQRFALATRKLDLNRHRPELDTHRFVPPLEPGLPPARGRREARAQPGQLALF
>CP025480.1|AZY47483.1|990512_991421_+|sulfate-adenylyltransferase-subunit-CysD
MSAVMTRSHLDWLESEAIFILREVAAECARPALLFSGGKDSVVLLRLAEKAFRPGRFPFPLLHIDTGHNYDEVISFRDARAAELGETLLVRSVEDSIARGSVALRRETDSRNAAQAVTLLEAIEELGLDACIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWNLFNTRVHRGENMWVFPISNWTELDVWQYIQRERLALPSIYYSHTREVVRRKGLLVPVTRLTPPAEGETVEQLAVRFRTVGDISCTCPVASDAADPAAIIAETAVTDITERGATRMDDQTSEASMERRKREGYF
>CP025480.1|AZY44894.1|988650_989715_+|sulfate/thiosulfate-import-ATP-binding-protein-CysA
MSIEVRGLSKRFGAFRALDEVSLHIETGELVALLGPSGCGKTTLLRIIAGLESADAGSVLFAGEDATEVDVRQRQVGFVFQHYALFKHMTVFENVAFGLRVRHRSQRPSEARIRAKVLDLLGLVQLDWLADRYPAQLSGGQRQRIALARALAVEPRVLLLDEPFGALDAKVRKELRRWLRRLHDELHVASVFVTHDQEEALEVTDRVVLMNAGRIEQVGSPREVWERPATPFVYGFLGDVNQLHGHATRGVWRLGEVALPAPDLPEADNQRAIAYVRPHDIDLARAGTAAPGIPVRLNHVYLAGPSAYLELARQDDQAIIEAQVPEPLFRSLGLKEGEALLAQPRRARVFAVQP
>CP025480.1|AZY44893.1|985779_986814_+|sulfate-ABC-transporter-substrate-binding-protein
MPRNTAGIRGAIVALATVFSLGLPWAVQAQDKQTLLNVSYDPTRELYRAVDEAFIKEYQARAGVDLTVRQSHGGSGRQARSVIDGLDADVVTLALAYDIDAIADRGLLPQDWQKRLPRNSSPYTSTIVFLVRKGNPRQIHDWDDLVKDGVQVITPNPKTSGGARWNYLAAWAYALARNEGSEAKAREFVGQLLSHVPVLDTGARGSTTTFVERGVGDVLLAWENEAFLAREELGPDKFDIVVPSLSILAEPPVAVVDKVVDRKGTRAAAQAYLEYLYTPAAQEIIARNFYRPTDAGVAAKYASRFPKLKLVTIDDPIFGGWRKAQKDHFSDGGTFDQVYQPQRK
>CP025480.1|AZY44892.1|984948_985590_+|peroxiredoxin
MGQLRLGDTAPDFEQKSSIGPLRLYDYLGDSWGVLFSHPADFTPVCTTELGYTAKLAGEFAKRNVKVLALSVDPVDSHTKWIDDINDTQSTTVNFPILADDDRKVSELYDMIHPNANATLTVRSVFVIDPAKKVRLTITYPASTGRNFDEILRVIDSLQLTDSHSVATPVNWKDGEDVIIVPSLKDEAVIKEKFPKGYKALRPYLRITPQPNK
>CP025480.1|AZY44891.1|983039_984866_+|acyl-CoA-dehydrogenase
MTYATPLQDFRFALNELAGLEEILKLPGFEEVTPDLVDAILEENARFVQQAIAPLNVAGDTKPPVWNDGQVTTTPGFSQGFADYTAGGWQGLQHPQKWGGQGLPKVVAAPAGENIQAASLAFSLCPMLTDGVIEALLTVGSEAQRQTYVPKLIGGQWTGTMNLTEPQAGSDLAQVATRAVRQDDGSYRLSGQKIFITYGEHDLAENIIHLVLARTPDAPAGVKGISLFIVPKYLVNEDGSRGKRNDVWCASLEHKLGIHGSPTAVLLYGAGKGEVGEGAVGYLVGEANRGLEYMFIMMNAARYSVGQQGIGVSERAYQHAQAYARERVQGRAIEGSAAPVTIAHHPDVQRMLLTMRALTEAARAVSYVAAAAHDKGTHHPDAEVRARNRAFYEYLVPIVKGFSTESAVEVASLGIQVHGGMGFIEETGAAQHYRDARILPIYEGTTAIQANDLVGRKTLRDGGATAHASIAAMRDTLKAVAAEAQRADTADHTALRVLRDNFDQAIQSYEGAVEFILAHAASNVRAVYSSSVPYLMLAGVVHGGWQMARAALACRRHLAAGSGDAFHRHKLGTALFYGAHILPRALALAAAVRAGDVADSCGSMADIA
>CP025480.1|AZY44890.1|981866_982796_+|electron-transfer-flavoprotein-subunit-alpha
MTTLVIAEHDNAQLKGATLNTIAAASRLGGEVHVLVAGSGAQAVAEQAAQAARVSKVLLADAPQLAEGLAENLAAQVLAVAGGYSHILFAATASGKNVAPRVAAKLDVAQISDIIGVESADTFQRPIYAGNAIATVQSGDAVKVITVRTTGFDAVAAQGGSAAVEALDAVADSGLSRFVGREVAKSDRPELAGARVVVSGGRGLGSAENFKILDPLADKLGAALGASRAAVDAGYAPNDWQVGQTGKIVAPQLYVAVGISGAIQHLAGMKDSKVIVAINKDPEAPIFGVADYGLVGDLFQVVPELTGAL
>CP025480.1|AZY44898.1|996493_997219_+|CoA-pyrophosphatase
MSDSAPSRPRRTPVRPLFDPMAQPWETANQGLARVDERLLTPPELRSSLRPADHWRLDPLCAAEPRAPGREGSLVAAAVLIPLVMRADGVRVMLTQRAAHLHDHAGQVSFPGGRIEVSDATPVAAALREAQEETGLPVQQVEVLGSMPQYFTATGFAITPVVSLVQPDFELAPDAFEVAEVFEVPLSFLMDPANHRLYRAALPDGYVRQYYAMPWQRYFIWGATAGMLRNLYQTVREALPG
>CP025480.1|AZY44899.1|997314_998265_-|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP025480.1|AZY44900.1|998369_999419_+|NADP(H)-dependent-aldo-keto-reductase
MKYRKLGHTDLDVSLIGLGTMTWGEQNTEAQAHEQLDYALAHGINLVDAAEMYPVPPKPETQGRTESCIGSWLARTGRRHEVVLASKAAGPVRDAKRPSHIRDGKTFLDRKNLTQALDASLKRLQTDYLDLYQLHWPDRTTNTFGKLAYPWVDDAHTVPIEETLEVLQDFVRAGKVRHVGLSNETPWGVARFLQAAEKHGLPKVATIQNPYNLLNRIFEIGLAEFSHREGVGLLAYSPLAMGILSGKYLDGARPEGSRLALFTRFTRYSNPQAEAAARDYVMLARDHGLAPAQMALAWVNQRPFVSSNLMGATTLAQLKENIESVEVTLSDEVLQGIEAIHARQPNPAP
>CP025480.1|AZY44901.1|999556_1000573_-|IS110-family-transposase-IS1663
MADSSLLSAGGQVHVFIGIDVSKAKLDCTLLTAEADKCKTKVVVNTAAGVQALLAWCAKHGAQPAQLHAILEPTGLYHEQAATALPQVRVSLVNPAQARDFAKALALRSKNDALDSYVLARYGQTLSPALWHPAPLHARQLRALLTRREALSKDLLRELNRKEKSQFSPSAPLVDGSIDKAIAFLREQIKQIERAIDQHIDNHPDLKQDCELLNSIPAIGPQAGNAILAVMHNRHIDSAQSLAAYLGVVPVQRQSGSSLNSCARLSKAGPSQVRATLYMAALVGTRHNPHIRALYQRLLKAGKSKKAALGAAMRKLVHLCFGVLKNRIPYQPNYAMNG
>CP025480.1|AZY44902.1|1002081_1002654_-|chorismate--pyruvate-lyase
MTTPIPLARGWLPAAPSTLDPLRKYWLFRPGALTAGLRQLGHVRLRVLAEYPTGAPRDEADGMRIAAQSPVWVREVLMSIDGVDSVVARSLTPLRASHGVWQGMRRLLTRPLADMLYHDPGIHRSVFVCRRLAAGVPFHATAIARAPAGGPEPALWARRSAFWRAGQPLLVAECFLPAFWSLARAPVAPR
>CP025480.1|AZY44903.1|1002713_1003445_+|rRNA-pseudouridine-synthase
MEKVRISKLMSERGLCSRREADSYIERGWVRVDGVVVSELGARALPDQVITLERAAAARQTARVTILLHKPVGYVSGQAEKGYTPAVALIDARSRYAGDRAPQRFERGQLQGLAVAGRLDIDSQGLLVLTQDGRIAKKLIGEDSEVDKEYLVRVQGRLSEAGLALLNHGLSLDGKPLRPAQVRWQNADQLRFVLREGKKRQIRRMCELVGLRVVGLKRVRIGRVSLGDLPAGQWRYLRADERF
>CP025480.1|AZY47485.1|1003496_1004414_-|LysR-family-transcriptional-regulator
MELFVEVARTLSFGRAAENLAIPKSTLSRQVAELERSVGLRLLSRTTRRVELTEAGQLYFERCQRIVAEARIAHEELQNLVETPSGPLRVNMPADFGTDFLSEAFTEFSRRYPEVTFYLDLASPEHAERVFQTCDVSIEIGDLPDSTHIARLLGVLPAHLYASPDYLARHGEPQHPDDLPRHECIQFRAGTGRVTRWPLNSGERHVEITPGNRFSVNSVSMVRNLATLGAGIAILAPMGNVREDIESGRLKRILPDWLAGPFPVYAVTDTRMLPAKTRIFVEFLMERLSNKTLAGQNNPAFLNLR
>CP025480.1|AZY44904.1|1005221_1008401_+|multidrug-efflux-RND-transporter-permease-subunit
MAKFFIDRPVFAWVIAIVLMMAGALSILSLPVAQYPNIAPPAISINVTYPGASAQTVQDTVVQVIEQQMNGIDNLQYISSESNSDGSMSITLTFSQGTNPDTAQVQVQNKLAVAQPLLPLEVQQQGIRVTKATKNFLIVAGFVSTDGTMDKSDLADYVASYIQDPISRTPGVGNFQLFGAPYAMRIWISPEKLVNFGLTASDVTTAIREQNVQVSSGQLGGQPAVRGQQLNATVIGPSRLQTPEAFGRILLKVNRDGSQVRLKDVASIELGAQTYAIDSYYNGKPASGLAIKLASGANALDTAQAVRETINGLKPYFPPGMDVVYPYDTTPFVSLSIEGVVKTLFEAVLLVFLVMYLFLQNVRATLIPTLAVPVVLLGTFGVLAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLSPRQATRKSMGQITGALIGIAMVLAAVFVPMAFFGGSTGVIYRQFSITIVSSMVLSVVVAIVFTPALCATMLKPIPKGHHGSKKGFFGWFNRTFERSSQAYANNVARSMGRTKRLLLIYVVILLGMAWMFMRIPTAFLPDEDQGILFAQVQAPAGATSERTQATIDAAVKYLLEDEKESVASVFAVNGFSFGGRGQNAAILFIKLRDWNERKGAEHRAAAVAARANAKFRAELRDAQAAVFAPPAVMELGNATGFDFQLQDRAGVGHEKLLAARNQLLQEAGASPMLVAVRPNGIEDAPQYQLDIDREKARALGVSITEINNTLATAWGSSYVNDFIDRGRVKKVFVQGEASSRMLPQDLDKWYVRNNAGDMVPFSAFSSAQWTFGPQKLNRYNGVPSYNIQGQAAPGYSSGDAMAEMERLADKLPLGIGYDWTGLSFEERLSGAQAPALYAISLIVVFLCLAALYESWSIPTAVMLVVPLGVVGALLATMTRGLSNDVYFQVGLLTTIGLAAKNAILIVEFAKEHYEEGASLTEAAVHAARQRLRPILMTSLAFILGVVPLAISTGAGSGSQNAIGTGVIGGMLTGTFLAIFFVPLFFVLTLRLFKVKRASENREDDDPHGGAQPATHGGQPQ
>CP025480.1|AZY44905.1|1008397_1009780_+|multidrug-transporter
MKPVVMRTLLSLAVATALAGCSLAPTYERPQAPVDAAYPSGPAYGAPGQAAAGAPAAADVGWRDFFGDPLLQELLALSLANNRDLRVAALNVEAARLNPSGQAGISRSYQVGASLSTWELDLFGRIRSLSEQALQLYLAQDETRLATQLTLVAETANAYLTLRADQELLALTRQTLAAQQESYKLTRQSYDLGVATELDLSQAEISLRTAERNLSQYTRMAAQDRNALVLLVGQPLPAGIGAQLDQAVALPDGVVLADLPAGLPSDLLARRPDIRAAEHQLQAANASIGAARAAFFPRISLTGSAGTASASLGGLFDAGSGAWSFAPQISVPIFAGGALRASLDLAKIQKDIGIARYEQAIQSGFREVSDALAGRGTLQEQIRSQELLVQANQRAYDLSQQRYQQGIDNYLSVLDSQRSLYTAQQTLVETRLARLSNLIQLYKALGGGWSERTVAAAQAG
>CP025480.1|AZY44906.1|1009849_1010101_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MNIIIMIIVGFVVGLITRAIMPGDQNMGYIMTTILGIIGSVVAGFLGQQLGWYAPGEPAGWIGSVVGAIIVLFVVGLVAKKRA

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Crispr_ID: CP025480_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025480_4

1891730-1891857

Orphan

Consensus_repeat	Method
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025480_4

>merge|CP025480|4|1891730-1891857|CRISPRCasFinder
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCGTGGGGGCACTACTTTGCCGCTGGGCCGCCCCAAGGCAAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCGTAGCGGGCGCAGCG

>CP025480|4|4|1891730-1891857|CRISPRCasFinder
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCG	TGGGGGCACTACTTTGCCGCTGGGCCGCCCCAAGGC
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCGTAGCGGGCGCAGCG

Protein	Signature genes	Signature genes Name	Protein_function
CP025480.1\|AZY45617.1\|1887164_1887806_+\|CoA-transferase-subunit-B	unknown	unknown	gnl\|CDD\|188219
CP025480.1\|AZY45616.1\|1886455_1887172_+\|3-oxoadipate-CoA-transferase	unknown	unknown	gnl\|CDD\|131482
CP025480.1\|AZY45628.1\|1899126_1899450_+\|iron-sulfur-cluster-assembly-protein-IscA	unknown	unknown	gnl\|CDD\|213674
CP025480.1\|AZY45618.1\|1887840_1888572_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270296
CP025480.1\|AZY45623.1\|1893939_1895976_+\|UvrABC-system-protein-B	unknown	unknown	gnl\|CDD\|235395
CP025480.1\|AZY45621.1\|1891880_1892609_-\|transcriptional-repressor-LexA	unknown	unknown	gnl\|CDD\|234688
CP025480.1\|AZY45615.1\|1883514_1884291_+\|3-oxoacyl-ACP-reductase	unknown	unknown	gnl\|CDD\|235546
CP025480.1\|AZY45629.1\|1899452_1899965_+\|co-chaperone-protein-HscB	unknown	unknown	gnl\|CDD\|235133
CP025480.1\|AZY45622.1\|1892659_1893862_-\|aspartate/tyrosine/aromatic-aminotransferase	unknown	unknown	gnl\|CDD\|181731
CP025480.1\|AZY45619.1\|1888589_1888802_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270296
CP025480.1\|AZY45627.1\|1898714_1899125_+\|Fe-S-cluster-assembly-scaffold-IscU	unknown	unknown	gnl\|CDD\|183087
CP025480.1\|AZY45630.1\|1900094_1901957_+\|chaperone-protein-HscA	unknown	unknown	gnl\|CDD\|235360
CP025480.1\|AZY45613.1\|1881907_1882339_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224462
CP025480.1\|AZY45624.1\|1896228_1896720_+\|low-molecular-weight-phosphotyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|319971
CP025480.1\|AZY45614.1\|1882335_1883493_+\|thiolase	unknown	unknown	gnl\|CDD\|180434
CP025480.1\|AZY45611.1\|1880638_1881094_+\|MaoC-family-dehydratase	unknown	unknown	gnl\|CDD\|239534
CP025480.1\|AZY45612.1\|1881107_1881911_+\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|223955
CP025480.1\|AZY45620.1\|1889372_1890323_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025480.1\|AZY45625.1\|1896935_1897448_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	unknown	unknown	gnl\|CDD\|273927
CP025480.1\|AZY45626.1\|1897465_1898677_+\|IscS-subfamily-cysteine-desulfurase	unknown	unknown	gnl\|CDD\|184450

Protein	Function_ID	Function_description	E-value
CP025480.1\|AZY45617.1\|1887164_1887806_+\|CoA-transferase-subunit-B	gnl\|CDD\|188219	TIGR02428, 3-oxoadipate_CoA-transferase_subunit_B, 3-oxoacid CoA-transferase, B subunit. Various members of this family are characterized as the B subunits of succinyl-CoA:3-ketoacid-CoA transferase (EC 2.8.3.5), beta-ketoadipate:succinyl-CoA transferase (EC 2.8.3.6), acetyl-CoA:acetoacetate CoA transferase (EC 2.8.3.8), and butyrate-acetoacetate CoA-transferase (EC 2.8.3.9). This represents a very distinct clade with strong sequence conservation within the larger family defined by pfam01144. The A subunit represents a different clade in pfam01144.	3.32577e-117
CP025480.1\|AZY45616.1\|1886455_1887172_+\|3-oxoadipate-CoA-transferase	gnl\|CDD\|131482	TIGR02429, 3-oxoadipate_CoA-transferase_subunit_A, 3-oxoacid CoA-transferase, A subunit. Various members of this family are characterized as the A subunits of succinyl-CoA:3-ketoacid-CoA transferase (EC 2.8.3.5), beta-ketoadipate:succinyl-CoA transferase (EC 2.8.3.6), acetyl-CoA:acetoacetate CoA transferase (EC 2.8.3.8), and butyrate-acetoacetate CoA-transferase (EC 2.8.3.9). This represents a very distinct clade with strong sequence conservation within the larger family defined by pfam01144. The B subunit represents a different clade in pfam01144, described by TIGR02428. The two are found in general as tandem genes and occasionally as a fusion.	2.11885e-141
CP025480.1\|AZY45628.1\|1899126_1899450_+\|iron-sulfur-cluster-assembly-protein-IscA	gnl\|CDD\|213674	TIGR02011, Protein_yfhF., iron-sulfur cluster assembly protein IscA. This model represents the IscA component of the ISC system for iron-sulfur cluster assembly. The ISC system consists of IscRASU, HscAB and an Isc-specific ferredoxin. IscA previously was believed to act as a scaffold and now is seen as an iron donor protein. This clade is limited to the proteobacteria. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	4.04388e-54
CP025480.1\|AZY45618.1\|1887840_1888572_+\|hypothetical-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	8.17828e-106
CP025480.1\|AZY45623.1\|1893939_1895976_+\|UvrABC-system-protein-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
CP025480.1\|AZY45621.1\|1891880_1892609_-\|transcriptional-repressor-LexA	gnl\|CDD\|234688	PRK00215, PRK00215, transcriptional repressor LexA.	1.30999e-106
CP025480.1\|AZY45615.1\|1883514_1884291_+\|3-oxoacyl-ACP-reductase	gnl\|CDD\|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	4.84544e-78
CP025480.1\|AZY45629.1\|1899452_1899965_+\|co-chaperone-protein-HscB	gnl\|CDD\|235133	PRK03578, hscB, Fe-S protein assembly co-chaperone HscB.	2.55481e-79
CP025480.1\|AZY45622.1\|1892659_1893862_-\|aspartate/tyrosine/aromatic-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
CP025480.1\|AZY45619.1\|1888589_1888802_+\|hypothetical-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	1.69368e-19
CP025480.1\|AZY45627.1\|1898714_1899125_+\|Fe-S-cluster-assembly-scaffold-IscU	gnl\|CDD\|183087	PRK11325, PRK11325, scaffold protein; Provisional.	5.84746e-99
CP025480.1\|AZY45630.1\|1900094_1901957_+\|chaperone-protein-HscA	gnl\|CDD\|235360	PRK05183, hscA, chaperone protein HscA; Provisional.	0
CP025480.1\|AZY45613.1\|1881907_1882339_+\|hypothetical-protein	gnl\|CDD\|224462	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only].	1.42164e-21
CP025480.1\|AZY45624.1\|1896228_1896720_+\|low-molecular-weight-phosphotyrosine-protein-phosphatase	gnl\|CDD\|319971	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase. Low molecular weight protein tyrosine phosphatases (LMW-PTP) are a family of small soluble single-domain enzymes that are characterized by a highly conserved active site motif (V/I)CXGNXCRS and share no sequence similarity with other types of protein tyrosine phosphatases (PTPs). LMW-PTPs play important roles in many biological processes and are widely distributed in prokaryotes and eukaryotes.	1.04407e-74
CP025480.1\|AZY45614.1\|1882335_1883493_+\|thiolase	gnl\|CDD\|180434	PRK06158, PRK06158, thiolase; Provisional.	0
CP025480.1\|AZY45611.1\|1880638_1881094_+\|MaoC-family-dehydratase	gnl\|CDD\|239534	cd03450, NodN, NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.	1.89129e-75
CP025480.1\|AZY45612.1\|1881107_1881911_+\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|223955	COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism].	1.56988e-63
CP025480.1\|AZY45620.1\|1889372_1890323_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.66858e-23
CP025480.1\|AZY45625.1\|1896935_1897448_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	gnl\|CDD\|273927	TIGR02010, Putative_HTH-type_transcriptional_regulator, iron-sulfur cluster assembly transcription factor IscR. This model describes IscR, an iron-sulfur binding transcription factor of the ISC iron-sulfur cluster assembly system. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Regulatory functions, DNA interactions].	1.00126e-77
CP025480.1\|AZY45626.1\|1897465_1898677_+\|IscS-subfamily-cysteine-desulfurase	gnl\|CDD\|184450	PRK14012, PRK14012, IscS subfamily cysteine desulfurase.	0

>CP025480.1|AZY45620.1|1889372_1890323_+|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP025480.1|AZY45619.1|1888589_1888802_+|hypothetical-protein
MGPAGIPADITAAWAKEIARVAALPDVSEKLATLGVESVSSTPQQFSAFVESEIRKWEKVVQDAHIPPVQ
>CP025480.1|AZY45618.1|1887840_1888572_+|hypothetical-protein
MKTKIKIVTLALCAFSSAVFASSFPSKPINLIVPYPPGGAVDPIALLYAEKISQSWGVPVIVLNRPGAGTTIGLNQAARAEPDGYTVVLGTASITSNAPLYRSLPYDTLKDFTYLSMAGMIPLAITANPRTAVNSMDELVGQLKKKPGSLTYSSSGNGTIIHLGGELFKSLAGVDMVHVPYKGSGPSVMAGVAGEVDLTFDSVFLMDPQVKAGKLKYIAVASEKRLKSLPEVPAIGESILVIS
>CP025480.1|AZY45617.1|1887164_1887806_+|CoA-transferase-subunit-B
MSKGWSNDEIAARIAVDLPEHAIVNLGIGLPILVANHIPEGKTIFFHSENGIIGLGPVPAPGQEDPDIVNAAKKHATLIAGASIVHHADSFSLIRGGRLDYSVLGGLQVSSGGDIANWKVPGQKGGGGVGGAMDLAVGARNVLVMMRHQDKTGASKLVKSCTFPLTAVSAVTRVYTELGIFECAGDAFIVRESAPGIGKDELLRKTEAALTFP
>CP025480.1|AZY45616.1|1886455_1887172_+|3-oxoadipate-CoA-transferase
MTAGTSTHFNQVNGVGMLNKTCESADEAVSVVESGATILISGFGDIGLPFELLHALARTSVKDLTIVSNNAGTGELGLSRLFRNRQVSRLIASFPSQPDSHHYFAAYQEGLVDLELVPQGTLAERIRAAGAGLAGFFTPTGYGTELAQGKECRMFKGKGYVFEEALPGDFAFIKAHVADAYGNFRYRRASRTFNPIMAMAARTTIAEAKQMVPVGSIDPDDVHTPGVFVDRIVEVRDE
>CP025480.1|AZY45615.1|1883514_1884291_+|3-oxoacyl-ACP-reductase
MQDKLLTLENRQVIVTGAGQGIGRALASAIAGLGGRVVAVDLNADALAALREALGHERCVTVAGNVADPSLAQQAVDAGVTAFGGVNGLVNNAGVTRTAMIDKMSISDWQQVIDVHLSGSFYFLQALGRHLLGRAKAGGDGAGAIVNISSDAGRRGTIGQINYGAAKAGVLGLTMCAAREWARYGIRTNTVGFGVVETPMTETIRGEKFRDTYLSQIPLGRWGEADEVVRPVCFLLSDADSYVTGQHLSVNGGYTIGL
>CP025480.1|AZY45614.1|1882335_1883493_+|thiolase
MIQERFPRGKTAIVACATYGIGESPGLSSLDLAVRASVQALDSVGLTPADVDGLFIGLPDDFVSGLSFTEYLGISPRLTDNNRTGGSSFLTHAIHAALALEAGLCDVALIAYGSNQRSGAGKLVSSMRPSPYEGAYKLARPVGAYALAASRYAAQYGLQKEQLGAVALAARQWAQKNPEAYMRAPLTMDECLASRLVCDPFSVRDCCLVTDGAAAVVMVRADRARDLAARPAYLLGGAAAAWHKDITNMPDLTVTAASLSGPRAMAQAGVTPADIDVLELYDAFTLNTILFLEDLGFCAKGEGGAFVEDGRIAPGGALPVNTNGGGLSCVHPGMYGLFTMVEAAQQLAGAAGERQVAQARLALAHGNGGELSSQATLILGTEETI
>CP025480.1|AZY45613.1|1881907_1882339_+|hypothetical-protein
MTEHPQAASALLPQQEYFAHLADGRFMIQRSRSSGEYVFYPRVAAPRTGAQDLEWVAASGRGTVYATTVMRVRPPAAPYNVCLVELEEGPRMMSRVEGIGPEDVQVGMAVRARIIRDDAGEPLVVFEPAGPSDAGIGQGRAAQ
>CP025480.1|AZY45612.1|1881107_1881911_+|enoyl-CoA-hydratase/isomerase-family-protein
MIMSVLEISRVGACAVLTLNRPAARNALDMDLRNALAKALPEIRDDATVRAVVLTGAGGHFCAGGDIRAIAAGQGNADVFEGRNRILSMQRWFDGLVDLEKPVIAAVDGVAFGAGLSLALAADFVLASPRATFCAVFARLGYVPDLGGMYLLPRAVGLARAKALAFSARVVGAPEALEMGIAHQLVDDRPVLDAALELAGRFEQAPAGALGIVKSVMNHAFESDRRTVYMQEALAQALCRESAFHQEAARRFLDKQAPLYQWPQEQQ
>CP025480.1|AZY45611.1|1880638_1881094_+|MaoC-family-dehydratase
MSFDSIAALKAFAGQPAAVGQPIVVDQSAIDTFGDVVHDRQWIHVDPVRAAAESPFGTTIAHGLLTLSLITGWYHQLFEFPGRKLALNYGFDKVRFPAPVPSGSALVGSFRLARVDELGPDEARCLWEVDVRVAGAERPAMVAEWLMQLRY
>CP025480.1|AZY45621.1|1891880_1892609_-|transcriptional-repressor-LexA
MRLAFFPWVLQNGAVYPYSPQKRVIAMATKLTERQQEILDLIRQTVARTGFPPTRAEIAQALGFRSPNAAEDHLKALARKGAIELTAGASRGIRLKVPDSATPSAQLTHPLLAQLVLPLVGRVAAGSPILASEHVEREVGVDPGLFAQTPDYLLKVRGMSMRDAGILEGDLLAVKRAAEARNGQIVVARLGDEVTVKRLQRQNGRIELLPENPDFAPIVVANTDEFALEGIAVGLIRTQPLH
>CP025480.1|AZY45622.1|1892659_1893862_-|aspartate/tyrosine/aromatic-aminotransferase
MSTLFASVELAPRDPILGLNEQYNADTRPGKVNLGVGVYYDDEGRIPLLQAVRKAEVARIEAAAARGYLPIEGIAGYNKGAQALLLGADSPLAAEGRVLTAQALGGTGALKIGADFLRQLLPQSKVLISDPSWENHRALFERAGFPVETYAYYDAATHGLNFEAMLAALQAAPEQTIVVLHACCHNPTGVDPTPQQWEQIAAVVKARNLVPFLDIAYQGFGEGLEQDAAVVRMFAELDLTMFISSSFSKSFSLYGERVGALTVVAGSKDEAARVLSQLKRVIRTNYSNPPTHGGTVVSTVLNTPELFALWENELAGMRDRIRLMRKELVEKIKTQGVAQDFSFVLAQRGMFSYSGLTAAQVDRLREEHGIYAVSSGRICVAALNSRNIDAVAAGIAAVLK
>CP025480.1|AZY45623.1|1893939_1895976_+|UvrABC-system-protein-B
MTAPGFVEFPDSPFHLYQPYPPAGDQPGAIDALTEGVSDGLMFQTLLGVTGSGKTYTMANMIARLGRPALVLAPNKTLAAQLYAEMREFFPRNAVEYFVSYYDYYQPEAYVPTRDLFIEKDSSINEHIEQMRLSATKSLLERRDTVIVGTVSCIYGIGNPGDYHAMVLILRTGDRISRREVLARLVAMQYTRNDADFTRGVFRVRCETIDIFPAESPELALRLTLFDDEIESLELFDPLTGRVRQKLPRFTVYPGSHYVTPRETVLRAIETIKEELRERLAQLIADGKLVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLIDYLPADALMFIDESHVTIGQLGGMYRGDRSRKETLVQYGFRLPSALDNRPLRLEEFEARMRQCVFVSATPAAYEQEHADNVVEQVVRPTGLVDPIVEVRPAHTQVDDLLGEIHKRAALQERVLVTTLTKRMAEDLTDFLSEHGVRVRYLHSDIDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGRAILYADRITDSMRRAIDETERRRAKQIQHNTDHGITARGVSKAVRELIDGVVAPAGHDALESAVPAEVLTDEKAMAREIRRLEKLMMDHARNLEFEQAAAARDALNALKSRLLLDGVGWSG
>CP025480.1|AZY45624.1|1896228_1896720_+|low-molecular-weight-phosphotyrosine-protein-phosphatase
MMTKVLFVCMGNICRSPSAEGVFRYLVNDAGMGDVVRVDSAGTHAFHIGEAPDARAQAAARKRGYDLTHCAARQVTADDFREFDLILAMDWDNLAALQQQCPKAYQHKLMLLMRFANEFEEATVPDPYYGGPEGFGKVLDYLEDACQGVLELVRKRATQYQAA
>CP025480.1|AZY45625.1|1896935_1897448_+|Fe-S-cluster-assembly-transcriptional-regulator-IscR
MRLTTKGRFAVTAMIDLAMRQHSGPVTLAAISQRQNISLSYLEQLFGKLRRHELVDSVRGPGGGYSLARLARNVTVADIIFAVDEPLDATSCGGKRDCTSGNDGKPGKCMTHELWTTLNRKMVDYLDSVSLQDLVDQQRVRQLQEAANQAQGCSAVRVNRSTPVAANATA
>CP025480.1|AZY45626.1|1897465_1898677_+|IscS-subfamily-cysteine-desulfurase
MSNRPIYLDYSATTPVDPSVVEKMIPWLYESFGNPASRSHAFGWEAEDAVEKAREEVAKLVNADPREIVWTSGATESDNLAIKGAANFYAERGKHIITVKTEHKAVLDTCRELERQGFEVTYLDVQDDGLLSLDAFKAALRPDTILVSVMMVNNEIGVIQDIAALGEICREKGIIFHVDAAQATGKVEIDLQKLKVDLMSFSAHKTYGPKGIGALYVRRKPRVRIEAQMHGGGHERGFRSGTLATHQIVGMGEAFRLAREEMGTENERVRMLRDRLLAGLTQIEEVYVNGSMEHRVPHNLNISFNYVEGESLIMAIKELAVSSGSACTSASLEPSYVLRALGRNDELAHSSIRFTLGRFTTEQEIDFTIELIKSRVGKLRDMSPLWEMAQEGIDLNSVQWAAH
>CP025480.1|AZY45627.1|1898714_1899125_+|Fe-S-cluster-assembly-scaffold-IscU
MAYSSKVLDHYENPRNVGSFDKGDDSVGTGMVGAPACGDVMKLQIKVNEAGVIEDARFKTYGCGSAIASSSLVTEWVKGKTLDEAMNIRNTQIAEELALPPVKIHCSILAEDAIKAAVQDYKTKHGAETPEAVAAN
>CP025480.1|AZY45628.1|1899126_1899450_+|iron-sulfur-cluster-assembly-protein-IscA
MAVTLTQSAANHVGRYLQKRGKGIGLRLGVRTTGCSGMAYKLEYVDEQAADDVVFDSFGVKVFIDPKSLAYLDGTELDYAREGLNEGFRFSNPNEKATCGCGESFTV
>CP025480.1|AZY45629.1|1899452_1899965_+|co-chaperone-protein-HscB
MAADDHFSLFGLPTRFALDPVQLEQAWRAVAARVHPDRYATASAAERRVAMQWAARANEAYRQLRDPMLRARYLCEQAGVDLQTESNTAMDPAFLMQQMEWREMLDDARRDPAAFAALRAELEQARLRMQQTLSELIDERGDYQQAGTKVREWMFVEKLAQELSAAQPMQ
>CP025480.1|AZY45630.1|1900094_1901957_+|chaperone-protein-HscA
MALLQISEPGDSPAPHQRKLAVGIDLGTTNSLVAAVRSSVPEVLADAQGQVLLPSAVRYLDGGAVRIGREALLEQARDPLNTIVSVKRFMGRSAADAAASGAPYEFVDAPGMVRLRTVQGDLSPVEVSAQILAVLRQRAEDVLGDDLVGAVITVPAYFDDAQRQATRDAARLAGLNVLRLLNEPTAAAIAYGLDQAAEGIYAVYDLGGGTFDISILRLTQGVFEVIATGGDTALGGDDFDSAIVAHACAGEDVAALPVADRRALLVAARAAREALTDQAQAPFEVTLRDGRAIQATLTRAQFEQLAEPLVGRTLDSARRALRDAGLAVGDVRGVVMVGGATRMPVVRQQVGALFGTEPLTNLDPDQVVALGAALQANLLAGNRALGEDWLLLDVIPLSLGLETMGGLVERIIPRNSTIPVARAQEFTTFKDGQTAMSVHVVQGERDLVSDCRSLARFELRGIPPMVAGAARIRVTFQVDADGLLSVTAREQSTGVEAAVAVKPSYGLSDDEIARMLADSVTQADSDARARMLREQQVEARQLVESVGAALAADGDLLDPAERATVDQRLQAAAQAQSLDDVEAVRAAVQALSDATEEFAARRMDRSIRSALAGRKLDELA

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Crispr_ID: CP025480_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025480_5

3428297-3428406

Orphan

Consensus_repeat	Method
TTGACTGCCAAGACGGTATCTGTCCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025480_5

>merge|CP025480|5|3428297-3428406|CRISPRCasFinder
TTGACTGCCAAGACGGTATCTGTCCCCGCAGGGAGGGTGCCTGTCCCCGCCGGGACAGGCACACTGCTGTACGCCATCGACGCTTGACGGCCAAGACGGTATCTGTCCCC

>CP025480|5|5|3428297-3428406|CRISPRCasFinder
TTGACTGCCAAGACGGTATCTGTCCCC	GCAGGGAGGGTGCCTGTCCCCGCCGGGACAGGCACACTGCTGTACGCCATCGACGC
TTGACGGCCAAGACGGTATCTGTCCCC

Protein	Signature genes	Signature genes Name	Protein_function
CP025480.1\|AZY46852.1\|3426258_3427044_+\|enoyl-[acyl-carrier-protein]-reductase-FabI	unknown	unknown	gnl\|CDD\|180789
CP025480.1\|AZY46850.1\|3423943_3424744_+\|hydroxyacylglutathione-hydrolase	unknown	unknown	gnl\|CDD\|274569
CP025480.1\|AZY46854.1\|3428407_3428800_-\|OsmC-family-peroxiredoxin	unknown	unknown	gnl\|CDD\|224679
CP025480.1\|AZY46858.1\|3433144_3433846_+\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|181883
CP025480.1\|AZY46860.1\|3436339_3437680_-\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587
CP025480.1\|AZY46843.1\|3413659_3414610_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025480.1\|AZY46855.1\|3428937_3429618_+\|DUF533-domain-containing-protein	unknown	unknown	gnl\|CDD\|377342
CP025480.1\|AZY46863.1\|3440661_3441477_+\|septum-site-determining-protein-MinD	unknown	unknown	gnl\|CDD\|225447
CP025480.1\|AZY46851.1\|3424754_3426164_+\|lytic-transglycosylase	unknown	unknown	gnl\|CDD\|182727
CP025480.1\|AZY46847.1\|3421695_3422646_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025480.1\|AZY46861.1\|3437795_3439559_+\|glutamine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235424
CP025480.1\|AZY46849.1\|3423152_3423923_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
CP025480.1\|AZY46844.1\|3414596_3414965_-\|hypothetical-protein	unknown	unknown	unknown
CP025480.1\|AZY46845.1\|3414963_3417942_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375438
CP025480.1\|AZY46859.1\|3433845_3435270_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|236531
CP025480.1\|AZY46862.1\|3439670_3440549_+\|septum-site-determining-protein-MinC	unknown	unknown	gnl\|CDD\|178806
CP025480.1\|AZY46856.1\|3429622_3430621_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
CP025480.1\|AZY46848.1\|3422642_3423110_-\|ribonuclease-HI	unknown	unknown	gnl\|CDD\|178927
CP025480.1\|AZY46846.1\|3418868_3419747_+\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|366126
CP025480.1\|AZY46857.1\|3430689_3431640_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234

Protein	Function_ID	Function_description	E-value
CP025480.1\|AZY46852.1\|3426258_3427044_+\|enoyl-[acyl-carrier-protein]-reductase-FabI	gnl\|CDD\|180789	PRK06997, PRK06997, enoyl-[acyl-carrier-protein] reductase FabI.	1.22848e-177
CP025480.1\|AZY46850.1\|3423943_3424744_+\|hydroxyacylglutathione-hydrolase	gnl\|CDD\|274569	TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753). [Cellular processes, Detoxification].	2.85848e-146
CP025480.1\|AZY46854.1\|3428407_3428800_-\|OsmC-family-peroxiredoxin	gnl\|CDD\|224679	COG1765, COG1765, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones].	4.86152e-16
CP025480.1\|AZY46858.1\|3433144_3433846_+\|DNA-binding-response-regulator	gnl\|CDD\|181883	PRK09468, ompR, osmolarity response regulator; Provisional.	4.05363e-90
CP025480.1\|AZY46860.1\|3436339_3437680_-\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	2.21087e-123
CP025480.1\|AZY46843.1\|3413659_3414610_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	5.27808e-22
CP025480.1\|AZY46855.1\|3428937_3429618_+\|DUF533-domain-containing-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	5.6465e-62
CP025480.1\|AZY46863.1\|3440661_3441477_+\|septum-site-determining-protein-MinD	gnl\|CDD\|225447	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning].	7.6448e-163
CP025480.1\|AZY46851.1\|3424754_3426164_+\|lytic-transglycosylase	gnl\|CDD\|182727	PRK10783, mltD, membrane-bound lytic murein transglycosylase D; Provisional.	5.28635e-76
CP025480.1\|AZY46847.1\|3421695_3422646_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	7.71464e-23
CP025480.1\|AZY46861.1\|3437795_3439559_+\|glutamine--tRNA-ligase	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
CP025480.1\|AZY46849.1\|3423152_3423923_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	9.0439e-10
CP025480.1\|AZY46845.1\|3414963_3417942_+\|hypothetical-protein	gnl\|CDD\|375438	pfam17936, Big_6, Bacterial Ig domain. This domain is found in a wide variety of extracellular bacterial proteins often in multiple tandem copies.	1.32844e-07
CP025480.1\|AZY46859.1\|3433845_3435270_+\|ATP-binding-protein	gnl\|CDD\|236531	PRK09467, envZ, osmolarity sensor protein; Provisional.	3.78414e-42
CP025480.1\|AZY46862.1\|3439670_3440549_+\|septum-site-determining-protein-MinC	gnl\|CDD\|178806	PRK00030, minC, septum site-determining protein MinC.	3.47756e-166
CP025480.1\|AZY46856.1\|3429622_3430621_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	7.76869e-129
CP025480.1\|AZY46848.1\|3422642_3423110_-\|ribonuclease-HI	gnl\|CDD\|178927	PRK00203, rnhA, ribonuclease H; Reviewed.	4.07937e-102
CP025480.1\|AZY46846.1\|3418868_3419747_+\|fatty-acid-desaturase	gnl\|CDD\|366126	pfam00487, FA_desaturase, Fatty acid desaturase.	2.20669e-12
CP025480.1\|AZY46857.1\|3430689_3431640_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	7.3142e-23

>CP025480.1|AZY46852.1|3426258_3427044_+|enoyl-[acyl-carrier-protein]-reductase-FabI
MGFLAGKRILMTGVLSNRSIAYGIARACRDQGADLAFTYVGDRFKERITEFAASFGSDIVLPCDVAEDSQIDAAFAELGKRWDGLDGLVHAIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPAMAKAALPLMEGRKGSVLTLSYLGSERVVANYNTMGLAKASLEASVRYLATALGPRGIRANAISAGPIKTLAASGIKDFSSILKFVEANAPLRRNVTIEDVGNVAAFMLSDLAAGITGEITHVDAGFSTVVPGMEN
>CP025480.1|AZY46851.1|3424754_3426164_+|lytic-transglycosylase
MRFLRLLLPLFLAVLAGCAGTAKQNQAAGPSSNRYIAQDTSRTVDLTSPPSDAWDRIRRGFAIPNLNTDLAQEWTDYYASHPESVQRMAERAGKYLYFIVDEINRRGLPTELALLPFVESAYNPTALSRSQASGLWQFIPTTGQHFNLKQDWWRDERRDPIASTYAALDYLEKLFEMQGDWYLALASYNWGEGSVQRAMAKNEAAGLSTDYLSLNMPDETRNYVPKLQAIKNIIANPRKFAVVLPPVENTPYFVAVQKNRDIDIELAARLAEMPLDEFKALNPAFNRPLIRGEHAPTLLLPADRADRFNANLQNYKGDLSSWKVYHTRRGESYAAIAKRFGISEAKLRASNDIGSKRKVAADQALLIPGVPSGDGAANIQLASLSPPVGALDNVGEPRAAAAPRGKAPARVASARPNVRTHKVSSGDTLFGLARKYGTSVGALRALNNLKGNNLKLGSQLRIPGTGTRG
>CP025480.1|AZY46850.1|3423943_3424744_+|hydroxyacylglutathione-hydrolase
MQTAPPLSAVVPLPAFSDNYIWALAHEGQAAVVDPGDAAPVLRWLRATGATLRAILLTHHHPDHVGGVLELVQATGATVYGPAGETLPHCDVRLAEGDRVTLPELALALEVLDVPGHTAGHIAYTGRAAGVERVLFCGDTLFAGGCGRLFEGTPAQMLDSLEKLSALPADTQVCCAHEYTLANLRWALAVEPANRTLQQWYQRAQELRNEGTPTLPSTIGQERETNPFLRTPHAAVAHAAAVWSGRSLATPVEVFAALRQWKNNFK
>CP025480.1|AZY46849.1|3423152_3423923_-|class-I-SAM-dependent-methyltransferase
MAEETPPIVELAEWFQTPPGQYVLAWEQAQFDEAVADIFGYYAWQVGLAEPNLLRANRMPFKAWVGAGVPPPELAQGWQACVAAAPEALPFESQSVDLLVLPHAFECAEAPHLVLREVERVLVPEGRVVISGFNPWSLWGARNLMPGMEAWLPLPLSAQVALPRLKDWFKLLSFEVERGRFGCYAPACRTDKWLRRWRFMERYGQRWWGLGGAVYVVTATKKVAAMRLIGPAWKTRRKRAQAASVVVNRQADDPGR
>CP025480.1|AZY46848.1|3422642_3423110_-|ribonuclease-HI
MQNLEGSGDGQQVEMWTDGACKGNPGPGGWGVLMRAGQHEKTMHGGERQTTNNRMELMAVIEGLRALKRPCRVTIHTDSQYVMKGMTEWLANWKRRGWRTADKKPVKNVELWQALDEQVGRHQVQWRWVRGHAGDPGNERADALANQGMEAARGR
>CP025480.1|AZY46847.1|3421695_3422646_+|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWQRPHQGIGRAVPISRLNLDEYNLLTVHT
>CP025480.1|AZY46846.1|3418868_3419747_+|fatty-acid-desaturase
MVRPAEWLRHRRDWQSVLYLAALPALAAWQWVHGWHWALYAPMLFLTLGVGVIHHNHAHRRMWRPRWLNRLTDFWLTLLQGHPTFVFHAAHNANHHRYKHGPRDVARTYRFGGDTNHLAGYLLHPLQAVVVLYPLFLASLRRLRSRRPGVWRYCLRQYAAWLGLWGGLLALDPGKAFWLVIVPQLHGLHWLLATNYLQHAHADGGPGRHAALSYARNFEGWVNPLLFNIGLHTAHHENPRAHWSELRALHWQHYRDRVPSRLNERGLAPYMARVFVLGLFSRRCRTHTLMRP
>CP025480.1|AZY46845.1|3414963_3417942_+|hypothetical-protein
MQLWLPDGTATSVRANAAGGFEASSAGDMTSGLIRARATDRYGDTSQEVTYAYTDTVDKTAPVLSIAGVATDEATGRVTVTGRSEPDAQVTIRFPGGGRKTVRADANGAYRVRSDGDLPAGVIVVQAADAAGNSTQAQQAYQDTVDRTAPEPVQIALDTDAATGRLTVSGQAEPGGSVTVTWPDGTTQTVRVDADGGFRVTSAGDAAQGDVVVVVADQAGNRAAPVRAHYADPVDRTAPMTPTVRHATDAQTGRVTVMGRTEAGALVTVQFPDGSSKTVRAQNDGGYAATSDTDMVSGPIVVSAGDADGNRTPAQQVMYTDTLDKTAPASPSLTVREDAASGRATVTGQAEPGAAVRVVFPNGEAQTVTAGSDGAYSVTSTADMVAGEITVVAADASGNQSAPARTVFADAVDKTAPAAPTLALSEAADSGRLTVSGRTEPGASVRVTFPDGETVTVTAKADGTYTATSRADMIGGNVTVVATDTAGNAAAPVRAAYADTVDRTPPVLDTPVLNVASDSGRVTVTGVTEPGARVQVAIPGESLQTVTADSAGRYRAVSPGDVLQSGTVRVIATDAHGNASAPRDVPYQDAVDRTAPPLTIEAAVEQARTGVVNVSGKTEPNLMVSATFPDGQTAQARADGQGRYQLASPADVARSGRIAVSASDAAGNRAAARAEFTDQVDKTAPAVTIRAVTEQAGTGVATVSGATEPGATVSVTFPDGQVARATADRSGAYTVHSARDVTARGNISVIATDAAGNASPSVSRQFSNTVADTVPPSLTIAMVTTDPGNGRITVSGVTEAGARVHVVFPGGASDTVTADSKGGYRATSAGDVGSGAVTAQATDASANRSPLKTYAYTDAWQPRQLSAKDFSQSRYFVPLTTRGGTDNEPLLRITTNQQIPTAELRVALKPYKTEDRAGRLVREAITLKWGNAPGVGGDARALHFYVPDSAKAKLRKELTEVERSNDYKFWIEFTDTRFGGVARLYIKVISTL
>CP025480.1|AZY46844.1|3414596_3414965_-|hypothetical-protein
MHVGQGLGDAVHGNAPGGRVGANLGNAQRQDDFLAPRIEHDAVLAPDEILQACAPVEWRGRVLRAAAQLPRQGLAQIQPHAQLDASCEDSIGCMHGSSEPDLRNWKSPPPQFTQGARPDEHP
>CP025480.1|AZY46843.1|3413659_3414610_-|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIPPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>CP025480.1|AZY46854.1|3428407_3428800_-|OsmC-family-peroxiredoxin
MTIQVRANTPGGLQYTATAEGHELPLAMPQPQGEGPDPHDYFDTALGGCKALTLMVYAQRKGLPLQAVDVDVVRDASEERKGIYRLTAKLKLHGDLDDAQIDELLKVADKCPLHKLMTATDIQVSTIVVE
>CP025480.1|AZY46855.1|3428937_3429618_+|DUF533-domain-containing-protein
MSARQLLDQLLQSGQSLMQGAGAQAQQATQGGKGTFLAGLGGGALGAGALGLLLGSKKARKIGGKVAMYGGMAALGALAYRAYDQYQRNQAGGAAAPAPQTLDRLPPAPAEQHSNAVLVAMIGAAKADGHIGPDERQLLETELAKLSGDAGDRAWLEAELARPLDPAVIAQQARTPEMGAEMYLASLLVADEQSFMERAYLDELARQLKLPAELKQQLEAQVPAAA
>CP025480.1|AZY46856.1|3429622_3430621_-|tripartite-tricarboxylate-transporter-substrate-binding-protein
MRPVAPMTTMKSQVSILLAGCLLGAGAAAAQAPATYPDHAITIVVTFPPGGGTDLLARKLGAAMQQRLGQPVVVENRPGASGNIGARAVAEARPDGYTLLMVNSSFAVNPGVFRNLDFSPTRDFTAVINVAYVPSVIVTAEPAGDAGLPERLRQADTQSRTLAFASCGNGTPQHLAGEMLRQASGAWLQHVPYRGCGPALTDVLSRQVPLGIVTASSAAPFIHAGKLRALAVTSAQRSPLLPDVPTVAEQGAPGYELDQWHGLLAPAGTPPAVIQRLYEALSAIVAEPAMRRELESLGFNPVSEGPERFEALVQADIARFAALTARMGLRAD
>CP025480.1|AZY46857.1|3430689_3431640_-|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWQRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP025480.1|AZY46858.1|3433144_3433846_+|DNA-binding-response-regulator
MDNPHTKLLVVDDDPALRQLLADYLNRHGYDTLLAPDASDLAARITRYAPDLLVLDRMLPGGDGADACRRLRDQGEDIPVILLTARDEAVDRIIGLEAGADDYLGKPFDPRELLARIEAVLRRKRGPSALTKDAPVSFGPFVFDPATRQLLRDDTPVKLTGGEINLLEALVRNAGKPLSRERLLALARDDDGGERNDRAIDIAILRLRRAIEEDPKQPRWIQTVWGIGYRFSP
>CP025480.1|AZY46859.1|3433845_3435270_+|ATP-binding-protein
MKLLRLPAPRSLRMRLILLVLGSVLLAQAATLATVSYFRHKFMEDVAIDYIATTIRTLRASLSQVPTDERAEFVRQASGNQWRLWSRSLPADARLQRWHRGPQEDEAERERMRREYERRHPPPDDIRRDLRGLVSELNERLSDGTRVALSRGPRPEIFISLAPSPSPDDAPPLREWLVIPLERLDPPVATPLIAFWVGGIGLVLLLAAWFSWHITRPLTRLADAADQLAAGQPQRVEPSGPHETRVLGERFNAMLDALAESDSVRRTLLSGLPHDLKGPLSRMWLRIEMADDPTLKEGLRKDLQDMQHMVDQFIGFVRGTDPAAYRYAPLALGEWLAERVGAWQGAGTDIRLQAPDNGALGIQADAVALGRLLDNLIGNALHHGAPPVEVSLRRDADMAVLEVSDHGPGIAPERRTEALRPFARLDDARTRTGNVGLGLALAEAIARAHGGGLELRQAPSGGLLVRITLPLAKA
>CP025480.1|AZY46860.1|3436339_3437680_-|cytochrome-ubiquinol-oxidase-subunit-I
MNIPPLLLARAQFTASLGFLALFLAISLALAWLLLFFKLRARWSGQSGWTAAYRFWVRIFALAFVLALACAVPVLIQLGSLWSGLMDKIGNLAGPLLGYGVLSIFIVKSCFLGVMLFGQRRVSDAAHTLAVLMVAIGQLVAVGWVLALFSWLQTPDGAVLIDGRYQVYDWRAVVLNPSFGWRLGLTVLGAFLTAGFLMLGVTAMQALRRPLDDGERHAFRAGLTVALLASLLLGPVAAGMGEVTARLQPAKAAAAAGFWHSGAEPELVVFGWPSARAQANLAAVSLAGAGGRWLHRDASLGYLGLDKFSGMQPPVAFTFWSLRLALGLGLLMLAASCATLALTCRRGFDPVALPRWWLRVLSLLMFAGALGVVATWCYDLAGMQPYAVNRAVTQSEVLGPVTTPALLYSLAGHIALYAVLLAAFVGMLFHAARYGVVPVRKTGGSS
>CP025480.1|AZY46861.1|3437795_3439559_+|glutamine--tRNA-ligase
MTHAPTPPAASNFLRPIIEDDLQANRFQGKLWAGKPGPAALQAQGQPDPARIRTRFPPEPNGYLHIGHAKSICVNFGLARDYGGVCHLRFDDTNPEKEEQEYVDAIIEAVHWLGFDWQADGNDNLYFASDYFEFMYEFAEALVQAGHAYVDEQSAEEIRASRGTLTEPGTDSPWRDRPADESLLRLREMRDGKHPDGSLVLRARIDMASPNINLRDPVMYRVRHATHHRTGNAWCIYPMYSWAHPVEDALEGITHSICTLEFEDQRPFYDWILARLAELGKLARPLPHQYEFARLNLTYVVTSKRKLLQLVREGYVDGWDDPRMPTLFGLRRRGYTPSSIRLFCDRTAVSKSDSRIDYSLLEQAVRDDLDPVAPRSVAVLDPLKLVITNYPEGRSETCSAPRNPHDPQAGVREFPFTRELWIEQDDFREEPPKKYFRLFPGNTVRLKYGYVVRCTGFTKDESGKVVEVQAEYLPDTKSGTPGADSVKVKGNITWVSAAHAVPAQVHLYDRLFADAHPDGGDKDFLACLNPNSKQTVQAWLEPGIEAVPGATWQFERLGYFTVDSKDSRPEAPVLNRIVTLRDSWQAA
>CP025480.1|AZY46862.1|3439670_3440549_+|septum-site-determining-protein-MinC
MNTESLALDFKSATLYAIRVVLHDADTTRLRAALDKRMADAGSFFENEPVVIDATRVDAPVDWPALLQALADHNLPPIGVVAEGANLQGARDAGLVPVELSTSVARAPQVIDTAPPNDVATPVPSVPEATAEATAKAGPQDDEADGEQADEAPAHNPESVPTRAARETTEANRPTATPPQSSSALVITKPLRSGQRVYARHTDLIVIGMVSQGAEVIADGNVHVYGPLRGKAMAGARGDTSARIFTTQLDAELLAVAGVYRVVEDKLDRALHNQPALVRLDGDTLRIEALKG
>CP025480.1|AZY46863.1|3440661_3441477_+|septum-site-determining-protein-MinD
MTRIVVVTSGKGGVGKTTTSASFSAGLAMRGHKTAVIDFDVGLRNLDLIMGCERRVVYDFVNVIQGEASLKQALIKDKQLENLFILPASQTRDKDALTQEGVEKVIDELKEMGFDYIVCDSPAGIEAGALMAAYFADDALVVTNPEVSSVRDSDRILGILAAKSRRAVQGDEPVKEYLLLTRYNPKRVNDGEMLSLSDIEDILRIKLIGVIPESEAVLQASNQGLPAIHLKDTDVSEAYKDVVARFLGEERSLRFTDYEKPGLLKRLFGGK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 122073

110

Planktothrix_phage(16.67%)

transposase,protease,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY44049.1\|0_1920_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
AZY44050.1\|1916_2609_+	ribosomal RNA small subunit methyltransferase G	NA	NA	NA	NA
AZY44051.1\|2605_3403_+	ParA family protein	Q8JL10	Natrialba_phage	5.6e-20	34.9
AZY44052.1\|3409_4171_+	N-acetyltransferase	NA	NA	NA	NA
AZY44053.1\|4214_5132_+	chromosome partitioning protein ParB	I3NLC2	Bifidobacterium_phage	1.9e-16	38.1
AZY44054.1\|6721_7912_+	elongation factor Tu	A0A1V0SLW6	Klosneuvirus	3.1e-14	29.2
AZY44055.1\|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA
AZY44056.1\|8540_9074_+	transcription termination/antitermination protein NusG	G3MAW2	Bacillus_virus	1.4e-11	30.5
AZY44057.1\|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA
AZY44058.1\|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA
AZY44059.1\|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA
AZY44060.1\|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA
AZY44061.1\|11661_15774_+	DNA-directed RNA polymerase subunit beta	A0A0N9R0J7	Chrysochromulina_ericina_virus	2.4e-21	28.8
AZY44062.1\|15773_20018_+	DNA-directed RNA polymerase subunit beta'	A0A2I7QNZ7	Vibrio_phage	3.5e-68	24.7
AZY47433.1\|20126_20531_-	lipoprotein	NA	NA	NA	NA
AZY44063.1\|20771_21947_+	hypothetical protein	NA	NA	NA	NA
AZY44064.1\|24352_25459_-	peptidoglycan-binding protein	NA	NA	NA	NA
AZY44065.1\|26470_27286_+	DNA-binding response regulator	NA	NA	NA	NA
AZY44066.1\|27282_28233_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44067.1\|28314_28650_-	CoA transferase	NA	NA	NA	NA
AZY44068.1\|28674_29109_-	hypothetical protein	NA	NA	NA	NA
AZY44069.1\|29141_30368_-	thiolase family protein	NA	NA	NA	NA
AZY44070.1\|30364_30862_-	dehydratase	NA	NA	NA	NA
AZY47434.1\|31069_31978_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY44071.1\|32163_33006_+	enoyl-CoA hydratase	NA	NA	NA	NA
AZY44072.1\|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA
AZY44073.1\|34625_35576_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44074.1\|35572_36763_-	MFS transporter	NA	NA	NA	NA
AZY44075.1\|36949_37924_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
AZY44076.1\|37925_40064_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
AZY44077.1\|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
AZY44078.1\|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AZY44079.1\|41318_42212_+	M48 family peptidase	NA	NA	NA	NA
AZY44080.1\|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA
AZY44081.1\|42687_43218_+	peptide deformylase	E3SLL2	Synechococcus_phage	3.7e-12	35.4
AZY44082.1\|43346_43646_-	DUF1974 domain-containing protein	NA	NA	NA	NA
AZY44083.1\|43663_44614_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44084.1\|45113_45749_+	hypothetical protein	NA	NA	NA	NA
AZY44085.1\|45720_45957_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AZY44086.1\|46084_46978_+	hypothetical protein	NA	NA	NA	NA
AZY44087.1\|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA
AZY44088.1\|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA
AZY44089.1\|50141_51092_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44090.1\|51134_52391_+	MFS transporter	NA	NA	NA	NA
AZY44091.1\|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA
AZY44092.1\|54362_54953_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.2e-20	33.6
AZY44093.1\|54977_55667_-	amino acid ABC transporter permease	NA	NA	NA	NA
AZY44094.1\|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA
AZY44095.1\|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY44096.1\|57497_58448_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44097.1\|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
AZY44098.1\|60474_60894_-	transcriptional regulator	NA	NA	NA	NA
AZY44099.1\|61077_62019_-	hypothetical protein	NA	NA	NA	NA
AZY47435.1\|62442_63279_-	hypothetical protein	NA	NA	NA	NA
AZY44100.1\|63473_64055_-\|protease	protease	NA	NA	NA	NA
AZY44101.1\|64067_64385_-	ferredoxin	NA	NA	NA	NA
AZY44102.1\|64488_65547_-	oxidoreductase	NA	NA	NA	NA
AZY44103.1\|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA
AZY44104.1\|67482_68664_-	hypothetical protein	NA	NA	NA	NA
AZY44105.1\|69085_70036_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44106.1\|70129_70444_+\|transposase	transposase	NA	NA	NA	NA
AZY44107.1\|71636_73544_+	molecular chaperone HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	1.1e-117	37.2
AZY44108.1\|73705_74326_-	glutathione S-transferase	NA	NA	NA	NA
AZY44109.1\|74357_74939_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	A0A1W6DX33	Sphingobium_phage	1.7e-05	54.3
AZY44110.1\|75027_75279_-	hypothetical protein	NA	NA	NA	NA
AZY47436.1\|75280_76030_-	hypothetical protein	NA	NA	NA	NA
AZY44111.1\|76228_77638_+	signal recognition particle protein	NA	NA	NA	NA
AZY44112.1\|77634_78585_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY47437.1\|78659_79604_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44113.1\|79600_81475_-	polysaccharide biosynthesis protein	A0A2P1ELS8	Moumouvirus	2.0e-23	26.9
AZY44114.1\|82822_83527_-	DUF2837 domain-containing protein	NA	NA	NA	NA
AZY44115.1\|83523_84630_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
AZY44116.1\|84891_85485_-	sugar transferase	NA	NA	NA	NA
AZY44117.1\|85481_86714_-	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	NA	NA	NA	NA
AZY44118.1\|86731_87991_-	glycosyltransferase WbuB	NA	NA	NA	NA
AZY44119.1\|88014_89103_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A0N9R0B2	Chrysochromulina_ericina_virus	4.8e-46	36.3
AZY44120.1\|89110_90211_-	aminotransferase DegT	A0A2K9L0G1	Tupanvirus	3.3e-31	29.7
AZY44121.1\|90214_90790_-	N-acetyltransferase	NA	NA	NA	NA
AZY44122.1\|90793_91846_-	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
AZY44123.1\|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA
AZY44124.1\|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA
AZY44125.1\|94288_94444_-	hypothetical protein	NA	NA	NA	NA
AZY44126.1\|94468_95272_-	type III pantothenate kinase	NA	NA	NA	NA
AZY44127.1\|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
AZY44128.1\|96203_97340_+	ABC transporter permease	NA	NA	NA	NA
AZY44129.1\|97339_98179_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.1e-21	32.4
AZY44130.1\|99111_99714_+	hypothetical protein	NA	NA	NA	NA
AZY44131.1\|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA
AZY44132.1\|100529_101786_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	6.2e-66	40.5
AZY44133.1\|101788_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA
AZY44134.1\|102808_103084_+	DUF493 domain-containing protein	NA	NA	NA	NA
AZY44135.1\|103091_103754_+	octanoyltransferase	NA	NA	NA	NA
AZY44136.1\|103815_104817_+	lipoyl synthase	NA	NA	NA	NA
AZY44137.1\|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	3.7e-47	53.4
AZY44138.1\|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
AZY44139.1\|106330_107392_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.6e-78	44.8
AZY44140.1\|107427_108378_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44141.1\|109277_110471_+	cystathionine beta-lyase	NA	NA	NA	NA
AZY44142.1\|110552_111182_-	thiol:disulfide interchange protein DsbA	NA	NA	NA	NA
AZY44143.1\|111243_111927_-	SPOR domain-containing protein	NA	NA	NA	NA
AZY44144.1\|111936_113619_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
AZY47438.1\|113906_114254_+	DUF1840 domain-containing protein	NA	NA	NA	NA
AZY44145.1\|114344_114662_+	hypothetical protein	NA	NA	NA	NA
AZY44146.1\|114944_115961_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY44147.1\|116036_116837_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
AZY44148.1\|116833_117709_-	sugar ABC transporter permease	NA	NA	NA	NA
AZY44149.1\|117719_119012_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY44150.1\|119054_120095_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.0e-22	33.7
AZY44151.1\|120200_121022_-	phosphodiesterase	NA	NA	NA	NA
AZY44152.1\|121122_122073_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

164893 : 225404

Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)

transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY44184.1\|164893_165844_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44185.1\|167287_168190_-	hypothetical protein	NA	NA	NA	NA
AZY44186.1\|168167_168797_-	LemA family protein	NA	NA	NA	NA
AZY47443.1\|169127_170510_+	RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.3e-42	29.5
AZY44187.1\|170543_171173_+	threonine transporter RhtB	NA	NA	NA	NA
AZY44188.1\|171221_172829_+	peptide chain release factor 3	A0A2K9L6L3	Tupanvirus	9.3e-14	37.8
AZY44189.1\|172853_173537_+	hypothetical protein	NA	NA	NA	NA
AZY47444.1\|173618_174095_-	bacterioferritin	NA	NA	NA	NA
AZY44190.1\|174301_175252_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44191.1\|176367_176895_+	lipoprotein	NA	NA	NA	NA
AZY44192.1\|176986_177802_+	lipoprotein	NA	NA	NA	NA
AZY44193.1\|177862_178597_+	sulfurtransferase	NA	NA	NA	NA
AZY44194.1\|178634_180713_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.5e-27	23.6
AZY44195.1\|180962_181235_-	hypothetical protein	NA	NA	NA	NA
AZY44196.1\|181333_182422_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
AZY44197.1\|182425_184330_+	outer membrane protein assembly factor	NA	NA	NA	NA
AZY44198.1\|184326_188001_+	DUF490 domain-containing protein	NA	NA	NA	NA
AZY44199.1\|188061_188625_+	dCTP deaminase	S5VM63	Pseudomonas_phage	2.6e-72	75.3
AZY44200.1\|188632_189055_-	glyoxalase	NA	NA	NA	NA
AZY44201.1\|189082_189502_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA
AZY47445.1\|189530_189977_-	N-acetyltransferase	Q9AZG4	Lactococcus_phage	1.2e-08	29.4
AZY44202.1\|190103_190601_+	hypothetical protein	NA	NA	NA	NA
AZY44203.1\|190755_193026_+	lysine decarboxylase	NA	NA	NA	NA
AZY44204.1\|193074_194307_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
AZY44205.1\|194405_195356_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44206.1\|195401_196094_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	2.4e-83	73.8
AZY44207.1\|196090_196984_+	ZIP family metal transporter	NA	NA	NA	NA
AZY44208.1\|197378_198479_+	aminomethyltransferase	NA	NA	NA	NA
AZY44209.1\|198560_198935_+	glycine cleavage system protein H	NA	NA	NA	NA
AZY44210.1\|198994_201859_+	glycine dehydrogenase	E3SN07	Prochlorococcus_phage	1.2e-261	51.4
AZY44211.1\|202003_202744_-	FadR family transcriptional regulator	NA	NA	NA	NA
AZY44212.1\|202813_204025_+	CoA transferase	NA	NA	NA	NA
AZY44213.1\|204053_205022_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY44214.1\|205635_206586_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44215.1\|206742_207066_+	PsiF repeat family protein	NA	NA	NA	NA
AZY44216.1\|207170_208220_-	cyclase	NA	NA	NA	NA
AZY44217.1\|208216_209041_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA
AZY44218.1\|209041_209338_-	YciI family protein	NA	NA	NA	NA
AZY44219.1\|209363_209639_-	muconolactone delta-isomerase	NA	NA	NA	NA
AZY44220.1\|209695_210340_-	CoA transferase subunit B	NA	NA	NA	NA
AZY44221.1\|210339_211026_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA
AZY47446.1\|211155_212007_+	IclR family transcriptional regulator	NA	NA	NA	NA
AZY44222.1\|212057_212783_-	short-chain dehydrogenase	NA	NA	NA	NA
AZY44223.1\|212814_214164_-	short-chain fatty acid transporter	NA	NA	NA	NA
AZY44224.1\|214275_215208_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA
AZY44225.1\|215665_218461_-\|protease	serine protease autotransporter SphB1	NA	NA	NA	NA
AZY44226.1\|219054_221997_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
AZY44227.1\|222068_222788_+	7-cyano-7-deazaguanine synthase QueC	A0A0A0RPC6	Escherichia_phage	8.0e-50	43.9
AZY44228.1\|222826_223375_-	N-acetyltransferase	A0A2H4J136	uncultured_Caudovirales_phage	1.2e-21	41.7
AZY44229.1\|223529_224429_+	virginiamycin B lyase	NA	NA	NA	NA
AZY44230.1\|224453_225404_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

233336 : 286924

Bacillus_phage(25.0%)

transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY44238.1\|233336_234287_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44239.1\|234373_235324_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44240.1\|235320_236271_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44241.1\|236369_237167_-	beta-D-hydroxybutyrate dehydrogenase	NA	NA	NA	NA
AZY44242.1\|238116_238527_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA
AZY44243.1\|239548_240292_-	GntR family transcriptional regulator	NA	NA	NA	NA
AZY44244.1\|240335_241379_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY44245.1\|241549_243652_+	hypothetical protein	NA	NA	NA	NA
AZY44246.1\|245062_246019_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY44247.1\|246037_246529_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
AZY44248.1\|246525_247881_-	polynucleotide adenylyltransferase PcnB	A0A1B1IVF3	uncultured_Mediterranean_phage	3.4e-25	36.8
AZY44249.1\|247881_248580_-	HAD-IB family hydrolase	NA	NA	NA	NA
AZY44250.1\|248576_249278_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA
AZY44251.1\|249530_250580_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	5.6e-68	43.6
AZY44252.1\|250685_251627_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
AZY44253.1\|251623_253513_-	DNA mismatch repair protein MutL	A0A1B2LRQ5	Wolbachia_phage	3.3e-79	32.8
AZY44254.1\|253599_254238_+	hypothetical protein	NA	NA	NA	NA
AZY47447.1\|254380_255625_-	N-acetylmuramoyl-L-alanine amidase	A0A2H4JCM7	uncultured_Caudovirales_phage	4.1e-17	30.3
AZY44255.1\|255696_256233_-\|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
AZY44256.1\|256384_257776_+	class II fumarate hydratase	NA	NA	NA	NA
AZY44257.1\|257792_258773_-	AEC family transporter	NA	NA	NA	NA
AZY44258.1\|258908_259892_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA
AZY44259.1\|259956_260856_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY44260.1\|260962_262717_+	gamma-glutamyltransferase	NA	NA	NA	NA
AZY44261.1\|262724_263849_-	CoA transferase	NA	NA	NA	NA
AZY44262.1\|263862_264843_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY44263.1\|265573_266524_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44264.1\|267083_267629_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA
AZY44265.1\|267712_269332_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA
AZY44266.1\|269347_270502_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
AZY44267.1\|270515_270641_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA
AZY44268.1\|270637_272389_+	thiol reductant ABC exporter subunit CydD	W8CYL7	Bacillus_phage	3.4e-09	23.8
AZY44269.1\|272385_274065_+	thiol reductant ABC exporter subunit CydC	W8CYL7	Bacillus_phage	3.6e-16	27.6
AZY44270.1\|274100_274676_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.4e-28	43.1
AZY44271.1\|275818_276097_+	DUF4148 domain-containing protein	NA	NA	NA	NA
AZY44272.1\|277140_278091_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44273.1\|278077_278293_-	hypothetical protein	NA	NA	NA	NA
AZY44274.1\|278368_278530_+	DUF4224 domain-containing protein	NA	NA	NA	NA
AZY44275.1\|278537_278678_+	hypothetical protein	NA	NA	NA	NA
AZY44276.1\|279196_279646_-\|protease	ClpXP protease specificity-enhancing factor	NA	NA	NA	NA
AZY44277.1\|279655_280267_-	glutathione S-transferase	NA	NA	NA	NA
AZY44278.1\|280425_281280_-	cytochrome c1	NA	NA	NA	NA
AZY44279.1\|281299_282682_-	cytochrome b	NA	NA	NA	NA
AZY44280.1\|282746_283388_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA
AZY44281.1\|283527_283986_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
AZY44282.1\|284010_284787_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
AZY44283.1\|284840_285977_+	PDZ domain-containing protein	W5SAB9	Pithovirus	1.2e-07	31.2
AZY44284.1\|285973_286924_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

390857 : 448366

Orpheovirus(14.29%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY44383.1\|390857_391808_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44384.1\|391944_392862_+	reductase	NA	NA	NA	NA
AZY44385.1\|392858_393107_+	glutaredoxin family protein	NA	NA	NA	NA
AZY44386.1\|393103_394309_+	CoA transferase	NA	NA	NA	NA
AZY44387.1\|394381_395377_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY44388.1\|395399_396620_-	CoA transferase	NA	NA	NA	NA
AZY44389.1\|396616_397261_-	hypothetical protein	NA	NA	NA	NA
AZY44390.1\|398991_399801_-	IclR family transcriptional regulator	NA	NA	NA	NA
AZY47453.1\|400018_401059_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	6.1e-59	42.5
AZY44391.1\|401157_402141_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44392.1\|402067_402769_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY44393.1\|402817_403588_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AZY44394.1\|403584_404826_-	CoA transferase	NA	NA	NA	NA
AZY44395.1\|404930_406637_-	thiamine pyrophosphate-binding protein	NA	NA	NA	NA
AZY44396.1\|406633_407530_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY44397.1\|407570_409160_-	sulfurtransferase	NA	NA	NA	NA
AZY44398.1\|409209_410202_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY44399.1\|410270_410870_-	hypothetical protein	NA	NA	NA	NA
AZY47454.1\|411330_412308_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY44400.1\|412386_413337_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44401.1\|413425_414340_+	EamA/RhaT family transporter	NA	NA	NA	NA
AZY44402.1\|414336_414996_+	LysE family translocator	NA	NA	NA	NA
AZY44403.1\|415085_416009_+	alpha/beta hydrolase	A0A1C9C5K3	Heterosigma_akashiwo_virus	4.8e-07	27.2
AZY44404.1\|416014_416470_-	hypothetical protein	NA	NA	NA	NA
AZY44405.1\|416466_417570_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA
AZY47455.1\|417489_417798_+	GtrA family protein	NA	NA	NA	NA
AZY44406.1\|417757_419377_-	phospholipid carrier-dependent glycosyltransferase	NA	NA	NA	NA
AZY44407.1\|419373_420432_-	glycosyltransferase	I1TED8	Salmonella_phage	2.8e-59	40.5
AZY44408.1\|420561_421056_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AZY44409.1\|421148_422126_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44410.1\|422321_423527_+	sodium/glutamate symporter	NA	NA	NA	NA
AZY44411.1\|423523_425035_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA
AZY47456.1\|425050_426364_-	short-chain fatty acids transporter	NA	NA	NA	NA
AZY44412.1\|426554_426734_-	hypothetical protein	NA	NA	NA	NA
AZY44413.1\|427143_427878_-	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	1.4e-41	43.8
AZY44414.1\|430322_431273_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44415.1\|431404_431803_-	GTP-binding protein	E4ZFJ7	Streptococcus_phage	9.0e-19	44.3
AZY44416.1\|432213_432684_-	universal stress protein	NA	NA	NA	NA
AZY44417.1\|432772_433117_-	TIGR01244 family phosphatase	NA	NA	NA	NA
AZY44418.1\|433216_434617_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
AZY44419.1\|436405_436924_-	MgtC/SapB family protein	G3MA03	Bacillus_virus	2.1e-12	38.9
AZY44420.1\|437034_437790_+	TerC family protein	A0A0R6PEZ3	Moraxella_phage	2.9e-42	40.8
AZY44421.1\|437985_439218_+	CoA transferase	NA	NA	NA	NA
AZY44422.1\|439210_439996_+	enoyl-CoA hydratase	NA	NA	NA	NA
AZY44423.1\|440062_441034_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY44424.1\|441044_442022_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY44425.1\|442147_443320_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AZY44426.1\|443346_444375_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AZY44427.1\|444440_445634_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA
AZY44428.1\|447415_448366_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

620800 : 721264

111

uncultured_Caudovirales_phage(13.79%)

transposase,tRNA,tail,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY44578.1\|620800_621751_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44579.1\|622449_622833_+	hypothetical protein	NA	NA	NA	NA
AZY44580.1\|622890_623493_+	DUF2946 domain-containing protein	NA	NA	NA	NA
AZY47464.1\|623510_623912_-	DoxX family protein	NA	NA	NA	NA
AZY47465.1\|624045_624939_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY44581.1\|624935_625517_+	NUDIX hydrolase	NA	NA	NA	NA
AZY44582.1\|626311_627046_+	arginyltransferase	NA	NA	NA	NA
AZY44583.1\|627086_628136_+	dihydroorotate dehydrogenase (quinone)	NA	NA	NA	NA
AZY44584.1\|628283_628862_-	Phasin (PHA-granule associated protein)	NA	NA	NA	NA
AZY44585.1\|629248_630226_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA
AZY44586.1\|630319_634714_-	dermonecrotic toxin	NA	NA	NA	NA
AZY44587.1\|634914_635763_-	IclR family transcriptional regulator	NA	NA	NA	NA
AZY44588.1\|635921_636734_-	competence/damage-inducible protein A	NA	NA	NA	NA
AZY44589.1\|636789_637740_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44590.1\|637838_638639_-	hypothetical protein	NA	NA	NA	NA
AZY44591.1\|638700_639084_+	thioredoxin	NA	NA	NA	NA
AZY44592.1\|639095_640529_-	ATP-dependent helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.5e-52	34.4
AZY44593.1\|640735_641065_-	AzlD domain-containing protein	NA	NA	NA	NA
AZY47466.1\|641067_641736_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY44594.1\|641999_642920_+	branched-chain amino acid transaminase	NA	NA	NA	NA
AZY44595.1\|642966_643179_+	zinc-finger domain-containing protein	NA	NA	NA	NA
AZY44596.1\|643201_643624_+	DUF4440 domain-containing protein	NA	NA	NA	NA
AZY44597.1\|643640_644741_+	alpha/beta hydrolase	NA	NA	NA	NA
AZY44598.1\|644837_646355_-	peptidase	NA	NA	NA	NA
AZY44599.1\|646430_647270_+	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	1.1e-66	48.9
AZY44600.1\|647291_648173_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA
AZY44601.1\|648254_649349_-	porin	NA	NA	NA	NA
AZY44602.1\|649642_650593_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY47467.1\|650667_651609_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44603.1\|651692_652052_-	hypothetical protein	NA	NA	NA	NA
AZY44604.1\|652433_653471_-	hypothetical protein	NA	NA	NA	NA
AZY44605.1\|653787_655128_+	peptidase M24 family protein	NA	NA	NA	NA
AZY44606.1\|655137_655590_-	hypothetical protein	NA	NA	NA	NA
AZY44607.1\|655686_656868_+	monooxygenase	NA	NA	NA	NA
AZY44608.1\|656927_657959_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
AZY44609.1\|657999_658239_+	Fis family transcriptional regulator	NA	NA	NA	NA
AZY44610.1\|658308_659898_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	Q58MG4	Prochlorococcus_phage	8.7e-65	47.2
AZY44611.1\|659897_660446_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
AZY44612.1\|660526_661099_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
AZY44613.1\|661117_662029_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA
AZY44614.1\|662102_663071_-	threonine/serine dehydratase	NA	NA	NA	NA
AZY44615.1\|663193_664267_+	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	2.3e-08	25.7
AZY44616.1\|664271_666092_-	DNA helicase RecQ	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	3.1e-74	35.3
AZY44617.1\|666168_667119_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44618.1\|667207_667543_+	ASCH domain-containing protein	NA	NA	NA	NA
AZY44619.1\|667676_668327_+	carbonic anhydrase	NA	NA	NA	NA
AZY47468.1\|668348_669767_-	amidase	NA	NA	NA	NA
AZY44620.1\|669836_670592_-	hypothetical protein	NA	NA	NA	NA
AZY47469.1\|670560_671319_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY44621.1\|671329_672211_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY44622.1\|672227_672935_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.2e-07	25.4
AZY44623.1\|672937_673696_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	4.4e-14	24.4
AZY44624.1\|673905_675648_+	nitrite/sulfite reductase	NA	NA	NA	NA
AZY44625.1\|675640_676165_+	DUF934 domain-containing protein	NA	NA	NA	NA
AZY44626.1\|676204_676999_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY44627.1\|677166_678240_+	hypothetical protein	NA	NA	NA	NA
AZY44628.1\|678338_679289_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44629.1\|679540_679753_-	hypothetical protein	NA	NA	NA	NA
AZY47470.1\|679818_680430_-	LexA family transcriptional repressor	NA	NA	NA	NA
AZY44630.1\|680909_681230_-	hypothetical protein	NA	NA	NA	NA
AZY44631.1\|681222_681921_-	hypothetical protein	NA	NA	NA	NA
AZY44632.1\|681935_682157_-	hypothetical protein	NA	NA	NA	NA
AZY44633.1\|682174_683125_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY47471.1\|683800_684250_+\|terminase	terminase	C7U0W1	Enterobacteria_phage	5.2e-39	61.5
AZY44634.1\|684236_685514_+\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	2.4e-150	64.7
AZY44635.1\|685516_686935_+	DUF4055 domain-containing protein	R9TF43	Synechococcus_phage	2.2e-99	42.1
AZY47472.1\|686963_688019_+	hypothetical protein	A0A0H5BBX3	Pseudomonas_phage	2.6e-97	50.6
AZY44636.1\|688024_688267_+	hypothetical protein	A0A0H5AUE5	Pseudomonas_phage	5.6e-16	53.2
AZY44637.1\|688389_688992_+	hypothetical protein	R9TF81	Synechococcus_phage	7.9e-27	43.6
AZY44638.1\|689420_690371_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44639.1\|690388_691036_+	hypothetical protein	R9TJ64	Synechococcus_phage	2.7e-65	71.1
AZY44640.1\|691045_691297_+	hypothetical protein	NA	NA	NA	NA
AZY44641.1\|691359_691842_+	hypothetical protein	A0A2H4JE38	uncultured_Caudovirales_phage	1.8e-13	37.1
AZY44642.1\|691843_692044_+	hypothetical protein	NA	NA	NA	NA
AZY44643.1\|692043_692439_+	hypothetical protein	A0A2D2W284	Stenotrophomonas_phage	7.8e-07	35.0
AZY44644.1\|692435_692834_+	hypothetical protein	I6PCW1	Cronobacter_phage	4.2e-16	38.0
AZY44645.1\|692830_693253_+	hypothetical protein	NA	NA	NA	NA
AZY44646.1\|693260_693761_+	HNH endonuclease	A0A1I9SEX5	Klebsiella_phage	4.4e-31	45.1
AZY44647.1\|694015_694534_+\|tail	phage tail protein	A0A1S5R1H0	Pseudomonas_phage	5.4e-24	38.3
AZY44648.1\|694543_694873_+	hypothetical protein	A0A2H4J121	uncultured_Caudovirales_phage	2.9e-15	44.0
AZY44649.1\|694890_695181_+	hypothetical protein	A0A2H4JBP7	uncultured_Caudovirales_phage	3.7e-14	45.2
AZY44650.1\|695206_697819_+\|tail	phage tail tape measure protein	A0A2H4J107	uncultured_Caudovirales_phage	4.9e-105	38.6
AZY44651.1\|697828_698188_+	hypothetical protein	NA	NA	NA	NA
AZY44652.1\|698255_698789_+	DUF1833 domain-containing protein	A5A3Q9	Burkholderia_phage	1.1e-40	46.9
AZY44653.1\|698785_699175_+	hypothetical protein	A0A0G3EYJ9	Achromobacter_phage	3.0e-35	50.0
AZY44654.1\|699167_703124_+	DUF1983 domain-containing protein	A0A0B5A1N2	Achromobacter_phage	3.9e-215	40.8
AZY44655.1\|703128_703545_+	hypothetical protein	NA	NA	NA	NA
AZY44656.1\|703763_704027_+	hypothetical protein	A0A1B0V3F2	Roseobacter_phage	7.2e-09	41.8
AZY44657.1\|704026_704839_+	hypothetical protein	NA	NA	NA	NA
AZY44658.1\|704843_705086_+	hypothetical protein	NA	NA	NA	NA
AZY44659.1\|705064_705616_+	lysozyme	NA	NA	NA	NA
AZY44660.1\|705597_706131_+	DUF2514 domain-containing protein	NA	NA	NA	NA
AZY47473.1\|706127_706409_-	hypothetical protein	NA	NA	NA	NA
AZY44661.1\|706751_706952_+	hypothetical protein	NA	NA	NA	NA
AZY44662.1\|706958_707630_-	SOS response-associated peptidase	Q5QF62	Pseudomonas_virus	4.7e-36	39.9
AZY47474.1\|707985_708672_-	DNA-binding response regulator	NA	NA	NA	NA
AZY44663.1\|708652_709225_-	RNA pyrophosphohydrolase	NA	NA	NA	NA
AZY44664.1\|709290_711021_+\|tRNA	proline--tRNA ligase	A0A2K9L3R9	Tupanvirus	4.6e-11	29.4
AZY44665.1\|711073_711502_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA
AZY44666.1\|711504_712185_+	protein TolQ	NA	NA	NA	NA
AZY44667.1\|712184_712643_+	protein TolR	NA	NA	NA	NA
AZY44668.1\|712679_713654_+	cell envelope integrity protein TolA	NA	NA	NA	NA
AZY44669.1\|713670_714987_+	protein TolB	NA	NA	NA	NA
AZY44670.1\|715018_715516_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA
AZY44671.1\|715602_716292_+	tol-pal system protein YbgF	NA	NA	NA	NA
AZY44672.1\|716291_717341_+	iron ABC transporter permease	NA	NA	NA	NA
AZY44673.1\|717337_718132_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-15	30.6
AZY44674.1\|718300_718651_+	hypothetical protein	NA	NA	NA	NA
AZY44675.1\|718626_719184_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY44676.1\|720108_720327_+	hypothetical protein	NA	NA	NA	NA
AZY44677.1\|720313_721264_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

748189 : 821351

Streptococcus_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY44698.1\|748189_749140_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44699.1\|749794_750892_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA
AZY44700.1\|750925_752191_+	saccharopine dehydrogenase	NA	NA	NA	NA
AZY44701.1\|752348_753299_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44702.1\|753542_754133_+	polyisoprenoid-binding protein	NA	NA	NA	NA
AZY44703.1\|754148_756593_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
AZY44704.1\|756712_757684_-	FecR family protein	NA	NA	NA	NA
AZY44705.1\|757815_758340_+	RNA polymerase subunit sigma	NA	NA	NA	NA
AZY44706.1\|758299_759250_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44707.1\|759471_761667_-	DNA methylase	NA	NA	NA	NA
AZY44708.1\|761739_762147_-	XRE family transcriptional regulator	NA	NA	NA	NA
AZY44709.1\|762269_763220_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44710.1\|763335_763779_-	transcriptional regulator	NA	NA	NA	NA
AZY44711.1\|763841_764636_+	DNA-binding response regulator	NA	NA	NA	NA
AZY44712.1\|764801_765938_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	5.8e-63	44.8
AZY44713.1\|766008_767142_-	GTPase ObgE	NA	NA	NA	NA
AZY44714.1\|767291_767552_-	50S ribosomal protein L27	NA	NA	NA	NA
AZY44715.1\|767585_767897_-	50S ribosomal protein L21	NA	NA	NA	NA
AZY44716.1\|768321_769470_+	fumarylacetoacetate hydrolase	NA	NA	NA	NA
AZY44717.1\|769584_770550_+	octaprenyl diphosphate synthase	NA	NA	NA	NA
AZY44718.1\|770818_771685_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY44719.1\|771815_773864_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA
AZY44720.1\|773881_775879_+	hydantoin utilization protein B	NA	NA	NA	NA
AZY44721.1\|775913_777251_+	FAD-binding oxidoreductase	NA	NA	NA	NA
AZY44722.1\|777513_779367_+	hypothetical protein	NA	NA	NA	NA
AZY44723.1\|779421_780903_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
AZY44724.1\|780918_781506_-	cyclolysin-activating lysine-acyltransferase CyaC	NA	NA	NA	NA
AZY44725.1\|781588_781768_+	hypothetical protein	NA	NA	NA	NA
AZY44726.1\|781954_787075_+	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA
AZY44727.1\|787152_789291_+	cyclolysin secretion/processing ATP-binding protein CyaB	W8CYL7	Bacillus_phage	2.7e-45	29.2
AZY44728.1\|789287_790610_+	protein CyaD	NA	NA	NA	NA
AZY44729.1\|790611_792036_+	protein CyaE	NA	NA	NA	NA
AZY44730.1\|792126_793035_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY44731.1\|793099_794014_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY44732.1\|794851_795535_+	amino acid ABC transporter permease	NA	NA	NA	NA
AZY44733.1\|795551_796295_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.5e-32	42.4
AZY44734.1\|796324_797185_+	aminotransferase	NA	NA	NA	NA
AZY44735.1\|797192_797759_-	hypothetical protein	NA	NA	NA	NA
AZY44736.1\|797847_798804_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY44737.1\|798848_799601_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZY44738.1\|799597_801343_-	acetolactate synthase catalytic subunit	NA	NA	NA	NA
AZY44739.1\|801427_802162_+	GntR family transcriptional regulator	NA	NA	NA	NA
AZY44740.1\|802478_803501_+	autotransporter domain-containing protein	NA	NA	NA	NA
AZY44741.1\|803516_804239_-	GntR family transcriptional regulator	NA	NA	NA	NA
AZY44742.1\|804383_805391_-	zinc-binding dehydrogenase	NA	NA	NA	NA
AZY44743.1\|805431_806964_-	long-chain fatty acid--CoA ligase	NA	NA	NA	NA
AZY44744.1\|806960_808079_-	DUF2817 domain-containing protein	NA	NA	NA	NA
AZY44745.1\|808075_808858_-	ABC transporter permease	NA	NA	NA	NA
AZY44746.1\|808869_809733_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.6e-34	38.9
AZY47476.1\|809751_810849_-	hypothetical protein	NA	NA	NA	NA
AZY44747.1\|810917_811844_-	VOC family protein	NA	NA	NA	NA
AZY44748.1\|811878_813573_-	thiamine pyrophosphate-binding protein	NA	NA	NA	NA
AZY44749.1\|813772_814708_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
AZY44750.1\|814813_815764_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44751.1\|815862_816519_-	DUF4136 domain-containing protein	NA	NA	NA	NA
AZY44752.1\|816666_819375_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	2.8e-15	24.0
AZY44753.1\|819384_820404_+	fructose 1,6-bisphosphatase	A0A1V0SKX4	Klosneuvirus	1.5e-49	35.7
AZY44754.1\|820400_821351_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

854098 : 903362

Vibrio_phage(33.33%)

transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY44783.1\|854098_855049_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY47477.1\|855021_855621_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY44784.1\|855622_856057_+	PaaI family thioesterase	NA	NA	NA	NA
AZY44785.1\|856053_856488_+	hypothetical protein	NA	NA	NA	NA
AZY44786.1\|856471_857275_-	phosphatase PAP2 family protein	NA	NA	NA	NA
AZY44787.1\|857291_858107_-	DNA repair exonuclease	NA	NA	NA	NA
AZY47478.1\|858103_858919_-	diacylglycerol kinase	NA	NA	NA	NA
AZY44788.1\|859065_859767_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY44789.1\|859794_861753_-\|holin	choline transporter	A0A2I7QNT1	Vibrio_phage	8.0e-28	30.3
AZY44790.1\|861835_862786_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44791.1\|863006_863675_+	transcriptional regulator	NA	NA	NA	NA
AZY44792.1\|863798_864905_+	efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
AZY44793.1\|864917_868031_+	MexW/MexI family multidrug efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	4.5e-57	21.5
AZY44794.1\|868027_869521_+	RND transporter	NA	NA	NA	NA
AZY44795.1\|869535_870207_+	transcriptional regulator	NA	NA	NA	NA
AZY44796.1\|870250_870745_-	azurin	NA	NA	NA	NA
AZY44797.1\|870885_871533_-	transcriptional regulator	NA	NA	NA	NA
AZY47479.1\|871636_873685_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA
AZY44798.1\|873681_875694_+	hydantoin utilization protein B	NA	NA	NA	NA
AZY47480.1\|875719_877054_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
AZY44799.1\|877162_878155_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY44800.1\|878221_880306_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
AZY44801.1\|880330_881302_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY44802.1\|881430_882432_-	peptidase M14	NA	NA	NA	NA
AZY44803.1\|882465_883707_-	cystathionine beta-lyase	NA	NA	NA	NA
AZY44804.1\|883787_884711_+	transcriptional regulator LrhA	NA	NA	NA	NA
AZY44805.1\|884788_885613_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AZY44806.1\|885809_886826_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY44807.1\|887022_888006_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY44808.1\|889604_890993_-	MmgE/PrpD family protein	NA	NA	NA	NA
AZY44809.1\|891023_892013_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY44810.1\|892123_893356_-	methylaspartate ammonia-lyase	NA	NA	NA	NA
AZY44811.1\|893637_894438_+	IclR family transcriptional regulator	NA	NA	NA	NA
AZY44812.1\|894460_896692_-\|holin	high-affinity choline transporter BetT	NA	NA	NA	NA
AZY44813.1\|897479_897926_-	preprotein translocase subunit SecG	NA	NA	NA	NA
AZY44814.1\|897947_898694_-	triose-phosphate isomerase	NA	NA	NA	NA
AZY44815.1\|898837_899815_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA
AZY44816.1\|900448_901060_+	PIN domain-containing protein	K4HZX4	Acidithiobacillus_phage	3.3e-12	32.5
AZY44817.1\|901053_902271_-	threonine ammonia-lyase	NA	NA	NA	NA
AZY44818.1\|902411_903362_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

912974 : 977914

Bacillus_phage(18.18%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY44827.1\|912974_913925_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44828.1\|913921_915772_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.3e-27	26.4
AZY44829.1\|916152_916812_+	thiopurine S-methyltransferase	NA	NA	NA	NA
AZY44830.1\|916899_917052_+	hypothetical protein	NA	NA	NA	NA
AZY44831.1\|917160_917328_+	hypothetical protein	NA	NA	NA	NA
AZY44832.1\|917339_918020_-	DUF3313 domain-containing protein	NA	NA	NA	NA
AZY44833.1\|918301_919018_+	flagellar brake protein	NA	NA	NA	NA
AZY44834.1\|919032_920334_-	phospholipase	NA	NA	NA	NA
AZY44835.1\|922478_925367_+	HD domain-containing protein	NA	NA	NA	NA
AZY44836.1\|925590_926943_+	MmgE/PrpD family protein	NA	NA	NA	NA
AZY44837.1\|926971_927493_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
AZY44838.1\|927489_928944_+	carboxylase	NA	NA	NA	NA
AZY44839.1\|928978_929227_+	hypothetical protein	NA	NA	NA	NA
AZY44840.1\|929332_930208_+	hypothetical protein	NA	NA	NA	NA
AZY44841.1\|930233_931289_+	hypothetical protein	NA	NA	NA	NA
AZY44842.1\|931301_932093_+	GntR family transcriptional regulator	NA	NA	NA	NA
AZY44843.1\|932125_933496_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
AZY44844.1\|934672_935623_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44845.1\|935675_935897_+	hypothetical protein	NA	NA	NA	NA
AZY44846.1\|936056_936269_+	hypothetical protein	NA	NA	NA	NA
AZY44847.1\|936388_937507_+	mannose-6-phosphate isomerase	NA	NA	NA	NA
AZY44848.1\|937603_937819_+	hypothetical protein	NA	NA	NA	NA
AZY44849.1\|938012_938264_+	hypothetical protein	NA	NA	NA	NA
AZY44850.1\|938376_939327_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44851.1\|939323_939707_-	ferredoxin	NA	NA	NA	NA
AZY44852.1\|939761_941579_-	ABC transporter ATP-binding protein/permease	W8CYL7	Bacillus_phage	5.7e-44	27.9
AZY44853.1\|941725_942553_+	oxidoreductase	A0A2H4PQR8	Staphylococcus_phage	1.7e-67	47.4
AZY44854.1\|942598_943579_+	aldo/keto reductase	NA	NA	NA	NA
AZY44855.1\|943575_943788_-	hypothetical protein	NA	NA	NA	NA
AZY44856.1\|943784_944966_-	PepSY domain-containing protein	NA	NA	NA	NA
AZY44857.1\|945129_945864_+	serine/threonine protein phosphatase	A0A2H4J0P0	uncultured_Caudovirales_phage	1.9e-62	49.2
AZY44858.1\|945865_948478_-	penicillin-binding protein	NA	NA	NA	NA
AZY44859.1\|948613_950527_-	S9 family peptidase	NA	NA	NA	NA
AZY44860.1\|951142_951553_-	PaaI family thioesterase	NA	NA	NA	NA
AZY44861.1\|951650_952736_+	DNA polymerase IV	NA	NA	NA	NA
AZY44862.1\|952834_953785_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44863.1\|953781_954756_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY44864.1\|954880_955792_+	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	4.4e-05	27.6
AZY47482.1\|956068_956461_-	type II toxin-antitoxin system HicB family antitoxin	A0A0R6PJ17	Moraxella_phage	4.8e-25	45.0
AZY44865.1\|956590_957541_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44866.1\|957570_957753_-	addiction module toxin, HicA family	A0A1L2JY37	Aeribacillus_phage	3.7e-12	56.1
AZY44867.1\|957791_958049_-	hypothetical protein	NA	NA	NA	NA
AZY44868.1\|958525_959707_-	MFS transporter	NA	NA	NA	NA
AZY44869.1\|959922_960600_-	phosphoglycolate phosphatase	NA	NA	NA	NA
AZY44870.1\|960596_961370_-	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA
AZY44871.1\|961447_962029_-	OmpA family protein	NA	NA	NA	NA
AZY44872.1\|962399_965081_+	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	3.2e-104	33.5
AZY44873.1\|965080_966214_+	phosphoserine aminotransferase	M1Q1P2	Streptococcus_phage	6.4e-78	44.0
AZY44874.1\|966206_967292_+	prephenate dehydratase	NA	NA	NA	NA
AZY44875.1\|967378_968278_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA
AZY44876.1\|968274_969603_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
AZY44877.1\|969617_970289_+	cytidylate kinase	NA	NA	NA	NA
AZY44878.1\|970461_972192_+	30S ribosomal protein S1	NA	NA	NA	NA
AZY44879.1\|972193_972553_+	integration host factor subunit beta	NA	NA	NA	NA
AZY44880.1\|972744_973059_+	DUF1049 domain-containing protein	NA	NA	NA	NA
AZY44881.1\|973101_974322_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA
AZY44882.1\|974318_975260_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	1.5e-16	28.1
AZY44883.1\|975256_976246_+	ADP-L-glycero-D-mannoheptose-6-epimerase	E3SJ87	Synechococcus_phage	2.2e-26	34.4
AZY44884.1\|976280_976865_+	DUF655 domain-containing protein	NA	NA	NA	NA
AZY44885.1\|976963_977914_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

997314 : 1060465

Enterococcus_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY44899.1\|997314_998265_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44900.1\|998369_999419_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA
AZY44901.1\|999556_1000573_-\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AZY44902.1\|1002081_1002654_-	chorismate--pyruvate lyase	NA	NA	NA	NA
AZY44903.1\|1002713_1003445_+	rRNA pseudouridine synthase	NA	NA	NA	NA
AZY47485.1\|1003496_1004414_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY44904.1\|1005221_1008401_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AZY44905.1\|1008397_1009780_+	multidrug transporter	NA	NA	NA	NA
AZY44906.1\|1009849_1010101_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
AZY44907.1\|1010246_1010897_-	SCO family protein	NA	NA	NA	NA
AZY44908.1\|1011047_1013162_-	M3 family peptidase	NA	NA	NA	NA
AZY44909.1\|1013237_1014089_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	2.1e-33	39.8
AZY44910.1\|1014085_1014712_-	DNA-binding response regulator	NA	NA	NA	NA
AZY44911.1\|1014708_1016463_-	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA
AZY44912.1\|1016755_1019461_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA
AZY44913.1\|1019473_1021135_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA
AZY44914.1\|1021147_1022938_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.4e-39	25.2
AZY44915.1\|1023159_1024335_-	flagellin FliC	NA	NA	NA	NA
AZY44916.1\|1024377_1025328_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44917.1\|1025426_1026167_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
AZY44918.1\|1026361_1028398_+	transketolase	NA	NA	NA	NA
AZY44919.1\|1028415_1029426_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
AZY44920.1\|1029543_1030737_+	phosphoglycerate kinase	NA	NA	NA	NA
AZY44921.1\|1030766_1031540_-	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA
AZY44922.1\|1031536_1032727_-	acetate kinase	NA	NA	NA	NA
AZY44923.1\|1032752_1033691_-	phosphate acetyltransferase	NA	NA	NA	NA
AZY47486.1\|1033687_1036036_-	DUF3141 domain-containing protein	NA	NA	NA	NA
AZY44924.1\|1036190_1036898_-	glutathione S-transferase	NA	NA	NA	NA
AZY44925.1\|1036935_1038069_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44926.1\|1038345_1038894_-	damage-inducible protein DinB	NA	NA	NA	NA
AZY44927.1\|1038912_1039398_-	N-acetyltransferase	NA	NA	NA	NA
AZY44928.1\|1039575_1040514_+	curved DNA-binding protein	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	5.6e-11	24.1
AZY44929.1\|1040516_1040834_+	MerR family transcriptional regulator	NA	NA	NA	NA
AZY44930.1\|1040879_1041824_+	hypothetical protein	NA	NA	NA	NA
AZY44931.1\|1043504_1044155_+	molybdopterin adenylyltransferase	NA	NA	NA	NA
AZY44932.1\|1044208_1044544_+	hypothetical protein	NA	NA	NA	NA
AZY44933.1\|1044540_1045401_+	M23 family peptidase	A0A292GJG6	Xanthomonas_phage	2.6e-15	36.1
AZY44934.1\|1045417_1045699_-	hypothetical protein	NA	NA	NA	NA
AZY44935.1\|1045772_1046036_-	translation initiation factor IF-1	NA	NA	NA	NA
AZY44936.1\|1046279_1047230_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44937.1\|1047528_1048266_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA
AZY44938.1\|1048701_1049025_+	flagellar transcriptional activator FlhD	NA	NA	NA	NA
AZY44939.1\|1049059_1049620_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
AZY44940.1\|1049740_1050616_+	flagellar motor stator protein MotA	NA	NA	NA	NA
AZY44941.1\|1050628_1051576_+	motility protein MotB	NA	NA	NA	NA
AZY44942.1\|1051677_1051971_+	response regulator	NA	NA	NA	NA
AZY44943.1\|1051997_1054055_+	chemotaxis protein CheA	NA	NA	NA	NA
AZY44944.1\|1054069_1054570_+	chemotaxis protein CheW	NA	NA	NA	NA
AZY44945.1\|1054643_1056350_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.4e-12	41.7
AZY44946.1\|1057213_1058266_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA
AZY44947.1\|1058318_1058708_+	chemotaxis protein CheY	Q56AR1	Bacillus_thuringiensis_phage	5.7e-10	33.3
AZY44948.1\|1058716_1059349_+	protein phosphatase CheZ	NA	NA	NA	NA
AZY44949.1\|1059448_1060465_-\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_10

1066449 : 1134611

uncultured_Mediterranean_phage(25.0%)

transposase,holin,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY44954.1\|1066449_1067877_-\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
AZY44955.1\|1068814_1069831_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY44956.1\|1070163_1071099_-	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	3.0e-41	35.5
AZY44957.1\|1071148_1073029_-	protein translocase subunit SecD	NA	NA	NA	NA
AZY44958.1\|1073095_1073440_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	1.0e-10	40.4
AZY44959.1\|1073584_1074721_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.9e-85	44.4
AZY44960.1\|1074717_1075791_-\|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	NA	NA	NA	NA
AZY44961.1\|1075948_1077385_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA
AZY47488.1\|1077475_1078117_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
AZY44962.1\|1078452_1079469_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY44963.1\|1079801_1082549_+	pertactin autotransporter	NA	NA	NA	NA
AZY47489.1\|1082615_1084037_-	siroheme synthase	NA	NA	NA	NA
AZY44964.1\|1084300_1085017_+	hypothetical protein	NA	NA	NA	NA
AZY44965.1\|1085101_1085419_+	DUF883 domain-containing protein	NA	NA	NA	NA
AZY44966.1\|1085459_1085873_+\|holin	phage holin family protein	NA	NA	NA	NA
AZY44967.1\|1085874_1086234_+	hypothetical protein	NA	NA	NA	NA
AZY44968.1\|1086276_1087821_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA
AZY44969.1\|1087904_1088735_+	transglycosylase	NA	NA	NA	NA
AZY44970.1\|1088769_1089924_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
AZY44971.1\|1089966_1090839_+	hypothetical protein	NA	NA	NA	NA
AZY44972.1\|1090955_1093244_+	NADP-dependent malic enzyme	NA	NA	NA	NA
AZY44973.1\|1094450_1094915_+	barstar family protein 2	NA	NA	NA	NA
AZY44974.1\|1094941_1095892_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY47490.1\|1096259_1097036_-	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.3e-17	28.7
AZY44975.1\|1097080_1097938_-	phosphate ABC transporter, permease protein PstA	NA	NA	NA	NA
AZY44976.1\|1097959_1098976_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
AZY44977.1\|1099110_1100151_-	phosphate ABC transporter substrate-binding protein PstS	M4QHS4	Cyanophage	2.1e-51	40.2
AZY44978.1\|1100345_1102427_-	polyphosphate kinase 1	NA	NA	NA	NA
AZY44979.1\|1102662_1104156_+	exopolyphosphatase	NA	NA	NA	NA
AZY44980.1\|1104386_1105181_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AZY44981.1\|1105401_1106760_-	phosphoglucosamine mutase	NA	NA	NA	NA
AZY44982.1\|1106756_1107599_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	3.2e-26	32.5
AZY44983.1\|1107617_1109504_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	M4QMW8	Micromonas_pusilla_virus	1.4e-109	41.5
AZY44984.1\|1109741_1110374_-	ribosomal RNA large subunit methyltransferase E	NA	NA	NA	NA
AZY44985.1\|1110392_1110995_+	hypothetical protein	NA	NA	NA	NA
AZY44986.1\|1111146_1112097_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44987.1\|1112899_1113700_-	hypothetical protein	NA	NA	NA	NA
AZY44988.1\|1113743_1114730_-	homoserine kinase	NA	NA	NA	NA
AZY44989.1\|1114869_1115883_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
AZY44990.1\|1115879_1116830_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44991.1\|1116942_1117401_-	CBS domain-containing protein	NA	NA	NA	NA
AZY44992.1\|1117437_1118751_-	hypothetical protein	NA	NA	NA	NA
AZY44993.1\|1118768_1119140_+	DUF2069 domain-containing protein	NA	NA	NA	NA
AZY44994.1\|1119136_1120600_+	YdiU family protein	A0A075BSJ0	Microcystis_phage	1.7e-43	32.5
AZY44995.1\|1120692_1121469_+	DNA-binding response regulator	NA	NA	NA	NA
AZY44996.1\|1121450_1124330_-	diguanylate phosphodiesterase	NA	NA	NA	NA
AZY44997.1\|1124512_1125463_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY44998.1\|1125630_1126455_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.0e-08	22.7
AZY44999.1\|1126454_1127333_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY45000.1\|1128237_1129353_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY45001.1\|1129360_1130176_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	7.5e-12	23.7
AZY45002.1\|1130172_1132038_+	long-chain fatty acid--CoA ligase	A0A1V0SBX8	Catovirus	9.3e-50	23.3
AZY45003.1\|1132116_1132749_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY45004.1\|1132745_1133048_-	hypothetical protein	NA	NA	NA	NA
AZY45005.1\|1133090_1134611_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	1.2e-82	36.0

DBSCAN-SWA_11

1316903 : 1385390

Planktothrix_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY45147.1\|1316903_1317854_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45148.1\|1318622_1319261_-	glutathione S-transferase	NA	NA	NA	NA
AZY47501.1\|1320150_1320597_+	glutamate racemase	NA	NA	NA	NA
AZY45149.1\|1320678_1321380_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-17	30.4
AZY45150.1\|1321380_1322148_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-14	26.4
AZY45151.1\|1322144_1323383_-	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA
AZY45152.1\|1323382_1324309_-	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA
AZY45153.1\|1324411_1325527_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY45154.1\|1325542_1326493_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45155.1\|1326846_1327428_-	hypothetical protein	A0A2I7SAW6	Vibrio_phage	9.4e-17	37.3
AZY45156.1\|1327424_1328258_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA
AZY47502.1\|1328468_1329782_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA
AZY45157.1\|1329958_1330840_+	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA
AZY45158.1\|1330859_1331711_+	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA
AZY45159.1\|1331763_1332852_+	sn-glycerol-3-phosphate import ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	2.2e-19	31.2
AZY45160.1\|1332962_1334090_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY47503.1\|1334324_1334936_+	alpha/beta hydrolase	NA	NA	NA	NA
AZY45161.1\|1335034_1335985_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45162.1\|1336206_1336584_-	DUF423 domain-containing protein	NA	NA	NA	NA
AZY47504.1\|1336731_1337229_+	DUF2384 domain-containing protein	NA	NA	NA	NA
AZY45163.1\|1337225_1337753_+	RES domain-containing protein	NA	NA	NA	NA
AZY45164.1\|1337886_1338702_+	iron ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY45165.1\|1338714_1339896_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
AZY45166.1\|1339943_1340837_-	phosphatidylserine decarboxylase proenzyme	NA	NA	NA	NA
AZY47505.1\|1340963_1341434_-	hypothetical protein	NA	NA	NA	NA
AZY45167.1\|1341559_1342387_-	DUF3298 domain-containing protein	NA	NA	NA	NA
AZY45168.1\|1342415_1343192_-	lipoate--protein ligase family protein	NA	NA	NA	NA
AZY45169.1\|1343188_1343482_-	biotin--protein ligase	NA	NA	NA	NA
AZY45170.1\|1343478_1343943_-	N-acetyltransferase	NA	NA	NA	NA
AZY45171.1\|1343954_1344740_-	thiol:disulfide oxidoreductase	NA	NA	NA	NA
AZY45172.1\|1344765_1345266_-	glutathione peroxidase	Q6VZR0	Canarypox_virus	4.7e-25	38.4
AZY45173.1\|1345348_1346527_-	DUF1501 domain-containing protein	NA	NA	NA	NA
AZY45174.1\|1348154_1348490_+	tetratricopeptide repeat protein	NA	NA	NA	NA
AZY45175.1\|1348677_1350126_+	CoA transferase	NA	NA	NA	NA
AZY45176.1\|1350183_1350528_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	3.0e-31	58.4
AZY45177.1\|1350634_1351174_-	peroxiredoxin	NA	NA	NA	NA
AZY45178.1\|1351266_1352217_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45179.1\|1352203_1352686_-	hypothetical protein	NA	NA	NA	NA
AZY45180.1\|1352955_1353387_-	hypothetical protein	NA	NA	NA	NA
AZY45181.1\|1353568_1353973_-	DoxX family protein	NA	NA	NA	NA
AZY45182.1\|1355209_1355533_+	hypothetical protein	NA	NA	NA	NA
AZY45183.1\|1355535_1356423_-	aldo/keto reductase	NA	NA	NA	NA
AZY45184.1\|1356455_1356881_-	universal stress protein	NA	NA	NA	NA
AZY45185.1\|1356952_1357306_-	hypothetical protein	NA	NA	NA	NA
AZY45186.1\|1357545_1358052_-	hypothetical protein	NA	NA	NA	NA
AZY45187.1\|1358090_1359422_-	transcriptional regulator PtsJ	NA	NA	NA	NA
AZY45188.1\|1359481_1360297_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
AZY45189.1\|1360293_1361148_+	pyridoxine/pyridoxal/pyridoxamine kinase	NA	NA	NA	NA
AZY47506.1\|1364210_1366754_-	malto-oligosyltrehalose synthase	NA	NA	NA	NA
AZY45190.1\|1368120_1369875_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA
AZY45191.1\|1369871_1371992_-	glycogen debranching enzyme GlgX	NA	NA	NA	NA
AZY45192.1\|1371996_1374192_-	1,4-alpha-glucan-branching protein	NA	NA	NA	NA
AZY47507.1\|1374188_1377530_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA
AZY45193.1\|1380332_1381283_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45194.1\|1381348_1381528_-	hypothetical protein	NA	NA	NA	NA
AZY47508.1\|1381644_1382367_-	alpha/beta hydrolase	NA	NA	NA	NA
AZY45195.1\|1382386_1383532_-	DUF3182 domain-containing protein	NA	NA	NA	NA
AZY45196.1\|1384439_1385390_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_12

1445881 : 1501369

Mollivirus(16.67%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY45244.1\|1445881_1446832_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45245.1\|1448033_1448480_-	flagellar export protein FliJ	NA	NA	NA	NA
AZY45246.1\|1448472_1449948_-	flagellar protein export ATPase FliI	NA	NA	NA	NA
AZY45247.1\|1449944_1450700_-	flagellar assembly protein FliH	NA	NA	NA	NA
AZY45248.1\|1450692_1451703_-	flagellar motor switch protein FliG	NA	NA	NA	NA
AZY45249.1\|1451692_1453369_-	flagellar basal body M-ring protein FliF	NA	NA	NA	NA
AZY45250.1\|1453681_1454014_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA
AZY45251.1\|1454027_1454423_-	hypothetical protein	NA	NA	NA	NA
AZY45252.1\|1454432_1454759_-	flagellar biosynthesis protein FlhB	NA	NA	NA	NA
AZY45253.1\|1454755_1455082_-	flagellar hook-length control protein FliK	NA	NA	NA	NA
AZY45254.1\|1455008_1456031_-	flagellar hook-length control protein FliK	NA	NA	NA	NA
AZY45255.1\|1456027_1456408_-	flagellar protein FliT	NA	NA	NA	NA
AZY45256.1\|1456425_1456854_-	flagellar export chaperone FliS	NA	NA	NA	NA
AZY45257.1\|1456861_1458235_-	flagellar hook protein FliD	NA	NA	NA	NA
AZY47512.1\|1458375_1458753_-	flagellar protein	NA	NA	NA	NA
AZY45258.1\|1459015_1460323_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA
AZY45259.1\|1460383_1461214_+	SPOR domain-containing protein	NA	NA	NA	NA
AZY45260.1\|1461210_1461699_+	colicin V synthesis protein	NA	NA	NA	NA
AZY45261.1\|1461740_1463261_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	4.8e-97	43.7
AZY47513.1\|1463304_1463781_-	disulfide bond formation protein B	NA	NA	NA	NA
AZY45262.1\|1464584_1467182_-	bifunctional uridylyltransferase/uridylyl-removing protein	NA	NA	NA	NA
AZY45263.1\|1467211_1468033_-	type I methionyl aminopeptidase	NA	NA	NA	NA
AZY45264.1\|1468759_1469509_+	30S ribosomal protein S2	NA	NA	NA	NA
AZY45265.1\|1469641_1470571_+	elongation factor Ts	NA	NA	NA	NA
AZY45266.1\|1470668_1471385_+	UMP kinase	NA	NA	NA	NA
AZY45267.1\|1471399_1471960_+	ribosome-recycling factor	NA	NA	NA	NA
AZY45268.1\|1471997_1472891_+	di-trans,poly-cis-decaprenylcistransferase	R9W0U9	Flavobacterium_phage	2.0e-18	36.1
AZY45269.1\|1472910_1473768_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
AZY45270.1\|1473764_1474964_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
AZY45271.1\|1475003_1476338_+\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
AZY45272.1\|1476390_1478727_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
AZY47514.1\|1478852_1479416_+	outer membrane protein chaperone	NA	NA	NA	NA
AZY45273.1\|1479424_1480516_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
AZY45274.1\|1480587_1481043_+	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA
AZY45275.1\|1481043_1481838_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
AZY45276.1\|1481834_1483016_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
AZY45277.1\|1483002_1483608_+	ribonuclease HII	G9E3X7	Emiliania_huxleyi_virus	8.8e-26	40.2
AZY45278.1\|1483604_1484378_+	RNA methyltransferase	NA	NA	NA	NA
AZY45279.1\|1484389_1485217_-	phosphoenolpyruvate synthase regulatory protein	NA	NA	NA	NA
AZY45280.1\|1485378_1487742_+	phosphoenolpyruvate synthase	A0A1V0SGR7	Hokovirus	2.2e-165	35.9
AZY45281.1\|1487809_1488529_-	GMP synthase	NA	NA	NA	NA
AZY45282.1\|1488652_1489078_+	NfeD-like family protein 1	NA	NA	NA	NA
AZY45283.1\|1489112_1490063_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45284.1\|1490180_1491107_+	paraslipin	NA	NA	NA	NA
AZY45285.1\|1491172_1492330_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	2.3e-14	36.2
AZY45286.1\|1492310_1492778_-	SsrA-binding protein	W5RAM5	Staphylococcus_phage	6.2e-27	45.1
AZY45287.1\|1492925_1493876_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45288.1\|1493892_1494327_+	ubiquinone-binding protein	NA	NA	NA	NA
AZY45289.1\|1494316_1494667_+	RnfH family protein	NA	NA	NA	NA
AZY45290.1\|1494863_1496018_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AZY45291.1\|1496014_1497187_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AZY45292.1\|1497234_1498128_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA
AZY45293.1\|1498173_1498611_+	PaaI family thioesterase	NA	NA	NA	NA
AZY45294.1\|1498670_1499360_+	VIT family protein	NA	NA	NA	NA
AZY45295.1\|1499369_1500320_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45296.1\|1500418_1501369_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_13

1793939 : 1841954

Moraxella_phage(16.67%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY45540.1\|1793939_1794890_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45541.1\|1794988_1797589_-	DUF3394 domain-containing protein	NA	NA	NA	NA
AZY45542.1\|1797695_1798700_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY45543.1\|1798808_1800149_-	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	8.8e-18	22.8
AZY45544.1\|1800189_1801218_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
AZY45545.1\|1801413_1801959_+	MarR family transcriptional regulator	NA	NA	NA	NA
AZY45546.1\|1801955_1802516_+	diaminobutyrate acetyltransferase	NA	NA	NA	NA
AZY45547.1\|1802614_1803565_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45548.1\|1803602_1804190_+	DUF1949 domain-containing protein	A0A1X9I5T8	Streptococcus_phage	4.7e-16	35.8
AZY45549.1\|1804207_1804591_-	thioredoxin	V9SJ74	Achromobacter_phage	8.1e-09	25.8
AZY45550.1\|1805950_1807243_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	1.7e-66	36.0
AZY45551.1\|1807377_1808418_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	6.1e-91	51.3
AZY45552.1\|1808515_1809532_-\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AZY45553.1\|1809799_1810447_-	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AZY45554.1\|1810572_1811331_+	5'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.4e-68	51.2
AZY47526.1\|1811405_1812095_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	4.2e-32	46.9
AZY45555.1\|1812112_1812997_+	peptidase	A0A292GJG6	Xanthomonas_phage	4.6e-15	49.5
AZY45556.1\|1812993_1813773_+	3'-5' exonuclease	NA	NA	NA	NA
AZY45557.1\|1813799_1814477_+	hypothetical protein	NA	NA	NA	NA
AZY47527.1\|1814765_1815518_+	hypothetical protein	NA	NA	NA	NA
AZY45558.1\|1815636_1817037_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	7.3e-31	26.5
AZY45559.1\|1817060_1817459_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
AZY45560.1\|1817634_1817835_+	copper chaperone	NA	NA	NA	NA
AZY45561.1\|1817973_1818702_+	glutaredoxin	A0A1D8KSL1	Synechococcus_phage	9.6e-43	56.8
AZY45562.1\|1818835_1820251_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA
AZY45563.1\|1820254_1821118_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA
AZY45564.1\|1821130_1821880_-	glycerophosphodiester phosphodiesterase	A0A2H4PGQ5	Escherichia_phage	1.5e-14	27.8
AZY45565.1\|1822062_1824078_+	peptidylprolyl isomerase	NA	NA	NA	NA
AZY47528.1\|1824059_1824608_-	arylesterase	NA	NA	NA	NA
AZY45566.1\|1824684_1825404_+	ABC transporter	G9BWD6	Planktothrix_phage	1.4e-22	36.6
AZY45567.1\|1825502_1826453_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45568.1\|1826551_1827502_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45569.1\|1827650_1827989_-	phospholipid-binding protein	NA	NA	NA	NA
AZY45570.1\|1828046_1828208_-	DUF1328 domain-containing protein	NA	NA	NA	NA
AZY45571.1\|1828239_1828440_-	CsbD family protein	NA	NA	NA	NA
AZY45572.1\|1828705_1831279_-	cyanophycin synthetase	NA	NA	NA	NA
AZY45573.1\|1831349_1833923_-	cyanophycin synthetase	NA	NA	NA	NA
AZY45574.1\|1836449_1836938_+	DUF1854 domain-containing protein	NA	NA	NA	NA
AZY47529.1\|1837029_1838181_-	N-acetyltransferase	NA	NA	NA	NA
AZY45575.1\|1838234_1839056_+	DUF455 domain-containing protein	NA	NA	NA	NA
AZY45576.1\|1839094_1840324_+	lytic murein transglycosylase	NA	NA	NA	NA
AZY45577.1\|1840452_1840893_+	DUF937 domain-containing protein	NA	NA	NA	NA
AZY45578.1\|1840837_1841017_+	hypothetical protein	NA	NA	NA	NA
AZY45579.1\|1841003_1841954_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_14

1845347 : 1906552

Lake_Baikal_phage(21.43%)

transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY45584.1\|1845347_1848209_-\|tRNA	isoleucine--tRNA ligase	A0A1V0SJ93	Klosneuvirus	1.0e-71	25.5
AZY45585.1\|1848198_1849164_-	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA
AZY45586.1\|1849223_1851218_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.4e-21	33.3
AZY45587.1\|1851316_1852267_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45588.1\|1852263_1852638_-	hypothetical protein	NA	NA	NA	NA
AZY45589.1\|1852899_1854108_+	acyl-CoA desaturase	NA	NA	NA	NA
AZY45590.1\|1854104_1856405_+	DNA helicase II	A7KV33	Bacillus_phage	9.9e-110	35.9
AZY45591.1\|1856457_1859070_-	TonB-dependent receptor	NA	NA	NA	NA
AZY45592.1\|1859429_1861355_-	ABC transporter ATP-binding protein	A0A2K9L0W2	Tupanvirus	1.1e-66	31.8
AZY45593.1\|1861351_1862248_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
AZY45594.1\|1862254_1863394_-	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA
AZY45595.1\|1863393_1864215_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
AZY45596.1\|1865785_1866115_-	DUF4148 domain-containing protein	NA	NA	NA	NA
AZY45597.1\|1866497_1867754_+	autotransporter Phg	NA	NA	NA	NA
AZY45598.1\|1867828_1868110_+	hypothetical protein	NA	NA	NA	NA
AZY45599.1\|1868151_1868472_+	hypothetical protein	NA	NA	NA	NA
AZY45600.1\|1868778_1868982_+	cold-shock protein CspA	A0A2H4N7Y6	Lake_Baikal_phage	1.6e-16	62.1
AZY45601.1\|1869065_1869632_+	DUF924 domain-containing protein	NA	NA	NA	NA
AZY45602.1\|1869977_1870178_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	7.4e-14	64.4
AZY45603.1\|1870289_1870868_-	TIGR00645 family protein	K4K6D8	Caulobacter_phage	1.0e-23	33.7
AZY45604.1\|1871046_1872357_+	trigger factor	NA	NA	NA	NA
AZY45605.1\|1872359_1873013_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	6.8e-56	57.5
AZY45606.1\|1873117_1874422_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.2e-129	53.8
AZY45607.1\|1874610_1877064_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.5e-220	52.0
AZY45608.1\|1877187_1878138_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY45609.1\|1878365_1879589_+	CoA transferase	NA	NA	NA	NA
AZY45610.1\|1879654_1880626_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY45611.1\|1880638_1881094_+	MaoC family dehydratase	NA	NA	NA	NA
AZY45612.1\|1881107_1881911_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AZY45613.1\|1881907_1882339_+	hypothetical protein	NA	NA	NA	NA
AZY45614.1\|1882335_1883493_+	thiolase	NA	NA	NA	NA
AZY45615.1\|1883514_1884291_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AZY45616.1\|1886455_1887172_+	3-oxoadipate CoA-transferase	NA	NA	NA	NA
AZY45617.1\|1887164_1887806_+	CoA transferase subunit B	NA	NA	NA	NA
AZY45618.1\|1887840_1888572_+	hypothetical protein	NA	NA	NA	NA
AZY45619.1\|1888589_1888802_+	hypothetical protein	NA	NA	NA	NA
AZY45620.1\|1889372_1890323_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45621.1\|1891880_1892609_-	transcriptional repressor LexA	A0A2H4JG58	uncultured_Caudovirales_phage	2.8e-10	50.7
AZY45622.1\|1892659_1893862_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
AZY45623.1\|1893939_1895976_+	UvrABC system protein B	NA	NA	NA	NA
AZY45624.1\|1896228_1896720_+	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA
AZY45625.1\|1896935_1897448_+	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA
AZY45626.1\|1897465_1898677_+	IscS subfamily cysteine desulfurase	NA	NA	NA	NA
AZY45627.1\|1898714_1899125_+	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	7.5e-53	79.0
AZY45628.1\|1899126_1899450_+	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	6.8e-25	52.8
AZY45629.1\|1899452_1899965_+	co-chaperone protein HscB	NA	NA	NA	NA
AZY45630.1\|1900094_1901957_+	chaperone protein HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	3.0e-101	42.4
AZY45631.1\|1901966_1902308_+	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA
AZY45632.1\|1902307_1902502_+	Fe-S assembly protein IscX	NA	NA	NA	NA
AZY45633.1\|1902626_1903520_+	methylglyoxal synthase	NA	NA	NA	NA
AZY45634.1\|1903516_1904467_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45635.1\|1904591_1905401_-	enoyl-CoA hydratase	NA	NA	NA	NA
AZY45636.1\|1905601_1906552_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_15

1934335 : 1975026

Klosneuvirus(25.0%)

transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY45656.1\|1934335_1936960_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.7e-81	39.4
AZY45657.1\|1936946_1937201_+	sulfurtransferase TusA family protein	NA	NA	NA	NA
AZY45658.1\|1937267_1937849_-	hypothetical protein	NA	NA	NA	NA
AZY45659.1\|1938152_1938413_+	30S ribosomal protein S16	NA	NA	NA	NA
AZY45660.1\|1938578_1939202_+	ribosome maturation factor RimM	NA	NA	NA	NA
AZY45661.1\|1939201_1939975_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AZY45662.1\|1939971_1941180_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
AZY45663.1\|1941205_1941679_-	RidA family protein	NA	NA	NA	NA
AZY45664.1\|1941752_1942703_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45665.1\|1942801_1943752_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45666.1\|1943850_1945200_-	two-component sensor histidine kinase	NA	NA	NA	NA
AZY45667.1\|1945965_1946721_+	MipA/OmpV family protein	NA	NA	NA	NA
AZY45668.1\|1946813_1949696_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	3.7e-138	37.1
AZY45669.1\|1950018_1950444_+	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	2.1e-21	43.2
AZY45670.1\|1950471_1951620_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA
AZY45671.1\|1951616_1952123_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AZY45672.1\|1952129_1953425_+	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)	NA	NA	NA	NA
AZY45673.1\|1953465_1954770_+\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
AZY45674.1\|1954771_1955410_+	hypothetical protein	NA	NA	NA	NA
AZY45675.1\|1955412_1956573_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA
AZY45676.1\|1956599_1957955_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA
AZY45677.1\|1957958_1959029_+	histidinol-phosphate aminotransferase 1	A0A1X6WGT4	Pacmanvirus	2.5e-15	25.7
AZY45678.1\|1959167_1959404_+	RNA-binding protein Hfq	NA	NA	NA	NA
AZY45679.1\|1959491_1960598_+	GTPase HflX	NA	NA	NA	NA
AZY45680.1\|1960563_1961868_+\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
AZY45681.1\|1961886_1962786_+\|protease	protease modulator HflC	NA	NA	NA	NA
AZY45682.1\|1962969_1964127_+	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA
AZY45683.1\|1964191_1965499_+	adenylosuccinate synthetase	A0A160ER07	Powai_lake_megavirus	3.0e-63	33.5
AZY45684.1\|1965612_1966152_+	phosphoribosyltransferase	NA	NA	NA	NA
AZY45685.1\|1966429_1966642_+	30S ribosomal protein S21	NA	NA	NA	NA
AZY45686.1\|1966661_1968692_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.0e-65	41.9
AZY47531.1\|1969491_1971660_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	3.1e-36	30.1
AZY45687.1\|1972069_1972369_-	hypothetical protein	NA	NA	NA	NA
AZY45688.1\|1972653_1973067_+	transcriptional regulator	A0A222YXG1	Escherichia_phage	3.8e-36	59.0
AZY45689.1\|1973026_1973977_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45690.1\|1974075_1975026_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_16

1986230 : 2035626

Klosneuvirus(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY45704.1\|1986230_1987181_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45705.1\|1987177_1988452_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	9.6e-14	28.9
AZY45706.1\|1988549_1989749_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA
AZY45707.1\|1989745_1990399_+	alpha/beta hydrolase	NA	NA	NA	NA
AZY45708.1\|1990395_1991832_+	dethiobiotin synthase	NA	NA	NA	NA
AZY45709.1\|1991819_1992179_+	CidA/LrgA family protein	NA	NA	NA	NA
AZY45710.1\|1993151_1994102_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45711.1\|1995147_1997013_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
AZY47533.1\|1997270_1998791_+	aldehyde dehydrogenase	NA	NA	NA	NA
AZY45712.1\|1998878_1999529_-	flavodoxin family protein	NA	NA	NA	NA
AZY45713.1\|2000477_2001773_+	DUF445 domain-containing protein	NA	NA	NA	NA
AZY45714.1\|2001794_2002679_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY47534.1\|2002777_2003653_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
AZY45715.1\|2003642_2003999_-	DUF1428 domain-containing protein	NA	NA	NA	NA
AZY45716.1\|2004072_2005104_+	AraC family transcriptional regulator	NA	NA	NA	NA
AZY45717.1\|2005233_2005413_-	DUF3008 domain-containing protein	NA	NA	NA	NA
AZY45718.1\|2005510_2006035_+	DUF302 domain-containing protein	NA	NA	NA	NA
AZY45719.1\|2006045_2006882_-	alpha/beta hydrolase	NA	NA	NA	NA
AZY45720.1\|2006994_2007366_+	transcriptional regulator	NA	NA	NA	NA
AZY45721.1\|2007362_2007914_+	ATPase	NA	NA	NA	NA
AZY45722.1\|2007929_2009621_-	sodium-independent anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	5.0e-42	27.3
AZY45723.1\|2009669_2010350_-	GntR family transcriptional regulator	NA	NA	NA	NA
AZY45724.1\|2010597_2011062_-	hypothetical protein	NA	NA	NA	NA
AZY45725.1\|2011231_2012161_+	ZIP family metal transporter	NA	NA	NA	NA
AZY45726.1\|2012173_2012821_-	hypothetical protein	NA	NA	NA	NA
AZY45727.1\|2012894_2014712_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.3e-37	27.4
AZY45728.1\|2014795_2015746_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45729.1\|2016398_2017349_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45730.1\|2017367_2017715_-	GFA family protein	NA	NA	NA	NA
AZY45731.1\|2017743_2019183_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	7.4e-55	37.4
AZY45732.1\|2019201_2019597_-	VOC family protein	NA	NA	NA	NA
AZY45733.1\|2019771_2020380_+	peptidase S16	NA	NA	NA	NA
AZY45734.1\|2020392_2021211_+	hypothetical protein	A0A1B1INV8	uncultured_Mediterranean_phage	2.3e-16	28.8
AZY45735.1\|2021162_2022137_-	AraC family transcriptional regulator	NA	NA	NA	NA
AZY45736.1\|2022165_2023227_-	hypothetical protein	NA	NA	NA	NA
AZY45737.1\|2023223_2025440_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA
AZY45738.1\|2025453_2025912_-	(2Fe-2S)-binding protein	NA	NA	NA	NA
AZY45739.1\|2026069_2026414_-	hypothetical protein	NA	NA	NA	NA
AZY45740.1\|2026570_2027476_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY47535.1\|2027562_2028576_+	flavin-nucleotide-binding protein	NA	NA	NA	NA
AZY45741.1\|2030555_2031572_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY45742.1\|2031714_2033067_-	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	2.9e-45	27.6
AZY45743.1\|2033241_2033538_+	hypothetical protein	NA	NA	NA	NA
AZY45744.1\|2034675_2035626_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_17

2047122 : 2111491

Vibrio_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY45758.1\|2047122_2048073_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45759.1\|2048059_2048251_-	hypothetical protein	NA	NA	NA	NA
AZY45760.1\|2048294_2049245_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45761.1\|2049343_2050309_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY45762.1\|2050446_2051346_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY45763.1\|2053940_2055428_+	hypothetical protein	NA	NA	NA	NA
AZY45764.1\|2055438_2056635_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA
AZY45765.1\|2056707_2058027_+	phenylacetate--CoA ligase family protein	NA	NA	NA	NA
AZY45766.1\|2058023_2058899_+	alpha/beta hydrolase	NA	NA	NA	NA
AZY45767.1\|2058929_2060099_-	CoA transferase	NA	NA	NA	NA
AZY45768.1\|2060095_2060410_-	ferredoxin	NA	NA	NA	NA
AZY45769.1\|2060431_2061154_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZY45770.1\|2061153_2061972_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AZY45771.1\|2061976_2062504_-	ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA
AZY45772.1\|2062509_2063775_-	ring-hydroxylating oxygenase subunit alpha	NA	NA	NA	NA
AZY45773.1\|2064124_2065264_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY45774.1\|2065341_2066214_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY45775.1\|2067084_2068035_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45776.1\|2067994_2068630_-	hypothetical protein	NA	NA	NA	NA
AZY45777.1\|2068989_2070312_-	isocitrate lyase	NA	NA	NA	NA
AZY47537.1\|2070540_2071452_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	A0A2I7SAX1	Vibrio_phage	5.9e-42	37.6
AZY45778.1\|2072876_2073449_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
AZY45779.1\|2073488_2075318_-	UvrABC system protein C	NA	NA	NA	NA
AZY45780.1\|2075280_2076339_-	beta-hexosaminidase	NA	NA	NA	NA
AZY45781.1\|2076376_2076838_-	holo-ACP synthase	NA	NA	NA	NA
AZY45782.1\|2076922_2077669_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
AZY45783.1\|2079159_2082390_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AZY45784.1\|2082456_2083788_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AZY45785.1\|2084040_2084415_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AZY45786.1\|2084517_2085696_-	hypothetical protein	NA	NA	NA	NA
AZY45787.1\|2085706_2086297_-	DUF4136 domain-containing protein	NA	NA	NA	NA
AZY47538.1\|2086407_2087214_+	molybdenum-dependent transcriptional regulator	NA	NA	NA	NA
AZY45788.1\|2087239_2088034_-	ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	5.1e-05	25.7
AZY45789.1\|2089034_2090009_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY45790.1\|2090167_2090680_-	superoxide dismutase [Cu-Zn] SodC1	Q9MC02	Salmonella_phage	1.8e-43	52.3
AZY45791.1\|2090836_2091808_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY45792.1\|2093552_2094359_-	enoyl-CoA hydratase	NA	NA	NA	NA
AZY47539.1\|2094355_2095492_-	malonyl-CoA decarboxylase	NA	NA	NA	NA
AZY45793.1\|2095607_2096372_-	GntR family transcriptional regulator	NA	NA	NA	NA
AZY45794.1\|2096485_2097256_-	spermidine synthase	NA	NA	NA	NA
AZY45795.1\|2097340_2098552_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA
AZY45796.1\|2098600_2098975_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA
AZY45797.1\|2099075_2100338_-	glycine betaine/L-proline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.8e-28	36.6
AZY45798.1\|2100334_2101192_-	ABC transporter permease	NA	NA	NA	NA
AZY45799.1\|2101364_2102366_-	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY45800.1\|2102817_2103768_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45801.1\|2105283_2106483_+	Bcr/CflA family drug resistance efflux transporter	NA	NA	NA	NA
AZY45802.1\|2106851_2107088_+	50S ribosomal protein L28	NA	NA	NA	NA
AZY45803.1\|2107151_2107319_+	50S ribosomal protein L33	NA	NA	NA	NA
AZY45804.1\|2107432_2109328_-	STAS domain-containing protein	A0A2H4J153	uncultured_Caudovirales_phage	2.3e-19	27.5
AZY45805.1\|2109491_2110442_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45806.1\|2110540_2111491_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_18

2297959 : 2359307

Yellowstone_lake_phycodnavirus(12.5%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY45942.1\|2297959_2298910_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45943.1\|2299026_2299746_+	FadR family transcriptional regulator	NA	NA	NA	NA
AZY45944.1\|2299918_2300905_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY45945.1\|2300905_2301388_+	TRAP transporter small permease	NA	NA	NA	NA
AZY45946.1\|2301391_2302675_+	TRAP transporter large permease	NA	NA	NA	NA
AZY45947.1\|2302671_2303610_+	CoA ester lyase	NA	NA	NA	NA
AZY45948.1\|2303606_2305316_+	thiamine pyrophosphate-binding protein	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	5.9e-35	27.3
AZY45949.1\|2305325_2306573_+	Zn-dependent hydrolase	NA	NA	NA	NA
AZY47549.1\|2308183_2309473_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
AZY45950.1\|2310610_2311384_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.1e-31	37.7
AZY47550.1\|2312045_2312789_-	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY45951.1\|2312863_2313604_-	IclR family transcriptional regulator	NA	NA	NA	NA
AZY45952.1\|2313799_2314636_-	hypothetical protein	NA	NA	NA	NA
AZY45953.1\|2314686_2315457_-	TatD family deoxyribonuclease	NA	NA	NA	NA
AZY45954.1\|2315506_2316559_-	DNA polymerase III subunit delta'	NA	NA	NA	NA
AZY45955.1\|2316555_2317182_-	thymidylate kinase	A0A1L2BX49	Bacteriophage	1.6e-22	35.1
AZY45956.1\|2317178_2318225_-	endolytic transglycosylase MltG	NA	NA	NA	NA
AZY45957.1\|2318391_2319408_+	folate-binding protein	NA	NA	NA	NA
AZY45958.1\|2319506_2320457_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45959.1\|2320480_2320945_-	GatB/YqeY domain-containing protein	A0A0K2FLI9	Brevibacillus_phage	3.9e-05	32.4
AZY45960.1\|2321091_2322300_+	flavohemoprotein	NA	NA	NA	NA
AZY45961.1\|2322310_2322781_+	DNA-binding protein	NA	NA	NA	NA
AZY45962.1\|2322899_2324189_+	D-amino acid dehydrogenase	NA	NA	NA	NA
AZY45963.1\|2326929_2327880_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45964.1\|2328864_2329638_-	ABC transporter permease	NA	NA	NA	NA
AZY45965.1\|2329634_2330633_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY45966.1\|2330717_2331494_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-30	34.2
AZY45967.1\|2331649_2333317_-	ABC-F family ATPase	A0A1V0SKJ1	Klosneuvirus	1.6e-53	28.9
AZY45968.1\|2333634_2334759_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY45969.1\|2334885_2335509_+	hypothetical protein	NA	NA	NA	NA
AZY45970.1\|2335505_2337407_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AZY45971.1\|2337455_2338250_+	enoyl-CoA hydratase	NA	NA	NA	NA
AZY45972.1\|2338262_2339264_-	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA
AZY45973.1\|2339260_2339767_-\|tRNA	tRNA adenosine(34) deaminase TadA	S4VYT2	Pandoravirus	3.4e-07	38.4
AZY45974.1\|2339759_2340608_-	hydrolase	NA	NA	NA	NA
AZY45975.1\|2340705_2341248_-	hypothetical protein	NA	NA	NA	NA
AZY45976.1\|2341291_2342242_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45977.1\|2342397_2342724_-	cation:proton antiporter	NA	NA	NA	NA
AZY45978.1\|2342720_2343005_-	K+/H+ antiporter subunit F	NA	NA	NA	NA
AZY45979.1\|2343001_2343481_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA
AZY45980.1\|2343477_2345106_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA
AZY45981.1\|2345102_2345447_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA
AZY45982.1\|2345446_2348380_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA
AZY45983.1\|2349538_2350489_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY45984.1\|2350587_2350884_-	hypothetical protein	NA	NA	NA	NA
AZY45985.1\|2350990_2351908_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY45986.1\|2351912_2352626_-	NAD-dependent oxidoreductase	NA	NA	NA	NA
AZY45987.1\|2352639_2353611_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY45988.1\|2355330_2355711_+	ArsR family transcriptional regulator	NA	NA	NA	NA
AZY45989.1\|2355714_2356902_+	MFS transporter	NA	NA	NA	NA
AZY45990.1\|2357340_2358063_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	1.3e-87	68.2
AZY45991.1\|2358356_2359307_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_19

2380098 : 2451252

Tetraselmis_virus(10.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY46006.1\|2380098_2381049_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46007.1\|2381601_2383227_-	arylsulfatase	A0A2P0VMN7	Tetraselmis_virus	2.0e-149	52.2
AZY47555.1\|2383276_2384311_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA
AZY46008.1\|2384313_2385660_-	hypothetical protein	NA	NA	NA	NA
AZY47556.1\|2385656_2387171_-	VWA domain-containing protein	NA	NA	NA	NA
AZY46009.1\|2387161_2388172_-	hypothetical protein	NA	NA	NA	NA
AZY46010.1\|2388645_2389587_-	DUF58 domain-containing protein	NA	NA	NA	NA
AZY46011.1\|2389595_2390564_-	AAA family ATPase	NA	NA	NA	NA
AZY46012.1\|2392103_2393072_+	transporter	NA	NA	NA	NA
AZY46013.1\|2393249_2394239_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY46014.1\|2394285_2395044_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZY46015.1\|2395233_2395971_+	hypothetical protein	A0A0S4KZH7	Pseudomonas_phage	4.1e-41	46.6
AZY46016.1\|2396069_2397020_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46017.1\|2397204_2397987_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	2.0e-09	25.8
AZY46018.1\|2397980_2398682_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
AZY46019.1\|2398921_2399524_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY46020.1\|2400850_2401801_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46021.1\|2401797_2403354_-	LTA synthase family protein	NA	NA	NA	NA
AZY46022.1\|2403346_2404120_-	oxidoreductase	NA	NA	NA	NA
AZY46023.1\|2404178_2405129_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46024.1\|2405210_2406386_-	capsule biosynthesis protein CapA	NA	NA	NA	NA
AZY46025.1\|2406399_2408457_-	capsular polysaccharide export protein	NA	NA	NA	NA
AZY46026.1\|2408453_2409479_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	A0A2K9L4U8	Tupanvirus	4.7e-72	44.2
AZY46027.1\|2409490_2410780_-	nucleotide sugar dehydrogenase	NA	NA	NA	NA
AZY46028.1\|2410802_2411900_-	capsular polysaccharide export protein	NA	NA	NA	NA
AZY46029.1\|2411896_2412787_-	capsular biosynthesis protein	NA	NA	NA	NA
AZY46030.1\|2412783_2414868_-	Vi polysaccharide biosynthesis protein TviE	NA	NA	NA	NA
AZY46031.1\|2414899_2416069_-	capsule biosynthesis protein	NA	NA	NA	NA
AZY46032.1\|2416110_2416851_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
AZY46033.1\|2416850_2417621_-	polyhydroxyalkanoate biosynthesis repressor PhaR	NA	NA	NA	NA
AZY46034.1\|2418476_2419262_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	1.1e-12	32.0
AZY46035.1\|2419288_2421373_+	hypothetical protein	NA	NA	NA	NA
AZY46036.1\|2421540_2423496_+	capsular biosynthesis protein	NA	NA	NA	NA
AZY47557.1\|2423819_2424320_-	DNA starvation/stationary phase protection protein	W5S6G8	Pithovirus	6.4e-14	35.5
AZY46037.1\|2424418_2425945_-	methylmalonate-semialdehyde dehydrogenase (CoA acylating)	NA	NA	NA	NA
AZY47558.1\|2426082_2426970_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY46038.1\|2426984_2427938_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	7.2e-14	26.5
AZY46039.1\|2427989_2430080_-	DNA helicase RecG	NA	NA	NA	NA
AZY46040.1\|2430095_2430482_-	reactive intermediate/imine deaminase	NA	NA	NA	NA
AZY46041.1\|2433175_2433979_-	2,5-didehydrogluconate reductase DkgB	A0A2H4PQR8	Staphylococcus_phage	2.0e-33	32.4
AZY46042.1\|2435272_2436175_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY46043.1\|2436239_2437016_-	ferredoxin--NADP reductase	NA	NA	NA	NA
AZY46044.1\|2437337_2438387_+	iron ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY46045.1\|2438510_2440181_+	iron ABC transporter permease	NA	NA	NA	NA
AZY46046.1\|2440185_2440980_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.3e-16	29.4
AZY46047.1\|2441078_2442029_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46048.1\|2442048_2442954_-	pirin family protein	NA	NA	NA	NA
AZY46049.1\|2443031_2443730_-	pirin family protein	NA	NA	NA	NA
AZY47559.1\|2443889_2444834_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY46050.1\|2444843_2446334_-	nitrogen regulation protein NR(I)	NA	NA	NA	NA
AZY46051.1\|2446330_2447398_-	PAS domain-containing sensor histidine kinase	Q8QKV7	Ectocarpus_siliculosus_virus	1.1e-05	23.5
AZY46052.1\|2447461_2448874_-	type I glutamate--ammonia ligase	NA	NA	NA	NA
AZY46053.1\|2449059_2450280_-	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA
AZY46054.1\|2450301_2451252_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_20

2492193 : 2554040

Planktothrix_phage(14.29%)

transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY46093.1\|2492193_2493144_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46094.1\|2493242_2493851_-	recombination protein RecR	NA	NA	NA	NA
AZY46095.1\|2493901_2494228_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
AZY46096.1\|2494274_2496500_-	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	1.2e-43	38.5
AZY46097.1\|2497167_2500572_-	nuclease	NA	NA	NA	NA
AZY46098.1\|2500584_2503245_-	hypothetical protein	NA	NA	NA	NA
AZY46099.1\|2503448_2504651_-	MFS transporter	NA	NA	NA	NA
AZY46100.1\|2505337_2506450_+	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA
AZY46101.1\|2506456_2507407_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46102.1\|2507505_2507907_-	aryl-sulfate sulfotransferase	NA	NA	NA	NA
AZY46103.1\|2507979_2508558_-\|protease	protease	NA	NA	NA	NA
AZY47562.1\|2508675_2509164_-\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
AZY46104.1\|2509177_2510110_-	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	2.3e-25	29.5
AZY46105.1\|2510147_2511035_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	3.4e-18	28.7
AZY46106.1\|2511192_2512887_+	thiamine pyrophosphate-binding protein	E5ERI2	Ostreococcus_lucimarinus_virus	3.8e-26	24.5
AZY46107.1\|2512903_2514160_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AZY46108.1\|2514297_2514843_-	acyl dehydratase	NA	NA	NA	NA
AZY46109.1\|2514874_2516434_-	acetolactate synthase large subunit	NA	NA	NA	NA
AZY46110.1\|2516562_2517315_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.8e-29	39.7
AZY46111.1\|2517336_2518029_-	amino acid ABC transporter permease	NA	NA	NA	NA
AZY46112.1\|2518051_2518843_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY46113.1\|2518869_2519775_-	agmatinase	NA	NA	NA	NA
AZY46114.1\|2519967_2520804_-	IclR family transcriptional regulator	NA	NA	NA	NA
AZY46115.1\|2520895_2521918_-	amino acid ABC transporter substrate-binding protein	A0A1B1IT51	uncultured_Mediterranean_phage	1.6e-67	40.7
AZY46116.1\|2522054_2523107_-	threonylcarbamoyl-AMP synthase	S4VW33	Pandoravirus	4.8e-35	37.8
AZY46117.1\|2523111_2524302_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
AZY46118.1\|2524304_2524784_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	6.5e-16	42.5
AZY46119.1\|2524969_2525449_-	disulfide bond formation protein B	NA	NA	NA	NA
AZY46120.1\|2525456_2525693_-	hypothetical protein	NA	NA	NA	NA
AZY46121.1\|2525712_2526114_-	type II toxin-antitoxin system MqsA family antitoxin	NA	NA	NA	NA
AZY46122.1\|2526116_2526368_-	type II toxin-antitoxin system MqsR family toxin	NA	NA	NA	NA
AZY46123.1\|2526422_2527304_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	1.8e-51	36.1
AZY46124.1\|2527528_2527975_+	GFA family protein	NA	NA	NA	NA
AZY46125.1\|2528059_2529124_-	fructose-bisphosphate aldolase class II	NA	NA	NA	NA
AZY46126.1\|2529260_2529842_-	MOSC domain-containing protein	NA	NA	NA	NA
AZY46127.1\|2530076_2531207_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AZY46128.1\|2531384_2532611_+	acetamidase/formamidase family protein	A0A1V0S8X7	Catovirus	5.2e-134	58.8
AZY46129.1\|2532669_2533185_+	transporter	NA	NA	NA	NA
AZY46130.1\|2533207_2533534_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
AZY46131.1\|2533567_2534758_+	formate dehydrogenase	NA	NA	NA	NA
AZY46132.1\|2534831_2535236_+	GFA family protein	NA	NA	NA	NA
AZY46133.1\|2535452_2536403_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46134.1\|2536501_2537272_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.3e-29	39.5
AZY46135.1\|2537268_2537940_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA
AZY46136.1\|2537936_2538578_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA
AZY46137.1\|2538590_2539511_-	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA
AZY46138.1\|2539671_2540832_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY46139.1\|2540873_2541824_-	ornithine cyclodeaminase	NA	NA	NA	NA
AZY46140.1\|2542422_2542647_+	hypothetical protein	NA	NA	NA	NA
AZY46141.1\|2542811_2544506_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
AZY46142.1\|2544627_2544897_-	HPr family phosphocarrier protein	NA	NA	NA	NA
AZY46143.1\|2545012_2545411_-	PTS mannose transporter subunit IIA	NA	NA	NA	NA
AZY46144.1\|2545421_2546378_-	glutathione synthetase	NA	NA	NA	NA
AZY46145.1\|2546514_2547060_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	9.1e-14	29.9
AZY46146.1\|2547080_2549030_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	4.1e-125	36.0
AZY46147.1\|2549417_2550194_+	DNA-binding response regulator	NA	NA	NA	NA
AZY46148.1\|2550199_2550592_+	hypothetical protein	NA	NA	NA	NA
AZY46149.1\|2551013_2551964_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46150.1\|2551960_2553058_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	3.5e-20	37.3
AZY46151.1\|2553089_2554040_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_21

2684917 : 2725586

Salmonella_phage(33.33%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY46259.1\|2684917_2685868_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46260.1\|2685978_2686161_+	hypothetical protein	NA	NA	NA	NA
AZY46261.1\|2686260_2686857_-	lipoprotein	NA	NA	NA	NA
AZY46262.1\|2687040_2688132_+	hypothetical protein	NA	NA	NA	NA
AZY46263.1\|2688631_2689042_-	MerR family transcriptional regulator	NA	NA	NA	NA
AZY46264.1\|2689100_2689442_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	2.8e-13	42.2
AZY46265.1\|2689447_2691865_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
AZY46266.1\|2691877_2692900_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	1.0e-26	38.6
AZY46267.1\|2692974_2693334_-	50S ribosomal protein L20	NA	NA	NA	NA
AZY46268.1\|2693349_2693547_-	50S ribosomal protein L35	NA	NA	NA	NA
AZY46269.1\|2693882_2694833_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46270.1\|2694819_2695008_-	hypothetical protein	NA	NA	NA	NA
AZY46271.1\|2695027_2695477_+	dUTP diphosphatase	S4TNT3	Salmonella_phage	3.7e-45	67.2
AZY46272.1\|2695473_2696424_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46273.1\|2696534_2697983_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
AZY46274.1\|2698097_2698379_-	hypothetical protein	NA	NA	NA	NA
AZY46275.1\|2698482_2699433_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46276.1\|2699677_2700391_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AZY46277.1\|2700513_2700741_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AZY46278.1\|2701035_2701674_-	DedA family protein	NA	NA	NA	NA
AZY46279.1\|2701746_2702817_+	metal-dependent hydrolase	NA	NA	NA	NA
AZY46280.1\|2702813_2703764_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46281.1\|2704179_2704704_-	DNA-binding protein	J9Q7G7	Salmonella_phage	6.5e-09	32.9
AZY46282.1\|2704707_2704977_-	hypothetical protein	NA	NA	NA	NA
AZY46283.1\|2705175_2706237_-	LacI family transcriptional regulator	NA	NA	NA	NA
AZY46284.1\|2706320_2707955_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.9e-15	31.1
AZY46285.1\|2707956_2708760_-	ABC transporter permease	NA	NA	NA	NA
AZY46286.1\|2708788_2709748_-	ABC transporter permease	NA	NA	NA	NA
AZY46287.1\|2709751_2711266_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY46288.1\|2711302_2712307_-	peptidase M20	NA	NA	NA	NA
AZY46289.1\|2712738_2713209_-	DUF1801 domain-containing protein	NA	NA	NA	NA
AZY46290.1\|2713244_2713856_-	LysE family translocator	NA	NA	NA	NA
AZY46291.1\|2713886_2714510_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA
AZY46292.1\|2714590_2716123_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
AZY46293.1\|2716157_2717399_-	MFS transporter	NA	NA	NA	NA
AZY46294.1\|2717442_2718474_-	alcohol dehydrogenase	A0A2K9L339	Tupanvirus	1.8e-26	27.8
AZY46295.1\|2718470_2719640_-	amine oxidase	NA	NA	NA	NA
AZY46296.1\|2719633_2720314_-	anti-sigma factor	NA	NA	NA	NA
AZY46297.1\|2720475_2721318_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY46298.1\|2721480_2722452_-	AraC family transcriptional regulator	NA	NA	NA	NA
AZY46299.1\|2722623_2723502_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
AZY46300.1\|2723524_2724595_-	FUSC family protein	NA	NA	NA	NA
AZY46301.1\|2724635_2725586_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_22

2781051 : 2853921

Moraxella_phage(16.67%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY46344.1\|2781051_2781468_-\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
AZY46345.1\|2781578_2782211_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA
AZY46346.1\|2782239_2782683_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA
AZY46347.1\|2782704_2783796_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY46348.1\|2783850_2784651_-	aldolase	NA	NA	NA	NA
AZY46349.1\|2784786_2785407_+	XRE family transcriptional regulator	NA	NA	NA	NA
AZY46350.1\|2785546_2786020_+	MarR family transcriptional regulator	NA	NA	NA	NA
AZY46351.1\|2787159_2788110_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46352.1\|2788106_2795768_-	adhesin	A0A0R6PJK4	Moraxella_phage	7.3e-24	30.9
AZY46353.1\|2796008_2800055_-	phosphoribosylformylglycinamidine synthase	A9YX36	Burkholderia_phage	6.3e-160	67.4
AZY46354.1\|2800367_2800949_+	TRAP transporter small permease	NA	NA	NA	NA
AZY46355.1\|2800945_2802244_+	TRAP transporter large permease	NA	NA	NA	NA
AZY46356.1\|2802323_2803352_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AZY46357.1\|2803275_2803626_+	hypothetical protein	NA	NA	NA	NA
AZY46358.1\|2803612_2804563_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46359.1\|2804559_2805510_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46360.1\|2805826_2806432_+	fimbrial protein FimX	NA	NA	NA	NA
AZY46361.1\|2806485_2807799_-	phenylacetate--CoA ligase	NA	NA	NA	NA
AZY46362.1\|2807873_2808344_-	phenylacetic acid degradation protein PaaD	NA	NA	NA	NA
AZY46363.1\|2808343_2809132_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA
AZY46364.1\|2809142_2810795_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA
AZY46365.1\|2810882_2811833_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY47575.1\|2812994_2813501_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA
AZY46366.1\|2813497_2814262_-	phenylacetate-CoA oxygenase subunit PaaI	NA	NA	NA	NA
AZY46367.1\|2814277_2814562_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA
AZY46368.1\|2814626_2815616_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA
AZY46369.1\|2815787_2816717_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA
AZY46370.1\|2816688_2817375_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA
AZY46371.1\|2817408_2817954_-	oligoribonuclease	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	2.1e-26	37.7
AZY46372.1\|2817998_2819264_+	peptidase M48	NA	NA	NA	NA
AZY46373.1\|2819260_2820163_+	ribosome biogenesis GTPase	NA	NA	NA	NA
AZY46374.1\|2821344_2822289_-	ABC transporter permease	NA	NA	NA	NA
AZY46375.1\|2822383_2823901_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY46376.1\|2823942_2825571_-	gamma-glutamyltransferase	NA	NA	NA	NA
AZY46377.1\|2825678_2826560_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY46378.1\|2829672_2830047_+	endonuclease	F4YXR7	Roseobacter_phage	2.1e-25	54.4
AZY46379.1\|2830071_2830410_-	P-II family nitrogen regulator	NA	NA	NA	NA
AZY46380.1\|2830453_2832088_-	NAD+ synthase	A0A2L0UZF5	Agrobacterium_phage	8.3e-87	36.6
AZY46381.1\|2832126_2833473_-	mechanosensitive ion channel protein MscS	NA	NA	NA	NA
AZY47576.1\|2833580_2835002_+	argininosuccinate lyase	NA	NA	NA	NA
AZY46382.1\|2835071_2835656_-	nitroreductase	NA	NA	NA	NA
AZY46383.1\|2835758_2836709_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46384.1\|2836843_2837950_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY46385.1\|2837960_2839058_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA
AZY46386.1\|2839202_2840408_-	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA
AZY46387.1\|2840414_2840936_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA
AZY46388.1\|2840932_2841424_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA
AZY46389.1\|2841420_2841672_-	MoaD/ThiS family protein	NA	NA	NA	NA
AZY47577.1\|2841652_2842138_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA
AZY46390.1\|2842273_2845735_+	hypothetical protein	NA	NA	NA	NA
AZY46391.1\|2845731_2846637_+	dienelactone hydrolase family protein	NA	NA	NA	NA
AZY46392.1\|2846646_2847078_-	lipoprotein	NA	NA	NA	NA
AZY47578.1\|2847324_2847828_+	peroxiredoxin	M1I839	Pelagibacter_phage	1.8e-24	44.1
AZY46393.1\|2847839_2849306_+	MFS transporter	NA	NA	NA	NA
AZY46394.1\|2849380_2850256_-	hypothetical protein	NA	NA	NA	NA
AZY47579.1\|2850252_2851260_-	biotin synthase	NA	NA	NA	NA
AZY46395.1\|2851727_2852033_+	DUF4148 domain-containing protein	NA	NA	NA	NA
AZY46396.1\|2852123_2852714_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY46397.1\|2852904_2853921_-\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_23

2857064 : 2923876

uncultured_Mediterranean_phage(28.57%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY46400.1\|2857064_2858015_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46401.1\|2858113_2859064_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46402.1\|2859060_2859855_-	N-formylglutamate deformylase	NA	NA	NA	NA
AZY46403.1\|2859886_2860591_-	oxidoreductase	NA	NA	NA	NA
AZY46404.1\|2860665_2861466_-	SURF1 family protein	NA	NA	NA	NA
AZY46405.1\|2861462_2861870_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA
AZY46406.1\|2861866_2862508_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA
AZY46407.1\|2862500_2864522_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA
AZY46408.1\|2865761_2867093_+	MFS transporter	NA	NA	NA	NA
AZY46409.1\|2867089_2868040_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46410.1\|2869746_2870052_-	hypothetical protein	NA	NA	NA	NA
AZY46411.1\|2870720_2871059_+	transcriptional regulator	NA	NA	NA	NA
AZY46412.1\|2875613_2876216_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY46413.1\|2876312_2877602_+	MFS transporter	NA	NA	NA	NA
AZY46414.1\|2877659_2878391_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-12	31.0
AZY46415.1\|2878387_2879191_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.9e-14	23.5
AZY46416.1\|2879187_2880276_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
AZY46417.1\|2880272_2881202_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY46418.1\|2881350_2882496_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY46419.1\|2882517_2883468_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46420.1\|2883798_2887620_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
AZY46421.1\|2887776_2888445_-	lipoprotein	NA	NA	NA	NA
AZY46422.1\|2888449_2890123_-	MCE family protein	NA	NA	NA	NA
AZY46423.1\|2890141_2891461_-	paraquat-inducible membrane protein A	NA	NA	NA	NA
AZY46424.1\|2891465_2893817_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	4.2e-164	41.9
AZY47580.1\|2893836_2896005_-	penicillin-binding protein 1C	NA	NA	NA	NA
AZY46425.1\|2896001_2901191_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA
AZY46426.1\|2901280_2901595_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.2e-10	43.8
AZY46427.1\|2901822_2902068_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-20	76.6
AZY46428.1\|2902162_2902681_+	hypothetical protein	A0A1B1IUW8	uncultured_Mediterranean_phage	5.1e-14	42.2
AZY46429.1\|2902780_2903986_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
AZY46430.1\|2904101_2905499_-	chloride channel protein EriC	NA	NA	NA	NA
AZY46431.1\|2905615_2906194_-	superoxide dismutase [Fe]	NA	NA	NA	NA
AZY46432.1\|2906266_2907658_-	exodeoxyribonuclease VII large subunit	A0A1V0SD82	Indivirus	1.4e-29	32.0
AZY46433.1\|2907825_2908776_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46434.1\|2909056_2909677_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
AZY46435.1\|2909673_2910087_+	biopolymer transporter ExbD	NA	NA	NA	NA
AZY46436.1\|2910083_2911127_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
AZY46437.1\|2911182_2911371_+	hypothetical protein	NA	NA	NA	NA
AZY46438.1\|2911380_2912145_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
AZY46439.1\|2912235_2912892_+	adenylate kinase	NA	NA	NA	NA
AZY46440.1\|2912983_2913742_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
AZY46441.1\|2913767_2915369_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA
AZY46442.1\|2915569_2916574_+	DUF4880 domain-containing protein	NA	NA	NA	NA
AZY46443.1\|2916674_2916938_+	30S ribosomal protein S20	NA	NA	NA	NA
AZY46444.1\|2917055_2917832_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA
AZY46445.1\|2918422_2919373_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46446.1\|2921756_2922869_-	malate dehydrogenase	NA	NA	NA	NA
AZY46447.1\|2922925_2923876_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_24

2954262 : 2993451

Planktothrix_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY46476.1\|2954262_2955213_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46477.1\|2955199_2955445_-	hypothetical protein	NA	NA	NA	NA
AZY46478.1\|2955333_2956230_-	inositol monophosphatase	NA	NA	NA	NA
AZY46479.1\|2958507_2960733_+	glycosyl hydrolase	NA	NA	NA	NA
AZY46480.1\|2960897_2961986_+	methionine import ATP-binding protein MetN	G9BWD6	Planktothrix_phage	8.7e-32	36.4
AZY46481.1\|2961942_2962596_+	ABC transporter permease	NA	NA	NA	NA
AZY46482.1\|2962643_2963441_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY46483.1\|2963972_2964923_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46484.1\|2965003_2966152_+	alcohol dehydrogenase	NA	NA	NA	NA
AZY46485.1\|2966208_2967159_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46486.1\|2967145_2967364_-	hypothetical protein	NA	NA	NA	NA
AZY46487.1\|2967257_2967563_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AZY46488.1\|2967591_2968026_-	DUF126 domain-containing protein	NA	NA	NA	NA
AZY46489.1\|2968027_2969272_-	DUF521 domain-containing protein	NA	NA	NA	NA
AZY46490.1\|2969268_2969979_-	FadR family transcriptional regulator	NA	NA	NA	NA
AZY47582.1\|2969993_2970905_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY46491.1\|2971267_2971672_+	hypothetical protein	NA	NA	NA	NA
AZY46492.1\|2971668_2972127_+	hypothetical protein	NA	NA	NA	NA
AZY46493.1\|2972133_2973042_+	hypothetical protein	NA	NA	NA	NA
AZY47583.1\|2973038_2973905_+	sugar ABC transporter permease	NA	NA	NA	NA
AZY46494.1\|2973891_2974719_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
AZY46495.1\|2974729_2975857_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-23	32.3
AZY46496.1\|2976934_2978173_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46497.1\|2978214_2979477_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY46498.1\|2979483_2980236_+	DNA-binding protein	NA	NA	NA	NA
AZY46499.1\|2980287_2980473_-	hypothetical protein	NA	NA	NA	NA
AZY46500.1\|2980748_2981213_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA
AZY46501.1\|2981244_2981904_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
AZY46502.1\|2982048_2984157_+	AsmA family protein	NA	NA	NA	NA
AZY46503.1\|2984153_2985104_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46504.1\|2985207_2985828_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY47584.1\|2985931_2986672_+	oxidoreductase	NA	NA	NA	NA
AZY46505.1\|2987806_2988931_-	hypothetical protein	NA	NA	NA	NA
AZY46506.1\|2988976_2989345_-	hypothetical protein	NA	NA	NA	NA
AZY46507.1\|2989586_2990537_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46508.1\|2991572_2992115_-	hypothetical protein	NA	NA	NA	NA
AZY46509.1\|2992319_2992514_+	hypothetical protein	NA	NA	NA	NA
AZY46510.1\|2992500_2993451_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_25

3231466 : 3266304

Erwinia_phage(20.0%)

transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY46697.1\|3231466_3232417_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46698.1\|3232861_3233173_-	cell division protein ZapA	NA	NA	NA	NA
AZY46699.1\|3233172_3233703_-	hypothetical protein	NA	NA	NA	NA
AZY46700.1\|3233865_3234816_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46701.1\|3235105_3235570_+	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA
AZY46702.1\|3235584_3237090_+	tripartite tricarboxylate transporter permease	NA	NA	NA	NA
AZY46703.1\|3237343_3238951_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA
AZY46704.1\|3239006_3239912_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZY46705.1\|3240352_3241303_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46706.1\|3241401_3242352_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46707.1\|3242433_3243015_-	ATP:cob(I)alamin adenosyltransferase	NA	NA	NA	NA
AZY47602.1\|3243439_3243745_+	RND transporter	NA	NA	NA	NA
AZY46708.1\|3243758_3245093_-	HslU--HslV peptidase ATPase subunit	A0A191ZC11	Erwinia_phage	3.5e-43	29.6
AZY46709.1\|3245114_3245654_-	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA
AZY46710.1\|3245801_3246266_-	RNA polymerase-binding protein DksA	NA	NA	NA	NA
AZY46711.1\|3246408_3247524_-	GTP-binding protein	NA	NA	NA	NA
AZY46712.1\|3247800_3248304_-	transcriptional repressor	NA	NA	NA	NA
AZY46713.1\|3248441_3248642_+	hypothetical protein	NA	NA	NA	NA
AZY46714.1\|3248632_3249355_+	metal ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.1e-11	30.0
AZY46715.1\|3249351_3250248_+	metal ABC transporter permease	NA	NA	NA	NA
AZY46716.1\|3250244_3251180_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY47603.1\|3251185_3251809_+	DUF1007 domain-containing protein	NA	NA	NA	NA
AZY46717.1\|3251799_3252768_+	nickel transporter	NA	NA	NA	NA
AZY46718.1\|3252816_3254958_+	TonB-dependent receptor	NA	NA	NA	NA
AZY46719.1\|3254970_3255951_-	tyrosine recombinase XerC	A0A166YH27	Gordonia_phage	3.3e-14	30.5
AZY46720.1\|3255965_3256658_-	DUF484 domain-containing protein	NA	NA	NA	NA
AZY46721.1\|3256684_3257596_-	diaminopimelate epimerase	NA	NA	NA	NA
AZY46722.1\|3257638_3258529_-	acyltransferase	NA	NA	NA	NA
AZY46723.1\|3258525_3259380_-	lipid A biosynthesis lauroyl acyltransferase	NA	NA	NA	NA
AZY46724.1\|3259528_3260827_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.6e-125	60.9
AZY46725.1\|3260937_3261189_+	DUF1289 domain-containing protein	NA	NA	NA	NA
AZY46726.1\|3261268_3262309_+	glycosyltransferase family 1 protein	NA	NA	NA	NA
AZY46727.1\|3262588_3264007_+	adenosylhomocysteinase	S4VPF6	Pandoravirus	8.7e-40	29.4
AZY46728.1\|3264077_3264413_+\|holin	phage holin family protein	NA	NA	NA	NA
AZY46729.1\|3264412_3265255_+	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA
AZY46730.1\|3265353_3266304_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_26

3278133 : 3329012

Planktothrix_phage(33.33%)

transposase,protease,tRNA,integrase

attL 3311808:3311826|attR 3331696:3331714

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY46738.1\|3278133_3279084_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY47606.1\|3279396_3280875_+	phospholipase D family protein	NA	NA	NA	NA
AZY46739.1\|3280881_3281991_-	molybdenum import ATP-binding protein ModC	G9BWD6	Planktothrix_phage	7.5e-23	34.5
AZY46740.1\|3282002_3282683_-	molybdate ABC transporter permease subunit	NA	NA	NA	NA
AZY46741.1\|3282704_3283460_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY47607.1\|3283595_3284480_-	alpha/beta hydrolase	NA	NA	NA	NA
AZY46742.1\|3284567_3285149_+	hypothetical protein	NA	NA	NA	NA
AZY46743.1\|3285241_3285364_-	hypothetical protein	NA	NA	NA	NA
AZY46744.1\|3285409_3285709_-	DUF4148 domain-containing protein	NA	NA	NA	NA
AZY47608.1\|3285860_3286286_-	hypothetical protein	NA	NA	NA	NA
AZY46745.1\|3288492_3288996_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AZY46746.1\|3289011_3289962_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46747.1\|3289948_3290146_-	hypothetical protein	NA	NA	NA	NA
AZY46748.1\|3290489_3291263_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY46749.1\|3291395_3292406_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY46750.1\|3292557_3294213_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA
AZY46751.1\|3294267_3294609_-	cupin domain-containing protein	NA	NA	NA	NA
AZY46752.1\|3294622_3296062_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
AZY46753.1\|3296194_3297010_-	MerR family transcriptional regulator	NA	NA	NA	NA
AZY46754.1\|3297028_3297217_+	hypothetical protein	NA	NA	NA	NA
AZY46755.1\|3297203_3298154_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46756.1\|3299541_3300489_+	hypothetical protein	NA	NA	NA	NA
AZY46757.1\|3300715_3301456_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY46758.1\|3301541_3302492_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46759.1\|3303933_3305505_-	winged helix family transcriptional regulator	NA	NA	NA	NA
AZY46760.1\|3305837_3307691_+	hypothetical protein	NA	NA	NA	NA
AZY46761.1\|3307735_3310300_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
AZY46762.1\|3310718_3311669_+\|transposase	IS481 family transposase	NA	NA	NA	NA
3311808:3311826	attL	NA	NA	NA	NA
AZY46763.1\|3314534_3315029_-	DUF4276 domain-containing protein	NA	NA	NA	NA
AZY46764.1\|3315045_3315996_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46765.1\|3315982_3316183_-	hypothetical protein	NA	NA	NA	NA
AZY46766.1\|3316179_3317391_-	chromosome segregation protein SMC	NA	NA	NA	NA
AZY46767.1\|3317406_3320358_-	restriction endonuclease subunit M	G8I4P9	Mycobacterium_phage	2.9e-21	25.1
AZY46768.1\|3320359_3323479_-	restriction endonuclease	NA	NA	NA	NA
AZY47609.1\|3323475_3323616_-	DEAD/DEAH box helicase	NA	NA	NA	NA
AZY46769.1\|3323626_3324673_-	Fic family protein	NA	NA	NA	NA
AZY46770.1\|3325014_3326142_-\|integrase	site-specific integrase	A0A1B0VMI6	Pseudomonas_phage	1.4e-48	33.6
AZY46771.1\|3326421_3327513_-	redox-regulated ATPase YchF	NA	NA	NA	NA
AZY46772.1\|3327585_3328368_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AZY46773.1\|3328364_3329012_-\|tRNA	peptidyl-tRNA hydrolase	NA	NA	NA	NA
3331696:3331714	attR	NA	NA	NA	NA

DBSCAN-SWA_27

3377899 : 3431640

Staphylococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY46810.1\|3377899_3378850_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46811.1\|3379254_3379899_-	urease accessory protein UreG	NA	NA	NA	NA
AZY46812.1\|3379923_3380508_-	urease accessory protein UreF	NA	NA	NA	NA
AZY46813.1\|3380608_3381226_-	urease accessory protein UreE	NA	NA	NA	NA
AZY46814.1\|3381228_3382944_-	urease subunit alpha	NA	NA	NA	NA
AZY46815.1\|3382940_3383249_-	urease subunit beta	NA	NA	NA	NA
AZY46816.1\|3383265_3383901_-	urease accessory protein UreJ	NA	NA	NA	NA
AZY46817.1\|3383927_3384230_-	urease subunit gamma	NA	NA	NA	NA
AZY46818.1\|3384330_3385185_-	urease accessory protein UreD	NA	NA	NA	NA
AZY46819.1\|3385766_3386039_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AZY46820.1\|3386456_3386864_-	GFA family protein	NA	NA	NA	NA
AZY46821.1\|3387233_3388028_-	GntR family transcriptional regulator	NA	NA	NA	NA
AZY46822.1\|3388128_3389364_+	methylaspartate ammonia-lyase	NA	NA	NA	NA
AZY46823.1\|3389432_3390449_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY46824.1\|3390445_3391837_+	MmgE/PrpD family protein	NA	NA	NA	NA
AZY46825.1\|3391833_3393030_+	MFS transporter	NA	NA	NA	NA
AZY46826.1\|3393026_3394565_-	SpoVR family protein	NA	NA	NA	NA
AZY46827.1\|3394561_3395821_-	hypothetical protein	NA	NA	NA	NA
AZY46828.1\|3397761_3398712_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46829.1\|3399478_3400573_-	CoA transferase	NA	NA	NA	NA
AZY46830.1\|3400565_3401900_-	phenylacetate--CoA ligase family protein	NA	NA	NA	NA
AZY46831.1\|3401853_3402537_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY46832.1\|3402562_3403726_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
AZY46833.1\|3403722_3404724_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY46834.1\|3404723_3405596_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY46835.1\|3405592_3406342_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.9e-09	27.8
AZY46836.1\|3406338_3407130_-	ABC transporter ATP-binding protein	A0A1M7XV31	Cedratvirus	1.7e-08	29.4
AZY46837.1\|3407126_3408266_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY46838.1\|3408574_3409327_+	KR domain-containing protein	NA	NA	NA	NA
AZY46839.1\|3409360_3410143_+	enoyl-CoA hydratase	NA	NA	NA	NA
AZY46840.1\|3410146_3410536_+	DNA-binding protein	NA	NA	NA	NA
AZY46841.1\|3411675_3412539_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA
AZY46842.1\|3412574_3413663_+	hypothetical protein	NA	NA	NA	NA
AZY46843.1\|3413659_3414610_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46844.1\|3414596_3414965_-	hypothetical protein	NA	NA	NA	NA
AZY46845.1\|3414963_3417942_+	hypothetical protein	NA	NA	NA	NA
AZY46846.1\|3418868_3419747_+	fatty acid desaturase	NA	NA	NA	NA
AZY46847.1\|3421695_3422646_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46848.1\|3422642_3423110_-	ribonuclease HI	J9Q745	Salmonella_phage	5.6e-36	50.7
AZY46849.1\|3423152_3423923_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AZY46850.1\|3423943_3424744_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
AZY46851.1\|3424754_3426164_+	lytic transglycosylase	NA	NA	NA	NA
AZY46852.1\|3426258_3427044_+	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA
AZY46853.1\|3427283_3428300_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY46854.1\|3428407_3428800_-	OsmC family peroxiredoxin	NA	NA	NA	NA
AZY46855.1\|3428937_3429618_+	DUF533 domain-containing protein	NA	NA	NA	NA
AZY46856.1\|3429622_3430621_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY46857.1\|3430689_3431640_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_28

3437795 : 3497095

Acinetobacter_phage(27.27%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY46861.1\|3437795_3439559_+\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	5.0e-162	50.0
AZY46862.1\|3439670_3440549_+	septum site-determining protein MinC	NA	NA	NA	NA
AZY46863.1\|3440661_3441477_+	septum site-determining protein MinD	NA	NA	NA	NA
AZY46864.1\|3441480_3441732_+	cell division topological specificity factor	NA	NA	NA	NA
AZY46865.1\|3441816_3442833_-\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AZY46866.1\|3443163_3443385_-	hypothetical protein	NA	NA	NA	NA
AZY46867.1\|3445745_3446663_-	EamA/RhaT family transporter	NA	NA	NA	NA
AZY46868.1\|3447160_3448369_-	ABC transporter permease	NA	NA	NA	NA
AZY46869.1\|3448448_3450020_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY46870.1\|3450137_3451073_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
AZY46871.1\|3451261_3452206_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	8.4e-07	23.2
AZY46872.1\|3452274_3452490_-	hypothetical protein	NA	NA	NA	NA
AZY46873.1\|3452773_3458491_+	excinuclease ABC subunit A	A0A1B1IVR3	uncultured_Mediterranean_phage	1.0e-195	39.5
AZY46874.1\|3458496_3459624_+	aminodeoxychorismate synthase, component I	S4VT78	Pandoravirus	3.8e-38	37.8
AZY46875.1\|3459679_3460306_+	aminotransferase	NA	NA	NA	NA
AZY46876.1\|3460577_3461594_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY46877.1\|3461689_3462400_-	oxidoreductase	NA	NA	NA	NA
AZY47612.1\|3462396_3463386_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY47613.1\|3463517_3465113_+	acyl-CoA synthetase	NA	NA	NA	NA
AZY46878.1\|3465115_3465853_+	GntR family transcriptional regulator	NA	NA	NA	NA
AZY46879.1\|3466008_3466881_-\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	NA	NA	NA	NA
AZY46880.1\|3467149_3468370_+	MFS transporter	NA	NA	NA	NA
AZY46881.1\|3468366_3469026_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA
AZY46882.1\|3469097_3469730_+	pyridoxine/pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
AZY46883.1\|3469759_3470278_+	flavin reductase	NA	NA	NA	NA
AZY46884.1\|3470288_3471398_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
AZY46885.1\|3471444_3472299_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
AZY46886.1\|3472300_3473203_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY46887.1\|3474425_3475376_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46888.1\|3477132_3478122_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46889.1\|3478297_3479086_-	indole-3-glycerol-phosphate synthase	A0A0P0IR83	Acinetobacter_phage	5.1e-66	53.0
AZY46890.1\|3479082_3480114_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	7.4e-73	42.7
AZY46891.1\|3480132_3480696_-	type 1 glutamine amidotransferase	A0A0P0IKJ1	Acinetobacter_phage	1.1e-65	62.1
AZY46892.1\|3480751_3482272_-	anthranilate synthase component I	S4VT78	Pandoravirus	9.0e-43	32.1
AZY46893.1\|3482535_3483240_-	phosphoglycolate phosphatase	NA	NA	NA	NA
AZY46894.1\|3483247_3483985_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
AZY46895.1\|3484090_3484465_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
AZY46896.1\|3484507_3485797_+	hypothetical protein	NA	NA	NA	NA
AZY46897.1\|3485793_3486963_+	ubiquinone biosynthesis protein UbiH	NA	NA	NA	NA
AZY46898.1\|3486959_3487799_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA
AZY46899.1\|3487858_3488794_+	hydroxyacid dehydrogenase	A0A1J0F959	Only_Syngen_Nebraska_virus	6.4e-15	27.7
AZY46900.1\|3488806_3489757_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46901.1\|3489855_3490818_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	4.6e-93	64.5
AZY46902.1\|3490849_3491209_-	dihydroneopterin aldolase	NA	NA	NA	NA
AZY46903.1\|3491333_3492236_+	NAD(P)/FAD-dependent oxidoreductase	G3MA85	Bacillus_virus	1.9e-08	24.0
AZY46904.1\|3492237_3494010_-	PDZ domain-containing protein	NA	NA	NA	NA
AZY46905.1\|3494044_3494821_+	enoyl-CoA hydratase	NA	NA	NA	NA
AZY46906.1\|3496144_3497095_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_29

3512033 : 3570106

Planktothrix_phage(12.5%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY46918.1\|3512033_3512984_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46919.1\|3513112_3514246_-	peptidase	NA	NA	NA	NA
AZY46920.1\|3514289_3515195_-	alpha/beta hydrolase	NA	NA	NA	NA
AZY46921.1\|3515197_3516898_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.0e-15	32.7
AZY46922.1\|3516894_3517815_-	ABC transporter permease	NA	NA	NA	NA
AZY46923.1\|3517822_3518800_-	ABC transporter permease	NA	NA	NA	NA
AZY46924.1\|3518858_3519893_-	succinylglutamate desuccinylase	NA	NA	NA	NA
AZY46925.1\|3521867_3522104_-	hypothetical protein	NA	NA	NA	NA
AZY46926.1\|3522230_3523094_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
AZY46927.1\|3523182_3524004_+	enoyl-CoA hydratase	NA	NA	NA	NA
AZY46928.1\|3524083_3524821_-	enoyl-CoA hydratase	NA	NA	NA	NA
AZY46929.1\|3524817_3525810_-	nitronate monooxygenase	NA	NA	NA	NA
AZY46930.1\|3525923_3526586_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY46931.1\|3526630_3527779_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AZY46932.1\|3530102_3531053_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46933.1\|3531393_3532344_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46934.1\|3532442_3533393_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46935.1\|3533689_3534187_+	hypothetical protein	NA	NA	NA	NA
AZY46936.1\|3534229_3536005_+	copper resistance system multicopper oxidase	NA	NA	NA	NA
AZY47616.1\|3536051_3536879_+	copper resistance protein B	NA	NA	NA	NA
AZY46937.1\|3536885_3537620_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AZY46938.1\|3538789_3539584_-	IclR family transcriptional regulator	NA	NA	NA	NA
AZY46939.1\|3539873_3540464_+	cysteine dioxygenase	NA	NA	NA	NA
AZY46940.1\|3540497_3541826_-	amidase	NA	NA	NA	NA
AZY46941.1\|3541900_3543046_-	transporter	NA	NA	NA	NA
AZY46942.1\|3543157_3544156_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46943.1\|3544118_3544553_+	carbon monoxide dehydrogenase	NA	NA	NA	NA
AZY46944.1\|3546069_3546954_+	EamA/RhaT family transporter	NA	NA	NA	NA
AZY46945.1\|3546950_3548156_-	cardiolipin synthase ClsB	NA	NA	NA	NA
AZY46946.1\|3548152_3549013_-	endonuclease	NA	NA	NA	NA
AZY46947.1\|3549125_3550916_-\|tRNA	aspartate--tRNA ligase	A0A1V0SAC0	Catovirus	6.5e-08	25.5
AZY46948.1\|3550956_3551622_-	DUF502 domain-containing protein	A0A2I7S9X1	Vibrio_phage	6.7e-11	28.4
AZY46949.1\|3551622_3551931_-	FmdB family transcriptional regulator	NA	NA	NA	NA
AZY47617.1\|3552096_3553383_-	hypothetical protein	NA	NA	NA	NA
AZY46950.1\|3554816_3555767_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY46951.1\|3557718_3558933_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA
AZY46952.1\|3559038_3560028_+	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	4.3e-38	37.7
AZY46953.1\|3560024_3560633_+	hydrolase	E3T535	Cafeteria_roenbergensis_virus	5.2e-10	26.1
AZY46954.1\|3560645_3561275_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
AZY46955.1\|3561271_3561892_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
AZY46956.1\|3561923_3562715_+	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	9.5e-20	27.4
AZY46957.1\|3563557_3564022_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
AZY46958.1\|3564040_3564967_+	HPr kinase/phosphorylase	NA	NA	NA	NA
AZY46959.1\|3565020_3566307_-	cytochrome c	NA	NA	NA	NA
AZY46960.1\|3567237_3568110_+	RNase adaptor protein RapZ	A0A1P8D5W0	Corynebacterium_phage	2.4e-08	34.5
AZY46961.1\|3568106_3569057_+	septal ring lytic transglycosylase RlpA family protein	F5B3X9	Synechococcus_phage	6.9e-17	47.2
AZY46962.1\|3569155_3570106_+\|transposase	IS481 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP025480

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection