CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP025477	Bordetella pertussis strain I859 chromosome, complete genome	5 crisprs	csa3,cas3,DinG,DEDDh	0	0	30	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP025477_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025477_1

250590-250674

Orphan

Consensus_repeat	Method
GGTGCCTGTCCCCGCGGGGACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025477_1

>merge|CP025477|1|250590-250674|CRISPRCasFinder
GGTGCCTGTCCCCGCGGGGACAGATACCGTCTTGGCCGTCAAGCGTTCATGGCGTATGACAGGGTGCCTGTCCCCGCGGGGACAG

>CP025477|1|1|250590-250674|CRISPRCasFinder
GGTGCCTGTCCCCGCGGGGACAG	ATACCGTCTTGGCCGTCAAGCGTTCATGGCGTATGACAG
GGTGCCTGTCCCCGCGGGGACAG

Protein	Signature genes	Signature genes Name	Protein_function
CP025477.1\|AZY32800.1\|245061_246018_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
CP025477.1\|AZY32799.1\|241548_243651_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|129868
CP025477.1\|AZY32804.1\|248575_249277_-\|DnaA-regulatory-inactivator-Hda	unknown	unknown	gnl\|CDD\|236347
CP025477.1\|AZY32814.1\|260961_262716_+\|gamma-glutamyltransferase	unknown	unknown	gnl\|CDD\|223482
CP025477.1\|AZY32810.1\|256383_257775_+\|class-II-fumarate-hydratase	unknown	unknown	gnl\|CDD\|234779
CP025477.1\|AZY32803.1\|247880_248579_-\|HAD-IB-family-hydrolase	unknown	unknown	gnl\|CDD\|319796
CP025477.1\|AZY32812.1\|258907_259891_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE	unknown	unknown	gnl\|CDD\|270295
CP025477.1\|AZY32801.1\|246036_246528_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl\|CDD\|172582
CP025477.1\|AZY32808.1\|253598_254237_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182775
CP025477.1\|AZY32796.1\|238115_238526_+\|4-carboxymuconolactone-decarboxylase	unknown	unknown	gnl\|CDD\|131478
CP025477.1\|AZY32809.1\|255695_256232_-\|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl\|CDD\|223873
CP025477.1\|AZY32806.1\|250684_251626_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	unknown	unknown	gnl\|CDD\|234626
CP025477.1\|AZY32807.1\|251622_253512_-\|DNA-mismatch-repair-protein-MutL	unknown	unknown	gnl\|CDD\|234630
CP025477.1\|AZY32811.1\|257791_258772_-\|AEC-family-transporter	unknown	unknown	gnl\|CDD\|223751
CP025477.1\|AZY32798.1\|240334_241378_-\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270320
CP025477.1\|AZY36015.1\|254379_255624_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|182376
CP025477.1\|AZY32797.1\|239547_240291_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
CP025477.1\|AZY32813.1\|259955_260855_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176107
CP025477.1\|AZY32802.1\|246524_247880_-\|polynucleotide-adenylyltransferase-PcnB	unknown	unknown	gnl\|CDD\|130997
CP025477.1\|AZY32805.1\|249529_250579_+\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439

Protein	Function_ID	Function_description	E-value
CP025477.1\|AZY32800.1\|245061_246018_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	6.01101e-118
CP025477.1\|AZY32799.1\|241548_243651_+\|hypothetical-protein	gnl\|CDD\|129868	TIGR00786, TRAP_transporter_permease_protein_SiaT, TRAP transporter, DctM subunit. The Tripartite ATP-independent Periplasmic Transporter (TRAP-T) Family (TC 2.A.56)- DctM subunit TRAP-T family permeases generally consist of three components, and these systems have so far been found in Gram-negative bacteria, Gram-postive bacteria and archaea. Only one member of the family has been both sequenced and functionally characterized. This system is the DctPQM system of Rhodobacter capsulatus (Forward et al., 1997). DctP is a periplasmic dicarboxylate (malate, fumarate, succinate) binding receptor that is biochemically well-characterized. DctQ is an integral cytoplasmic membrane protein with 4 putative transmembrane a-helical spanners (TMSs). DctM is a second integral cytoplasmic membrane protein with 12 putative TMSs. These proteins have been shown to be both necessary and sufficient for the proton motive force-dependent uptake of dicarboxylates into R. capsulatus. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.77055e-96
CP025477.1\|AZY32804.1\|248575_249277_-\|DnaA-regulatory-inactivator-Hda	gnl\|CDD\|236347	PRK08903, PRK08903, DnaA regulatory inactivator Hda; Validated.	2.81236e-100
CP025477.1\|AZY32814.1\|260961_262716_+\|gamma-glutamyltransferase	gnl\|CDD\|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	0
CP025477.1\|AZY32810.1\|256383_257775_+\|class-II-fumarate-hydratase	gnl\|CDD\|234779	PRK00485, fumC, fumarate hydratase; Reviewed.	0
CP025477.1\|AZY32803.1\|247880_248579_-\|HAD-IB-family-hydrolase	gnl\|CDD\|319796	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C. This family includes Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C, PgpC (previously named yfhB) which catalyzes the dephosphorylation of phosphatidylglycerol-phosphate (PGP) to phosphatidylglycerol (PG). This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.91431e-64
CP025477.1\|AZY32812.1\|258907_259891_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE	gnl\|CDD\|270295	cd13577, PBP2_BugE_Glu, Glutamate transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	4.35876e-158
CP025477.1\|AZY32801.1\|246036_246528_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl\|CDD\|172582	PRK14092, PRK14092, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase.	2.78166e-87
CP025477.1\|AZY32808.1\|253598_254237_+\|hypothetical-protein	gnl\|CDD\|182775	PRK10847, PRK10847, DedA family protein.	1.10927e-69
CP025477.1\|AZY32796.1\|238115_238526_+\|4-carboxymuconolactone-decarboxylase	gnl\|CDD\|131478	TIGR02425, putative_gamma-carboxymuconolactone_decarboxylase, 4-carboxymuconolactone decarboxylase. Members of this family are 4-carboxymuconolactone decarboxylase, which catalyzes the third step in the catabolism of protocatechuate (and therefore the fourth step in the catabolism of para-hydroxybenzoate, of 3-hydroxybenzoate, of vanillate, etc.). Most members of this family are encoded within protocatechuate catabolism operons. This protein is sometimes found as a fusion protein with other enzymes of the pathway, as in Rhodococcus opacus, Streptomyces avermitilis, and Caulobacter crescentus. [Energy metabolism, Other].	1.36265e-47
CP025477.1\|AZY32809.1\|255695_256232_-\|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl\|CDD\|223873	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only].	2.28113e-54
CP025477.1\|AZY32806.1\|250684_251626_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	gnl\|CDD\|234626	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.	4.17279e-156
CP025477.1\|AZY32807.1\|251622_253512_-\|DNA-mismatch-repair-protein-MutL	gnl\|CDD\|234630	PRK00095, mutL, DNA mismatch repair endonuclease MutL.	0
CP025477.1\|AZY32811.1\|257791_258772_-\|AEC-family-transporter	gnl\|CDD\|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	1.13912e-41
CP025477.1\|AZY32798.1\|240334_241378_-\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270320	cd13602, PBP2_TRAP_BpDctp6_7, Substrate-binding domain of a pyroglutamic acid binding DctP subfamily of the tripartite ATP-independent periplasmic transporters; contains the type 2 periplasmic binding protein fold. DctP6 and DctP7 groups of the TRAP transporters that involved in pyroglutamic acid transport. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.99378e-85
CP025477.1\|AZY36015.1\|254379_255624_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|182376	PRK10319, PRK10319, N-acetylmuramoyl-L-alanine amidase AmiA.	7.29619e-86
CP025477.1\|AZY32797.1\|239547_240291_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	5.58304e-45
CP025477.1\|AZY32813.1\|259955_260855_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176107	cd08415, PBP2_LysR_opines_like, The C-terminal substrate-domain of LysR-type transcriptional regulators involved in the catabolism of opines and that of related regulators, contains the type 2 periplasmic binding fold. This CD includes the C-terminal substrate-domain of LysR-type transcriptional regulators, OccR and NocR, involved in the catabolism of opines and that of LysR for lysine biosynthesis which clustered together in phylogenetic trees. Opines, such as octopine and nopaline, are low molecular weight compounds found in plant crown gall tumors that are produced by the parasitic bacterium Agrobacterium. There are at least 30 different opines identified so far. Opines are utilized by tumor-colonizing bacteria as a source of carbon, nitrogen, and energy. NocR and OccR belong to the family of LysR-type transcriptional regulators that positively regulates the catabolism of nopaline and octopine, respectively. Both nopaline and octopalin are arginine derivatives. In Agrobacterium tumefaciens, NocR regulates expression of the divergently transcribed nocB and nocR genes of the nopaline catabolism (noc) region. OccR protein activates the occQ operon of the Ti plasmid in response to octopine. This operon encodes proteins required for the uptake and catabolism of octopine. The occ operon also encodes the TraR protein, which is a quorum-sensing transcriptional regulator of the Ti plasmid tra regulon. LysR is the transcriptional activator of lysA gene encoding diaminopimelate decarboxylase, an enzyme that catalyses the decarboxylation of diaminopimelate to produce lysine. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.62875e-38
CP025477.1\|AZY32802.1\|246524_247880_-\|polynucleotide-adenylyltransferase-PcnB	gnl\|CDD\|130997	TIGR01942, pcnB, poly(A) polymerase. This model describes the pcnB family of poly(A) polymerases (also known as plasmid copy number protein). These enzymes sequentially add adenosine nucleotides to the 3' end of RNAs, targeting them for degradation by the cell. This was originally described for anti-sense RNAs, but was later demonstrated for mRNAs as well. Members of this family are as yet limited to the gamma- and beta-proteobacteria, with putative members in the Chlamydiacae and spirochetes. This family has homology to tRNA nucleotidyltransferase (cca).	4.58369e-147
CP025477.1\|AZY32805.1\|249529_250579_+\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0

>CP025477.1|AZY32805.1|249529_250579_+|phosphoribosylformylglycinamidine-cyclo-ligase
MTNQHSAPLTYRDAGVDIDAGDALVDRIKPLAARTMRPGVLAGIGGFGALFEVPKKFREPVLVSGTDGVGTKLRLAFDWNRHDTVGIDLVAMSVNDILVQGAEPLYFLDYFACGKLSVDTAAAVVGGIARGCELAGCALIGGETAEMPGMYPDGEYDLAGFAVGAVDKSAIIDGKSIQPGDVVLGLASSGAHSNGYSLVRKILERAGARPDQDFHGQPLVDVVMAPTRIYVKQVLAALDRHGPAIKGLAHITGGGLLDNVPRILQPGMAAQLQRDGWEMPKLFQWLQQQGSVADAEMHRVFNCGIGMVLVVAADQADAVAATLREQGEIVNRIGEIVPQQDGMAQTVVV
>CP025477.1|AZY32804.1|248575_249277_-|DnaA-regulatory-inactivator-Hda
MNRQLLLDVLPAPAPALNNYIAGPNGQALAAAHALTAGRAIYLWGPAGCGRTHLLRGLSARPEAIYIDAARAAQSLRELAEADSTAPMPRLVAVDDVHRMDDARQAGLFALYNRWRESAATGRAFALAVSGDRAPMSLPLREDLRTRLGWDLVFRLDPLSDADKLAALTAQAAERGLQLAPEVINWMLTHHERDIRKLAALLDALDRYSLATGRPITIPLLRAMLADPHSQAT
>CP025477.1|AZY32803.1|247880_248579_-|HAD-IB-family-hydrolase
MTTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIAQARGWQVIDLFDHLEDAKS
>CP025477.1|AZY32802.1|246524_247880_-|polynucleotide-adenylyltransferase-PcnB
MITETIRKFVGRLFAPALRGPQRIGAERHGIDRRNVSRHAIKVCDVLRQHGYEAYIVGGAVRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPASDDQETDEHGRILRDNVFGSQEEDAARRDFTMNALYYDPHTEEVIDYHQGVQDLKKRQVRIIGDPVKRYREDPVRMLRAVRFAAKLNGSIDTATRQPIRTMASLIENVPASRLFDEMLKLLTCGHAMDCLRQLRNDGLHHGLLPLLDVVLEQPGGENFVELALERTDARVRAGKTISPSFLFAALLWQLVDVRWKQLRAQGEHNIPALVQAADSVLDEQTEKLAIQRRFSSDMREIWFMQPRFERRAGKTIYRMLEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANGDDATRAEMIEETAHLPRETGDAPAQKRRRPRRRPSNRPREPQ
>CP025477.1|AZY32801.1|246036_246528_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MNGSPASTLAYVGLGASLGDAAATLRSVLAELAAAPGILACKASRLYRTAPVEAQGPDFVNAVAALDTTLAPLDLLDLLQALEQRHGRERPYRNAPRTLDLDLLLYGEQAIDHPRLSVPHPRMHERAFVLAPLCELVPALRLAQGDCAALLAALEDQAIEPLR
>CP025477.1|AZY32800.1|245061_246018_+|tripartite-tricarboxylate-transporter-substrate-binding-protein
MKKRIWGTLLAAAMTVGSGAAHAGYPDKAVRIVVPFAAGGGVDALARPFAKELGDILGQSIVVENKPSNTGQIGATDVARAAADGYTLLLSSAAFATTPAFYPQVPYDPVKDFSPVMIMAAAPQVLVASNRFKAASLPDVLAQARQSDRINFALSASTGIQALATAMLAGQGGVTFMTIPYKGAGAAFMDLISGEVDLMIDNPASSLVHVRAGKLRVLATTGSKRMAILPDVPTVAETLPGFEARNWFVLAAPQGTPPAVIQKLNEASARALNTPAMRQMLERDGIDLVADSPAHAAAFLQDEIAKWGKVVKEGNLQP
>CP025477.1|AZY32799.1|241548_243651_+|hypothetical-protein
MSSIEMPAPVMPIEPAELAGASPYPLAIDQDFCLIRWMAAISRACGALATVALLLMALSMCYEIFSRYLFNAPTAWATEISGYLLVATVFFGLAAAQASNSHVQVELWIDRLSAPVRLRVELLCQWLALLFCVVLGWQMASFNVREYLNDTRDWGLLSTPQWMPELAVSVGMVVFCMSILVDIYRLSPPAQAWRRWLTPALLALLAAALVALGANAVPMAAGGRFDWGMALIVAALLACAWAWSGVRTLAHVVLVVGGCAVLYGLARGQSLGWVAFLLVASMMLLLFLGVRIGVALGLVGLFGVYFLLSRPQLSLLAERAWSSTNTFTLTAVPMFIFMGGLLLRSGITAGMFDALVRWFGRAPGGLAHASAGASAVFAAVSGSSLATAATLGKVACPDMIERGYSPRLTYGVAAAGATLGILIPPSIPMIIYGTTVGASVTHLFLAGMLPGLLLMACFMLGALVWALAVPGSAPVARAYTLREKLSASRGMVPFVAIIGAVLGSMYTGVATPTEAAAIGAVSAFVLCLVRRQLSWRALFEIAHDSAKVTALLLLIVVGAGIFSWVFDYLRLPREVVNLIQGADLSPALIVAAMVLAYLVLGMFVESIAMMLMTLPVTYPIAMSLGLDPIWFGVFLVLMIELGLITPPVGMVLFVLRSMNEKARFTDIIRGALPFVLIILLFLCLIYIYPQIVMWLPQQVK
>CP025477.1|AZY32798.1|240334_241378_-|C4-dicarboxylate-ABC-transporter-substrate-binding-protein
MSQRFPLPRGFQAALAAAALCTASWSGAAAAQTYDLTMAVITSPGDGYSILTASVPERVAKATDGKVKVTVSDSLVPPAQIATAVREGRVDMSAALHTYLAADEPRMGIFNLPGLINNIQEYKQVCDAFWCEDTRKIWKDKWNAIVLAEGAWCTQQLFSKDPIHKVEDFKGKRLRVHNPQTAEVVNALGGKPVAMPTTEIFPALERGVIDGLFISTCVGGSLEFWRIAKNVQNWSLGPINGWAILANPDSWQKLPADVQKQVQGAMDALQQEAFGNYDTFVSNAQQEMMKKGVTFWVAPEEERAKLMQQQYIGPSYEAWNKRAKQVGFDGPAYLDRVRTTLGKSASN
>CP025477.1|AZY32797.1|239547_240291_-|GntR-family-transcriptional-regulator
MPFPFCNTNRMTSPAAPEGEFKVQRVASVLRHSVTESIRNAILVGRFRPGERLPERELCEMTGVSRTLVREALRQLESEGLIVVIPHRGPVVERLSPEQARGIYQVREELEGLACQLFAEHATEPQLAALQEAFQALKRALTRGTPLEQIAAKNAFYQQLLDGAGNEALTTTLRLLNSRVMLLRSTSMQAPGRAKHSVAELSNLLQALVARDGKAARKAGSLHVRNAASVAIAILQDSLADAAATAE
>CP025477.1|AZY32796.1|238115_238526_+|4-carboxymuconolactone-decarboxylase
MALRPEFQTEQFQKGLAVRRAVVGDAYVDKSLNSADDLTASLQKLVTEYCWGEVWTRPGLERKTRSFLNLAMLIALNRPNELRLHLRGAINNGVTKDEIVEVVLQAAIYCGVPAALDAMKAVREVVETMEKEGAFA
>CP025477.1|AZY32806.1|250684_251626_-|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA
MTPRAIICLAGPTAAGKSASTLALAQRWPLEIINVDSATIYRGMDIGTAKPSAAERAQVPQHLLDIRDPAQSYSAAEFRADALRLIAEIHARGRIPLLAGGTMLYYKALREGLDDLPQADPALRAELEARAARLGWPALHAELALLDPATAARLSPNDSQRIQRALEICRLAGQPMSALLQGERRGDAPSPYRYVTLSLEPSERAALHARIAQRFDAMLAAGLVEEVRGLHARPDLHPGLPSVRCVGYRQMWSYLDGDIDLDTAREQGVAATRQLAKRQLTWLRAQPERVIIDCLAGDAVARTVDAMARALPD
>CP025477.1|AZY32807.1|251622_253512_-|DNA-mismatch-repair-protein-MutL
MSDRRPIATLPDLLISQIAAGEVIERPASVLKEILENAIDAGARAIEVRLEGGGIRRIAVTDDGSGIPPEELPLALTRHATSKIRSLDELESVASMGFRGEALASIASVADLTIISRTRGAEHAWQIDGGSLQVSPASGPPGTTIDVRQLFDRVPARRKFLRSEATEFGHCVDAMERIALAHPEVAFRLFHHDRAQRQWLPADHGQRIRDVLGAEFVGHVLPVLAAAGAIALMGMVTRPTAARARADRQYLYVNGRFVRDRTVSHALRSAYADVLHGDRQPAYVLYLDIDPGAVDVNVHPAKHEVRFRDSGAVHRFVSQVVGQTLAQTGGAEAVPAGVPDGAAPDTAYAGEPAAAAPGLAEPRAPYPAAYPSPGQSPYQGSPARPHTQVPFRLHGEPAGIPATDWQSLYRPLPGDAAPAATALRAAPATPLPTADEHPLGQALAQLHGIYILAQNSRGLVLVDMHAAHERVVYEQLKRALDDRALPRQDLLVPVVFHAAEKDVALVEEHETQLNELGFEMRPSGPASIAVRSVPALLARGDIESLARAVLRDLGAVGVSRLLTEQRNELLSTMACHGSVRANRRLTLEEMNALLRQMEITERADQCNHGRPTWVQWSVNDLDKLFLRGQ
>CP025477.1|AZY32808.1|253598_254237_+|hypothetical-protein
MLDFFNMVLHIDQTLGIWVEQYGVWVYLVLFLIVFAETGLVVLPFLPGDSLLFIAGAFGATGHMDPVLTAALLIVAAISGNTVNYTIGRYIGPRVFSMNLRFLDRNALMRTHAFYEKHGGKTIVMSRFIPVIRTFAPFVAGVADMRLARFQLFNIGGALLWVISLVAAGYFFGNIPLVREHLNTIVLIGLGAAIVPVVIGALVRLLQVRRGQ
>CP025477.1|AZY36015.1|254379_255624_-|N-acetylmuramoyl-L-alanine-amidase
MRTWPADEYTRVTLELDSELKAEHFTLENPHRLVVDIEGLSVNAALNDLVSKVRHDDPYIQGLRVAQNRPNVVRLVFDLKQSVAPQVFTLKPVADYQYRLVLDLYPKVAQDPLMAILNKQSGPDVDDPLARVLDEIARNQPAPDQPAAPLARGQEPAPALPAPPIKPLPAPGRSASRKRMLTIALDPGHGGEDPGAIGRSGLREKDVVLRIARRLKTLIDAQPYMRAYLTRDDDYFVPLHVRVQKARRVRADLFVSIHADAFIKPTANGSSVFALSERGASSTQARWLADKENAADLIGGVNLGSHDRQVAKVLLDLSTTAQINDSLKVGSAFLDEIKKINRLHKNRVEQAGFAVLKAPDIPSILVETAFISNPKEEALLRSAAHQEKLAQAMMTGIDRYFTANPPLARVGDVS
>CP025477.1|AZY32809.1|255695_256232_-|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MSAPPTTLCLHLPDEAATENLARQLAPLVDGRRGGQPGGQIHLQGDLGAGKTAFTRALLRECGIQGRIKSPSYALLESYKVSNLYFYHLDFYRFSDSREWLDAGFRDLLRDDAVVLIEWPERAAGLLPPPDLLISLAYADQGRDASLTAHTARGQTWLNAIVPPPTARSLPAPPPADA
>CP025477.1|AZY32810.1|256383_257775_+|class-II-fumarate-hydratase
MKTRTEKDTFGPIEVPEQHLWGAQTQRSLHFFAISTEKMPVPLVAAMARLKRAAAKVNAELGELDPQVADAIMRAADEVIAGKWPDEFPLSVWQTGSGTQSNMNMNEVLANRASELLGGERGEGRKVHPNDHVNRGQSSNDTFPTAMHVAAAVEVEHRVLPALKALRGTLAAKSAAFYDIVKIGRTHLQDATPLTLGQEISGYVAQLDLAEQQIRATLAGLHQLAIGGTAVGTGLNAHPQFSAKVSAELAHDTGSAFVSAPNKFQALASHEALLFAHGALKTLAAGLMKIANDVRWLASGPRSGLGEISIPENEPGSSIMPGKVNPTQCEAVTMLAAQVMGNDVAINVGGASGNFELNVFKPLVIHNFLQSVRLLADGMVSFDKHCAAGIEPNRERITELVERSLMLVTALNPHIGYDKAAQIAKKAHKENLSLKEAALALGHLTEAQFAEWVVPGDMTNARR
>CP025477.1|AZY32811.1|257791_258772_-|AEC-family-transporter
MSENSSLRRDAEAPLLSIFLPGSMSVALLVLPDFMLVALGWALRHKLGFSREFFAGTERMVYFVLFPALLFQSILRTPISAGHAMQLLQATAALMACGVALAWLAGPVLRPAPVALASAAQCGYRFNTYIGLALAASLAGGPGQTIMALIVGFAVPMANVAAVYGLARHSGNGLLRELARNPLLVSTLLSLACNLAGLSLPGPIDTVMARLGAAALALGIMCVGASLAWEGGKGHGRLIGWMLAVKLAAMPSAALGIAWALGLPALETRMLVLFSALPTASAAYVLAMRMGGDGRMVAVLISLGTLASAATIPLWLTAAAGLGAPN
>CP025477.1|AZY32812.1|258907_259891_+|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE
MNKVRTLVQAIAVATGLVAAAGAQAADAYPSKAIRVIVPFAPGGSTDIIARLVTQRMSQELGQPMVVENKGGAGGAIGASEAARAEPDGYTLSIATVSTMAVNPACRPKDLPYDPIKDFQPVTNFANTANVVAVNPKFPAKDFKGFLEELKKNPGKYSYGSSGTCGVLHLMGESFKMATGTDIVHVPYKGSGPAVADAVGGQIELIFDNLPSSMPQIQAGKLRAMAIAWPTRIDAIKDVPTFADAGFPVLNQPVWYGLLAPKGTPMDVVNKLRDAAVVALKDPKVIKALDDQGSAPSGNTPEEFAKEIKEQYDWAQDVVKKQNIKLD
>CP025477.1|AZY32813.1|259955_260855_-|LysR-family-transcriptional-regulator
MRLRHIEIFEAIRRTGSLTEAAAALHISQPAASKLLAHAEAQLGFKLFERVKGRLVATREAEILAPEVARLNQDLGSVRRLAASLRDRPHGHLRLGCAPALGLGLLPGVVRASRDAQPGITFDIHTHHSAELVQGLLAHELDLAITFDANNHPGLTRTSLGHTELVHLSRLPGAGTTRLQELGGETLIVLDARDASGSLLQMALDAQGLAPRVAIQVQTHYVACALAEAGCGDAVVDAITARAMLRPGMALRRLEPALRVPISVMTRSQDALSTLHHDFIERLRQACSVLQAQPAPQPE
>CP025477.1|AZY32814.1|260961_262716_+|gamma-glutamyltransferase
MPLRTLLAALCAAAICQAPAWAREAPGVAREDVNPEIASARSERAQAHAQRYMIATANPLASEAGYRILRAGGSATDAIIAAQLVLNLVEPQSSGIGGGAFMVHYDRGAGELRVYDSRETAPAAARPDRFLREGKPLSYAESVNNGRAVGTPGLLRGLELAHRQHGKLPWQALFEPAIAMAEQGFAVSPRLHESIAGDKALAAQPAAARYFYGPDGQAWPVGHRLRNPEFAATLRSIAREGADAFYRGPIARDIVAAVRAHPTPGDLAEADLAGYRAVVREPVCGLYRGYRLCGAPPPSSGPLAVLQMLGELEQYPLARMRPGSVEAVHYFSEAGRLAFADRDFYVADPAFVDVPVRALLDPAYLRQRGALIRPDRSMKTALPGDPQGLLAERARDDAIEVPSTSHLVAVDAAGNVVSMTSTIEAAFGSKIFVRGFLLNNEMTDFSSSYRDPEGRLVANRVEPGKRPRSSMAPMIVFRAGKPVLALGSPGGSAIINYVAKTLVGVLDWKLDVQQAIALPNLGSRNKETELERGTALEALAPALRRMGHEVRITDFPSGIQGIVIGPHGLAGGADPRREGLALGD

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Crispr_ID: CP025477_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025477_2

432033-432126

Orphan

Consensus_repeat	Method
GTGCCTGTCCCCGCCGGGACAGGCAC	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of CP025477_2

>merge|CP025477|2|432033-432126|CRISPRCasFinder
GTGCCTGTCCCCGCCGGGACAGGCACCCGGGCCCAGGAAAACCCCCACGCTGCGCCCGCTGTGCGGGCGTGCCTGTCCCCGCCGGGACAGGCAC

>CP025477|2|2|432033-432126|CRISPRCasFinder
GTGCCTGTCCCCGCCGGGACAGGCAC	CCGGGCCCAGGAAAACCCCCACGCTGCGCCCGCTGTGCGGGC
GTGCCTGTCCCCGCCGGGACAGGCAC

Protein	Signature genes	Signature genes Name	Protein_function
CP025477.1\|AZY32960.1\|419372_420431_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133030
CP025477.1\|AZY32968.1\|431403_431802_-\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|234569
CP025477.1\|AZY32966.1\|427142_427877_-\|DNA-polymerase-III-subunit-epsilon	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|235574
CP025477.1\|AZY32975.1\|439209_439995_+\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|181723
CP025477.1\|AZY32976.1\|440061_441033_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270234
CP025477.1\|AZY32973.1\|437033_437789_+\|TerC-family-protein	unknown	unknown	gnl\|CDD\|223930
CP025477.1\|AZY32965.1\|426553_426733_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377342
CP025477.1\|AZY32967.1\|430321_431272_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025477.1\|AZY32971.1\|433215_434616_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
CP025477.1\|AZY32970.1\|432771_433116_-\|TIGR01244-family-phosphatase	unknown	unknown	gnl\|CDD\|225984
CP025477.1\|AZY32962.1\|421147_422125_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025477.1\|AZY32964.1\|423522_425034_+\|TRAP-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270238
CP025477.1\|AZY32977.1\|441043_442021_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176106
CP025477.1\|AZY32978.1\|442146_443319_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173841
CP025477.1\|AZY36025.1\|425049_426363_-\|short-chain-fatty-acids-transporter	unknown	unknown	gnl\|CDD\|224942
CP025477.1\|AZY32963.1\|422320_423526_+\|sodium/glutamate-symporter	unknown	unknown	gnl\|CDD\|129314
CP025477.1\|AZY32974.1\|437984_439217_+\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
CP025477.1\|AZY32972.1\|436404_436923_-\|MgtC/SapB-family-protein	unknown	unknown	gnl\|CDD\|224204
CP025477.1\|AZY32961.1\|420560_421055_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP025477.1\|AZY32969.1\|432212_432683_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180

Protein	Function_ID	Function_description	E-value
CP025477.1\|AZY32960.1\|419372_420431_-\|glycosyltransferase	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	4.18053e-89
CP025477.1\|AZY32968.1\|431403_431802_-\|GTP-binding-protein	gnl\|CDD\|234569	PRK00007, PRK00007, elongation factor G; Reviewed.	1.37761e-90
CP025477.1\|AZY32966.1\|427142_427877_-\|DNA-polymerase-III-subunit-epsilon	gnl\|CDD\|235574	PRK05711, PRK05711, DNA polymerase III subunit epsilon; Provisional.	2.40573e-142
CP025477.1\|AZY32975.1\|439209_439995_+\|enoyl-CoA-hydratase	gnl\|CDD\|181723	PRK09245, PRK09245, crotonase/enoyl-CoA hydratase family protein.	5.15941e-155
CP025477.1\|AZY32976.1\|440061_441033_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270234	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) proteins present in a number of bacterial species, but mainly in proteobacteria. In eubacteria, at least three families of periplasmic binding-protein dependent transporters are known: the ATP-binding cassette (ABC) transporters, the tripartite ATP-independent periplasmic transporters, and the tripartite tricarboxylate transporters (TTT). Bug proteins are the PBP components of the TTT. Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	2.06741e-117
CP025477.1\|AZY32973.1\|437033_437789_+\|TerC-family-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	1.14565e-78
CP025477.1\|AZY32965.1\|426553_426733_-\|hypothetical-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	0.00323203
CP025477.1\|AZY32967.1\|430321_431272_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.02206e-23
CP025477.1\|AZY32971.1\|433215_434616_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	3.43796e-109
CP025477.1\|AZY32970.1\|432771_433116_-\|TIGR01244-family-phosphatase	gnl\|CDD\|225984	COG3453, COG3453, Uncharacterized protein conserved in bacteria [Function unknown].	3.40043e-35
CP025477.1\|AZY32962.1\|421147_422125_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.0826e-23
CP025477.1\|AZY32964.1\|423522_425034_+\|TRAP-transporter-substrate-binding-protein	gnl\|CDD\|270238	cd13520, PBP2_TAXI_TRAP, Substrate binding domain of TAXI proteins of the tripartite ATP-independent periplasmic transporters; the type 2 periplasmic binding protein fold. This group includes Thermus thermophilus GluBP (TtGluBP) of TAXI-TRAP family and closely related proteins. TRAP transporters are ubiquitous in prokaryotes, but absent from eukaryotes. They are comprised of an SBP (substrate-binding protein) of the DctP or TAXI families and two unequally sized integral membrane components. Although TtGluBP is predicted to be an L-glutamate and/or an L-glutamine-binding protein, the substrate spectrum of TAXI proteins remains to be defined. A sequence-homology search also shows that TtGluBP shares low sequence homology with putative immunogenic proteins of uncharacterized function. The substrate-binding domain of TAXI proteins belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and tworeceptor cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.13066e-82
CP025477.1\|AZY32977.1\|441043_442021_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176106	cd08414, PBP2_LTTR_aromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of aromatic compounds and that of other related regulators, contains type 2 periplasmic binding fold. This CD includes the C-terminal substrate binding domain of LTTRs involved in degradation of aromatic compounds, such as CbnR, BenM, CatM, ClcR and TfdR, as well as that of other transcriptional regulators clustered together in phylogenetic trees, including XapR, HcaR, MprR, IlvR, BudR, AlsR, LysR, and OccR. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the substrate-binding domains from ionotropic glutamate receptors, LysR-like transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	2.33368e-60
CP025477.1\|AZY32978.1\|442146_443319_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173841	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26. Putative acyl-CoA dehydrogenases (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	4.27565e-82
CP025477.1\|AZY36025.1\|425049_426363_-\|short-chain-fatty-acids-transporter	gnl\|CDD\|224942	COG2031, AtoE, Short chain fatty acids transporter [Lipid metabolism].	6.57351e-166
CP025477.1\|AZY32963.1\|422320_423526_+\|sodium/glutamate-symporter	gnl\|CDD\|129314	TIGR00210, Sodium/glutamate_symport_carrier_protein, sodium--glutamate symport carrier (gltS). [Transport and binding proteins, Amino acids, peptides and amines].	1.2444e-106
CP025477.1\|AZY32974.1\|437984_439217_+\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	8.36236e-118
CP025477.1\|AZY32972.1\|436404_436923_-\|MgtC/SapB-family-protein	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	1.12064e-44
CP025477.1\|AZY32961.1\|420560_421055_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.34959e-07
CP025477.1\|AZY32969.1\|432212_432683_-\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	9.38587e-30

>CP025477.1|AZY32968.1|431403_431802_-|GTP-binding-protein
MTRRTSIERYRNIGISAHIDAGKATTTERILFYTGITHKLGEVHEGAATMDWMEQEQGRGITITSAATTAFWRGMAGNYPEHRINIIDTPGHVDFTIEVERSMRVLDGACMVYDSVGGVQEVATVMVVLPGQ
>CP025477.1|AZY32967.1|430321_431272_+|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDKYNLLTVHS
>CP025477.1|AZY32966.1|427142_427877_-|DNA-polymerase-III-subunit-epsilon
MRQIIFDTETTGLDPAQGHRIVEIGCVEIVNRMVTGNNLHLYLNPDRDSDPEALAVHGLTTEFLADKPRFAEVAEQFLAFIADAELIAHNAAFDVKFFNAELQRIGRDPLNTHCENIVDSLLHARSLHPGKRNSLDALCDRYGISNAHRTLHGALLDSQLLAEVWLAMTRGQDALLIDVDDQGANANGALVLGKFDASVLTVLAASEAELAEHAAYLQALDKAVGGACAWRAIEPLPAESGQPG
>CP025477.1|AZY32965.1|426553_426733_-|hypothetical-protein
MHPDTNTMLIIIAAAVALMIVGFGLRDRNLGLGLLGIGLIAALATIAYKAYITFNSFYY
>CP025477.1|AZY36025.1|425049_426363_-|short-chain-fatty-acids-transporter
MFKLMSRSAVKMVERYLPDPYVFVVLLTLVAAGAAMIIEGQTPMAVVRWWGNGFWGLLTFAMQMLLVLVTGYMLASTPLVKRMLARLASLATSAGGAIILVSVVSLAASWINWGFGLVVGALFAKQIARQVRVDYRLLVASAYSGFIIWHGGLAGSIPLTIATEGHFSADKIGIIPTGDTIFAVFNLVIVVAMFILVPLVNRLMLPDEKESVYVDPARLEEASVPASDDDKRPAARLENSRLLAWLIAAGGLAYMFDYYVVRGAGLNLNVINFSFLILAILLHGTPRRLLASLDEAIKGGAGIVIQFPFYAGIMAIMMDSGLAATLSEWFVSIASAATLPFWTFISAGIVNIFIPSGGGQWAVQSPIVISAAQALGADMPRVAMAVAWGDAWTNMLQPFWALPVLAIAGLKAKDIMGYCIIQLLVTGVIISVGLSFF
>CP025477.1|AZY32964.1|423522_425034_+|TRAP-transporter-substrate-binding-protein
MTMFIRWLILSACLLLAACSRAPDTEILQRDVGQTLAATYGPDLFDIVALRRMGSATDSTAPPGQTRRVVYYDVVLGLKKDLTLGAWDQPGAAALVSLLGAGPRSISGVKSSGNAAGDQIVAHASAIYQRDAEQWVHVAPASFTATEAPSLDTGAPPPVTRQLLQTLEQITRSVPYSASSTAQHVVQQELERSVARINGRLARLQKGYPLATGPDKGEYLAFGQALAAIGRNEQVRVIPLITGGSADNMAMLRSGAAVAALSQADIAQLAYEGKGPFESQGPFSGLRALGSLYPELVHIVVRQGDGIATVGALRGKKIALGPSGSAVRTTLETVLAAHGLQPGRDYAVIDTPAAAALPQLSEGRVDAVAQVIGTPAAPLRAALTQARLALLPLDRAAIDKLVQADPTLMALDIPANTYPSQAAAIPTVGMAALLVTTADLTRDEAAHMVDVVYRAGQDLLAAGSAQGAQVSAANAGRGLSIPLHDGAVEAFEKLGAPPLPEGR
>CP025477.1|AZY32963.1|422320_423526_+|sodium/glutamate-symporter
MISLTPVQSLLACCLVLVAGRILTTRIGVLSRYSIPDPIVGGLLFAVLATALDTWGGIQISLETNIKPTLLLIFFGCIGLTADLKLLARGGPRLIAFLLALIPFLVLQNAVGLGLAWLLDMHPLMGLIGGTITLVGGHGTGAAYAARFADINNIQDVMALAMTAATIGLVLGGIIGGPVAEWLIRRHKLDPRMAGKDANQVLPEVETTAEAPTATSFITSLTAVFVTVVVGTYLAGLVEDAPISLPNFLWCLATGAIIRNFGGYVGIRLDDRVSEIIGSISLSLFLGLTMMTLDLSSVVRLAGPLALMLVAQALVCALYAGWAVFRMLKRDYEAAVMAAAFCGFAMGATATAIANMQALTRRHGPAPESFIVVPVTGAFLVDILNVIVLTSLIALPFVGGM
>CP025477.1|AZY32962.1|421147_422125_+|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHSYMVRADLAG
>CP025477.1|AZY32961.1|420560_421055_+|GNAT-family-N-acetyltransferase
MPQSYIVRTMRPADVEAVLRVQAAVYPASLLESAALFQNRIEIAPATCQVALDGQDLIGYLIAYPWDAGLPPALDRSLERLPGAADTWFVHDCAVLPAAQGGGVAAALLAGGRAQARRLGLRRASLVALAQAVGYWLRHGYQPLADSDALRAKLAGYGDGARYM
>CP025477.1|AZY32960.1|419372_420431_-|glycosyltransferase
MFMYTEFRSQLLAGAGTSAAGQSARMAVLAGDGATGVQVSCVVPGLNEAANLRVLVPALRACLEQWCASWEIIVVDDGSTDDTAELMAQWSAVEGIRYVQLSRNFGKEAALTAGLEAADGDAVICLDADMQHPPELIGDMLAAWRNGADMVYAVRRQRDDEPWFKRVGARAFYRLLSTARGVEVPPHAGDFRLMDRRVVEALVALPERTRFMKGLYAWVGFKSQAVPYTPQARRHGASHFSAWKLFRLACDGLTAFTTWPLRLVSLIGVLFALLSLSYGGYLVADYLISGNAVSGWTTIVTALLFFAGINLISLGVVGEYVARIFDEVKGRPLFIARQRRGRAKRAAKARSQ
>CP025477.1|AZY32969.1|432212_432683_-|universal-stress-protein
MFKKILIPTDGSPLSAQAANAGICFARSTGAEVVALHVTQPFAATIGFDGMAAAYAITDEDYEKASAEQAEKYLKLILDRAETAGVKAESRAVSNFNVADGIVQAAGEAGCDLIFIGSHGRSGLSRLLLGSVTAKVLSLAHTAVLVYRVKEDKDKK
>CP025477.1|AZY32970.1|432771_433116_-|TIGR01244-family-phosphatase
MSAAIKPLTENFAVAPQLGPADMADVAAAGYKSVIINRPDFEGGPDQPTAADVSQAAQALGLQVEYQPVVGSAMTAADVARFAELLRTMPGPVLAYCRTGTRCTNLFAAAQQLG
>CP025477.1|AZY32971.1|433215_434616_-|PLP-dependent-aminotransferase-family-protein
MRQADATLVTQLADDLARRIDEHGLRPGTRLPSIRRMAEQSGVSRFTVVEAYDRLVARGLVQSRHGAGFFVRARSASLTALASARVPQAAPETPVRVDVSWLLRNMFRETAAGMPGGAGLLPPEWLDPDMVAAAVRAVGRTVRGNLVSYGSPQGYAPLRQQLASMLQADGVPAHPERNLLTTNGVTHGLDIVARHLIKPGDTVLVEDPAWFVIFGRLAAFGARPVGVPRGPDGPDLAMLDRLAAEHKPRLYIINGAVHNPIGHTLSAGAAYDILRLAERHDFMVVEDDTYADLHPGGAMKLAALDRLERVILVGGFSKMLAASLRVGYIAAGAETLQRLTDLKMLAGLTSPELGERVVHRVLVEGQYQRHIERVRARVNEARLRSIQALQQLGLSVPHEPHAGMFVWADCGRDSEPVARNAAERGMLLAPGTLFSPSGAPSTMLRFSVAMVDTPGIWQSIAAVMAQ
>CP025477.1|AZY32972.1|436404_436923_-|MgtC/SapB-family-protein
MDTVWMEIWTTVRNEFADIPDVAEATRIVLRLGMAVALGGLLGYERERSGKAAGLRTHMLVALGAALFVLVPLQGGMEVGDLSRVLQGVIAGIGFLGAGVIIKLGNEGEIRGLTTSAGIWLTAAIGVAAGMGREATALASTLIALFVLAALRRLEKRIAARDDKRVVAQPPP
>CP025477.1|AZY32973.1|437033_437789_+|TerC-family-protein
MDYLVSLAQQPAAWAALATLIAMEVVLGIDNLIFISILTNKLPPQHQTKARRIGIGMALILRLALLGTVAFIVQLTQPVFELFGHGFSWRDVILVAGGLFLVWKATKEIHHHVDPNPGDDMFGGKAATLGFAAAVAQILMLDLVFSIDSIITAVGMTEHIPIMFVAVIVAVAVMLLAAEPLARFIERNPTVVMLALAFLMMIGMTLIAEGFGAHVPKGYIYAAMAFSALVEGLNMMARRAREGRGAGAAGG
>CP025477.1|AZY32974.1|437984_439217_+|CoA-transferase
MSGPLEGVRILDVTTVLMGPYATQILGDLGADVIKVEPPAGDNVRGIGPGRHADMGGIFLHANRSKRSIALDLKNPAGREALLKVAATCDVLVYNVRPQAMARLGLSYAEVAQANPSILYVGMYGYDQRGPYAARAAYDDLIQGAVGIPSLSVEAGSDIPRYAPSAMVDRIVGISAANAVTAGLYHRARTGQGQAIDVPMFETMAHLILGDHMMGQTFEPPLGPPGYPRILNADRRPYATRNGHICVLLYADKHWKAFFELIGQPGRDAADPRFRDIGTRTQHIHAIYRLVSDAIASRTTEEWLAAFEAADIPAMPVHTMASLLRDPHLEAIGFFGMVDHPSEGAVRMMAVPSRWSGTPPQPRGHAPRLGEHSVDVLKEAGYDDEAIAALVRNGAAIAAARQLPEGTDHD
>CP025477.1|AZY32975.1|439209_439995_+|enoyl-CoA-hydratase
MTDFLRHERHGGVLLLTMDRERTRNALSDADAVEALVQACARIGADLSVRAVVLTGSHGVFSSGGNLKTLSDTVGAGLGEPVHSLQAYRSGIQRIPLALYNLEVPTIAAVNGPAIGAGCDLACMCDIRLAARQASFAESFVKLGLTPGDGGAWLLPRIVGMSRACELAFTGRSIDAARARELGLVSEVFDADALLPAALALAQEIAQHSGHALRLTKRLLREGQHTRLDTLLELSAGFQALAHHTQEHAGALDAHLSRKRG
>CP025477.1|AZY32976.1|440061_441033_+|tripartite-tricarboxylate-transporter-substrate-binding-protein
MHSRTLALALLSVAALAQGGSARAASDYPAHPVKIIVSLPPGSGADTTARFLSKHLAERFKQPFVVENRPGGNSFIAAQAVATAPPDGYTLFVASNSPMTTNAAVFKNLPYDAVKDFAPVAPIARFPMALVVPANSPYRSVADLVAAARAAPGQLNFASGTATYQVVLELFHEQNGIKATHVPYKGTSAALADVAGGVVQYSVADVSAALPLIRGGKLRPLAVTSTRRIKDLPDVPTMQESGNKGFEAYAWTAAFFPAKVDPAIVARVSDAVQALVRSQEGKAFMEQLGGEPFVGGPDTLAAFQRDELASMRRIAKLANIQQE
>CP025477.1|AZY32977.1|441043_442021_-|LysR-family-transcriptional-regulator
MWTGQYIVHIASPAHHWRRAVELRQLKQLLVLSETLNFHRAAERLHMAQPPLSTAIKKLEQELGVQLFERLPAGLQPTPAAEVVLRYARATLFYADEIQRAAQEGASGKQGMLKVGFVGSSIYSLMPQLLSAFRKDYPRVDLVIEESTTVDLLRRLDAHTLDVALVRFPVLEPSTARITLLQADHLMLAVPAGSRYAQRDDVALDELADEPFIGYSRTHVPGMHALIMYAFQQYGVVPHIAQEAIQVQTILSLVESGLGLAIVPKVACRQAGSGVRLVNVPQLAETIKVGIALAVHPDNATPTTANFVDMACRLMQTEPAAGQAR
>CP025477.1|AZY32978.1|442146_443319_+|acyl-CoA-dehydrogenase
MGAILGTIIEALQLAAIPAHDEALRPAVRAFLDEALREMPADRRARSWMGHDAEFSRALARQGWLGLTLPVEYGGAGRSNFARFVLSEELLAVGAPVSAHWVADRQTAPLILRFGSPAQRAFYLPRIIRGEAFFAIGMSEPDTGSDLASVRTRATPVADGWLLNGRKIWTTNAHRSHYMCALVRTSGAPEDRHRGLSQMIFDLALPGIEIRPIRDIAGDAHFCEVLFDNVLLPHDALVGEEGSGWRQVMAELALERSGPERIYSSMVLLDGWLAHLRCDAAPQRAQVCLAGRLAARLAVLRSMSLAVSQRLEQGADASLAAVLVKDLGTEFEQAVPELIGQALHASPQPAPDDVLMRTLAYLTLINPTFSLRGGTRHILRGIIARELGLR

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Crispr_ID: CP025477_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025477_3

995302-995396

Orphan

Consensus_repeat	Method
TAAAAGGGCACCCGCAAGGGTGTCCTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025477_3

>merge|CP025477|3|995302-995396|CRISPRCasFinder
TAAAAGGGCACCCGCAAGGGTGTCCTTTTATTGCGAAAAGATATCTGGAAGAAAGCCTTTTCAGAGTAAAAGGGCACCCGCAAGGGTGCCTTTTT

>CP025477|3|3|995302-995396|CRISPRCasFinder
TAAAAGGGCACCCGCAAGGGTGTCCTTTT	ATTGCGAAAAGATATCTGGAAGAAAGCCTTTTCAGAG
TAAAAGGGCACCCGCAAGGGTGCCTTTTT

Protein	Signature genes	Signature genes Name	Protein_function
CP025477.1\|AZY33453.1\|993676_994549_-\|multidrug-DMT-transporter-permease	unknown	unknown	gnl\|CDD\|274527
CP025477.1\|AZY33457.1\|997321_998371_+\|NADP(H)-dependent-aldo-keto-reductase	unknown	unknown	gnl\|CDD\|381320
CP025477.1\|AZY33447.1\|981991_983818_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173842
CP025477.1\|AZY36048.1\|989464_990373_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
CP025477.1\|AZY36049.1\|998508_999525_-\|IS110-family-transposase-IS1663	unknown	unknown	gnl\|CDD\|376773
CP025477.1\|AZY33451.1\|991860_993135_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|275263
CP025477.1\|AZY33452.1\|993288_993669_+\|hypothetical-protein	unknown	unknown	unknown
CP025477.1\|AZY33458.1\|1001033_1001606_-\|chorismate--pyruvate-lyase	unknown	unknown	gnl\|CDD\|225703
CP025477.1\|AZY33449.1\|984731_985766_+\|sulfate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224529
CP025477.1\|AZY33446.1\|980818_981748_+\|electron-transfer-flavoprotein-subunit-alpha	unknown	unknown	gnl\|CDD\|224936
CP025477.1\|AZY33462.1\|1008801_1009053_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
CP025477.1\|AZY33460.1\|1004173_1007353_+\|multidrug-efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|273335
CP025477.1\|AZY33461.1\|1007349_1008732_+\|multidrug-transporter	unknown	unknown	gnl\|CDD\|273830
CP025477.1\|AZY33456.1\|996266_997217_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025477.1\|AZY33450.1\|987602_988667_+\|sulfate/thiosulfate-import-ATP-binding-protein-CysA	unknown	unknown	gnl\|CDD\|213263
CP025477.1\|AZY33459.1\|1001665_1002397_+\|rRNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|224108
CP025477.1\|AZY33448.1\|983900_984542_+\|peroxiredoxin	unknown	unknown	gnl\|CDD\|239314
CP025477.1\|AZY33455.1\|995445_996171_+\|CoA-pyrophosphatase	unknown	unknown	gnl\|CDD\|239518
CP025477.1\|AZY33454.1\|994854_995235_+\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
CP025477.1\|AZY36050.1\|1002448_1003366_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114

Protein	Function_ID	Function_description	E-value
CP025477.1\|AZY33453.1\|993676_994549_-\|multidrug-DMT-transporter-permease	gnl\|CDD\|274527	TIGR03340, phn_DUF6, phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.	3.74356e-26
CP025477.1\|AZY33457.1\|997321_998371_+\|NADP(H)-dependent-aldo-keto-reductase	gnl\|CDD\|381320	cd19094, AKR_Tas-like, Escherichia coli Tas protein and similar proteins. Escherichia coli Tas protein is the prototype of this family. It is an NADP(H)-dependent aldo-keto reductase that catalyzes the reversible reduction of ketones to the respective alcohols using NADP(H) as a hydride donor.	0
CP025477.1\|AZY33447.1\|981991_983818_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173842	cd01153, ACAD_fadE5, Putative acyl-CoA dehydrogenases similar to fadE5. Putative acyl-CoA dehydrogenase (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	6.94362e-153
CP025477.1\|AZY36048.1\|989464_990373_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP025477.1\|AZY36049.1\|998508_999525_-\|IS110-family-transposase-IS1663	gnl\|CDD\|376773	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS116, IS110 and IS902. This region is often found with pfam01548. The exact function of this region is uncertain. This family contains a HHH motif suggesting a DNA-binding function.	2.74666e-23
CP025477.1\|AZY33451.1\|991860_993135_+\|radical-SAM-protein	gnl\|CDD\|275263	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B. Members of this family are the downstream member (B) of a pair of tandem-encoded radical SAM enzymes. Most of these radical SAM gene pairs have an additional upstream regulatory gene in the MarR family. Examples of high sequence identity (over 96 percent) from cassettes in several Treponema species of the oral cavity to those in multiple Firmicutes in the gut microbiome suggest recent lateral gene transfer, as might be expected for antibiotic resistance genes. The function is unknown.	4.71758e-24
CP025477.1\|AZY33458.1\|1001033_1001606_-\|chorismate--pyruvate-lyase	gnl\|CDD\|225703	COG3161, UbiC, 4-hydroxybenzoate synthetase (chorismate lyase) [Coenzyme metabolism].	1.05194e-17
CP025477.1\|AZY33449.1\|984731_985766_+\|sulfate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224529	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism].	0
CP025477.1\|AZY33446.1\|980818_981748_+\|electron-transfer-flavoprotein-subunit-alpha	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	1.05379e-120
CP025477.1\|AZY33462.1\|1008801_1009053_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	2.42408e-12
CP025477.1\|AZY33460.1\|1004173_1007353_+\|multidrug-efflux-RND-transporter-permease-subunit	gnl\|CDD\|273335	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate].	0
CP025477.1\|AZY33461.1\|1007349_1008732_+\|multidrug-transporter	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	9.9815e-102
CP025477.1\|AZY33456.1\|996266_997217_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.66858e-23
CP025477.1\|AZY33450.1\|987602_988667_+\|sulfate/thiosulfate-import-ATP-binding-protein-CysA	gnl\|CDD\|213263	cd03296, ABC_CysA_sulfate_importer, ATP-binding cassette domain of the sulfate transporter. Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	3.07125e-165
CP025477.1\|AZY33459.1\|1001665_1002397_+\|rRNA-pseudouridine-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	7.73356e-72
CP025477.1\|AZY33448.1\|983900_984542_+\|peroxiredoxin	gnl\|CDD\|239314	cd03016, PRX_1cys, Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes and lung. The seed-specific plant 1-cys PRXs protect tissues from reactive oxygen species during desiccation and are also called rehydrins.	3.35179e-132
CP025477.1\|AZY33455.1\|995445_996171_+\|CoA-pyrophosphatase	gnl\|CDD\|239518	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes. The need of CoAses mainly arises under conditions of oxidative stress. CoAse has a conserved Nudix fold and requires a single divalent cation for catalysis. In addition to a signature Nudix motif G[X5]E[X7]REUXEEXGU, where U is Ile, Leu, or Val, CoAse contains an additional motif upstream called the NuCoA motif (LLTXT(SA)X3RX3GX3FPGG) which is postulated to be involved in CoA recognition. CoA plays a central role in lipid metabolism. It is involved in the initial steps of fatty acid sythesis in the cytosol, in the oxidation of fatty acids and the citric acid cycle in the mitochondria, and in the oxidation of long-chain fatty acids in peroxisomes. CoA has the important role of activating fatty acids for further modification into key biological signalling molecules.	5.50907e-72
CP025477.1\|AZY33454.1\|994854_995235_+\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	1.34063e-62
CP025477.1\|AZY36050.1\|1002448_1003366_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.56316e-67

>CP025477.1|AZY33454.1|994854_995235_+|50S-ribosomal-protein-L19
MNLIAILEQEEIARLTGGNAVTEFAPGDTVVVSVNVVEGTRKRVQAFEGVVIAKRNRGLNSSFIVRKISSGEAVERTFQLYSPQIAGIEVKRRGDVRRAKLYYLRSRSGKSARIKEKLVLKKAKSA
>CP025477.1|AZY33453.1|993676_994549_-|multidrug-DMT-transporter-permease
MSYTSLILVVLAAMAHAAWNLLAKRAAMVGPMFVFAYGLAATILYAPWVIWVLAHDGMVWSWPVVLCILASSMLHLGYSLCLQRGYQVADLSVVYPIARGTGPLLSTMGAFTLLSEPATTTGIAGMLCVVGGVLLIATQGRLGMFRQAQAWIGVRWGVVIGLFIAAYTVVDAYGVKILLIMPVLFDWFTCATRTLMMTPHVLRRRAQYWPAMRGYWHLAIAVGVLSPLGYILVLYALRNGAPLSLVAPAREMSMMLGTLAGMFLLREKVGIGRLAGCLAILAGVVLLGSS
>CP025477.1|AZY33452.1|993288_993669_+|hypothetical-protein
MTIATTLDAATSLPTAVPGRTLGALRRLARAWAGAAVPQRKWPFPPTPPGQAQPCTPCTDSQPRSVQAVQPAQARALHAQAELSGAATQAATQVLSTKAKIIDVLLVAVWGAMIPALMWLGAAGGF
>CP025477.1|AZY33451.1|991860_993135_+|radical-SAM-protein
MASTEHSFSAGFGSPAAAPAALRGRGAVTNVPHRFQQADRVRVDDGWANPDYTAGSDAAALPSVAEALGQGGRRAIPIAVEGADASPNTCAQAPAPRTIVQAEEARKMLSRNDSPDIPFDVAANPYRGCEHGCVYCYARPTHAYLGYSPGLDFETRLVAKANAVAALRAELARPGYRASPINIGSATDAYQPIERTWRLTRGMLELLLQTRHPLTVVTKNALVERDLDLLQDLARQKLVTVFVSITTLDAAMARTLEPRASAPYRRLQTVRTLAQAGVPVGVLVAPVIPFINDESLEHILQEASAAGACYASYTVLRLPWEVKEVFETWLQAHFPDRAQRVLHRIEDLRNGRRNDTAFGSRMRGTGIWADLLRQRFALATRKLDLNRHRPELDTHRFVPPLEPGLPPARGRREARAQPGQLALF
>CP025477.1|AZY36048.1|989464_990373_+|sulfate-adenylyltransferase-subunit-CysD
MSAVMTRSHLDWLESEAIFILREVAAECARPALLFSGGKDSVVLLRLAEKAFRPGRFPFPLLHIDTGHNYDEVISFRDARAAELGETLLVRSVEDSIARGSVALRRETDSRNAAQAVTLLEAIEELGLDACIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWNLFNTRVHRGENMWVFPISNWTELDVWQYIQRERLALPSIYYSHTREVVRRKGLLVPVTRLTPPAEGETVEQLAVRFRTVGDISCTCPVASDAADPAAIIAETAVTDITERGATRMDDQTSEASMERRKREGYF
>CP025477.1|AZY33450.1|987602_988667_+|sulfate/thiosulfate-import-ATP-binding-protein-CysA
MSIEVRGLSKRFGAFRALDEVSLHIETGELVALLGPSGCGKTTLLRIIAGLESADAGSVLFAGEDATEVDVRQRQVGFVFQHYALFKHMTVFENVAFGLRVRHRSQRPSEARIRAKVLDLLGLVQLDWLADRYPAQLSGGQRQRIALARALAVEPRVLLLDEPFGALDAKVRKELRRWLRRLHDELHVASVFVTHDQEEALEVTDRVVLMNAGRIEQVGSPREVWERPATPFVYGFLGDVNQLHGHATRGVWRLGEVALPAPDLPEADNQRAIAYVRPHDIDLARAGTAAPGIPVRLNHVYLAGPSAYLELARQDDQAIIEAQVPEPLFRSLGLKEGEALLAQPRRARVFAVQP
>CP025477.1|AZY33449.1|984731_985766_+|sulfate-ABC-transporter-substrate-binding-protein
MPRNTAGIRGAIVALATVFSLGLPWAVQAQDKQTLLNVSYDPTRELYRAVDEAFIKEYQARAGVDLTVRQSHGGSGRQARSVIDGLDADVVTLALAYDIDAIADRGLLPQDWQKRLPRNSSPYTSTIVFLVRKGNPRQIHDWDDLVKDGVQVITPNPKTSGGARWNYLAAWAYALARNEGSEAKAREFVGQLLSHVPVLDTGARGSTTTFVERGVGDVLLAWENEAFLAREELGPDKFDIVVPSLSILAEPPVAVVDKVVDRKGTRAAAQAYLEYLYTPAAQEIIARNFYRPTDAGVAAKYASRFPKLKLVTIDDPIFGGWRKAQKDHFSDGGTFDQVYQPQRK
>CP025477.1|AZY33448.1|983900_984542_+|peroxiredoxin
MGQLRLGDTAPDFEQKSSIGPLRLYDYLGDSWGVLFSHPADFTPVCTTELGYTAKLAGEFAKRNVKVLALSVDPVDSHTKWIDDINDTQSTTVNFPILADDDRKVSELYDMIHPNANATLTVRSVFVIDPAKKVRLTITYPASTGRNFDEILRVIDSLQLTDSHSVATPVNWKDGEDVIIVPSLKDEAVIKEKFPKGYKALRPYLRITPQPNK
>CP025477.1|AZY33447.1|981991_983818_+|acyl-CoA-dehydrogenase
MTYATPLQDFRFALNELAGLEEILKLPGFEEVTPDLVDAILEENARFVQQAIAPLNVAGDTKPPVWNDGQVTTTPGFSQGFADYTAGGWQGLQHPQKWGGQGLPKVVAAPAGENIQAASLAFSLCPMLTDGVIEALLTVGSEAQRQTYVPKLIGGQWTGTMNLTEPQAGSDLAQVATRAVRQDDGSYRLSGQKIFITYGEHDLAENIIHLVLARTPDAPAGVKGISLFIVPKYLVNEDGSRGKRNDVWCASLEHKLGIHGSPTAVLLYGAGKGEVGEGAVGYLVGEANRGLEYMFIMMNAARYSVGQQGIGVSERAYQHAQAYARERVQGRAIEGSAAPVTIAHHPDVQRMLLTMRALTEAARAVSYVAAAAHDKGTHHPDAEVRARNRAFYEYLVPIVKGFSTESAVEVASLGIQVHGGMGFIEETGAAQHYRDARILPIYEGTTAIQANDLVGRKTLRDGGATAHASIAAMRDTLKAVAAEAQRADTADHTALRVLRDNFDQAIQSYEGAVEFILAHAASNVRAVYSSSVPYLMLAGVVHGGWQMARAALACRRHLAAGSGDAFHRHKLGTALFYGAHILPRALALAAAVRAGDVADSCGSMADIA
>CP025477.1|AZY33446.1|980818_981748_+|electron-transfer-flavoprotein-subunit-alpha
MTTLVIAEHDNAQLKGATLNTIAAASRLGGEVHVLVAGSGAQAVAEQAAQAARVSKVLLADAPQLAEGLAENLAAQVLAVAGGYSHILFAATASGKNVAPRVAAKLDVAQISDIIGVESADTFQRPIYAGNAIATVQSGDAVKVITVRTTGFDAVAAQGGSAAVEALDAVADSGLSRFVGREVAKSDRPELAGARVVVSGGRGLGSAENFKILDPLADKLGAALGASRAAVDAGYAPNDWQVGQTGKIVAPQLYVAVGISGAIQHLAGMKDSKVIVAINKDPEAPIFGVADYGLVGDLFQVVPELTGAL
>CP025477.1|AZY33455.1|995445_996171_+|CoA-pyrophosphatase
MSDSAPSRPRRTPVRPLFDPMAQPWETANQGLARVDERLLTPPELRSSLRPADHWRLDPLCAAEPRAPGREGSLVAAAVLIPLVMRADGVRVMLTQRAAHLHDHAGQVSFPGGRIEVSDATPVAAALREAQEETGLPVQQVEVLGSMPQYFTATGFAITPVVSLVQPDFELAPDAFEVAEVFEVPLSFLMDPANHRLYRAALPDGYVRQYYAMPWQRYFIWGATAGMLRNLYQTVREALPG
>CP025477.1|AZY33456.1|996266_997217_-|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP025477.1|AZY33457.1|997321_998371_+|NADP(H)-dependent-aldo-keto-reductase
MKYRKLGHTDLDVSLIGLGTMTWGEQNTEAQAHEQLDYALAHGINLVDAAEMYPVPPKPETQGRTESCIGSWLARTGRRHEVVLASKAAGPVRDAKRPSHIRDGKTFLDRKNLTQALDASLKRLQTDYLDLYQLHWPDRTTNTFGKLAYPWVDDAHTVPIEETLEVLQDFVRAGKVRHVGLSNETPWGVARFLQAAEKHGLPKVATIQNPYNLLNRIFEIGLAEFSHREGVGLLAYSPLAMGILSGKYLDGARPEGSRLALFTRFTRYSNPQAEAAARDYVMLARDHGLAPAQMALAWVNQRPFVSSNLMGATTLAQLKENIESVEVTLSDEVLQGIEAIHARQPNPAP
>CP025477.1|AZY36049.1|998508_999525_-|IS110-family-transposase-IS1663
MADSSLLSAGGQVHVFIGIDVSKAKLDCTLLTAEADKCKTKVVVNTAAGVQALLAWCAKHGAQPAQLHAILEPTGLYHEQAATALPQVRVSLVNPAQARDFAKALALRSKNDALDSYVLARYGQTLSPALWHPAPLHARQLRALLTRREALSKDLLRELNRKEKSQFSPSAPLVDGSIDKAIAFLREQIKQIERAIDQHIDNHPDLKQDCELLNSIPAIGPQAGNAILAVMHNRHIDSAQSLAAYLGVVPVQRQSGSSLNSCARLSKAGPSQVRATLYMAALVGTRHNPHIRALYQRLLKAGKSKKAALGAAMRKLVHLCFGVLKNRIPYQPNYAMNG
>CP025477.1|AZY33458.1|1001033_1001606_-|chorismate--pyruvate-lyase
MTTPIPLARGWLPAAPSTLDPLRKYWLFRPGALTAGLRQLGHVRLRVLAEYPTGAPRDEADGMRIAAQSPVWVREVLMSIDGVDSVVARSLTPLRASHGVWQGMRRLLTRPLADMLYHDPGIHRSVFVCRRLAAGVPFHATAIARAPAGGPEPALWARRSAFWRAGQPLLVAECFLPAFWSLARAPVAPR
>CP025477.1|AZY33459.1|1001665_1002397_+|rRNA-pseudouridine-synthase
MEKVRISKLMSERGLCSRREADSYIERGWVRVDGVVVSELGARALPDQVITLERAAAARQTARVTILLHKPVGYVSGQAEKGYTPAVALIDARSRYAGDRAPQRFERGQLQGLAVAGRLDIDSQGLLVLTQDGRIAKKLIGEDSEVDKEYLVRVQGRLSEAGLALLNHGLSLDGKPLRPAQVRWQNADQLRFVLREGKKRQIRRMCELVGLRVVGLKRVRIGRVSLGDLPAGQWRYLRADERF
>CP025477.1|AZY36050.1|1002448_1003366_-|LysR-family-transcriptional-regulator
MELFVEVARTLSFGRAAENLAIPKSTLSRQVAELERSVGLRLLSRTTRRVELTEAGQLYFERCQRIVAEARIAHEELQNLVETPSGPLRVNMPADFGTDFLSEAFTEFSRRYPEVTFYLDLASPEHAERVFQTCDVSIEIGDLPDSTHIARLLGVLPAHLYASPDYLARHGEPQHPDDLPRHECIQFRAGTGRVTRWPLNSGERHVEITPGNRFSVNSVSMVRNLATLGAGIAILAPMGNVREDIESGRLKRILPDWLAGPFPVYAVTDTRMLPAKTRIFVEFLMERLSNKTLAGQNNPAFLNLR
>CP025477.1|AZY33460.1|1004173_1007353_+|multidrug-efflux-RND-transporter-permease-subunit
MAKFFIDRPVFAWVIAIVLMMAGALSILSLPVAQYPNIAPPAISINVTYPGASAQTVQDTVVQVIEQQMNGIDNLQYISSESNSDGSMSITLTFSQGTNPDTAQVQVQNKLAVAQPLLPLEVQQQGIRVTKATKNFLIVAGFVSTDGTMDKSDLADYVASYIQDPISRTPGVGNFQLFGAPYAMRIWISPEKLVNFGLTASDVTTAIREQNVQVSSGQLGGQPAVRGQQLNATVIGPSRLQTPEAFGRILLKVNRDGSQVRLKDVASIELGAQTYAIDSYYNGKPASGLAIKLASGANALDTAQAVRETINGLKPYFPPGMDVVYPYDTTPFVSLSIEGVVKTLFEAVLLVFLVMYLFLQNVRATLIPTLAVPVVLLGTFGVLAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLSPRQATRKSMGQITGALIGIAMVLAAVFVPMAFFGGSTGVIYRQFSITIVSSMVLSVVVAIVFTPALCATMLKPIPKGHHGSKKGFFGWFNRTFERSSQAYANNVARSMGRTKRLLLIYVVILLGMAWMFMRIPTAFLPDEDQGILFAQVQAPAGATSERTQATIDAAVKYLLEDEKESVASVFAVNGFSFGGRGQNAAILFIKLRDWNERKGAEHRAAAVAARANAKFRAELRDAQAAVFAPPAVMELGNATGFDFQLQDRAGVGHEKLLAARNQLLQEAGASPMLVAVRPNGIEDAPQYQLDIDREKARALGVSITEINNTLATAWGSSYVNDFIDRGRVKKVFVQGEASSRMLPQDLDKWYVRNNAGDMVPFSAFSSAQWTFGPQKLNRYNGVPSYNIQGQAAPGYSSGDAMAEMERLADKLPLGIGYDWTGLSFEERLSGAQAPALYAISLIVVFLCLAALYESWSIPTAVMLVVPLGVVGALLATMTRGLSNDVYFQVGLLTTIGLAAKNAILIVEFAKEHYEEGASLTEAAVHAARQRLRPILMTSLAFILGVVPLAISTGAGSGSQNAIGTGVIGGMLTGTFLAIFFVPLFFVLTLRLFKVKRASENREDDDPHGGAQPATHGGQPQ
>CP025477.1|AZY33461.1|1007349_1008732_+|multidrug-transporter
MKPVVMRTLLSLAVATALAGCSLAPTYERPQAPVDAAYPSGPAYGAPGQAAAGAPAAADVGWRDFFGDPLLQELLALSLANNRDLRVAALNVEAARLNPSGQAGISRSYQVGASLSTWELDLFGRIRSLSEQALQLYLAQDETRLATQLTLVAETANAYLTLRADQELLALTRQTLAAQQESYKLTRQSYDLGVATELDLSQAEISLRTAERNLSQYTRMAAQDRNALVLLVGQPLPAGIGAQLDQAVALPDGVVLADLPAGLPSDLLARRPDIRAAEHQLQAANASIGAARAAFFPRISLTGSAGTASASLGGLFDAGSGAWSFAPQISVPIFAGGALRASLDLAKIQKDIGIARYEQAIQSGFREVSDALAGRGTLQEQIRSQELLVQANQRAYDLSQQRYQQGIDNYLSVLDSQRSLYTAQQTLVETRLARLSNLIQLYKALGGGWSERTVAAAQAG
>CP025477.1|AZY33462.1|1008801_1009053_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MNIIIMIIVGFVVGLITRAIMPGDQNMGYIMTTILGIIGSVVAGFLGQQLGWYAPGEPAGWIGSVVGAIIVLFVVGLVAKKRA

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Crispr_ID: CP025477_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025477_4

1820855-1820982

Orphan

Consensus_repeat	Method
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCG	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of CP025477_4

>merge|CP025477|4|1820855-1820982|CRISPRCasFinder
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCGTGGGGGCACTACTTTGCCGCTGGGCCGCCCCAAGGCAAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCGTAGCGGGCGCAGCG

>CP025477|4|4|1820855-1820982|CRISPRCasFinder
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCG	TGGGGGCACTACTTTGCCGCTGGGCCGCCCCAAGGC
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCGTAGCGGGCGCAGCG

Protein	Signature genes	Signature genes Name	Protein_function
CP025477.1\|AZY34095.1\|1808750_1809200_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239527
CP025477.1\|AZY34104.1\|1818497_1819448_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025477.1\|AZY34101.1\|1814869_1816855_-\|poly-beta-1,6-N-acetyl-D-glucosamine-export-porin-PgaA	unknown	unknown	gnl\|CDD\|274868
CP025477.1\|AZY34114.1\|1829219_1831082_+\|chaperone-protein-HscA	unknown	unknown	gnl\|CDD\|235360
CP025477.1\|AZY34102.1\|1817063_1817300_+\|hypothetical-protein	unknown	unknown	unknown
CP025477.1\|AZY34105.1\|1821005_1821734_-\|transcriptional-repressor-LexA	unknown	unknown	gnl\|CDD\|234688
CP025477.1\|AZY34106.1\|1821784_1822987_-\|aspartate/tyrosine/aromatic-aminotransferase	unknown	unknown	gnl\|CDD\|181731
CP025477.1\|AZY34110.1\|1826590_1827802_+\|IscS-subfamily-cysteine-desulfurase	unknown	unknown	gnl\|CDD\|184450
CP025477.1\|AZY34099.1\|1811495_1812755_-\|poly-beta-1,6-N-acetyl-D-glucosamine-synthase	unknown	unknown	gnl\|CDD\|236882
CP025477.1\|AZY34096.1\|1809407_1809707_+\|transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|223713
CP025477.1\|AZY34103.1\|1817644_1818130_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
CP025477.1\|AZY34100.1\|1812758_1814864_-\|poly-beta-1,6-N-acetyl-D-glucosamine-N-deacetylase-PgaB	unknown	unknown	gnl\|CDD\|274867
CP025477.1\|AZY34112.1\|1828251_1828575_+\|iron-sulfur-cluster-assembly-protein-IscA	unknown	unknown	gnl\|CDD\|213674
CP025477.1\|AZY34113.1\|1828577_1829090_+\|co-chaperone-protein-HscB	unknown	unknown	gnl\|CDD\|235133
CP025477.1\|AZY34111.1\|1827839_1828250_+\|Fe-S-cluster-assembly-scaffold-IscU	unknown	unknown	gnl\|CDD\|183087
CP025477.1\|AZY34108.1\|1825353_1825845_+\|low-molecular-weight-phosphotyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|319971
CP025477.1\|AZY34098.1\|1810876_1811515_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372868
CP025477.1\|AZY34097.1\|1809759_1810872_+\|alkene-reductase	unknown	unknown	gnl\|CDD\|239243
CP025477.1\|AZY34107.1\|1823064_1825101_+\|UvrABC-system-protein-B	unknown	unknown	gnl\|CDD\|235395
CP025477.1\|AZY34109.1\|1826060_1826573_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	unknown	unknown	gnl\|CDD\|273927

Protein	Function_ID	Function_description	E-value
CP025477.1\|AZY34095.1\|1808750_1809200_-\|hypothetical-protein	gnl\|CDD\|239527	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).	0.000948481
CP025477.1\|AZY34104.1\|1818497_1819448_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.66858e-23
CP025477.1\|AZY34101.1\|1814869_1816855_-\|poly-beta-1,6-N-acetyl-D-glucosamine-export-porin-PgaA	gnl\|CDD\|274868	TIGR03939, PGA_TPR_OMP, poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA. Members of this protein family are the poly-beta-1,6 N-acetyl-D-glucosamine (PGA) export porin PgaA of Gram-negative bacteria. There is no counterpart in the poly-beta-1,6 N-acetyl-D-glucosamine biosynthesis systems of Gram-positive bacteria such as Staphylococcus epidermidis. The PGA polysaccharide adhesin is a critical determinant of biofilm formation. The conserved C-terminal domain of this outer membrane protein is preceded by a variable number of TPR repeats.	1.10027e-119
CP025477.1\|AZY34114.1\|1829219_1831082_+\|chaperone-protein-HscA	gnl\|CDD\|235360	PRK05183, hscA, chaperone protein HscA; Provisional.	0
CP025477.1\|AZY34098.1\|1810876_1811515_-\|hypothetical-protein	gnl\|CDD\|372868	pfam13994, PgaD, PgaD-like protein. This family includes the PgaD protein from E. coli. The homopolymer poly-beta-1,6-N-acetyl-D-glucosamine (beta-1,6-GlcNAc; PGA) serves as an adhesin for the maintenance of biofilm structural stability in eubacteria. The pgaABCD operon is required for its synthesis and export. It has been shown that PgaD is essential for this process.	0.00341018
CP025477.1\|AZY34105.1\|1821005_1821734_-\|transcriptional-repressor-LexA	gnl\|CDD\|234688	PRK00215, PRK00215, transcriptional repressor LexA.	1.30999e-106
CP025477.1\|AZY34106.1\|1821784_1822987_-\|aspartate/tyrosine/aromatic-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
CP025477.1\|AZY34110.1\|1826590_1827802_+\|IscS-subfamily-cysteine-desulfurase	gnl\|CDD\|184450	PRK14012, PRK14012, IscS subfamily cysteine desulfurase.	0
CP025477.1\|AZY34099.1\|1811495_1812755_-\|poly-beta-1,6-N-acetyl-D-glucosamine-synthase	gnl\|CDD\|236882	PRK11204, PRK11204, N-glycosyltransferase; Provisional.	0
CP025477.1\|AZY34096.1\|1809407_1809707_+\|transcriptional-regulator	gnl\|CDD\|223713	COG0640, ArsR, Predicted transcriptional regulators [Transcription].	1.67046e-14
CP025477.1\|AZY34103.1\|1817644_1818130_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	7.77331e-19
CP025477.1\|AZY34100.1\|1812758_1814864_-\|poly-beta-1,6-N-acetyl-D-glucosamine-N-deacetylase-PgaB	gnl\|CDD\|274867	TIGR03938, hypothetical_protein_Pcar_2791, poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB. Two well-characterized systems produce polysaccharide based on N-acetyl-D-glucosamine in straight chains with beta-1,6 linkages. These are encoded by the icaADBC operon in Staphylococcus species, where the system is designated polysaccharide intercellular adhesin (PIA), and the pgaABCD operon in Gram-negative bacteria such as E. coli. Both systems include a putative polysaccharide deacetylase. The PgaB protein, described here, contains an additional domain lacking from its Gram-positive counterpart IcaB (TIGR03933). Deacetylation by this protein appears necessary to allow export through the porin PgaA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0
CP025477.1\|AZY34112.1\|1828251_1828575_+\|iron-sulfur-cluster-assembly-protein-IscA	gnl\|CDD\|213674	TIGR02011, Protein_yfhF., iron-sulfur cluster assembly protein IscA. This model represents the IscA component of the ISC system for iron-sulfur cluster assembly. The ISC system consists of IscRASU, HscAB and an Isc-specific ferredoxin. IscA previously was believed to act as a scaffold and now is seen as an iron donor protein. This clade is limited to the proteobacteria. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	4.04388e-54
CP025477.1\|AZY34113.1\|1828577_1829090_+\|co-chaperone-protein-HscB	gnl\|CDD\|235133	PRK03578, hscB, Fe-S protein assembly co-chaperone HscB.	2.55481e-79
CP025477.1\|AZY34108.1\|1825353_1825845_+\|low-molecular-weight-phosphotyrosine-protein-phosphatase	gnl\|CDD\|319971	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase. Low molecular weight protein tyrosine phosphatases (LMW-PTP) are a family of small soluble single-domain enzymes that are characterized by a highly conserved active site motif (V/I)CXGNXCRS and share no sequence similarity with other types of protein tyrosine phosphatases (PTPs). LMW-PTPs play important roles in many biological processes and are widely distributed in prokaryotes and eukaryotes.	1.04407e-74
CP025477.1\|AZY34109.1\|1826060_1826573_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	gnl\|CDD\|273927	TIGR02010, Putative_HTH-type_transcriptional_regulator, iron-sulfur cluster assembly transcription factor IscR. This model describes IscR, an iron-sulfur binding transcription factor of the ISC iron-sulfur cluster assembly system. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Regulatory functions, DNA interactions].	1.00126e-77
CP025477.1\|AZY34097.1\|1809759_1810872_+\|alkene-reductase	gnl\|CDD\|239243	cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include 12-oxophytodienoate reductase, pentaerythritol tetranitrate reductase, morphinone reductase, and related enzymes.	0
CP025477.1\|AZY34107.1\|1823064_1825101_+\|UvrABC-system-protein-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
CP025477.1\|AZY34111.1\|1827839_1828250_+\|Fe-S-cluster-assembly-scaffold-IscU	gnl\|CDD\|183087	PRK11325, PRK11325, scaffold protein; Provisional.	5.84746e-99

>CP025477.1|AZY34104.1|1818497_1819448_+|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP025477.1|AZY34103.1|1817644_1818130_+|MarR-family-transcriptional-regulator
MPASQDKPDVPPGPYHFSEQVGHLLRRAYQRHVAIFQQTIPDSKLTAAQFVVLCALRDQGACSLVDVVKATAIDQATVRGVIERLKARKLLAVSHDPADRRKVLVTLTPDGRALVEEMVPFAEQITQSTFGGLNPAERVAIVYLLRKMSDADDLVGRQSES
>CP025477.1|AZY34102.1|1817063_1817300_+|hypothetical-protein
MRRAAKWWGPAATWTLAALLVLLVGHGVVPEAARVSDAPLLHAMAGHAYLLNWAAGLMALIGWGDSLVLYRRTRRRAV
>CP025477.1|AZY34101.1|1814869_1816855_-|poly-beta-1,6-N-acetyl-D-glucosamine-export-porin-PgaA
MNNDQTRRTRPASVRGLRRTRLLVAGLAFVGAAAAAAPSVRDQVQEASRSGAANLALDLATEHRALFTPLEYAQLQHAAIAQRLRWSRAETWNLTGPERFATLDAALADGWQLLDSLPLAPEYASLRTAVISDMIYGLGLRGRYADAIKLYEGLRATNTPVHPYVLVSAGNAYAYEERYDEAIVCYEEALAKAGPGDIDRVPTQESLFFAYMDRGRYEDAEQLLQRIEKTSPQYVENAPVAERPNEDYATAQRLRAQYLMYSGETEAGTLAIDALQHDAPFSSGLRNAAASARLGDARPREAKAAFTTALAERPDDIQAMTGLARASMALREYPEAEAIVTTLSERFPESSSVRNLQRDYEVYQSPLLTMDFGGDIGHGGDNSNNDNSTIANREWSLNTMLYTSPISHNYRLFFHQFTGYADLGDGHKSRVRNGAGLEYRRGSIEASTELHQSTGPSGRFGASANVAWLPSDGWRLAANFDSDSNDLPWKAYRAGIHGWSSGVSARYQPTERTYYDVAYQLQHYSDSNTRQTIGATWFQNLWTVPRHSVSTWTSVAYSNNSKTDTECFSPDHDLTAQVTAMYEWRPWRDGQYAFRQRVYATGGVYNQAEHGNSALWQLRLEQVWDLPRQTSITYGVGYGRHSYDGDPENRTLFYLTLNIPF
>CP025477.1|AZY34100.1|1812758_1814864_-|poly-beta-1,6-N-acetyl-D-glucosamine-N-deacetylase-PgaB
MTAMHRTLLKWFACCALGLLMLPARAYKVDMLPPPDPDDGLTFRVLCMHDVRDNLRASFADMPDQFAIETRTLTDLFEWIRVKGFNLISMQQIIDSRAGVRPLPPRPILLTFDDGYASTYTKVFPLLKKFNYPAVVAVVTSWTDAPAGTKIRLSPKIEVPHDFFMTWAQLREMAQSGLVELASHSHNLHRGVLANPQGNEQPAASSRQYLPASGRYENDAEYRARVRQDLKTSADLIREHTGVTIRSIVWPYGAHNRDTDQVAAEVGLNIGLTLQPGPNTPDVSLTQIRRSLVDYEVNVATVARAMREPVSYHGQVRPIERIVQVDLDYIYDPDPEQQNRNLGQLIDRMKDLAPSAVYLQAFAYPKGDGDITEVYFPNRHLPMRADLFNRVAWQLKTRAGVMVYAWLPVLTFSVPPGNPAYGKVVQSTTRKPGERGLGSPTRLSPFHPDAHRVISEIYEDLAKAAHFDGLLFHDDAVLDDTEDSSPEALATYQGWGLPPDIAAIRADPKLAQQWSKGKIRYLIDFTMHLRHIVSGYQNDRDMVVARNLYAQPVLDPVSEAWYGQSLPEFLKSYDFVALMAMPNMEGAARPEQWMRQLVAAVARQKGLDRTIFELQARDWRVGKPIDTEILRKQMVQLRSLGAINYGYYPDDFIANHPDAEVLRDVMSLKSTLEKRRLTKAQELSRQTTLYGSASQAEPTQR
>CP025477.1|AZY34099.1|1811495_1812755_-|poly-beta-1,6-N-acetyl-D-glucosamine-synthase
MNDSVKSVLSSFVFYYPFFMSYFWIVGGLLHFFLFEQGRKHRATLLPRVPRVAIVVPCYNEGENVAEVIAHLDRMHYPNYRIIAVNDGSRDNTGALLNELAEQYPRLLVVHQSRNEGKAIGLNTAAQLSDAEFLLCIDGDSLPHPDSITYMLTHFLHAGHVGAVTGNPRIRNRSTVLGRMQVGEFSSIVGLIKRTQQLYGKLMTVSGVMTMFRKQALHQVGYWSPDMQTEDIDISWKLQLAGWTLRYEPRALTWILMPETFRGLFKQRYRWARGGIETALKYAPRMLNPRQILMWPIFLEFSLSVLWAYAMLFLICMAVLGQFVALPPAWQFEIFPRWHGTLLFLTCLAQLFAGCIVDRAYDYRIFRYFADAVWYPIAFWIIGMITTVFALPRVLFRRAQSRARWVSPDRGIKHESVDH
>CP025477.1|AZY34098.1|1810876_1811515_-|hypothetical-protein
MKALIIDISASPLREYVHQHGVADGLLYGCWYRIVRPLLVILTWVAFSLYIHHSLVTVGGTAAQIAELLVYITVVATMAAALTAWMIVCRFHGWIRARDNEEVGVGLDPEYALPPRWPLPEGANRLLVDHDEAGAIVQVSAWYVPAAIEPVVAAAMASAVMPEAAPLSEPAPVAAALPDEADELAAWSGPPMQRQPDGRIEPTLHDGRALTL
>CP025477.1|AZY34097.1|1809759_1810872_+|alkene-reductase
MSTLFQPLNAGKLRLANRIVMAPLTRNRSPNAVPPPLTATYYAQRASAGLIITEATAISHQGQGYADVPGLYAPEQLAGWRRVTDAVHAAGGTIVVQLWHVGRISHTTLQPGQGAPVAPSAIRAQARTYLVDAQGKGQFADTSEPRALALDELPGIVEDYRRAARAAIDHGFDGVELHAANGYLLDQFLRSGSNHRDDAYGGSIENRARLLLRALDAVCAEVGADRVGIRLSPVTPANDAHDDQPQPLFEYVLRELARRGLAYVHVIEGATGGDRAYQQGPAPFDYAALKAAYRAAGGAGAWMVNNGYDISLAEQKLSSGQADLVAFGKPFIANPDLVARLRQGAALNEGDRDTFYGGGERGYTDYPALA
>CP025477.1|AZY34096.1|1809407_1809707_+|transcriptional-regulator
MAINTEDILKALAHPARRNILAWLKEPQRHFPQQEHPLELGVCAGQFERCGLSQSTVSTHLAILQRAGLIHSRRVGQWVFYQRNEACIAEFLQTMQAEL
>CP025477.1|AZY34095.1|1808750_1809200_-|hypothetical-protein
MTRPSDIKPREGDTPGTPYAAFVEGAALGPVSFDITPAIVQEYFEASQADPALYRVDVRQAAAPNVILPYMTVPVYQTYPPIQGIVMAELEMSWHRPIWADETTRVTATGTILRKFEKRGRRYVQWEGRFRGADGQPIATLLNTFHVPE
>CP025477.1|AZY34105.1|1821005_1821734_-|transcriptional-repressor-LexA
MRLAFFPWVLQNGAVYPYSPQKRVIAMATKLTERQQEILDLIRQTVARTGFPPTRAEIAQALGFRSPNAAEDHLKALARKGAIELTAGASRGIRLKVPDSATPSAQLTHPLLAQLVLPLVGRVAAGSPILASEHVEREVGVDPGLFAQTPDYLLKVRGMSMRDAGILEGDLLAVKRAAEARNGQIVVARLGDEVTVKRLQRQNGRIELLPENPDFAPIVVANTDEFALEGIAVGLIRTQPLH
>CP025477.1|AZY34106.1|1821784_1822987_-|aspartate/tyrosine/aromatic-aminotransferase
MSTLFASVELAPRDPILGLNEQYNADTRPGKVNLGVGVYYDDEGRIPLLQAVRKAEVARIEAAAARGYLPIEGIAGYNKGAQALLLGADSPLAAEGRVLTAQALGGTGALKIGADFLRQLLPQSKVLISDPSWENHRALFERAGFPVETYAYYDAATHGLNFEAMLAALQAAPEQTIVVLHACCHNPTGVDPTPQQWEQIAAVVKARNLVPFLDIAYQGFGEGLEQDAAVVRMFAELDLTMFISSSFSKSFSLYGERVGALTVVAGSKDEAARVLSQLKRVIRTNYSNPPTHGGTVVSTVLNTPELFALWENELAGMRDRIRLMRKELVEKIKTQGVAQDFSFVLAQRGMFSYSGLTAAQVDRLREEHGIYAVSSGRICVAALNSRNIDAVAAGIAAVLK
>CP025477.1|AZY34107.1|1823064_1825101_+|UvrABC-system-protein-B
MTAPGFVEFPDSPFHLYQPYPPAGDQPGAIDALTEGVSDGLMFQTLLGVTGSGKTYTMANMIARLGRPALVLAPNKTLAAQLYAEMREFFPRNAVEYFVSYYDYYQPEAYVPTRDLFIEKDSSINEHIEQMRLSATKSLLERRDTVIVGTVSCIYGIGNPGDYHAMVLILRTGDRISRREVLARLVAMQYTRNDADFTRGVFRVRCETIDIFPAESPELALRLTLFDDEIESLELFDPLTGRVRQKLPRFTVYPGSHYVTPRETVLRAIETIKEELRERLAQLIADGKLVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLIDYLPADALMFIDESHVTIGQLGGMYRGDRSRKETLVQYGFRLPSALDNRPLRLEEFEARMRQCVFVSATPAAYEQEHADNVVEQVVRPTGLVDPIVEVRPAHTQVDDLLGEIHKRAALQERVLVTTLTKRMAEDLTDFLSEHGVRVRYLHSDIDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGRAILYADRITDSMRRAIDETERRRAKQIQHNTDHGITARGVSKAVRELIDGVVAPAGHDALESAVPAEVLTDEKAMAREIRRLEKLMMDHARNLEFEQAAAARDALNALKSRLLLDGVGWSG
>CP025477.1|AZY34108.1|1825353_1825845_+|low-molecular-weight-phosphotyrosine-protein-phosphatase
MMTKVLFVCMGNICRSPSAEGVFRYLVNDAGMGDVVRVDSAGTHAFHIGEAPDARAQAAARKRGYDLTHCAARQVTADDFREFDLILAMDWDNLAALQQQCPKAYQHKLMLLMRFANEFEEATVPDPYYGGPEGFGKVLDYLEDACQGVLELVRKRATQYQAA
>CP025477.1|AZY34109.1|1826060_1826573_+|Fe-S-cluster-assembly-transcriptional-regulator-IscR
MRLTTKGRFAVTAMIDLAMRQHSGPVTLAAISQRQNISLSYLEQLFGKLRRHELVDSVRGPGGGYSLARLARNVTVADIIFAVDEPLDATSCGGKRDCTSGNDGKPGKCMTHELWTTLNRKMVDYLDSVSLQDLVDQQRVRQLQEAANQAQGCSAVRVNRSTPVAANATA
>CP025477.1|AZY34110.1|1826590_1827802_+|IscS-subfamily-cysteine-desulfurase
MSNRPIYLDYSATTPVDPSVVEKMIPWLYESFGNPASRSHAFGWEAEDAVEKAREEVAKLVNADPREIVWTSGATESDNLAIKGAANFYAERGKHIITVKTEHKAVLDTCRELERQGFEVTYLDVQDDGLLSLDAFKAALRPDTILVSVMMVNNEIGVIQDIAALGEICREKGIIFHVDAAQATGKVEIDLQKLKVDLMSFSAHKTYGPKGIGALYVRRKPRVRIEAQMHGGGHERGFRSGTLATHQIVGMGEAFRLAREEMGTENERVRMLRDRLLAGLTQIEEVYVNGSMEHRVPHNLNISFNYVEGESLIMAIKELAVSSGSACTSASLEPSYVLRALGRNDELAHSSIRFTLGRFTTEQEIDFTIELIKSRVGKLRDMSPLWEMAQEGIDLNSVQWAAH
>CP025477.1|AZY34111.1|1827839_1828250_+|Fe-S-cluster-assembly-scaffold-IscU
MAYSSKVLDHYENPRNVGSFDKGDDSVGTGMVGAPACGDVMKLQIKVNEAGVIEDARFKTYGCGSAIASSSLVTEWVKGKTLDEAMNIRNTQIAEELALPPVKIHCSILAEDAIKAAVQDYKTKHGAETPEAVAAN
>CP025477.1|AZY34112.1|1828251_1828575_+|iron-sulfur-cluster-assembly-protein-IscA
MAVTLTQSAANHVGRYLQKRGKGIGLRLGVRTTGCSGMAYKLEYVDEQAADDVVFDSFGVKVFIDPKSLAYLDGTELDYAREGLNEGFRFSNPNEKATCGCGESFTV
>CP025477.1|AZY34113.1|1828577_1829090_+|co-chaperone-protein-HscB
MAADDHFSLFGLPTRFALDPVQLEQAWRAVAARVHPDRYATASAAERRVAMQWAARANEAYRQLRDPMLRARYLCEQAGVDLQTESNTAMDPAFLMQQMEWREMLDDARRDPAAFAALRAELEQARLRMQQTLSELIDERGDYQQAGTKVREWMFVEKLAQELSAAQPMQ
>CP025477.1|AZY34114.1|1829219_1831082_+|chaperone-protein-HscA
MALLQISEPGDSPAPHQRKLAVGIDLGTTNSLVAAVRSSVPEVLADAQGQVLLPSAVRYLDGGAVRIGREALLEQARDPLNTIVSVKRFMGRSAADAAASGAPYEFVDAPGMVRLRTVQGDLSPVEVSAQILAVLRQRAEDVLGDDLVGAVITVPAYFDDAQRQATRDAARLAGLNVLRLLNEPTAAAIAYGLDQAAEGIYAVYDLGGGTFDISILRLTQGVFEVIATGGDTALGGDDFDSAIVAHACAGEDVAALPVADRRALLVAARAAREALTDQAQAPFEVTLRDGRAIQATLTRAQFEQLAEPLVGRTLDSARRALRDAGLAVGDVRGVVMVGGATRMPVVRQQVGALFGTEPLTNLDPDQVVALGAALQANLLAGNRALGEDWLLLDVIPLSLGLETMGGLVERIIPRNSTIPVARAQEFTTFKDGQTAMSVHVVQGERDLVSDCRSLARFELRGIPPMVAGAARIRVTFQVDADGLLSVTAREQSTGVEAAVAVKPSYGLSDDEIARMLADSVTQADSDARARMLREQQVEARQLVESVGAALAADGDLLDPAERATVDQRLQAAAQAQSLDDVEAVRAAVQALSDATEEFAARRMDRSIRSALAGRKLDELA

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Crispr_ID: CP025477_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025477_5

3432482-3432591

Orphan

Consensus_repeat	Method
TTGACTGCCAAGACGGTATCTGTCCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025477_5

>merge|CP025477|5|3432482-3432591|CRISPRCasFinder
TTGACTGCCAAGACGGTATCTGTCCCCGCAGGGAGGGTGCCTGTCCCCGCCGGGACAGGCACACTGCTGTACGCCATCGACGCTTGACGGCCAAGACGGTATCTGTCCCC

>CP025477|5|5|3432482-3432591|CRISPRCasFinder
TTGACTGCCAAGACGGTATCTGTCCCC	GCAGGGAGGGTGCCTGTCCCCGCCGGGACAGGCACACTGCTGTACGCCATCGACGC
TTGACGGCCAAGACGGTATCTGTCCCC

Protein	Signature genes	Signature genes Name	Protein_function
CP025477.1\|AZY35426.1\|3438030_3439455_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|236531
CP025477.1\|AZY35417.1\|3427337_3428108_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
CP025477.1\|AZY35413.1\|3419148_3422127_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375438
CP025477.1\|AZY35425.1\|3437329_3438031_+\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|181883
CP025477.1\|AZY35419.1\|3428939_3430349_+\|lytic-transglycosylase	unknown	unknown	gnl\|CDD\|182727
CP025477.1\|AZY35429.1\|3443855_3444734_+\|septum-site-determining-protein-MinC	unknown	unknown	gnl\|CDD\|178806
CP025477.1\|AZY35421.1\|3432592_3432985_-\|OsmC-family-peroxiredoxin	unknown	unknown	gnl\|CDD\|224679
CP025477.1\|AZY35414.1\|3423053_3423932_+\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|366126
CP025477.1\|AZY35430.1\|3444846_3445662_+\|septum-site-determining-protein-MinD	unknown	unknown	gnl\|CDD\|225447
CP025477.1\|AZY35428.1\|3441980_3443744_+\|glutamine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235424
CP025477.1\|AZY35416.1\|3426827_3427295_-\|ribonuclease-HI	unknown	unknown	gnl\|CDD\|178927
CP025477.1\|AZY35411.1\|3417844_3418795_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025477.1\|AZY35420.1\|3430443_3431229_+\|enoyl-[acyl-carrier-protein]-reductase-FabI	unknown	unknown	gnl\|CDD\|180789
CP025477.1\|AZY35422.1\|3433122_3433803_+\|DUF533-domain-containing-protein	unknown	unknown	gnl\|CDD\|377342
CP025477.1\|AZY35424.1\|3434874_3435825_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025477.1\|AZY35427.1\|3440524_3441865_-\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587
CP025477.1\|AZY35418.1\|3428128_3428929_+\|hydroxyacylglutathione-hydrolase	unknown	unknown	gnl\|CDD\|274569
CP025477.1\|AZY35412.1\|3418781_3419150_-\|hypothetical-protein	unknown	unknown	unknown
CP025477.1\|AZY35423.1\|3433807_3434806_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
CP025477.1\|AZY35415.1\|3425880_3426831_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234

Protein	Function_ID	Function_description	E-value
CP025477.1\|AZY35426.1\|3438030_3439455_+\|ATP-binding-protein	gnl\|CDD\|236531	PRK09467, envZ, osmolarity sensor protein; Provisional.	3.78414e-42
CP025477.1\|AZY35417.1\|3427337_3428108_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	9.0439e-10
CP025477.1\|AZY35413.1\|3419148_3422127_+\|hypothetical-protein	gnl\|CDD\|375438	pfam17936, Big_6, Bacterial Ig domain. This domain is found in a wide variety of extracellular bacterial proteins often in multiple tandem copies.	1.32844e-07
CP025477.1\|AZY35425.1\|3437329_3438031_+\|DNA-binding-response-regulator	gnl\|CDD\|181883	PRK09468, ompR, osmolarity response regulator; Provisional.	4.05363e-90
CP025477.1\|AZY35419.1\|3428939_3430349_+\|lytic-transglycosylase	gnl\|CDD\|182727	PRK10783, mltD, membrane-bound lytic murein transglycosylase D; Provisional.	5.28635e-76
CP025477.1\|AZY35429.1\|3443855_3444734_+\|septum-site-determining-protein-MinC	gnl\|CDD\|178806	PRK00030, minC, septum site-determining protein MinC.	3.47756e-166
CP025477.1\|AZY35421.1\|3432592_3432985_-\|OsmC-family-peroxiredoxin	gnl\|CDD\|224679	COG1765, COG1765, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones].	4.86152e-16
CP025477.1\|AZY35414.1\|3423053_3423932_+\|fatty-acid-desaturase	gnl\|CDD\|366126	pfam00487, FA_desaturase, Fatty acid desaturase.	2.20669e-12
CP025477.1\|AZY35428.1\|3441980_3443744_+\|glutamine--tRNA-ligase	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
CP025477.1\|AZY35416.1\|3426827_3427295_-\|ribonuclease-HI	gnl\|CDD\|178927	PRK00203, rnhA, ribonuclease H; Reviewed.	4.07937e-102
CP025477.1\|AZY35411.1\|3417844_3418795_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	5.27808e-22
CP025477.1\|AZY35420.1\|3430443_3431229_+\|enoyl-[acyl-carrier-protein]-reductase-FabI	gnl\|CDD\|180789	PRK06997, PRK06997, enoyl-[acyl-carrier-protein] reductase FabI.	1.22848e-177
CP025477.1\|AZY35422.1\|3433122_3433803_+\|DUF533-domain-containing-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	5.6465e-62
CP025477.1\|AZY35424.1\|3434874_3435825_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	7.3142e-23
CP025477.1\|AZY35427.1\|3440524_3441865_-\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	2.21087e-123
CP025477.1\|AZY35418.1\|3428128_3428929_+\|hydroxyacylglutathione-hydrolase	gnl\|CDD\|274569	TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753). [Cellular processes, Detoxification].	2.85848e-146
CP025477.1\|AZY35430.1\|3444846_3445662_+\|septum-site-determining-protein-MinD	gnl\|CDD\|225447	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning].	7.6448e-163
CP025477.1\|AZY35423.1\|3433807_3434806_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	7.76869e-129
CP025477.1\|AZY35415.1\|3425880_3426831_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.05216e-23

>CP025477.1|AZY35420.1|3430443_3431229_+|enoyl-[acyl-carrier-protein]-reductase-FabI
MGFLAGKRILMTGVLSNRSIAYGIARACRDQGADLAFTYVGDRFKERITEFAASFGSDIVLPCDVAEDSQIDAAFAELGKRWDGLDGLVHAIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPAMAKAALPLMEGRKGSVLTLSYLGSERVVANYNTMGLAKASLEASVRYLATALGPRGIRANAISAGPIKTLAASGIKDFSSILKFVEANAPLRRNVTIEDVGNVAAFMLSDLAAGITGEITHVDAGFSTVVPGMEN
>CP025477.1|AZY35419.1|3428939_3430349_+|lytic-transglycosylase
MRFLRLLLPLFLAVLAGCAGTAKQNQAAGPSSNRYIAQDTSRTVDLTSPPSDAWDRIRRGFAIPNLNTDLAQEWTDYYASHPESVQRMAERAGKYLYFIVDEINRRGLPTELALLPFVESAYNPTALSRSQASGLWQFIPTTGQHFNLKQDWWRDERRDPIASTYAALDYLEKLFEMQGDWYLALASYNWGEGSVQRAMAKNEAAGLSTDYLSLNMPDETRNYVPKLQAIKNIIANPRKFAVVLPPVENTPYFVAVQKNRDIDIELAARLAEMPLDEFKALNPAFNRPLIRGEHAPTLLLPADRADRFNANLQNYKGDLSSWKVYHTRRGESYAAIAKRFGISEAKLRASNDIGSKRKVAADQALLIPGVPSGDGAANIQLASLSPPVGALDNVGEPRAAAAPRGKAPARVASARPNVRTHKVSSGDTLFGLARKYGTSVGALRALNNLKGNNLKLGSQLRIPGTGTRG
>CP025477.1|AZY35418.1|3428128_3428929_+|hydroxyacylglutathione-hydrolase
MQTAPPLSAVVPLPAFSDNYIWALAHEGQAAVVDPGDAAPVLRWLRATGATLRAILLTHHHPDHVGGVLELVQATGATVYGPAGETLPHCDVRLAEGDRVTLPELALALEVLDVPGHTAGHIAYTGRAAGVERVLFCGDTLFAGGCGRLFEGTPAQMLDSLEKLSALPADTQVCCAHEYTLANLRWALAVEPANRTLQQWYQRAQELRNEGTPTLPSTIGQERETNPFLRTPHAAVAHAAAVWSGRSLATPVEVFAALRQWKNNFK
>CP025477.1|AZY35417.1|3427337_3428108_-|class-I-SAM-dependent-methyltransferase
MAEETPPIVELAEWFQTPPGQYVLAWEQAQFDEAVADIFGYYAWQVGLAEPNLLRANRMPFKAWVGAGVPPPELAQGWQACVAAAPEALPFESQSVDLLVLPHAFECAEAPHLVLREVERVLVPEGRVVISGFNPWSLWGARNLMPGMEAWLPLPLSAQVALPRLKDWFKLLSFEVERGRFGCYAPACRTDKWLRRWRFMERYGQRWWGLGGAVYVVTATKKVAAMRLIGPAWKTRRKRAQAASVVVNRQADDPGR
>CP025477.1|AZY35416.1|3426827_3427295_-|ribonuclease-HI
MQNLEGSGDGQQVEMWTDGACKGNPGPGGWGVLMRAGQHEKTMHGGERQTTNNRMELMAVIEGLRALKRPCRVTIHTDSQYVMKGMTEWLANWKRRGWRTADKKPVKNVELWQALDEQVGRHQVQWRWVRGHAGDPGNERADALANQGMEAARGR
>CP025477.1|AZY35415.1|3425880_3426831_+|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>CP025477.1|AZY35414.1|3423053_3423932_+|fatty-acid-desaturase
MVRPAEWLRHRRDWQSVLYLAALPALAAWQWVHGWHWALYAPMLFLTLGVGVIHHNHAHRRMWRPRWLNRLTDFWLTLLQGHPTFVFHAAHNANHHRYKHGPRDVARTYRFGGDTNHLAGYLLHPLQAVVVLYPLFLASLRRLRSRRPGVWRYCLRQYAAWLGLWGGLLALDPGKAFWLVIVPQLHGLHWLLATNYLQHAHADGGPGRHAALSYARNFEGWVNPLLFNIGLHTAHHENPRAHWSELRALHWQHYRDRVPSRLNERGLAPYMARVFVLGLFSRRCRTHTLMRP
>CP025477.1|AZY35413.1|3419148_3422127_+|hypothetical-protein
MQLWLPDGTATSVRANAAGGFEASSAGDMTSGLIRARATDRYGDTSQEVTYAYTDTVDKTAPVLSIAGVATDEATGRVTVTGRSEPDAQVTIRFPGGGRKTVRADANGAYRVRSDGDLPAGVIVVQAADAAGNSTQAQQAYQDTVDRTAPEPVQIALDTDAATGRLTVSGQAEPGGSVTVTWPDGTTQTVRVDADGGFRVTSAGDAAQGDVVVVVADQAGNRAAPVRAHYADPVDRTAPMTPTVRHATDAQTGRVTVMGRTEAGALVTVQFPDGSSKTVRAQNDGGYAATSDTDMVSGPIVVSAGDADGNRTPAQQVMYTDTLDKTAPASPSLTVREDAASGRATVTGQAEPGAAVRVVFPNGEAQTVTAGSDGAYSVTSTADMVAGEITVVAADASGNQSAPARTVFADAVDKTAPAAPTLALSEAADSGRLTVSGRTEPGASVRVTFPDGETVTVTAKADGTYTATSRADMIGGNVTVVATDTAGNAAAPVRAAYADTVDRTPPVLDTPVLNVASDSGRVTVTGVTEPGARVQVAIPGESLQTVTADSAGRYRAVSPGDVLQSGTVRVIATDAHGNASAPRDVPYQDAVDRTAPPLTIEAAVEQARTGVVNVSGKTEPNLMVSATFPDGQTAQARADGQGRYQLASPADVARSGRIAVSASDAAGNRAAARAEFTDQVDKTAPAVTIRAVTEQAGTGVATVSGATEPGATVSVTFPDGQVARATADRSGAYTVHSARDVTARGNISVIATDAAGNASPSVSRQFSNTVADTVPPSLTIAMVTTDPGNGRITVSGVTEAGARVHVVFPGGASDTVTADSKGGYRATSAGDVGSGAVTAQATDASANRSPLKTYAYTDAWQPRQLSAKDFSQSRYFVPLTTRGGTDNEPLLRITTNQQIPTAELRVALKPYKTEDRAGRLVREAITLKWGNAPGVGGDARALHFYVPDSAKAKLRKELTEVERSNDYKFWIEFTDTRFGGVARLYIKVISTL
>CP025477.1|AZY35412.1|3418781_3419150_-|hypothetical-protein
MHVGQGLGDAVHGNAPGGRVGANLGNAQRQDDFLAPRIEHDAVLAPDEILQACAPVEWRGRVLRAAAQLPRQGLAQIQPHAQLDASCEDSIGCMHGSSEPDLRNWKSPPPQFTQGARPDEHP
>CP025477.1|AZY35411.1|3417844_3418795_-|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIPPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>CP025477.1|AZY35421.1|3432592_3432985_-|OsmC-family-peroxiredoxin
MTIQVRANTPGGLQYTATAEGHELPLAMPQPQGEGPDPHDYFDTALGGCKALTLMVYAQRKGLPLQAVDVDVVRDASEERKGIYRLTAKLKLHGDLDDAQIDELLKVADKCPLHKLMTATDIQVSTIVVE
>CP025477.1|AZY35422.1|3433122_3433803_+|DUF533-domain-containing-protein
MSARQLLDQLLQSGQSLMQGAGAQAQQATQGGKGTFLAGLGGGALGAGALGLLLGSKKARKIGGKVAMYGGMAALGALAYRAYDQYQRNQAGGAAAPAPQTLDRLPPAPAEQHSNAVLVAMIGAAKADGHIGPDERQLLETELAKLSGDAGDRAWLEAELARPLDPAVIAQQARTPEMGAEMYLASLLVADEQSFMERAYLDELARQLKLPAELKQQLEAQVPAAA
>CP025477.1|AZY35423.1|3433807_3434806_-|tripartite-tricarboxylate-transporter-substrate-binding-protein
MRPVAPMTTMKSQVSILLAGCLLGAGAAAAQAPATYPDHAITIVVTFPPGGGTDLLARKLGAAMQQRLGQPVVVENRPGASGNIGARAVAEARPDGYTLLMVNSSFAVNPGVFRNLDFSPTRDFTAVINVAYVPSVIVTAEPAGDAGLPERLRQADTQSRTLAFASCGNGTPQHLAGEMLRQASGAWLQHVPYRGCGPALTDVLSRQVPLGIVTASSAAPFIHAGKLRALAVTSAQRSPLLPDVPTVAEQGAPGYELDQWHGLLAPAGTPPAVIQRLYEALSAIVAEPAMRRELESLGFNPVSEGPERFEALVQADIARFAALTARMGLRAD
>CP025477.1|AZY35424.1|3434874_3435825_-|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWQRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP025477.1|AZY35425.1|3437329_3438031_+|DNA-binding-response-regulator
MDNPHTKLLVVDDDPALRQLLADYLNRHGYDTLLAPDASDLAARITRYAPDLLVLDRMLPGGDGADACRRLRDQGEDIPVILLTARDEAVDRIIGLEAGADDYLGKPFDPRELLARIEAVLRRKRGPSALTKDAPVSFGPFVFDPATRQLLRDDTPVKLTGGEINLLEALVRNAGKPLSRERLLALARDDDGGERNDRAIDIAILRLRRAIEEDPKQPRWIQTVWGIGYRFSP
>CP025477.1|AZY35426.1|3438030_3439455_+|ATP-binding-protein
MKLLRLPAPRSLRMRLILLVLGSVLLAQAATLATVSYFRHKFMEDVAIDYIATTIRTLRASLSQVPTDERAEFVRQASGNQWRLWSRSLPADARLQRWHRGPQEDEAERERMRREYERRHPPPDDIRRDLRGLVSELNERLSDGTRVALSRGPRPEIFISLAPSPSPDDAPPLREWLVIPLERLDPPVATPLIAFWVGGIGLVLLLAAWFSWHITRPLTRLADAADQLAAGQPQRVEPSGPHETRVLGERFNAMLDALAESDSVRRTLLSGLPHDLKGPLSRMWLRIEMADDPTLKEGLRKDLQDMQHMVDQFIGFVRGTDPAAYRYAPLALGEWLAERVGAWQGAGTDIRLQAPDNGALGIQADAVALGRLLDNLIGNALHHGAPPVEVSLRRDADMAVLEVSDHGPGIAPERRTEALRPFARLDDARTRTGNVGLGLALAEAIARAHGGGLELRQAPSGGLLVRITLPLAKA
>CP025477.1|AZY35427.1|3440524_3441865_-|cytochrome-ubiquinol-oxidase-subunit-I
MNIPPLLLARAQFTASLGFLALFLAISLALAWLLLFFKLRARWSGQSGWTAAYRFWVRIFALAFVLALACAVPVLIQLGSLWSGLMDKIGNLAGPLLGYGVLSIFIVKSCFLGVMLFGQRRVSDAAHTLAVLMVAIGQLVAVGWVLALFSWLQTPDGAVLIDGRYQVYDWRAVVLNPSFGWRLGLTVLGAFLTAGFLMLGVTAMQALRRPLDDGERHAFRAGLTVALLASLLLGPVAAGMGEVTARLQPAKAAAAAGFWHSGAEPELVVFGWPSARAQANLAAVSLAGAGGRWLHRDASLGYLGLDKFSGMQPPVAFTFWSLRLALGLGLLMLAASCATLALTCRRGFDPVALPRWWLRVLSLLMFAGALGVVATWCYDLAGMQPYAVNRAVTQSEVLGPVTTPALLYSLAGHIALYAVLLAAFVGMLFHAARYGVVPVRKTGGSS
>CP025477.1|AZY35428.1|3441980_3443744_+|glutamine--tRNA-ligase
MTHAPTPPAASNFLRPIIEDDLQANRFQGKLWAGKPGPAALQAQGQPDPARIRTRFPPEPNGYLHIGHAKSICVNFGLARDYGGVCHLRFDDTNPEKEEQEYVDAIIEAVHWLGFDWQADGNDNLYFASDYFEFMYEFAEALVQAGHAYVDEQSAEEIRASRGTLTEPGTDSPWRDRPADESLLRLREMRDGKHPDGSLVLRARIDMASPNINLRDPVMYRVRHATHHRTGNAWCIYPMYSWAHPVEDALEGITHSICTLEFEDQRPFYDWILARLAELGKLARPLPHQYEFARLNLTYVVTSKRKLLQLVREGYVDGWDDPRMPTLFGLRRRGYTPSSIRLFCDRTAVSKSDSRIDYSLLEQAVRDDLDPVAPRSVAVLDPLKLVITNYPEGRSETCSAPRNPHDPQAGVREFPFTRELWIEQDDFREEPPKKYFRLFPGNTVRLKYGYVVRCTGFTKDESGKVVEVQAEYLPDTKSGTPGADSVKVKGNITWVSAAHAVPAQVHLYDRLFADAHPDGGDKDFLACLNPNSKQTVQAWLEPGIEAVPGATWQFERLGYFTVDSKDSRPEAPVLNRIVTLRDSWQAA
>CP025477.1|AZY35429.1|3443855_3444734_+|septum-site-determining-protein-MinC
MNTESLALDFKSATLYAIRVVLHDADTTRLRAALDKRMADAGSFFENEPVVIDATRVDAPVDWPALLQALADHNLPPIGVVAEGANLQGARDAGLVPVELSTSVARAPQVIDTAPPNDVATPVPSVPEATAEATAKAGPQDDEADGEQADEAPAHNPESVPTRAARETTEANRPTATPPQSSSALVITKPLRSGQRVYARHTDLIVIGMVSQGAEVIADGNVHVYGPLRGKAMAGARGDTSARIFTTQLDAELLAVAGVYRVVEDKLDRALHNQPALVRLDGDTLRIEALKG
>CP025477.1|AZY35430.1|3444846_3445662_+|septum-site-determining-protein-MinD
MTRIVVVTSGKGGVGKTTTSASFSAGLAMRGHKTAVIDFDVGLRNLDLIMGCERRVVYDFVNVIQGEASLKQALIKDKQLENLFILPASQTRDKDALTQEGVEKVIDELKEMGFDYIVCDSPAGIEAGALMAAYFADDALVVTNPEVSSVRDSDRILGILAAKSRRAVQGDEPVKEYLLLTRYNPKRVNDGEMLSLSDIEDILRIKLIGVIPESEAVLQASNQGLPAIHLKDTDVSEAYKDVVARFLGEERSLRFTDYEKPGLLKRLFGGK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 122073

110

Planktothrix_phage(16.67%)

protease,transposase,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY32603.1\|0_1920_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
AZY32604.1\|1916_2609_+	ribosomal RNA small subunit methyltransferase G	NA	NA	NA	NA
AZY32605.1\|2605_3403_+	ParA family protein	Q8JL10	Natrialba_phage	5.6e-20	34.9
AZY32606.1\|3409_4171_+	N-acetyltransferase	NA	NA	NA	NA
AZY32607.1\|4214_5132_+	chromosome partitioning protein ParB	I3NLC2	Bifidobacterium_phage	1.9e-16	38.1
AZY32608.1\|6721_7912_+	elongation factor Tu	A0A1V0SLW6	Klosneuvirus	3.1e-14	29.2
AZY32609.1\|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA
AZY32610.1\|8540_9074_+	transcription termination/antitermination protein NusG	G3MAW2	Bacillus_virus	1.4e-11	30.5
AZY32611.1\|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA
AZY32612.1\|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA
AZY32613.1\|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA
AZY32614.1\|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA
AZY32615.1\|11661_15774_+	DNA-directed RNA polymerase subunit beta	A0A0N9R0J7	Chrysochromulina_ericina_virus	2.4e-21	28.8
AZY32616.1\|15773_20018_+	DNA-directed RNA polymerase subunit beta'	A0A2I7QNZ7	Vibrio_phage	3.5e-68	24.7
AZY36001.1\|20126_20531_-	lipoprotein	NA	NA	NA	NA
AZY32617.1\|20771_21947_+	hypothetical protein	NA	NA	NA	NA
AZY32618.1\|24352_25459_-	peptidoglycan-binding protein	NA	NA	NA	NA
AZY32619.1\|26470_27286_+	DNA-binding response regulator	NA	NA	NA	NA
AZY32620.1\|27282_28233_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY32621.1\|28314_28650_-	CoA transferase	NA	NA	NA	NA
AZY32622.1\|28674_29109_-	hypothetical protein	NA	NA	NA	NA
AZY32623.1\|29141_30368_-	thiolase family protein	NA	NA	NA	NA
AZY32624.1\|30364_30862_-	dehydratase	NA	NA	NA	NA
AZY36002.1\|31069_31978_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY32625.1\|32163_33006_+	enoyl-CoA hydratase	NA	NA	NA	NA
AZY32626.1\|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA
AZY32627.1\|34625_35576_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY32628.1\|35572_36763_-	MFS transporter	NA	NA	NA	NA
AZY32629.1\|36949_37924_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
AZY32630.1\|37925_40064_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
AZY32631.1\|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
AZY32632.1\|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AZY32633.1\|41318_42212_+	M48 family peptidase	NA	NA	NA	NA
AZY32634.1\|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA
AZY32635.1\|42687_43218_+	peptide deformylase	E3SLL2	Synechococcus_phage	3.7e-12	35.4
AZY32636.1\|43346_43646_-	DUF1974 domain-containing protein	NA	NA	NA	NA
AZY32637.1\|43663_44614_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY32638.1\|45113_45749_+	hypothetical protein	NA	NA	NA	NA
AZY32639.1\|45720_45957_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AZY32640.1\|46084_46978_+	hypothetical protein	NA	NA	NA	NA
AZY32641.1\|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA
AZY32642.1\|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA
AZY32643.1\|50141_51092_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY32644.1\|51134_52391_+	MFS transporter	NA	NA	NA	NA
AZY32645.1\|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA
AZY32646.1\|54362_54953_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.2e-20	33.6
AZY32647.1\|54977_55667_-	amino acid ABC transporter permease	NA	NA	NA	NA
AZY32648.1\|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA
AZY32649.1\|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY32650.1\|57497_58448_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY32651.1\|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
AZY32652.1\|60474_60894_-	transcriptional regulator	NA	NA	NA	NA
AZY32653.1\|61077_62019_-	hypothetical protein	NA	NA	NA	NA
AZY32654.1\|62442_63279_-	hypothetical protein	NA	NA	NA	NA
AZY32655.1\|63473_64055_-\|protease	protease	NA	NA	NA	NA
AZY32656.1\|64067_64385_-	ferredoxin	NA	NA	NA	NA
AZY32657.1\|64488_65547_-	oxidoreductase	NA	NA	NA	NA
AZY32658.1\|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA
AZY32659.1\|67482_68664_-	hypothetical protein	NA	NA	NA	NA
AZY32660.1\|69085_70036_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY32661.1\|70129_70444_+\|transposase	transposase	NA	NA	NA	NA
AZY32662.1\|71636_73544_+	molecular chaperone HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	1.1e-117	37.2
AZY32663.1\|73705_74326_-	glutathione S-transferase	NA	NA	NA	NA
AZY32664.1\|74357_74939_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	A0A1W6DX33	Sphingobium_phage	1.7e-05	54.3
AZY32665.1\|75027_75279_-	hypothetical protein	NA	NA	NA	NA
AZY36003.1\|75280_76030_-	hypothetical protein	NA	NA	NA	NA
AZY32666.1\|76228_77638_+	signal recognition particle protein	NA	NA	NA	NA
AZY32667.1\|77634_78585_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY36004.1\|78659_79604_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY32668.1\|79600_81475_-	polysaccharide biosynthesis protein	A0A2P1ELS8	Moumouvirus	2.0e-23	26.9
AZY32669.1\|82822_83527_-	DUF2837 domain-containing protein	NA	NA	NA	NA
AZY32670.1\|83523_84630_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
AZY32671.1\|84891_85485_-	sugar transferase	NA	NA	NA	NA
AZY32672.1\|85481_86714_-	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	NA	NA	NA	NA
AZY32673.1\|86731_87991_-	glycosyltransferase WbuB	NA	NA	NA	NA
AZY32674.1\|88014_89103_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A0N9R0B2	Chrysochromulina_ericina_virus	4.8e-46	36.3
AZY32675.1\|89110_90211_-	aminotransferase DegT	A0A2K9L0G1	Tupanvirus	3.3e-31	29.7
AZY32676.1\|90214_90790_-	N-acetyltransferase	NA	NA	NA	NA
AZY32677.1\|90793_91846_-	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
AZY32678.1\|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA
AZY32679.1\|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA
AZY32680.1\|94288_94444_-	hypothetical protein	NA	NA	NA	NA
AZY32681.1\|94468_95272_-	type III pantothenate kinase	NA	NA	NA	NA
AZY32682.1\|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
AZY32683.1\|96203_97340_+	ABC transporter permease	NA	NA	NA	NA
AZY32684.1\|97339_98179_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.1e-21	32.4
AZY32685.1\|99111_99714_+	hypothetical protein	NA	NA	NA	NA
AZY32686.1\|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA
AZY32687.1\|100529_101786_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	6.2e-66	40.5
AZY32688.1\|101788_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA
AZY32689.1\|102808_103084_+	DUF493 domain-containing protein	NA	NA	NA	NA
AZY32690.1\|103091_103754_+	octanoyltransferase	NA	NA	NA	NA
AZY32691.1\|103815_104817_+	lipoyl synthase	NA	NA	NA	NA
AZY32692.1\|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	3.7e-47	53.4
AZY32693.1\|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
AZY32694.1\|106330_107392_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.6e-78	44.8
AZY32695.1\|107427_108378_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY32696.1\|109277_110471_+	cystathionine beta-lyase	NA	NA	NA	NA
AZY32697.1\|110552_111182_-	thiol:disulfide interchange protein DsbA	NA	NA	NA	NA
AZY32698.1\|111243_111927_-	SPOR domain-containing protein	NA	NA	NA	NA
AZY32699.1\|111936_113619_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
AZY36005.1\|113906_114254_+	DUF1840 domain-containing protein	NA	NA	NA	NA
AZY32700.1\|114344_114662_+	hypothetical protein	NA	NA	NA	NA
AZY36006.1\|114944_115961_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY32701.1\|116036_116837_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
AZY32702.1\|116833_117709_-	sugar ABC transporter permease	NA	NA	NA	NA
AZY32703.1\|117719_119012_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY32704.1\|119054_120095_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.0e-22	33.7
AZY32705.1\|120200_121022_-	phosphodiesterase	NA	NA	NA	NA
AZY32706.1\|121122_122073_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

164892 : 225403

Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY32737.1\|164892_165843_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY32738.1\|167286_168189_-	hypothetical protein	NA	NA	NA	NA
AZY32739.1\|168166_168796_-	LemA family protein	NA	NA	NA	NA
AZY32740.1\|169126_170509_+	RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.3e-42	29.5
AZY32741.1\|170542_171172_+	threonine transporter RhtB	NA	NA	NA	NA
AZY32742.1\|171220_172828_+	peptide chain release factor 3	A0A2K9L6L3	Tupanvirus	9.3e-14	37.8
AZY32743.1\|172852_173536_+	hypothetical protein	NA	NA	NA	NA
AZY36012.1\|173617_174094_-	bacterioferritin	NA	NA	NA	NA
AZY32744.1\|174300_175251_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY32745.1\|176366_176894_+	lipoprotein	NA	NA	NA	NA
AZY32746.1\|176985_177801_+	lipoprotein	NA	NA	NA	NA
AZY32747.1\|177861_178596_+	sulfurtransferase	NA	NA	NA	NA
AZY32748.1\|178633_180712_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.5e-27	23.6
AZY32749.1\|180961_181234_-	hypothetical protein	NA	NA	NA	NA
AZY32750.1\|181332_182421_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
AZY32751.1\|182424_184329_+	outer membrane protein assembly factor	NA	NA	NA	NA
AZY32752.1\|184325_188000_+	DUF490 domain-containing protein	NA	NA	NA	NA
AZY32753.1\|188060_188624_+	dCTP deaminase	S5VM63	Pseudomonas_phage	2.6e-72	75.3
AZY32754.1\|188631_189054_-	glyoxalase	NA	NA	NA	NA
AZY32755.1\|189081_189501_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA
AZY36013.1\|189529_189976_-	N-acetyltransferase	Q9AZG4	Lactococcus_phage	1.2e-08	29.4
AZY32756.1\|190102_190600_+	hypothetical protein	NA	NA	NA	NA
AZY32757.1\|190754_193025_+	lysine decarboxylase	NA	NA	NA	NA
AZY32758.1\|193073_194306_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
AZY32759.1\|194404_195355_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY32760.1\|195400_196093_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	2.4e-83	73.8
AZY32761.1\|196089_196983_+	ZIP family metal transporter	NA	NA	NA	NA
AZY32762.1\|197377_198478_+	aminomethyltransferase	NA	NA	NA	NA
AZY32763.1\|198559_198934_+	glycine cleavage system protein H	NA	NA	NA	NA
AZY32764.1\|198993_201858_+	glycine dehydrogenase	E3SN07	Prochlorococcus_phage	1.2e-261	51.4
AZY32765.1\|202002_202743_-	FadR family transcriptional regulator	NA	NA	NA	NA
AZY32766.1\|202812_204024_+	CoA transferase	NA	NA	NA	NA
AZY32767.1\|204052_205021_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY32768.1\|205634_206585_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY32769.1\|206741_207065_+	PsiF repeat family protein	NA	NA	NA	NA
AZY32770.1\|207169_208219_-	cyclase	NA	NA	NA	NA
AZY32771.1\|208215_209040_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA
AZY32772.1\|209040_209337_-	YciI family protein	NA	NA	NA	NA
AZY32773.1\|209362_209638_-	muconolactone delta-isomerase	NA	NA	NA	NA
AZY32774.1\|209694_210339_-	CoA transferase subunit B	NA	NA	NA	NA
AZY32775.1\|210338_211025_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA
AZY36014.1\|211154_212006_+	IclR family transcriptional regulator	NA	NA	NA	NA
AZY32776.1\|212056_212782_-	short-chain dehydrogenase	NA	NA	NA	NA
AZY32777.1\|212813_214163_-	short-chain fatty acid transporter	NA	NA	NA	NA
AZY32778.1\|214274_215207_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA
AZY32779.1\|215664_218460_-\|protease	serine protease autotransporter SphB1	NA	NA	NA	NA
AZY32780.1\|219053_221996_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
AZY32781.1\|222067_222787_+	7-cyano-7-deazaguanine synthase QueC	A0A0A0RPC6	Escherichia_phage	8.0e-50	43.9
AZY32782.1\|222825_223374_-	N-acetyltransferase	A0A2H4J136	uncultured_Caudovirales_phage	1.2e-21	41.7
AZY32783.1\|223528_224428_+	virginiamycin B lyase	NA	NA	NA	NA
AZY32784.1\|224452_225403_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

233335 : 286923

Bacillus_phage(25.0%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY32792.1\|233335_234286_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY32793.1\|234372_235323_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY32794.1\|235319_236270_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY32795.1\|236368_237166_-	beta-D-hydroxybutyrate dehydrogenase	NA	NA	NA	NA
AZY32796.1\|238115_238526_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA
AZY32797.1\|239547_240291_-	GntR family transcriptional regulator	NA	NA	NA	NA
AZY32798.1\|240334_241378_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY32799.1\|241548_243651_+	hypothetical protein	NA	NA	NA	NA
AZY32800.1\|245061_246018_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY32801.1\|246036_246528_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
AZY32802.1\|246524_247880_-	polynucleotide adenylyltransferase PcnB	A0A1B1IVF3	uncultured_Mediterranean_phage	3.4e-25	36.8
AZY32803.1\|247880_248579_-	HAD-IB family hydrolase	NA	NA	NA	NA
AZY32804.1\|248575_249277_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA
AZY32805.1\|249529_250579_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	5.6e-68	43.6
AZY32806.1\|250684_251626_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
AZY32807.1\|251622_253512_-	DNA mismatch repair protein MutL	A0A1B2LRQ5	Wolbachia_phage	3.3e-79	32.8
AZY32808.1\|253598_254237_+	hypothetical protein	NA	NA	NA	NA
AZY36015.1\|254379_255624_-	N-acetylmuramoyl-L-alanine amidase	A0A2H4JCM7	uncultured_Caudovirales_phage	4.1e-17	30.3
AZY32809.1\|255695_256232_-\|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
AZY32810.1\|256383_257775_+	class II fumarate hydratase	NA	NA	NA	NA
AZY32811.1\|257791_258772_-	AEC family transporter	NA	NA	NA	NA
AZY32812.1\|258907_259891_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA
AZY32813.1\|259955_260855_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY32814.1\|260961_262716_+	gamma-glutamyltransferase	NA	NA	NA	NA
AZY32815.1\|262723_263848_-	CoA transferase	NA	NA	NA	NA
AZY32816.1\|263861_264842_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY32817.1\|265572_266523_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY32818.1\|267082_267628_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA
AZY32819.1\|267711_269331_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA
AZY32820.1\|269346_270501_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
AZY32821.1\|270514_270640_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA
AZY32822.1\|270636_272388_+	thiol reductant ABC exporter subunit CydD	W8CYL7	Bacillus_phage	3.4e-09	23.8
AZY32823.1\|272384_274064_+	thiol reductant ABC exporter subunit CydC	W8CYL7	Bacillus_phage	3.6e-16	27.6
AZY32824.1\|274099_274675_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.4e-28	43.1
AZY32825.1\|275817_276096_+	DUF4148 domain-containing protein	NA	NA	NA	NA
AZY32826.1\|277139_278090_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY32827.1\|278076_278292_-	hypothetical protein	NA	NA	NA	NA
AZY32828.1\|278367_278529_+	DUF4224 domain-containing protein	NA	NA	NA	NA
AZY32829.1\|278536_278677_+	hypothetical protein	NA	NA	NA	NA
AZY32830.1\|279195_279645_-\|protease	ClpXP protease specificity-enhancing factor	NA	NA	NA	NA
AZY32831.1\|279654_280266_-	glutathione S-transferase	NA	NA	NA	NA
AZY32832.1\|280424_281279_-	cytochrome c1	NA	NA	NA	NA
AZY32833.1\|281298_282681_-	cytochrome b	NA	NA	NA	NA
AZY32834.1\|282745_283387_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA
AZY32835.1\|283526_283985_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
AZY32836.1\|284009_284786_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
AZY36016.1\|284839_285976_+	PDZ domain-containing protein	W5SAB9	Pithovirus	1.2e-07	31.2
AZY32837.1\|285972_286923_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

390856 : 448365

Orpheovirus(14.29%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY32936.1\|390856_391807_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY32937.1\|391943_392861_+	reductase	NA	NA	NA	NA
AZY32938.1\|392857_393106_+	glutaredoxin family protein	NA	NA	NA	NA
AZY32939.1\|393102_394308_+	CoA transferase	NA	NA	NA	NA
AZY32940.1\|394380_395376_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY32941.1\|395398_396619_-	CoA transferase	NA	NA	NA	NA
AZY32942.1\|396615_397260_-	hypothetical protein	NA	NA	NA	NA
AZY32943.1\|398990_399800_-	IclR family transcriptional regulator	NA	NA	NA	NA
AZY36022.1\|400017_401058_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	6.1e-59	42.5
AZY32944.1\|401156_402140_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY32945.1\|402066_402768_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY32946.1\|402816_403587_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AZY32947.1\|403583_404825_-	CoA transferase	NA	NA	NA	NA
AZY32948.1\|404929_406636_-	thiamine pyrophosphate-binding protein	NA	NA	NA	NA
AZY32949.1\|406632_407529_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY32950.1\|407569_409159_-	sulfurtransferase	NA	NA	NA	NA
AZY32951.1\|409208_410201_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY32952.1\|410269_410869_-	hypothetical protein	NA	NA	NA	NA
AZY36023.1\|411329_412307_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY32953.1\|412385_413336_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY32954.1\|413424_414339_+	EamA/RhaT family transporter	NA	NA	NA	NA
AZY32955.1\|414335_414995_+	LysE family translocator	NA	NA	NA	NA
AZY32956.1\|415084_416008_+	alpha/beta hydrolase	A0A1C9C5K3	Heterosigma_akashiwo_virus	4.8e-07	27.2
AZY32957.1\|416013_416469_-	hypothetical protein	NA	NA	NA	NA
AZY32958.1\|416465_417569_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA
AZY36024.1\|417488_417797_+	GtrA family protein	NA	NA	NA	NA
AZY32959.1\|417756_419376_-	phospholipid carrier-dependent glycosyltransferase	NA	NA	NA	NA
AZY32960.1\|419372_420431_-	glycosyltransferase	I1TED8	Salmonella_phage	2.8e-59	40.5
AZY32961.1\|420560_421055_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AZY32962.1\|421147_422125_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY32963.1\|422320_423526_+	sodium/glutamate symporter	NA	NA	NA	NA
AZY32964.1\|423522_425034_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA
AZY36025.1\|425049_426363_-	short-chain fatty acids transporter	NA	NA	NA	NA
AZY32965.1\|426553_426733_-	hypothetical protein	NA	NA	NA	NA
AZY32966.1\|427142_427877_-	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	1.4e-41	43.8
AZY32967.1\|430321_431272_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY32968.1\|431403_431802_-	GTP-binding protein	E4ZFJ7	Streptococcus_phage	9.0e-19	44.3
AZY32969.1\|432212_432683_-	universal stress protein	NA	NA	NA	NA
AZY32970.1\|432771_433116_-	TIGR01244 family phosphatase	NA	NA	NA	NA
AZY32971.1\|433215_434616_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
AZY32972.1\|436404_436923_-	MgtC/SapB family protein	G3MA03	Bacillus_virus	2.1e-12	38.9
AZY32973.1\|437033_437789_+	TerC family protein	A0A0R6PEZ3	Moraxella_phage	2.9e-42	40.8
AZY32974.1\|437984_439217_+	CoA transferase	NA	NA	NA	NA
AZY32975.1\|439209_439995_+	enoyl-CoA hydratase	NA	NA	NA	NA
AZY32976.1\|440061_441033_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY32977.1\|441043_442021_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY32978.1\|442146_443319_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AZY32979.1\|443345_444374_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AZY32980.1\|444439_445633_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA
AZY32981.1\|447414_448365_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

619752 : 720216

111

uncultured_Caudovirales_phage(13.79%)

tail,terminase,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY33132.1\|619752_620703_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33133.1\|621401_621785_+	hypothetical protein	NA	NA	NA	NA
AZY33134.1\|621842_622445_+	DUF2946 domain-containing protein	NA	NA	NA	NA
AZY36031.1\|622462_622864_-	DoxX family protein	NA	NA	NA	NA
AZY33135.1\|622997_623891_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY33136.1\|623887_624469_+	NUDIX hydrolase	NA	NA	NA	NA
AZY33137.1\|625263_625998_+	arginyltransferase	NA	NA	NA	NA
AZY33138.1\|626038_627088_+	dihydroorotate dehydrogenase (quinone)	NA	NA	NA	NA
AZY33139.1\|627235_627814_-	Phasin (PHA-granule associated protein)	NA	NA	NA	NA
AZY33140.1\|628200_629178_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA
AZY33141.1\|629271_633666_-	dermonecrotic toxin	NA	NA	NA	NA
AZY33142.1\|633866_634715_-	IclR family transcriptional regulator	NA	NA	NA	NA
AZY33143.1\|634873_635686_-	competence/damage-inducible protein A	NA	NA	NA	NA
AZY33144.1\|635741_636692_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33145.1\|636790_637591_-	hypothetical protein	NA	NA	NA	NA
AZY33146.1\|637652_638036_+	thioredoxin	NA	NA	NA	NA
AZY33147.1\|638047_639481_-	ATP-dependent helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.5e-52	34.4
AZY33148.1\|639687_640017_-	AzlD domain-containing protein	NA	NA	NA	NA
AZY36032.1\|640019_640688_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY33149.1\|640951_641872_+	branched-chain amino acid transaminase	NA	NA	NA	NA
AZY33150.1\|641918_642131_+	zinc-finger domain-containing protein	NA	NA	NA	NA
AZY33151.1\|642153_642576_+	DUF4440 domain-containing protein	NA	NA	NA	NA
AZY33152.1\|642592_643693_+	alpha/beta hydrolase	NA	NA	NA	NA
AZY33153.1\|643789_645307_-	peptidase	NA	NA	NA	NA
AZY33154.1\|645382_646222_+	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	1.1e-66	48.9
AZY33155.1\|646243_647125_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA
AZY33156.1\|647206_648301_-	porin	NA	NA	NA	NA
AZY33157.1\|648594_649545_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY36033.1\|649619_650561_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33158.1\|650644_651004_-	hypothetical protein	NA	NA	NA	NA
AZY33159.1\|651385_652423_-	hypothetical protein	NA	NA	NA	NA
AZY33160.1\|652739_654080_+	peptidase M24 family protein	NA	NA	NA	NA
AZY33161.1\|654089_654542_-	hypothetical protein	NA	NA	NA	NA
AZY33162.1\|654638_655820_+	monooxygenase	NA	NA	NA	NA
AZY33163.1\|655879_656911_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
AZY33164.1\|656951_657191_+	Fis family transcriptional regulator	NA	NA	NA	NA
AZY33165.1\|657260_658850_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	Q58MG4	Prochlorococcus_phage	8.7e-65	47.2
AZY33166.1\|658849_659398_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
AZY33167.1\|659478_660051_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
AZY33168.1\|660069_660981_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA
AZY33169.1\|661054_662023_-	threonine/serine dehydratase	NA	NA	NA	NA
AZY33170.1\|662145_663219_+	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	2.3e-08	25.7
AZY33171.1\|663223_665044_-	DNA helicase RecQ	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	3.1e-74	35.3
AZY33172.1\|665120_666071_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33173.1\|666159_666495_+	ASCH domain-containing protein	NA	NA	NA	NA
AZY33174.1\|666628_667279_+	carbonic anhydrase	NA	NA	NA	NA
AZY33175.1\|667300_668719_-	amidase	NA	NA	NA	NA
AZY33176.1\|668788_669544_-	hypothetical protein	NA	NA	NA	NA
AZY36034.1\|669512_670271_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY33177.1\|670281_671163_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY33178.1\|671179_671887_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.2e-07	25.4
AZY33179.1\|671889_672648_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	4.4e-14	24.4
AZY33180.1\|672857_674600_+	nitrite/sulfite reductase	NA	NA	NA	NA
AZY33181.1\|674592_675117_+	DUF934 domain-containing protein	NA	NA	NA	NA
AZY33182.1\|675156_675951_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY33183.1\|676118_677192_+	hypothetical protein	NA	NA	NA	NA
AZY33184.1\|677290_678241_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33185.1\|678492_678705_-	hypothetical protein	NA	NA	NA	NA
AZY36035.1\|678770_679382_-	LexA family transcriptional repressor	NA	NA	NA	NA
AZY33186.1\|679861_680182_-	hypothetical protein	NA	NA	NA	NA
AZY33187.1\|680174_680873_-	hypothetical protein	NA	NA	NA	NA
AZY33188.1\|680887_681109_-	hypothetical protein	NA	NA	NA	NA
AZY33189.1\|681126_682077_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY36036.1\|682752_683202_+\|terminase	terminase	C7U0W1	Enterobacteria_phage	5.2e-39	61.5
AZY33190.1\|683188_684466_+\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	2.4e-150	64.7
AZY33191.1\|684468_685887_+	DUF4055 domain-containing protein	R9TF43	Synechococcus_phage	2.2e-99	42.1
AZY36037.1\|685915_686971_+	hypothetical protein	A0A0H5BBX3	Pseudomonas_phage	2.6e-97	50.6
AZY33192.1\|686976_687219_+	hypothetical protein	A0A0H5AUE5	Pseudomonas_phage	5.6e-16	53.2
AZY33193.1\|687341_687944_+	hypothetical protein	R9TF81	Synechococcus_phage	7.9e-27	43.6
AZY33194.1\|688372_689323_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33195.1\|689340_689988_+	hypothetical protein	R9TJ64	Synechococcus_phage	2.7e-65	71.1
AZY33196.1\|689997_690249_+	hypothetical protein	NA	NA	NA	NA
AZY33197.1\|690311_690794_+	hypothetical protein	A0A2H4JE38	uncultured_Caudovirales_phage	1.8e-13	37.1
AZY33198.1\|690795_690996_+	hypothetical protein	NA	NA	NA	NA
AZY33199.1\|690995_691391_+	hypothetical protein	A0A2D2W284	Stenotrophomonas_phage	7.8e-07	35.0
AZY33200.1\|691387_691786_+	hypothetical protein	I6PCW1	Cronobacter_phage	4.2e-16	38.0
AZY33201.1\|691782_692205_+	hypothetical protein	NA	NA	NA	NA
AZY33202.1\|692212_692713_+	HNH endonuclease	A0A1I9SEX5	Klebsiella_phage	4.4e-31	45.1
AZY33203.1\|692967_693486_+\|tail	phage tail protein	A0A1S5R1H0	Pseudomonas_phage	5.4e-24	38.3
AZY33204.1\|693495_693825_+	hypothetical protein	A0A2H4J121	uncultured_Caudovirales_phage	2.9e-15	44.0
AZY33205.1\|693842_694133_+	hypothetical protein	A0A2H4JBP7	uncultured_Caudovirales_phage	3.7e-14	45.2
AZY33206.1\|694158_696771_+\|tail	phage tail tape measure protein	A0A2H4J107	uncultured_Caudovirales_phage	4.9e-105	38.6
AZY33207.1\|696780_697140_+	hypothetical protein	NA	NA	NA	NA
AZY33208.1\|697207_697741_+	DUF1833 domain-containing protein	A5A3Q9	Burkholderia_phage	1.1e-40	46.9
AZY33209.1\|697737_698127_+	hypothetical protein	A0A0G3EYJ9	Achromobacter_phage	3.0e-35	50.0
AZY33210.1\|698119_702076_+	DUF1983 domain-containing protein	A0A0B5A1N2	Achromobacter_phage	3.9e-215	40.8
AZY33211.1\|702080_702497_+	hypothetical protein	NA	NA	NA	NA
AZY33212.1\|702715_702979_+	hypothetical protein	A0A1B0V3F2	Roseobacter_phage	7.2e-09	41.8
AZY33213.1\|702978_703791_+	hypothetical protein	NA	NA	NA	NA
AZY33214.1\|703795_704038_+	hypothetical protein	NA	NA	NA	NA
AZY33215.1\|704016_704568_+	lysozyme	NA	NA	NA	NA
AZY33216.1\|704549_705083_+	DUF2514 domain-containing protein	NA	NA	NA	NA
AZY33217.1\|705079_705361_-	hypothetical protein	NA	NA	NA	NA
AZY33218.1\|705703_705904_+	hypothetical protein	NA	NA	NA	NA
AZY33219.1\|705910_706582_-	SOS response-associated peptidase	Q5QF62	Pseudomonas_virus	4.7e-36	39.9
AZY33220.1\|706937_707624_-	DNA-binding response regulator	NA	NA	NA	NA
AZY33221.1\|707604_708177_-	RNA pyrophosphohydrolase	NA	NA	NA	NA
AZY33222.1\|708242_709973_+\|tRNA	proline--tRNA ligase	A0A2K9L3R9	Tupanvirus	4.6e-11	29.4
AZY33223.1\|710025_710454_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA
AZY33224.1\|710456_711137_+	protein TolQ	NA	NA	NA	NA
AZY33225.1\|711136_711595_+	protein TolR	NA	NA	NA	NA
AZY33226.1\|711631_712606_+	cell envelope integrity protein TolA	NA	NA	NA	NA
AZY33227.1\|712622_713939_+	protein TolB	NA	NA	NA	NA
AZY33228.1\|713970_714468_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA
AZY33229.1\|714554_715244_+	tol-pal system protein YbgF	NA	NA	NA	NA
AZY33230.1\|715243_716293_+	iron ABC transporter permease	NA	NA	NA	NA
AZY33231.1\|716289_717084_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-15	30.6
AZY33232.1\|717252_717603_+	hypothetical protein	NA	NA	NA	NA
AZY33233.1\|717578_718136_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY33234.1\|719060_719279_+	hypothetical protein	NA	NA	NA	NA
AZY33235.1\|719265_720216_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

747141 : 820303

Streptococcus_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY33256.1\|747141_748092_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33257.1\|748746_749844_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA
AZY33258.1\|749877_751143_+	saccharopine dehydrogenase	NA	NA	NA	NA
AZY33259.1\|751300_752251_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33260.1\|752494_753085_+	polyisoprenoid-binding protein	NA	NA	NA	NA
AZY36039.1\|753100_755545_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
AZY33261.1\|755664_756636_-	FecR family protein	NA	NA	NA	NA
AZY33262.1\|756767_757292_+	RNA polymerase subunit sigma	NA	NA	NA	NA
AZY33263.1\|757251_758202_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33264.1\|758423_760619_-	DNA methylase	NA	NA	NA	NA
AZY33265.1\|760691_761099_-	XRE family transcriptional regulator	NA	NA	NA	NA
AZY33266.1\|761221_762172_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33267.1\|762287_762731_-	transcriptional regulator	NA	NA	NA	NA
AZY33268.1\|762793_763588_+	DNA-binding response regulator	NA	NA	NA	NA
AZY33269.1\|763753_764890_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	5.8e-63	44.8
AZY33270.1\|764960_766094_-	GTPase ObgE	NA	NA	NA	NA
AZY33271.1\|766243_766504_-	50S ribosomal protein L27	NA	NA	NA	NA
AZY33272.1\|766537_766849_-	50S ribosomal protein L21	NA	NA	NA	NA
AZY33273.1\|767273_768422_+	fumarylacetoacetate hydrolase	NA	NA	NA	NA
AZY33274.1\|768536_769502_+	octaprenyl diphosphate synthase	NA	NA	NA	NA
AZY33275.1\|769770_770637_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY33276.1\|770767_772816_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA
AZY33277.1\|772833_774831_+	hydantoin utilization protein B	NA	NA	NA	NA
AZY33278.1\|774865_776203_+	FAD-binding oxidoreductase	NA	NA	NA	NA
AZY33279.1\|776465_778319_+	hypothetical protein	NA	NA	NA	NA
AZY33280.1\|778373_779855_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
AZY33281.1\|779870_780458_-	cyclolysin-activating lysine-acyltransferase CyaC	NA	NA	NA	NA
AZY36040.1\|780540_780720_+	hypothetical protein	NA	NA	NA	NA
AZY33282.1\|780906_786027_+	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA
AZY33283.1\|786104_788243_+	cyclolysin secretion/processing ATP-binding protein CyaB	W8CYL7	Bacillus_phage	2.7e-45	29.2
AZY33284.1\|788239_789562_+	protein CyaD	NA	NA	NA	NA
AZY33285.1\|789563_790988_+	protein CyaE	NA	NA	NA	NA
AZY33286.1\|791078_791987_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY33287.1\|792051_792966_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY33288.1\|793803_794487_+	amino acid ABC transporter permease	NA	NA	NA	NA
AZY33289.1\|794503_795247_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.5e-32	42.4
AZY33290.1\|795276_796137_+	aminotransferase	NA	NA	NA	NA
AZY33291.1\|796144_796711_-	hypothetical protein	NA	NA	NA	NA
AZY33292.1\|796799_797756_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY33293.1\|797800_798553_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZY33294.1\|798549_800295_-	acetolactate synthase catalytic subunit	NA	NA	NA	NA
AZY33295.1\|800379_801114_+	GntR family transcriptional regulator	NA	NA	NA	NA
AZY33296.1\|801430_802453_+	autotransporter domain-containing protein	NA	NA	NA	NA
AZY33297.1\|802468_803191_-	GntR family transcriptional regulator	NA	NA	NA	NA
AZY33298.1\|803335_804343_-	zinc-binding dehydrogenase	NA	NA	NA	NA
AZY33299.1\|804383_805916_-	long-chain fatty acid--CoA ligase	NA	NA	NA	NA
AZY33300.1\|805912_807031_-	DUF2817 domain-containing protein	NA	NA	NA	NA
AZY33301.1\|807027_807810_-	ABC transporter permease	NA	NA	NA	NA
AZY33302.1\|807821_808685_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.6e-34	38.9
AZY36041.1\|808703_809801_-	hypothetical protein	NA	NA	NA	NA
AZY33303.1\|809869_810796_-	VOC family protein	NA	NA	NA	NA
AZY33304.1\|810830_812525_-	thiamine pyrophosphate-binding protein	NA	NA	NA	NA
AZY33305.1\|812724_813660_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
AZY33306.1\|813765_814716_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33307.1\|814814_815471_-	DUF4136 domain-containing protein	NA	NA	NA	NA
AZY33308.1\|815618_818327_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	2.8e-15	24.0
AZY33309.1\|818336_819356_+	fructose 1,6-bisphosphatase	A0A1V0SKX4	Klosneuvirus	1.5e-49	35.7
AZY33310.1\|819352_820303_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

853050 : 902314

Vibrio_phage(33.33%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY33339.1\|853050_854001_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY36042.1\|853973_854573_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY33340.1\|854574_855009_+	PaaI family thioesterase	NA	NA	NA	NA
AZY33341.1\|855005_855440_+	hypothetical protein	NA	NA	NA	NA
AZY33342.1\|855423_856227_-	phosphatase PAP2 family protein	NA	NA	NA	NA
AZY33343.1\|856243_857059_-	DNA repair exonuclease	NA	NA	NA	NA
AZY33344.1\|857055_857871_-	diacylglycerol kinase	NA	NA	NA	NA
AZY33345.1\|858017_858719_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY33346.1\|858746_860705_-\|holin	choline transporter	A0A2I7QNT1	Vibrio_phage	8.0e-28	30.3
AZY33347.1\|860787_861738_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33348.1\|861958_862627_+	transcriptional regulator	NA	NA	NA	NA
AZY33349.1\|862750_863857_+	MexH family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AZY33350.1\|863869_866983_+	MexW/MexI family multidrug efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	4.5e-57	21.5
AZY33351.1\|866979_868473_+	RND transporter	NA	NA	NA	NA
AZY33352.1\|868487_869159_+	transcriptional regulator	NA	NA	NA	NA
AZY33353.1\|869202_869697_-	azurin	NA	NA	NA	NA
AZY33354.1\|869837_870485_-	transcriptional regulator	NA	NA	NA	NA
AZY36043.1\|870588_872637_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA
AZY33355.1\|872633_874646_+	hydantoin utilization protein B	NA	NA	NA	NA
AZY33356.1\|874671_876006_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
AZY33357.1\|876114_877107_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY33358.1\|877173_879258_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
AZY33359.1\|879282_880254_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY33360.1\|880382_881384_-	peptidase M14	NA	NA	NA	NA
AZY33361.1\|881417_882659_-	cystathionine beta-lyase	NA	NA	NA	NA
AZY33362.1\|882739_883663_+	transcriptional regulator LrhA	NA	NA	NA	NA
AZY33363.1\|883740_884565_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AZY36044.1\|884761_885778_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY33364.1\|885974_886958_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY33365.1\|888556_889945_-	MmgE/PrpD family protein	NA	NA	NA	NA
AZY33366.1\|889975_890965_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY33367.1\|891075_892308_-	methylaspartate ammonia-lyase	NA	NA	NA	NA
AZY33368.1\|892589_893390_+	IclR family transcriptional regulator	NA	NA	NA	NA
AZY33369.1\|893412_895644_-\|holin	high-affinity choline transporter BetT	NA	NA	NA	NA
AZY33370.1\|896431_896878_-	preprotein translocase subunit SecG	NA	NA	NA	NA
AZY33371.1\|896899_897646_-	triose-phosphate isomerase	NA	NA	NA	NA
AZY33372.1\|897789_898767_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA
AZY33373.1\|899400_900012_+	PIN domain-containing protein	K4HZX4	Acidithiobacillus_phage	3.3e-12	32.5
AZY33374.1\|900005_901223_-	threonine ammonia-lyase	NA	NA	NA	NA
AZY33375.1\|901363_902314_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

911926 : 976866

Bacillus_phage(18.18%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY33384.1\|911926_912877_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33385.1\|912873_914724_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.3e-27	26.4
AZY33386.1\|915104_915764_+	thiopurine S-methyltransferase	NA	NA	NA	NA
AZY33387.1\|915851_916004_+	hypothetical protein	NA	NA	NA	NA
AZY33388.1\|916112_916280_+	hypothetical protein	NA	NA	NA	NA
AZY33389.1\|916291_916972_-	DUF3313 domain-containing protein	NA	NA	NA	NA
AZY33390.1\|917253_917970_+	flagellar brake protein	NA	NA	NA	NA
AZY33391.1\|917984_919286_-	phospholipase	NA	NA	NA	NA
AZY33392.1\|921430_924319_+	HD domain-containing protein	NA	NA	NA	NA
AZY33393.1\|924542_925895_+	MmgE/PrpD family protein	NA	NA	NA	NA
AZY33394.1\|925923_926445_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
AZY33395.1\|926441_927896_+	carboxylase	NA	NA	NA	NA
AZY33396.1\|927930_928179_+	hypothetical protein	NA	NA	NA	NA
AZY33397.1\|928284_929160_+	hypothetical protein	NA	NA	NA	NA
AZY33398.1\|929185_930241_+	hypothetical protein	NA	NA	NA	NA
AZY33399.1\|930253_931045_+	GntR family transcriptional regulator	NA	NA	NA	NA
AZY33400.1\|931077_932448_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
AZY33401.1\|933624_934575_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33402.1\|934627_934849_+	hypothetical protein	NA	NA	NA	NA
AZY33403.1\|935008_935221_+	hypothetical protein	NA	NA	NA	NA
AZY33404.1\|935340_936459_+	mannose-6-phosphate isomerase	NA	NA	NA	NA
AZY33405.1\|936555_936771_+	hypothetical protein	NA	NA	NA	NA
AZY33406.1\|936964_937216_+	hypothetical protein	NA	NA	NA	NA
AZY33407.1\|937328_938279_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33408.1\|938275_938659_-	ferredoxin	NA	NA	NA	NA
AZY33409.1\|938713_940531_-	ABC transporter ATP-binding protein/permease	W8CYL7	Bacillus_phage	5.7e-44	27.9
AZY36046.1\|940677_941505_+	oxidoreductase	A0A2H4PQR8	Staphylococcus_phage	1.7e-67	47.4
AZY33410.1\|941550_942531_+	aldo/keto reductase	NA	NA	NA	NA
AZY33411.1\|942527_942740_-	hypothetical protein	NA	NA	NA	NA
AZY33412.1\|942736_943918_-	PepSY domain-containing protein	NA	NA	NA	NA
AZY33413.1\|944081_944816_+	serine/threonine protein phosphatase	A0A2H4J0P0	uncultured_Caudovirales_phage	1.9e-62	49.2
AZY33414.1\|944817_947430_-	penicillin-binding protein	NA	NA	NA	NA
AZY33415.1\|947565_949479_-	S9 family peptidase	NA	NA	NA	NA
AZY33416.1\|950094_950505_-	PaaI family thioesterase	NA	NA	NA	NA
AZY33417.1\|950602_951688_+	DNA polymerase IV	NA	NA	NA	NA
AZY33418.1\|951786_952737_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33419.1\|952733_953708_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY33420.1\|953832_954744_+	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	4.4e-05	27.6
AZY36047.1\|955020_955413_-	type II toxin-antitoxin system HicB family antitoxin	A0A0R6PJ17	Moraxella_phage	4.8e-25	45.0
AZY33421.1\|955542_956493_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33422.1\|956522_956705_-	addiction module toxin, HicA family	A0A1L2JY37	Aeribacillus_phage	3.7e-12	56.1
AZY33423.1\|956743_957001_-	hypothetical protein	NA	NA	NA	NA
AZY33424.1\|957477_958659_-	MFS transporter	NA	NA	NA	NA
AZY33425.1\|958874_959552_-	phosphoglycolate phosphatase	NA	NA	NA	NA
AZY33426.1\|959548_960322_-	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA
AZY33427.1\|960399_960981_-	OmpA family protein	NA	NA	NA	NA
AZY33428.1\|961351_964033_+	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	3.2e-104	33.5
AZY33429.1\|964032_965166_+	phosphoserine aminotransferase	M1Q1P2	Streptococcus_phage	6.4e-78	44.0
AZY33430.1\|965158_966244_+	prephenate dehydratase	NA	NA	NA	NA
AZY33431.1\|966330_967230_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA
AZY33432.1\|967226_968555_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
AZY33433.1\|968569_969241_+	cytidylate kinase	NA	NA	NA	NA
AZY33434.1\|969413_971144_+	30S ribosomal protein S1	NA	NA	NA	NA
AZY33435.1\|971145_971505_+	integration host factor subunit beta	NA	NA	NA	NA
AZY33436.1\|971696_972011_+	DUF1049 domain-containing protein	NA	NA	NA	NA
AZY33437.1\|972053_973274_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA
AZY33438.1\|973270_974212_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	1.5e-16	28.1
AZY33439.1\|974208_975198_+	ADP-L-glycero-D-mannoheptose-6-epimerase	E3SJ87	Synechococcus_phage	2.2e-26	34.4
AZY33440.1\|975232_975817_+	DUF655 domain-containing protein	NA	NA	NA	NA
AZY33441.1\|975915_976866_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

996266 : 1059417

Enterococcus_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY33456.1\|996266_997217_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33457.1\|997321_998371_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA
AZY36049.1\|998508_999525_-\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AZY33458.1\|1001033_1001606_-	chorismate--pyruvate lyase	NA	NA	NA	NA
AZY33459.1\|1001665_1002397_+	rRNA pseudouridine synthase	NA	NA	NA	NA
AZY36050.1\|1002448_1003366_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY33460.1\|1004173_1007353_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AZY33461.1\|1007349_1008732_+	multidrug transporter	NA	NA	NA	NA
AZY33462.1\|1008801_1009053_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
AZY33463.1\|1009198_1009849_-	SCO family protein	NA	NA	NA	NA
AZY33464.1\|1009999_1012114_-	M3 family peptidase	NA	NA	NA	NA
AZY33465.1\|1012189_1013041_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	2.1e-33	39.8
AZY33466.1\|1013037_1013664_-	DNA-binding response regulator	NA	NA	NA	NA
AZY33467.1\|1013660_1015415_-	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA
AZY33468.1\|1015707_1018413_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA
AZY33469.1\|1018425_1020087_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA
AZY33470.1\|1020099_1021890_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.4e-39	25.2
AZY33471.1\|1022111_1023287_-	flagellin FliC	NA	NA	NA	NA
AZY33472.1\|1023329_1024280_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33473.1\|1024378_1025119_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
AZY33474.1\|1025313_1027350_+	transketolase	NA	NA	NA	NA
AZY33475.1\|1027367_1028378_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
AZY33476.1\|1028495_1029689_+	phosphoglycerate kinase	NA	NA	NA	NA
AZY33477.1\|1029718_1030492_-	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA
AZY33478.1\|1030488_1031679_-	acetate kinase	NA	NA	NA	NA
AZY33479.1\|1031704_1032643_-	phosphate acetyltransferase	NA	NA	NA	NA
AZY36051.1\|1032639_1034988_-	DUF3141 domain-containing protein	NA	NA	NA	NA
AZY33480.1\|1035142_1035850_-	glutathione S-transferase	NA	NA	NA	NA
AZY33481.1\|1035887_1037021_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33482.1\|1037297_1037846_-	damage-inducible protein DinB	NA	NA	NA	NA
AZY33483.1\|1037864_1038350_-	N-acetyltransferase	NA	NA	NA	NA
AZY33484.1\|1038527_1039466_+	curved DNA-binding protein	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	5.6e-11	24.1
AZY33485.1\|1039468_1039786_+	MerR family transcriptional regulator	NA	NA	NA	NA
AZY33486.1\|1039831_1040776_+	hypothetical protein	NA	NA	NA	NA
AZY33487.1\|1042456_1043107_+	molybdopterin adenylyltransferase	NA	NA	NA	NA
AZY33488.1\|1043160_1043496_+	hypothetical protein	NA	NA	NA	NA
AZY33489.1\|1043492_1044353_+	M23 family peptidase	A0A292GJG6	Xanthomonas_phage	2.6e-15	36.1
AZY33490.1\|1044369_1044651_-	hypothetical protein	NA	NA	NA	NA
AZY33491.1\|1044724_1044988_-	translation initiation factor IF-1	NA	NA	NA	NA
AZY33492.1\|1045231_1046182_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33493.1\|1046480_1047218_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA
AZY33494.1\|1047653_1047977_+	flagellar transcriptional activator FlhD	NA	NA	NA	NA
AZY33495.1\|1048011_1048572_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
AZY33496.1\|1048692_1049568_+	flagellar motor stator protein MotA	NA	NA	NA	NA
AZY33497.1\|1049580_1050528_+	motility protein MotB	NA	NA	NA	NA
AZY33498.1\|1050629_1050923_+	response regulator	NA	NA	NA	NA
AZY33499.1\|1050949_1053007_+	chemotaxis protein CheA	NA	NA	NA	NA
AZY33500.1\|1053021_1053522_+	chemotaxis protein CheW	NA	NA	NA	NA
AZY33501.1\|1053595_1055302_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.4e-12	41.7
AZY33502.1\|1056165_1057218_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA
AZY33503.1\|1057270_1057660_+	chemotaxis protein CheY	Q56AR1	Bacillus_thuringiensis_phage	5.7e-10	33.3
AZY33504.1\|1057668_1058301_+	protein phosphatase CheZ	NA	NA	NA	NA
AZY36052.1\|1058400_1059417_-\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_10

1065401 : 1125464

uncultured_Mediterranean_phage(37.5%)

holin,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY33509.1\|1065401_1066829_-\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
AZY36054.1\|1067766_1068783_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY33510.1\|1069115_1070051_-	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	3.0e-41	35.5
AZY33511.1\|1070100_1071981_-	protein translocase subunit SecD	NA	NA	NA	NA
AZY33512.1\|1072047_1072392_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	1.0e-10	40.4
AZY33513.1\|1072536_1073673_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.9e-85	44.4
AZY33514.1\|1073669_1074743_-\|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	NA	NA	NA	NA
AZY33515.1\|1074900_1076337_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA
AZY36055.1\|1076427_1077069_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
AZY36056.1\|1077404_1078421_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY33516.1\|1080297_1080477_+	hypothetical protein	NA	NA	NA	NA
AZY36057.1\|1080463_1081414_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY36058.1\|1082616_1084038_-	siroheme synthase	NA	NA	NA	NA
AZY33517.1\|1084301_1085018_+	hypothetical protein	NA	NA	NA	NA
AZY33518.1\|1085102_1085420_+	DUF883 domain-containing protein	NA	NA	NA	NA
AZY33519.1\|1085460_1085874_+\|holin	phage holin family protein	NA	NA	NA	NA
AZY33520.1\|1085875_1086235_+	hypothetical protein	NA	NA	NA	NA
AZY33521.1\|1086277_1087822_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA
AZY33522.1\|1087905_1088736_+	transglycosylase	NA	NA	NA	NA
AZY33523.1\|1088770_1089925_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
AZY33524.1\|1089967_1090840_+	hypothetical protein	NA	NA	NA	NA
AZY33525.1\|1090956_1093245_+	NADP-dependent malic enzyme	NA	NA	NA	NA
AZY33526.1\|1094451_1094916_+	barstar family protein 2	NA	NA	NA	NA
AZY33527.1\|1094942_1095893_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY36059.1\|1096260_1097037_-	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.3e-17	28.7
AZY33528.1\|1097081_1097939_-	phosphate ABC transporter, permease protein PstA	NA	NA	NA	NA
AZY33529.1\|1097960_1098977_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
AZY33530.1\|1099111_1100152_-	phosphate ABC transporter substrate-binding protein PstS	M4QHS4	Cyanophage	2.1e-51	40.2
AZY33531.1\|1100346_1102428_-	polyphosphate kinase 1	NA	NA	NA	NA
AZY33532.1\|1102663_1104157_+	exopolyphosphatase	NA	NA	NA	NA
AZY33533.1\|1104387_1105182_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AZY33534.1\|1105402_1106761_-	phosphoglucosamine mutase	NA	NA	NA	NA
AZY33535.1\|1106757_1107600_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	3.2e-26	32.5
AZY33536.1\|1107618_1109505_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	M4QMW8	Micromonas_pusilla_virus	1.4e-109	41.5
AZY33537.1\|1109742_1110375_-	ribosomal RNA large subunit methyltransferase E	NA	NA	NA	NA
AZY33538.1\|1110393_1110996_+	hypothetical protein	NA	NA	NA	NA
AZY33539.1\|1111147_1112098_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33540.1\|1112900_1113701_-	hypothetical protein	NA	NA	NA	NA
AZY33541.1\|1113744_1114731_-	homoserine kinase	NA	NA	NA	NA
AZY33542.1\|1114870_1115884_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
AZY33543.1\|1115880_1116831_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33544.1\|1116943_1117402_-	CBS domain-containing protein	NA	NA	NA	NA
AZY33545.1\|1117438_1118752_-	hypothetical protein	NA	NA	NA	NA
AZY33546.1\|1118769_1119141_+	DUF2069 domain-containing protein	NA	NA	NA	NA
AZY33547.1\|1119137_1120601_+	YdiU family protein	A0A075BSJ0	Microcystis_phage	1.7e-43	32.5
AZY33548.1\|1120693_1121470_+	DNA-binding response regulator	NA	NA	NA	NA
AZY33549.1\|1121451_1124331_-	diguanylate phosphodiesterase	NA	NA	NA	NA
AZY33550.1\|1124513_1125464_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_11

1156530 : 1218803

Erysipelothrix_phage(33.33%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY33572.1\|1156530_1157481_-\|transposase	IS481 family transposase IS481v2	NA	NA	NA	NA
AZY33573.1\|1157579_1158212_-	fimbrial protein	NA	NA	NA	NA
AZY33574.1\|1158376_1160659_-	NADP-dependent malic enzyme	NA	NA	NA	NA
AZY33575.1\|1160813_1163510_-	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA
AZY33576.1\|1163635_1164124_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AZY33577.1\|1166308_1167259_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33578.1\|1167583_1170454_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA
AZY33579.1\|1170499_1171714_+	dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA
AZY33580.1\|1171943_1173371_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.1e-41	28.1
AZY33581.1\|1173411_1174560_+	cell division protein ZapE	NA	NA	NA	NA
AZY33582.1\|1174572_1175331_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZY33583.1\|1175418_1176321_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY33584.1\|1176317_1177268_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33585.1\|1177397_1178381_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY33586.1\|1178435_1179158_-	short-chain dehydrogenase	NA	NA	NA	NA
AZY33587.1\|1180636_1181992_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
AZY33588.1\|1182072_1184448_-	protein tex	NA	NA	NA	NA
AZY33589.1\|1184612_1186688_+	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	2.4e-75	30.0
AZY33590.1\|1186749_1187550_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AZY33591.1\|1187651_1188614_+	RluA family pseudouridine synthase	NA	NA	NA	NA
AZY33592.1\|1188601_1189357_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA
AZY33593.1\|1189464_1191102_+	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA
AZY33594.1\|1191169_1191907_+	beta-ketoacyl-ACP reductase	NA	NA	NA	NA
AZY33595.1\|1192009_1192585_+	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA
AZY33596.1\|1192757_1193294_+	hypothetical protein	NA	NA	NA	NA
AZY33597.1\|1193296_1193641_+	cupredoxin domain-containing protein	NA	NA	NA	NA
AZY33598.1\|1193656_1194502_+	FTR1 family iron permease	NA	NA	NA	NA
AZY33599.1\|1194540_1195920_+	4Fe-4S binding domain-containing protein	NA	NA	NA	NA
AZY33600.1\|1195997_1196879_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
AZY33601.1\|1196977_1197928_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33602.1\|1197924_1198335_-	VOC family protein	NA	NA	NA	NA
AZY33603.1\|1198442_1199297_-	2-pyrone-4,6-dicarboxylate hydrolase	NA	NA	NA	NA
AZY33604.1\|1199289_1200252_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY33605.1\|1200297_1201422_-	mandelate racemase/muconate lactonizing enzyme family protein	Q6A202	Oenococcus_phage	1.5e-31	28.3
AZY36061.1\|1201533_1202406_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY33606.1\|1202530_1203310_+	short-chain dehydrogenase	NA	NA	NA	NA
AZY33607.1\|1203463_1204885_+	MFS transporter	NA	NA	NA	NA
AZY33608.1\|1205319_1207017_+	sodium:proline symporter	NA	NA	NA	NA
AZY33609.1\|1207045_1207168_+	hypothetical protein	NA	NA	NA	NA
AZY36062.1\|1207243_1208185_-	LD-carboxypeptidase	NA	NA	NA	NA
AZY33610.1\|1208511_1209258_+	hypothetical protein	NA	NA	NA	NA
AZY33611.1\|1209265_1210192_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY33612.1\|1210313_1211231_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZY33613.1\|1211270_1212224_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY33614.1\|1212248_1212827_+	amino acid synthesis family protein	NA	NA	NA	NA
AZY33615.1\|1214500_1215109_+	hypothetical protein	NA	NA	NA	NA
AZY33616.1\|1215186_1215540_-	hypothetical protein	NA	NA	NA	NA
AZY33617.1\|1215623_1216613_-	succinylglutamate desuccinylase	NA	NA	NA	NA
AZY33618.1\|1216815_1217766_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33619.1\|1217852_1218803_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_12

1270677 : 1327888

Klosneuvirus(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY33657.1\|1270677_1271628_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33658.1\|1275374_1275986_-	DUF2239 domain-containing protein	NA	NA	NA	NA
AZY33659.1\|1276208_1277669_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.6e-97	41.3
AZY33660.1\|1277765_1279358_+	GMP synthase (glutamine-hydrolyzing)	A0A1V0SH76	Hokovirus	1.0e-17	33.3
AZY33661.1\|1279344_1279623_+	hypothetical protein	NA	NA	NA	NA
AZY33662.1\|1279681_1279969_+	XRE family transcriptional regulator	NA	NA	NA	NA
AZY33663.1\|1279970_1281311_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
AZY33664.1\|1281406_1282096_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY33665.1\|1282108_1283539_+	MFS transporter	NA	NA	NA	NA
AZY33666.1\|1285263_1286085_+	IclR family transcriptional regulator	NA	NA	NA	NA
AZY33667.1\|1286095_1287667_+	amidohydrolase	NA	NA	NA	NA
AZY33668.1\|1287695_1288673_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY33669.1\|1288699_1289503_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.7e-30	38.2
AZY33670.1\|1289499_1290294_+	ABC transporter permease	NA	NA	NA	NA
AZY33671.1\|1290301_1291537_+	DUF521 domain-containing protein	NA	NA	NA	NA
AZY33672.1\|1291529_1291964_+	DUF126 domain-containing protein	NA	NA	NA	NA
AZY33673.1\|1292713_1293664_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33674.1\|1294285_1296013_-	sodium-independent anion transporter	NA	NA	NA	NA
AZY33675.1\|1296124_1297483_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
AZY33676.1\|1297603_1297789_+	hypothetical protein	NA	NA	NA	NA
AZY33677.1\|1297775_1298726_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33678.1\|1298766_1299837_+	FUSC family protein	NA	NA	NA	NA
AZY36064.1\|1299859_1300738_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
AZY33679.1\|1300909_1301881_+	AraC family transcriptional regulator	NA	NA	NA	NA
AZY33680.1\|1302043_1302886_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY33681.1\|1303047_1303728_+	anti-sigma factor	NA	NA	NA	NA
AZY33682.1\|1303721_1304891_+	amine oxidase	NA	NA	NA	NA
AZY33683.1\|1304887_1305919_+	alcohol dehydrogenase	A0A2K9L339	Tupanvirus	1.8e-26	27.8
AZY33684.1\|1305962_1307204_+	MFS transporter	NA	NA	NA	NA
AZY33685.1\|1307238_1308771_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
AZY33686.1\|1308851_1309475_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA
AZY33687.1\|1309505_1310117_+	LysE family translocator	NA	NA	NA	NA
AZY33688.1\|1310152_1310623_+	DUF1801 domain-containing protein	NA	NA	NA	NA
AZY33689.1\|1311054_1312059_+	peptidase M20	NA	NA	NA	NA
AZY33690.1\|1312095_1313610_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY33691.1\|1313613_1314573_+	ABC transporter permease	NA	NA	NA	NA
AZY33692.1\|1314601_1315405_+	ABC transporter permease	NA	NA	NA	NA
AZY33693.1\|1315406_1317041_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.9e-15	31.1
AZY33694.1\|1317124_1318186_+	LacI family transcriptional regulator	NA	NA	NA	NA
AZY33695.1\|1318384_1318654_+	hypothetical protein	NA	NA	NA	NA
AZY33696.1\|1318657_1319182_+	DNA-binding protein	J9Q7G7	Salmonella_phage	6.5e-09	32.9
AZY33697.1\|1319597_1320548_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33698.1\|1320544_1321615_-	metal-dependent hydrolase	NA	NA	NA	NA
AZY33699.1\|1321687_1322326_+	DedA family protein	NA	NA	NA	NA
AZY33700.1\|1322620_1322848_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AZY33701.1\|1322970_1323684_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AZY33702.1\|1323928_1324879_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33703.1\|1324982_1325264_+	hypothetical protein	NA	NA	NA	NA
AZY33704.1\|1325378_1326827_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
AZY33705.1\|1326937_1327888_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_13

1573160 : 1644314

Ectocarpus_siliculosus_virus(10.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY33928.1\|1573160_1574111_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33929.1\|1574132_1575353_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA
AZY33930.1\|1575538_1576951_+	type I glutamate--ammonia ligase	NA	NA	NA	NA
AZY33931.1\|1577014_1578082_+	PAS domain-containing sensor histidine kinase	Q8QKV7	Ectocarpus_siliculosus_virus	1.1e-05	23.5
AZY33932.1\|1578078_1579569_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA
AZY36076.1\|1579578_1580523_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY33933.1\|1580682_1581381_+	pirin family protein	NA	NA	NA	NA
AZY33934.1\|1581458_1582364_+	pirin family protein	NA	NA	NA	NA
AZY33935.1\|1582383_1583334_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33936.1\|1583432_1584227_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.3e-16	29.4
AZY33937.1\|1584231_1585902_-	iron ABC transporter permease	NA	NA	NA	NA
AZY33938.1\|1586025_1587075_-	iron ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY33939.1\|1587396_1588173_+	ferredoxin--NADP reductase	NA	NA	NA	NA
AZY33940.1\|1588237_1589140_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY33941.1\|1590433_1591237_+	2,5-didehydrogluconate reductase DkgB	A0A2H4PQR8	Staphylococcus_phage	2.0e-33	32.4
AZY33942.1\|1593930_1594317_+	reactive intermediate/imine deaminase	NA	NA	NA	NA
AZY33943.1\|1594332_1596423_+	DNA helicase RecG	NA	NA	NA	NA
AZY33944.1\|1596474_1597428_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	7.2e-14	26.5
AZY36077.1\|1597442_1598330_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY33945.1\|1598467_1599994_+	methylmalonate-semialdehyde dehydrogenase (CoA acylating)	NA	NA	NA	NA
AZY36078.1\|1600092_1600593_+	DNA starvation/stationary phase protection protein	W5S6G8	Pithovirus	6.4e-14	35.5
AZY33946.1\|1600916_1602872_-	capsular biosynthesis protein	NA	NA	NA	NA
AZY33947.1\|1603039_1605124_-	hypothetical protein	NA	NA	NA	NA
AZY33948.1\|1605150_1605936_-	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	1.1e-12	32.0
AZY33949.1\|1606791_1607562_+	polyhydroxyalkanoate biosynthesis repressor PhaR	NA	NA	NA	NA
AZY33950.1\|1607561_1608302_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
AZY33951.1\|1608343_1609513_+	capsule biosynthesis protein	NA	NA	NA	NA
AZY33952.1\|1609544_1611629_+	Vi polysaccharide biosynthesis protein TviE	NA	NA	NA	NA
AZY33953.1\|1611625_1612516_+	capsular biosynthesis protein	NA	NA	NA	NA
AZY33954.1\|1612512_1613610_+	capsular polysaccharide export protein	NA	NA	NA	NA
AZY33955.1\|1613632_1614922_+	nucleotide sugar dehydrogenase	NA	NA	NA	NA
AZY33956.1\|1614933_1615959_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	A0A2K9L4U8	Tupanvirus	4.7e-72	44.2
AZY33957.1\|1615955_1618013_+	capsular polysaccharide export protein	NA	NA	NA	NA
AZY33958.1\|1618026_1619202_+	capsule biosynthesis protein CapA	NA	NA	NA	NA
AZY33959.1\|1619283_1620234_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33960.1\|1620292_1621066_+	oxidoreductase	NA	NA	NA	NA
AZY33961.1\|1621058_1622615_+	LTA synthase family protein	NA	NA	NA	NA
AZY33962.1\|1622611_1623562_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33963.1\|1624888_1625491_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY33964.1\|1625730_1626432_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
AZY33965.1\|1626425_1627208_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	2.0e-09	25.8
AZY33966.1\|1627392_1628343_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33967.1\|1628441_1629179_-	hypothetical protein	A0A0S4KZH7	Pseudomonas_phage	4.1e-41	46.6
AZY33968.1\|1629368_1630127_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZY33969.1\|1630173_1631163_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY33970.1\|1631340_1632309_-	transporter	NA	NA	NA	NA
AZY33971.1\|1633848_1634817_+	AAA family ATPase	NA	NA	NA	NA
AZY33972.1\|1634825_1635767_+	DUF58 domain-containing protein	NA	NA	NA	NA
AZY33973.1\|1636240_1637251_+	hypothetical protein	NA	NA	NA	NA
AZY36079.1\|1637241_1638756_+	VWA domain-containing protein	NA	NA	NA	NA
AZY33974.1\|1638752_1640099_+	hypothetical protein	NA	NA	NA	NA
AZY36080.1\|1640101_1641136_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA
AZY33975.1\|1641185_1642811_+	arylsulfatase	A0A2P0VMN7	Tetraselmis_virus	2.0e-149	52.2
AZY33976.1\|1643363_1644314_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_14

1665105 : 1726453

uncultured_Caudovirales_phage(12.5%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY33991.1\|1665105_1666056_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY36085.1\|1666349_1667072_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	1.3e-87	68.2
AZY33992.1\|1667510_1668698_-	MFS transporter	NA	NA	NA	NA
AZY33993.1\|1668701_1669082_-	ArsR family transcriptional regulator	NA	NA	NA	NA
AZY33994.1\|1670801_1671773_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY33995.1\|1671786_1672500_+	NAD-dependent oxidoreductase	NA	NA	NA	NA
AZY33996.1\|1672504_1673422_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY33997.1\|1673528_1673825_+	hypothetical protein	NA	NA	NA	NA
AZY33998.1\|1673923_1674874_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY33999.1\|1676032_1678966_+	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA
AZY34000.1\|1678965_1679310_+	Na+/H+ antiporter subunit C	NA	NA	NA	NA
AZY34001.1\|1679306_1680935_+	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA
AZY34002.1\|1680931_1681411_+	Na+/H+ antiporter subunit E	NA	NA	NA	NA
AZY34003.1\|1681407_1681692_+	K+/H+ antiporter subunit F	NA	NA	NA	NA
AZY34004.1\|1681688_1682015_+	cation:proton antiporter	NA	NA	NA	NA
AZY34005.1\|1682170_1683121_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34006.1\|1683164_1683707_+	hypothetical protein	NA	NA	NA	NA
AZY34007.1\|1683804_1684653_+	hydrolase	NA	NA	NA	NA
AZY34008.1\|1684645_1685152_+\|tRNA	tRNA adenosine(34) deaminase TadA	S4VYT2	Pandoravirus	3.4e-07	38.4
AZY34009.1\|1685148_1686150_+	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA
AZY34010.1\|1686162_1686957_-	enoyl-CoA hydratase	NA	NA	NA	NA
AZY34011.1\|1687005_1688907_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AZY34012.1\|1688903_1689527_-	hypothetical protein	NA	NA	NA	NA
AZY34013.1\|1689653_1690778_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY34014.1\|1691095_1692763_+	ABC-F family ATPase	A0A1V0SKJ1	Klosneuvirus	1.6e-53	28.9
AZY34015.1\|1692918_1693695_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-30	34.2
AZY34016.1\|1693779_1694778_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY34017.1\|1694774_1695548_+	ABC transporter permease	NA	NA	NA	NA
AZY34018.1\|1696532_1697483_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34019.1\|1697506_1697971_-	GatB/YqeY domain-containing protein	A0A0K2FLI9	Brevibacillus_phage	3.9e-05	32.4
AZY34020.1\|1698117_1699326_+	flavohemoprotein	NA	NA	NA	NA
AZY34021.1\|1699336_1699807_+	DNA-binding protein	NA	NA	NA	NA
AZY34022.1\|1699925_1701215_+	D-amino acid dehydrogenase	NA	NA	NA	NA
AZY34023.1\|1703955_1704906_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34024.1\|1705004_1706021_-	folate-binding protein	NA	NA	NA	NA
AZY34025.1\|1706187_1707234_+	endolytic transglycosylase MltG	NA	NA	NA	NA
AZY34026.1\|1707230_1707857_+	thymidylate kinase	A0A1L2BX49	Bacteriophage	1.6e-22	35.1
AZY34027.1\|1707853_1708906_+	DNA polymerase III subunit delta'	NA	NA	NA	NA
AZY34028.1\|1708955_1709726_+	TatD family deoxyribonuclease	NA	NA	NA	NA
AZY34029.1\|1709776_1710613_+	hypothetical protein	NA	NA	NA	NA
AZY34030.1\|1710808_1711549_+	IclR family transcriptional regulator	NA	NA	NA	NA
AZY34031.1\|1711623_1712367_+	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY34032.1\|1713028_1713802_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.1e-31	37.7
AZY34033.1\|1714939_1716229_+	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
AZY34034.1\|1717839_1719087_-	Zn-dependent hydrolase	NA	NA	NA	NA
AZY34035.1\|1719096_1720806_-	thiamine pyrophosphate-binding protein	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	5.9e-35	27.3
AZY34036.1\|1720802_1721741_-	CoA ester lyase	NA	NA	NA	NA
AZY34037.1\|1721737_1723021_-	TRAP transporter large permease	NA	NA	NA	NA
AZY34038.1\|1723024_1723507_-	TRAP transporter small permease	NA	NA	NA	NA
AZY34039.1\|1723507_1724494_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY34040.1\|1724666_1725386_-	FadR family transcriptional regulator	NA	NA	NA	NA
AZY34041.1\|1725502_1726453_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_15

1832641 : 1891911

Klosneuvirus(40.0%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY34118.1\|1832641_1833592_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34119.1\|1833716_1834526_-	enoyl-CoA hydratase	NA	NA	NA	NA
AZY34120.1\|1834726_1835677_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34121.1\|1836950_1838168_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA
AZY34122.1\|1839224_1840127_+	GntR family transcriptional regulator	NA	NA	NA	NA
AZY34123.1\|1840203_1841076_+	MOSC domain-containing protein	NA	NA	NA	NA
AZY34124.1\|1841206_1841575_+	aspartate 1-decarboxylase	NA	NA	NA	NA
AZY34125.1\|1841632_1842679_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
AZY34126.1\|1842874_1844131_+	D-amino acid dehydrogenase	NA	NA	NA	NA
AZY34127.1\|1844135_1845473_+	glycerol-3-phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY34128.1\|1845622_1846579_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY34129.1\|1848051_1848402_+	hypothetical protein	NA	NA	NA	NA
AZY34130.1\|1848449_1850024_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY34131.1\|1850076_1851021_+	ABC transporter permease	NA	NA	NA	NA
AZY34132.1\|1851038_1851869_+	ABC transporter permease	NA	NA	NA	NA
AZY34133.1\|1851861_1853496_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.2e-18	32.7
AZY34134.1\|1853492_1854848_+	amidase	NA	NA	NA	NA
AZY34135.1\|1855754_1857332_+	lipoprotein	NA	NA	NA	NA
AZY34136.1\|1857335_1858610_+	hypothetical protein	NA	NA	NA	NA
AZY36091.1\|1858707_1859082_+	hypothetical protein	NA	NA	NA	NA
AZY34137.1\|1860797_1861931_+	general secretion pathway protein	NA	NA	NA	NA
AZY34138.1\|1861968_1862574_+	prepilin-type cleavage/methylation domain-containing protein	NA	NA	NA	NA
AZY34139.1\|1862570_1863389_+	hypothetical protein	NA	NA	NA	NA
AZY34140.1\|1863460_1866085_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.7e-81	39.4
AZY34141.1\|1866071_1866326_+	sulfurtransferase TusA family protein	NA	NA	NA	NA
AZY34142.1\|1866392_1866974_-	hypothetical protein	NA	NA	NA	NA
AZY34143.1\|1867277_1867538_+	30S ribosomal protein S16	NA	NA	NA	NA
AZY34144.1\|1867703_1868327_+	ribosome maturation factor RimM	NA	NA	NA	NA
AZY34145.1\|1868326_1869100_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AZY34146.1\|1869096_1870305_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
AZY34147.1\|1870330_1870804_-	RidA family protein	NA	NA	NA	NA
AZY34148.1\|1870877_1871828_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34149.1\|1871926_1872877_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34150.1\|1872975_1874325_-	two-component sensor histidine kinase	NA	NA	NA	NA
AZY34151.1\|1875090_1875846_+	MipA/OmpV family protein	NA	NA	NA	NA
AZY34152.1\|1875938_1878821_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	3.7e-138	37.1
AZY34153.1\|1879143_1879569_+	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	2.1e-21	43.2
AZY34154.1\|1879596_1880745_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA
AZY34155.1\|1880741_1881248_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AZY34156.1\|1881254_1882550_+	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)	NA	NA	NA	NA
AZY34157.1\|1882590_1883895_+\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
AZY34158.1\|1883896_1884535_+	hypothetical protein	NA	NA	NA	NA
AZY34159.1\|1884537_1885698_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA
AZY34160.1\|1885724_1887080_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA
AZY34161.1\|1887083_1888154_+	histidinol-phosphate aminotransferase 1	A0A1X6WGT4	Pacmanvirus	2.5e-15	25.7
AZY34162.1\|1888292_1888529_+	RNA-binding protein Hfq	NA	NA	NA	NA
AZY34163.1\|1888616_1889723_+	GTPase HflX	NA	NA	NA	NA
AZY34164.1\|1889688_1890993_+\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
AZY34165.1\|1891011_1891911_+\|protease	protease modulator HflC	NA	NA	NA	NA

DBSCAN-SWA_16

1902151 : 1945425

Staphylococcus_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY34173.1\|1902151_1903102_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34174.1\|1903200_1904151_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34175.1\|1904137_1904338_-	hypothetical protein	NA	NA	NA	NA
AZY34176.1\|1904350_1905436_+	AI-2E family transporter	NA	NA	NA	NA
AZY34177.1\|1905451_1906213_-	ABC transporter permease	NA	NA	NA	NA
AZY34178.1\|1906209_1907133_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.6e-23	33.6
AZY34179.1\|1907231_1907756_-	N-acetyltransferase	NA	NA	NA	NA
AZY34180.1\|1907764_1908508_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
AZY34181.1\|1908603_1908843_-	hypothetical protein	NA	NA	NA	NA
AZY34182.1\|1908856_1909009_-	lipoprotein	NA	NA	NA	NA
AZY34183.1\|1909094_1910585_-	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA
AZY34184.1\|1910676_1911615_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA
AZY34185.1\|1911611_1911788_-	CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone	NA	NA	NA	NA
AZY34186.1\|1911790_1912453_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA
AZY36093.1\|1914074_1914218_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA
AZY34187.1\|1914214_1915189_-	hypothetical protein	NA	NA	NA	NA
AZY34188.1\|1915355_1916306_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34189.1\|1916302_1917577_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	9.6e-14	28.9
AZY34190.1\|1917674_1918874_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA
AZY34191.1\|1918870_1919524_+	alpha/beta hydrolase	NA	NA	NA	NA
AZY34192.1\|1919520_1920957_+	dethiobiotin synthase	NA	NA	NA	NA
AZY34193.1\|1920944_1921304_+	CidA/LrgA family protein	NA	NA	NA	NA
AZY34194.1\|1922276_1923227_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34195.1\|1923223_1925089_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
AZY36094.1\|1925346_1926867_+	aldehyde dehydrogenase	NA	NA	NA	NA
AZY34196.1\|1926954_1927605_-	flavodoxin family protein	NA	NA	NA	NA
AZY34197.1\|1928553_1929849_+	DUF445 domain-containing protein	NA	NA	NA	NA
AZY34198.1\|1929870_1930755_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY36095.1\|1930853_1931729_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
AZY34199.1\|1931718_1932075_-	DUF1428 domain-containing protein	NA	NA	NA	NA
AZY34200.1\|1932148_1933180_+	AraC family transcriptional regulator	NA	NA	NA	NA
AZY34201.1\|1933309_1933489_-	DUF3008 domain-containing protein	NA	NA	NA	NA
AZY34202.1\|1933586_1934111_+	DUF302 domain-containing protein	NA	NA	NA	NA
AZY34203.1\|1934121_1934958_-	alpha/beta hydrolase	NA	NA	NA	NA
AZY34204.1\|1935070_1935442_+	transcriptional regulator	NA	NA	NA	NA
AZY34205.1\|1935438_1935990_+	ATPase	NA	NA	NA	NA
AZY34206.1\|1936005_1937697_-	sodium-independent anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	5.0e-42	27.3
AZY34207.1\|1937745_1938426_-	GntR family transcriptional regulator	NA	NA	NA	NA
AZY34208.1\|1938673_1939138_-	hypothetical protein	NA	NA	NA	NA
AZY34209.1\|1939307_1940237_+	ZIP family metal transporter	NA	NA	NA	NA
AZY34210.1\|1940249_1940897_-	hypothetical protein	NA	NA	NA	NA
AZY34211.1\|1940970_1942788_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.3e-37	27.4
AZY34212.1\|1942871_1943822_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34213.1\|1944474_1945425_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_17

1975198 : 2039567

Vibrio_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY34241.1\|1975198_1976149_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34242.1\|1976135_1976327_-	hypothetical protein	NA	NA	NA	NA
AZY34243.1\|1976370_1977321_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34244.1\|1977419_1978385_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY34245.1\|1978522_1979422_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY34246.1\|1982016_1983504_+	hypothetical protein	NA	NA	NA	NA
AZY34247.1\|1983514_1984711_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA
AZY34248.1\|1984783_1986103_+	phenylacetate--CoA ligase family protein	NA	NA	NA	NA
AZY34249.1\|1986099_1986975_+	alpha/beta hydrolase	NA	NA	NA	NA
AZY34250.1\|1987005_1988175_-	CoA transferase	NA	NA	NA	NA
AZY34251.1\|1988171_1988486_-	ferredoxin	NA	NA	NA	NA
AZY34252.1\|1988507_1989230_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZY34253.1\|1989229_1990048_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AZY34254.1\|1990052_1990580_-	ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA
AZY34255.1\|1990585_1991851_-	ring-hydroxylating oxygenase subunit alpha	NA	NA	NA	NA
AZY34256.1\|1992200_1993340_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY34257.1\|1993417_1994290_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY34258.1\|1995160_1996111_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34259.1\|1996070_1996706_-	hypothetical protein	NA	NA	NA	NA
AZY34260.1\|1997065_1998388_-	isocitrate lyase	NA	NA	NA	NA
AZY34261.1\|1998616_1999528_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	A0A2I7SAX1	Vibrio_phage	5.9e-42	37.6
AZY34262.1\|2000952_2001525_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
AZY34263.1\|2001564_2003394_-	UvrABC system protein C	NA	NA	NA	NA
AZY34264.1\|2003356_2004415_-	beta-hexosaminidase	NA	NA	NA	NA
AZY34265.1\|2004452_2004914_-	holo-ACP synthase	NA	NA	NA	NA
AZY34266.1\|2004998_2005745_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
AZY34267.1\|2007235_2010466_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AZY34268.1\|2010532_2011864_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AZY34269.1\|2012116_2012491_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AZY34270.1\|2012593_2013772_-	hypothetical protein	NA	NA	NA	NA
AZY34271.1\|2013782_2014373_-	DUF4136 domain-containing protein	NA	NA	NA	NA
AZY36099.1\|2014483_2015290_+	molybdenum-dependent transcriptional regulator	NA	NA	NA	NA
AZY34272.1\|2015315_2016110_-	ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	5.1e-05	25.7
AZY34273.1\|2017110_2018085_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY34274.1\|2018243_2018756_-	superoxide dismutase [Cu-Zn] SodC1	Q9MC02	Salmonella_phage	1.8e-43	52.3
AZY34275.1\|2018912_2019884_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY34276.1\|2021628_2022435_-	enoyl-CoA hydratase	NA	NA	NA	NA
AZY36100.1\|2022431_2023568_-	malonyl-CoA decarboxylase	NA	NA	NA	NA
AZY34277.1\|2023683_2024448_-	GntR family transcriptional regulator	NA	NA	NA	NA
AZY34278.1\|2024561_2025332_-	spermidine synthase	NA	NA	NA	NA
AZY34279.1\|2025416_2026628_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA
AZY34280.1\|2026676_2027051_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA
AZY34281.1\|2027151_2028414_-	glycine betaine/L-proline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.8e-28	36.6
AZY34282.1\|2028410_2029268_-	ABC transporter permease	NA	NA	NA	NA
AZY34283.1\|2029440_2030442_-	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY34284.1\|2030893_2031844_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34285.1\|2033359_2034559_+	Bcr/CflA family drug resistance efflux transporter	NA	NA	NA	NA
AZY34286.1\|2034927_2035164_+	50S ribosomal protein L28	NA	NA	NA	NA
AZY34287.1\|2035227_2035395_+	50S ribosomal protein L33	NA	NA	NA	NA
AZY34288.1\|2035508_2037404_-	STAS domain-containing protein	A0A2H4J153	uncultured_Caudovirales_phage	2.3e-19	27.5
AZY34289.1\|2037567_2038518_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34290.1\|2038616_2039567_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_18

2132722 : 2196812

Lake_Baikal_phage(18.18%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY34364.1\|2132722_2133991_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34365.1\|2134561_2134774_-	hypothetical protein	NA	NA	NA	NA
AZY34366.1\|2134791_2135523_-	hypothetical protein	NA	NA	NA	NA
AZY34367.1\|2135557_2136199_-	CoA transferase subunit B	NA	NA	NA	NA
AZY34368.1\|2136191_2136908_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA
AZY34369.1\|2139072_2139849_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AZY34370.1\|2139870_2141028_-	thiolase	NA	NA	NA	NA
AZY34371.1\|2141024_2141456_-	hypothetical protein	NA	NA	NA	NA
AZY34372.1\|2141452_2142256_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AZY34373.1\|2142269_2142725_-	MaoC family dehydratase	NA	NA	NA	NA
AZY34374.1\|2142737_2143709_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY34375.1\|2143774_2144998_-	CoA transferase	NA	NA	NA	NA
AZY34376.1\|2145225_2146176_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY34377.1\|2146299_2148753_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.5e-220	52.0
AZY34378.1\|2148941_2150246_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.2e-129	53.8
AZY34379.1\|2150350_2151004_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	6.8e-56	57.5
AZY34380.1\|2151006_2152317_-	trigger factor	NA	NA	NA	NA
AZY34381.1\|2152495_2153074_+	TIGR00645 family protein	K4K6D8	Caulobacter_phage	1.0e-23	33.7
AZY34382.1\|2153185_2153386_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	7.4e-14	64.4
AZY34383.1\|2153731_2154298_-	DUF924 domain-containing protein	NA	NA	NA	NA
AZY34384.1\|2154381_2154585_-	cold-shock protein CspA	A0A2H4N7Y6	Lake_Baikal_phage	1.6e-16	62.1
AZY34385.1\|2154891_2155212_-	hypothetical protein	NA	NA	NA	NA
AZY34386.1\|2155253_2155535_-	hypothetical protein	NA	NA	NA	NA
AZY34387.1\|2155609_2156866_-	autotransporter Phg	NA	NA	NA	NA
AZY34388.1\|2157248_2157578_+	DUF4148 domain-containing protein	NA	NA	NA	NA
AZY34389.1\|2159148_2159970_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
AZY34390.1\|2159969_2161109_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA
AZY34391.1\|2161115_2162012_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
AZY34392.1\|2162008_2163934_+	ABC transporter ATP-binding protein	A0A2K9L0W2	Tupanvirus	1.1e-66	31.8
AZY34393.1\|2164293_2166906_+	TonB-dependent receptor	NA	NA	NA	NA
AZY34394.1\|2166958_2169259_-	DNA helicase II	A7KV33	Bacillus_phage	9.9e-110	35.9
AZY34395.1\|2169255_2170464_-	acyl-CoA desaturase	NA	NA	NA	NA
AZY34396.1\|2170725_2171100_+	hypothetical protein	NA	NA	NA	NA
AZY34397.1\|2171096_2172047_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34398.1\|2172145_2174140_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.4e-21	33.3
AZY34399.1\|2174199_2175165_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA
AZY34400.1\|2175154_2178016_+\|tRNA	isoleucine--tRNA ligase	A0A1V0SJ93	Klosneuvirus	1.0e-71	25.5
AZY34401.1\|2178018_2178525_+	lipoprotein signal peptidase	NA	NA	NA	NA
AZY34402.1\|2178629_2179838_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	3.8e-36	30.0
AZY34403.1\|2179839_2180778_-	hypothetical protein	NA	NA	NA	NA
AZY34404.1\|2180939_2181413_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AZY34405.1\|2181409_2182360_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34406.1\|2182346_2182526_-	hypothetical protein	NA	NA	NA	NA
AZY34407.1\|2182470_2182911_-	DUF937 domain-containing protein	NA	NA	NA	NA
AZY34408.1\|2183039_2184269_-	lytic murein transglycosylase	NA	NA	NA	NA
AZY34409.1\|2184307_2185129_-	DUF455 domain-containing protein	NA	NA	NA	NA
AZY34410.1\|2185182_2186334_+	N-acetyltransferase	NA	NA	NA	NA
AZY34411.1\|2186425_2186914_-	DUF1854 domain-containing protein	NA	NA	NA	NA
AZY34412.1\|2189440_2192014_+	cyanophycin synthetase	NA	NA	NA	NA
AZY34413.1\|2192084_2194658_+	cyanophycin synthetase	NA	NA	NA	NA
AZY34414.1\|2194923_2195124_+	CsbD family protein	NA	NA	NA	NA
AZY34415.1\|2195155_2195317_+	DUF1328 domain-containing protein	NA	NA	NA	NA
AZY34416.1\|2195374_2195713_+	phospholipid-binding protein	NA	NA	NA	NA
AZY34417.1\|2195861_2196812_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_19

2476007 : 2534251

Planktothrix_phage(28.57%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY34651.1\|2476007_2476958_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34652.1\|2477437_2478094_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
AZY34653.1\|2478108_2479776_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AZY34654.1\|2479778_2480408_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY34655.1\|2480619_2481714_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY34656.1\|2481858_2482671_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
AZY34657.1\|2482674_2484378_-	peptidoglycan-binding protein LysM	NA	NA	NA	NA
AZY34658.1\|2484428_2485559_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
AZY34659.1\|2485745_2486822_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA
AZY36118.1\|2486903_2487554_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
AZY34660.1\|2487568_2489002_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA
AZY34661.1\|2489255_2490074_-	tungsten ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY34662.1\|2490070_2490775_-	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-13	30.0
AZY34663.1\|2491674_2492790_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY34664.1\|2492823_2493198_-	hypothetical protein	NA	NA	NA	NA
AZY34665.1\|2493220_2494378_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA
AZY34666.1\|2494390_2494624_-	lipoprotein	NA	NA	NA	NA
AZY34667.1\|2495258_2498228_-	formate dehydrogenase	NA	NA	NA	NA
AZY34668.1\|2498242_2498452_-	formate dehydrogenase	NA	NA	NA	NA
AZY34669.1\|2498603_2499233_-	hypothetical protein	NA	NA	NA	NA
AZY34670.1\|2499229_2501347_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
AZY34671.1\|2501343_2502024_-	DUF3306 domain-containing protein	NA	NA	NA	NA
AZY34672.1\|2502020_2502581_-	DUF3305 domain-containing protein	NA	NA	NA	NA
AZY34673.1\|2502587_2503685_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
AZY34674.1\|2503822_2504431_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA
AZY34675.1\|2504427_2505720_+	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA
AZY34676.1\|2505733_2506276_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA
AZY34677.1\|2506285_2507122_-	M48 family peptidase	NA	NA	NA	NA
AZY34678.1\|2507155_2508217_-	chorismate synthase	A0A291AU41	Pandoravirus	2.9e-80	42.8
AZY34679.1\|2508258_2509311_-	GGDEF domain-containing protein	NA	NA	NA	NA
AZY34680.1\|2509326_2509629_-	hypothetical protein	NA	NA	NA	NA
AZY34681.1\|2509770_2510721_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34682.1\|2510899_2512594_+	iron ABC transporter permease	NA	NA	NA	NA
AZY34683.1\|2512590_2513676_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.4e-27	37.7
AZY34684.1\|2513723_2514623_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY34685.1\|2514633_2515278_+	histidine phosphatase family protein	NA	NA	NA	NA
AZY34686.1\|2516299_2519542_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
AZY34687.1\|2519552_2520650_-	carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	5.3e-53	35.2
AZY34688.1\|2520912_2521896_+	transaldolase	H6WFR1	Cyanophage	5.9e-11	29.2
AZY34689.1\|2521994_2522945_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34690.1\|2523043_2523994_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34691.1\|2524003_2524693_-	VIT family protein	NA	NA	NA	NA
AZY34692.1\|2524752_2525190_-	PaaI family thioesterase	NA	NA	NA	NA
AZY34693.1\|2525235_2526129_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA
AZY34694.1\|2526176_2527349_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AZY34695.1\|2527345_2528500_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
AZY34696.1\|2528696_2529047_-	RnfH family protein	NA	NA	NA	NA
AZY34697.1\|2529036_2529471_-	ubiquinone-binding protein	NA	NA	NA	NA
AZY34698.1\|2529487_2530438_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34699.1\|2530585_2531053_+	SsrA-binding protein	W5RAM5	Staphylococcus_phage	6.2e-27	45.1
AZY34700.1\|2531033_2532191_-	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	2.3e-14	36.2
AZY34701.1\|2532256_2533183_-	paraslipin	NA	NA	NA	NA
AZY34702.1\|2533300_2534251_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_20

2576529 : 2643029

uncultured_Caudovirales_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY34741.1\|2576529_2577480_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34742.1\|2577849_2578422_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA
AZY34743.1\|2578424_2579435_+	flagellar motor switch protein FliM	NA	NA	NA	NA
AZY34744.1\|2579427_2579928_+	flagellar motor switch protein FliN	NA	NA	NA	NA
AZY34745.1\|2579938_2580280_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA
AZY34746.1\|2580291_2581083_+	flagellar biosynthetic protein FliP	NA	NA	NA	NA
AZY34747.1\|2581099_2581369_+	flagellar biosynthetic protein FliQ	NA	NA	NA	NA
AZY34748.1\|2581391_2582180_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA
AZY36122.1\|2582226_2583243_-\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AZY34749.1\|2583459_2584902_-	PAS domain S-box protein	A0A1B0V854	Salmonella_phage	1.0e-35	41.8
AZY34750.1\|2585080_2586700_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.5e-08	45.3
AZY34751.1\|2586820_2588641_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	6.4e-11	52.6
AZY34752.1\|2588719_2590252_-	flagellar hook-associated protein 3	NA	NA	NA	NA
AZY34753.1\|2590285_2591932_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA
AZY34754.1\|2592001_2593024_-	flagellar assembly peptidoglycan hydrolase FlgJ	A0A088F6W1	Sulfitobacter_phage	1.9e-12	31.4
AZY34755.1\|2593041_2594175_-	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA
AZY34756.1\|2594177_2594867_-	flagellar L-ring protein	NA	NA	NA	NA
AZY34757.1\|2594866_2595652_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA
AZY34758.1\|2595695_2596460_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA
AZY34759.1\|2596498_2597920_-	flagellar hook protein FlgE	NA	NA	NA	NA
AZY34760.1\|2597985_2598690_-	flagellar basal body rod modification protein	NA	NA	NA	NA
AZY34761.1\|2598737_2599157_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA
AZY34762.1\|2599169_2599577_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA
AZY36123.1\|2599760_2600471_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA
AZY34763.1\|2600597_2600888_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA
AZY34764.1\|2600905_2601388_+	flagellar protein FlgN	NA	NA	NA	NA
AZY34765.1\|2605893_2607048_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA
AZY36124.1\|2607353_2608370_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY34766.1\|2608616_2609405_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY34767.1\|2609471_2610152_+	amino acid ABC transporter permease	NA	NA	NA	NA
AZY34768.1\|2610148_2610919_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.8e-30	39.1
AZY34769.1\|2611017_2611968_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34770.1\|2612023_2612941_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA
AZY34771.1\|2612951_2614130_-	mandelate racemase	NA	NA	NA	NA
AZY34772.1\|2614149_2615145_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY34773.1\|2616733_2617342_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
AZY34774.1\|2617329_2618370_+	LacI family transcriptional regulator	NA	NA	NA	NA
AZY34775.1\|2618387_2619350_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY34776.1\|2619346_2620540_-	CoA transferase	NA	NA	NA	NA
AZY34777.1\|2620536_2621334_-	citryl-CoA lyase	NA	NA	NA	NA
AZY34778.1\|2621359_2622346_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY34779.1\|2622364_2624404_-	acetyl-CoA synthetase	NA	NA	NA	NA
AZY36125.1\|2624605_2625286_+	GntR family transcriptional regulator	NA	NA	NA	NA
AZY34780.1\|2625299_2626211_-	CoA ester lyase	NA	NA	NA	NA
AZY34781.1\|2626207_2626786_-	NADPH-dependent oxidoreductase	NA	NA	NA	NA
AZY34782.1\|2626924_2627830_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY34783.1\|2627837_2631257_+	nuclease	NA	NA	NA	NA
AZY34784.1\|2631244_2633845_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA
AZY34785.1\|2634800_2635433_-	PadR family transcriptional regulator	NA	NA	NA	NA
AZY34786.1\|2635826_2636585_+	hypothetical protein	NA	NA	NA	NA
AZY34787.1\|2636581_2637784_+	cardiolipin synthase ClsB	NA	NA	NA	NA
AZY34788.1\|2637971_2638922_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34789.1\|2639829_2640975_+	DUF3182 domain-containing protein	NA	NA	NA	NA
AZY36126.1\|2640994_2641717_+	alpha/beta hydrolase	NA	NA	NA	NA
AZY34790.1\|2641833_2642013_+	hypothetical protein	NA	NA	NA	NA
AZY34791.1\|2642078_2643029_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_21

2671144 : 2709605

Planktothrix_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY34806.1\|2671144_2672095_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34807.1\|2672193_2673144_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34808.1\|2673236_2673776_+	peroxiredoxin	NA	NA	NA	NA
AZY34809.1\|2673882_2674227_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	3.0e-31	58.4
AZY34810.1\|2674284_2675733_-	CoA transferase	NA	NA	NA	NA
AZY34811.1\|2676022_2676973_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34812.1\|2676969_2677305_-	tetratricopeptide repeat protein	NA	NA	NA	NA
AZY34813.1\|2678932_2680111_+	DUF1501 domain-containing protein	NA	NA	NA	NA
AZY34814.1\|2680193_2680694_+	glutathione peroxidase	Q6VZR0	Canarypox_virus	4.7e-25	38.4
AZY34815.1\|2680719_2681505_+	thiol:disulfide oxidoreductase	NA	NA	NA	NA
AZY34816.1\|2681516_2681981_+	N-acetyltransferase	NA	NA	NA	NA
AZY34817.1\|2681977_2682271_+	biotin--protein ligase	NA	NA	NA	NA
AZY34818.1\|2682267_2683044_+	lipoate--protein ligase family protein	NA	NA	NA	NA
AZY34819.1\|2683072_2683900_+	DUF3298 domain-containing protein	NA	NA	NA	NA
AZY34820.1\|2684025_2684496_+	hypothetical protein	NA	NA	NA	NA
AZY34821.1\|2684622_2685516_+	phosphatidylserine decarboxylase proenzyme	NA	NA	NA	NA
AZY34822.1\|2685563_2686745_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
AZY34823.1\|2686757_2687573_-	iron ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY34824.1\|2687706_2688234_-	RES domain-containing protein	NA	NA	NA	NA
AZY36129.1\|2688230_2688728_-	DUF2384 domain-containing protein	NA	NA	NA	NA
AZY34825.1\|2688875_2689253_+	DUF423 domain-containing protein	NA	NA	NA	NA
AZY34826.1\|2689474_2690425_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY36130.1\|2690523_2691135_-	alpha/beta hydrolase	NA	NA	NA	NA
AZY34827.1\|2691369_2692497_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY34828.1\|2692607_2693696_-	sn-glycerol-3-phosphate import ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	2.2e-19	31.2
AZY34829.1\|2693748_2694600_-	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA
AZY34830.1\|2694619_2695501_-	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA
AZY36131.1\|2695677_2696991_-	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA
AZY34831.1\|2697201_2698035_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA
AZY34832.1\|2698031_2698613_+	hypothetical protein	A0A2I7SAW6	Vibrio_phage	9.4e-17	37.3
AZY34833.1\|2698966_2699917_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34834.1\|2699932_2701048_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY34835.1\|2701150_2702077_+	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA
AZY34836.1\|2702076_2703315_+	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA
AZY34837.1\|2703311_2704079_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-14	26.4
AZY34838.1\|2704079_2704781_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-17	30.4
AZY36132.1\|2704862_2705309_-	glutamate racemase	NA	NA	NA	NA
AZY34839.1\|2706198_2706837_+	glutathione S-transferase	NA	NA	NA	NA
AZY34840.1\|2707605_2708556_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34841.1\|2708654_2709605_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_22

2808732 : 2863249

Diachasmimorpha_longicaudata_entomopoxvirus(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY34925.1\|2808732_2809683_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34926.1\|2809669_2809864_-	hypothetical protein	NA	NA	NA	NA
AZY34927.1\|2810011_2810617_+	fimbrial protein FimX	NA	NA	NA	NA
AZY34928.1\|2810670_2811984_-	phenylacetate--CoA ligase	NA	NA	NA	NA
AZY34929.1\|2812058_2812529_-	phenylacetic acid degradation protein PaaD	NA	NA	NA	NA
AZY34930.1\|2812528_2813317_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA
AZY34931.1\|2813327_2814980_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA
AZY34932.1\|2815067_2816018_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY36138.1\|2817179_2817686_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA
AZY34933.1\|2817682_2818447_-	phenylacetate-CoA oxygenase subunit PaaI	NA	NA	NA	NA
AZY34934.1\|2818462_2818747_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA
AZY34935.1\|2818811_2819801_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA
AZY34936.1\|2819972_2820902_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA
AZY34937.1\|2820873_2821560_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA
AZY34938.1\|2821593_2822139_-	oligoribonuclease	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	2.1e-26	37.7
AZY34939.1\|2822183_2823449_+	peptidase M48	NA	NA	NA	NA
AZY34940.1\|2823445_2824348_+	ribosome biogenesis GTPase	NA	NA	NA	NA
AZY34941.1\|2825529_2826474_-	ABC transporter permease	NA	NA	NA	NA
AZY34942.1\|2826568_2828086_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY34943.1\|2828127_2829756_-	gamma-glutamyltransferase	NA	NA	NA	NA
AZY34944.1\|2829863_2830745_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY34945.1\|2833857_2834232_+	endonuclease	F4YXR7	Roseobacter_phage	2.1e-25	54.4
AZY34946.1\|2834256_2834595_-	P-II family nitrogen regulator	NA	NA	NA	NA
AZY34947.1\|2834638_2836273_-	NAD+ synthase	A0A2L0UZF5	Agrobacterium_phage	8.3e-87	36.6
AZY34948.1\|2836311_2837658_-	mechanosensitive ion channel protein MscS	NA	NA	NA	NA
AZY36139.1\|2837765_2839187_+	argininosuccinate lyase	NA	NA	NA	NA
AZY34949.1\|2839256_2839841_-	nitroreductase	NA	NA	NA	NA
AZY34950.1\|2839943_2840894_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34951.1\|2841028_2842135_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY34952.1\|2842145_2843243_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA
AZY34953.1\|2843387_2844593_-	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA
AZY34954.1\|2844599_2845121_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA
AZY34955.1\|2845117_2845609_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA
AZY34956.1\|2845605_2845857_-	MoaD/ThiS family protein	NA	NA	NA	NA
AZY34957.1\|2845837_2846323_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA
AZY34958.1\|2846458_2849920_+	hypothetical protein	NA	NA	NA	NA
AZY34959.1\|2849916_2850822_+	dienelactone hydrolase family protein	NA	NA	NA	NA
AZY34960.1\|2850831_2851263_-	lipoprotein	NA	NA	NA	NA
AZY36140.1\|2851509_2852013_+	peroxiredoxin	M1I839	Pelagibacter_phage	1.8e-24	44.1
AZY34961.1\|2852024_2853491_+	MFS transporter	NA	NA	NA	NA
AZY34962.1\|2853565_2854441_-	hypothetical protein	NA	NA	NA	NA
AZY36141.1\|2854437_2855445_-	biotin synthase	NA	NA	NA	NA
AZY34963.1\|2855912_2856218_+	DUF4148 domain-containing protein	NA	NA	NA	NA
AZY34964.1\|2856308_2856899_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY36142.1\|2857089_2858106_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY34965.1\|2858297_2860634_-	copper-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	3.2e-124	42.8
AZY34966.1\|2860716_2861151_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
AZY34967.1\|2861249_2862200_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34968.1\|2862298_2863249_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_23

2871274 : 2928060

uncultured_Mediterranean_phage(28.57%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY34976.1\|2871274_2872225_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34977.1\|2873931_2874237_-	hypothetical protein	NA	NA	NA	NA
AZY34978.1\|2874905_2875244_+	transcriptional regulator	NA	NA	NA	NA
AZY34979.1\|2879797_2880400_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY34980.1\|2880496_2881786_+	MFS transporter	NA	NA	NA	NA
AZY34981.1\|2881843_2882575_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-12	31.0
AZY34982.1\|2882571_2883375_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.9e-14	23.5
AZY34983.1\|2883371_2884460_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
AZY34984.1\|2884456_2885386_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY34985.1\|2885534_2886680_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY34986.1\|2886701_2887652_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY34987.1\|2887982_2891804_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
AZY34988.1\|2891960_2892629_-	lipoprotein	NA	NA	NA	NA
AZY34989.1\|2892633_2894307_-	MCE family protein	NA	NA	NA	NA
AZY34990.1\|2894325_2895645_-	paraquat-inducible membrane protein A	NA	NA	NA	NA
AZY34991.1\|2895649_2898001_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	4.2e-164	41.9
AZY36143.1\|2898020_2900189_-	penicillin-binding protein 1C	NA	NA	NA	NA
AZY34992.1\|2900185_2905375_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA
AZY34993.1\|2905464_2905779_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.2e-10	43.8
AZY34994.1\|2906006_2906252_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-20	76.6
AZY34995.1\|2906346_2906865_+	hypothetical protein	A0A1B1IUW8	uncultured_Mediterranean_phage	5.1e-14	42.2
AZY34996.1\|2906964_2908170_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
AZY34997.1\|2908285_2909683_-	chloride channel protein EriC	NA	NA	NA	NA
AZY34998.1\|2909799_2910378_-	superoxide dismutase [Fe]	NA	NA	NA	NA
AZY34999.1\|2910450_2911842_-	exodeoxyribonuclease VII large subunit	A0A1V0SD82	Indivirus	1.4e-29	32.0
AZY35000.1\|2912009_2912960_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35001.1\|2913240_2913861_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
AZY35002.1\|2913857_2914271_+	biopolymer transporter ExbD	NA	NA	NA	NA
AZY35003.1\|2914267_2915311_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
AZY35004.1\|2915366_2915555_+	hypothetical protein	NA	NA	NA	NA
AZY35005.1\|2915564_2916329_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
AZY35006.1\|2916419_2917076_+	adenylate kinase	NA	NA	NA	NA
AZY35007.1\|2917167_2917926_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
AZY35008.1\|2917951_2919553_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA
AZY35009.1\|2919753_2920758_+	DUF4880 domain-containing protein	NA	NA	NA	NA
AZY35010.1\|2920858_2921122_+	30S ribosomal protein S20	NA	NA	NA	NA
AZY35011.1\|2921239_2922016_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA
AZY35012.1\|2922606_2923557_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35013.1\|2925940_2927053_-	malate dehydrogenase	NA	NA	NA	NA
AZY35014.1\|2927109_2928060_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_24

2958446 : 3002137

Planktothrix_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY35043.1\|2958446_2959397_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35044.1\|2959383_2959629_-	hypothetical protein	NA	NA	NA	NA
AZY35045.1\|2959517_2960414_-	inositol monophosphatase	NA	NA	NA	NA
AZY35046.1\|2962691_2964917_+	glycosyl hydrolase	NA	NA	NA	NA
AZY35047.1\|2965081_2966170_+	methionine import ATP-binding protein MetN	G9BWD6	Planktothrix_phage	8.7e-32	36.4
AZY35048.1\|2966126_2966780_+	ABC transporter permease	NA	NA	NA	NA
AZY35049.1\|2966827_2967625_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY35050.1\|2968156_2969107_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35051.1\|2969187_2970336_+	alcohol dehydrogenase	NA	NA	NA	NA
AZY35052.1\|2970392_2971343_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35053.1\|2971329_2971548_-	hypothetical protein	NA	NA	NA	NA
AZY35054.1\|2971441_2971747_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AZY35055.1\|2971775_2972210_-	DUF126 domain-containing protein	NA	NA	NA	NA
AZY35056.1\|2972211_2973456_-	DUF521 domain-containing protein	NA	NA	NA	NA
AZY35057.1\|2973452_2974163_-	FadR family transcriptional regulator	NA	NA	NA	NA
AZY36145.1\|2974177_2975089_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY35058.1\|2975451_2975856_+	hypothetical protein	NA	NA	NA	NA
AZY35059.1\|2975852_2976311_+	hypothetical protein	NA	NA	NA	NA
AZY35060.1\|2976317_2977226_+	hypothetical protein	NA	NA	NA	NA
AZY36146.1\|2977222_2978089_+	sugar ABC transporter permease	NA	NA	NA	NA
AZY35061.1\|2978075_2978903_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
AZY35062.1\|2978913_2980041_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-23	32.3
AZY35063.1\|2981118_2982357_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35064.1\|2982398_2983661_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY35065.1\|2983667_2984420_+	DNA-binding protein	NA	NA	NA	NA
AZY35066.1\|2984471_2984657_-	hypothetical protein	NA	NA	NA	NA
AZY35067.1\|2984932_2985397_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA
AZY35068.1\|2985428_2986088_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
AZY35069.1\|2986232_2988341_+	AsmA family protein	NA	NA	NA	NA
AZY35070.1\|2988337_2989288_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35071.1\|2989391_2990012_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY36147.1\|2990115_2990856_+	oxidoreductase	NA	NA	NA	NA
AZY35072.1\|2991990_2993115_-	hypothetical protein	NA	NA	NA	NA
AZY35073.1\|2993160_2993529_-	hypothetical protein	NA	NA	NA	NA
AZY35074.1\|2993770_2994721_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35075.1\|2995756_2996299_-	hypothetical protein	NA	NA	NA	NA
AZY35076.1\|2996503_2996698_+	hypothetical protein	NA	NA	NA	NA
AZY35077.1\|2996684_2997635_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35078.1\|2997631_2998597_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY35079.1\|2998666_2999503_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	1.6e-33	33.3
AZY35080.1\|2999979_3001125_+	porin	NA	NA	NA	NA
AZY35081.1\|3001186_3002137_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_25

3235651 : 3270489

Erwinia_phage(20.0%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY35264.1\|3235651_3236602_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35265.1\|3237046_3237358_-	cell division protein ZapA	NA	NA	NA	NA
AZY35266.1\|3237357_3237888_-	hypothetical protein	NA	NA	NA	NA
AZY35267.1\|3238050_3239001_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35268.1\|3239290_3239755_+	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA
AZY35269.1\|3239769_3241275_+	tripartite tricarboxylate transporter permease	NA	NA	NA	NA
AZY35270.1\|3241528_3243136_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA
AZY35271.1\|3243191_3244097_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZY35272.1\|3244537_3245488_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35273.1\|3245586_3246537_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35274.1\|3246618_3247200_-	ATP:cob(I)alamin adenosyltransferase	NA	NA	NA	NA
AZY36165.1\|3247624_3247930_+	RND transporter	NA	NA	NA	NA
AZY35275.1\|3247943_3249278_-	HslU--HslV peptidase ATPase subunit	A0A191ZC11	Erwinia_phage	3.5e-43	29.6
AZY35276.1\|3249299_3249839_-	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA
AZY35277.1\|3249986_3250451_-	RNA polymerase-binding protein DksA	NA	NA	NA	NA
AZY35278.1\|3250593_3251709_-	GTP-binding protein	NA	NA	NA	NA
AZY35279.1\|3251985_3252489_-	transcriptional repressor	NA	NA	NA	NA
AZY35280.1\|3252626_3252827_+	hypothetical protein	NA	NA	NA	NA
AZY35281.1\|3252817_3253540_+	metal ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.1e-11	30.0
AZY35282.1\|3253536_3254433_+	metal ABC transporter permease	NA	NA	NA	NA
AZY35283.1\|3254429_3255365_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY36166.1\|3255370_3255994_+	DUF1007 domain-containing protein	NA	NA	NA	NA
AZY35284.1\|3255984_3256953_+	nickel transporter	NA	NA	NA	NA
AZY35285.1\|3257001_3259143_+	TonB-dependent receptor	NA	NA	NA	NA
AZY35286.1\|3259155_3260136_-	tyrosine recombinase XerC	A0A166YH27	Gordonia_phage	3.3e-14	30.5
AZY35287.1\|3260150_3260843_-	DUF484 domain-containing protein	NA	NA	NA	NA
AZY35288.1\|3260869_3261781_-	diaminopimelate epimerase	NA	NA	NA	NA
AZY35289.1\|3261823_3262714_-	acyltransferase	NA	NA	NA	NA
AZY35290.1\|3262710_3263565_-	lipid A biosynthesis lauroyl acyltransferase	NA	NA	NA	NA
AZY35291.1\|3263713_3265012_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.6e-125	60.9
AZY35292.1\|3265122_3265374_+	DUF1289 domain-containing protein	NA	NA	NA	NA
AZY35293.1\|3265453_3266494_+	glycosyltransferase family 1 protein	NA	NA	NA	NA
AZY35294.1\|3266773_3268192_+	adenosylhomocysteinase	S4VPF6	Pandoravirus	8.7e-40	29.4
AZY35295.1\|3268262_3268598_+\|holin	phage holin family protein	NA	NA	NA	NA
AZY35296.1\|3268597_3269440_+	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA
AZY35297.1\|3269538_3270489_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_26

3282318 : 3333197

Planktothrix_phage(33.33%)

integrase,protease,transposase,tRNA

attL 3315993:3316011|attR 3335881:3335899

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY35306.1\|3282318_3283269_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY36168.1\|3283581_3285060_+	phospholipase D family protein	NA	NA	NA	NA
AZY35307.1\|3285066_3286176_-	molybdenum import ATP-binding protein ModC	G9BWD6	Planktothrix_phage	7.5e-23	34.5
AZY35308.1\|3286187_3286868_-	molybdate ABC transporter permease subunit	NA	NA	NA	NA
AZY35309.1\|3286889_3287645_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY36169.1\|3287780_3288665_-	alpha/beta hydrolase	NA	NA	NA	NA
AZY35310.1\|3288752_3289334_+	hypothetical protein	NA	NA	NA	NA
AZY35311.1\|3289426_3289549_-	hypothetical protein	NA	NA	NA	NA
AZY35312.1\|3289594_3289894_-	DUF4148 domain-containing protein	NA	NA	NA	NA
AZY36170.1\|3290045_3290471_-	hypothetical protein	NA	NA	NA	NA
AZY35313.1\|3292677_3293181_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AZY35314.1\|3293196_3294147_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35315.1\|3294133_3294331_-	hypothetical protein	NA	NA	NA	NA
AZY35316.1\|3294674_3295448_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY35317.1\|3295580_3296591_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY35318.1\|3296742_3298398_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA
AZY35319.1\|3298452_3298794_-	cupin domain-containing protein	NA	NA	NA	NA
AZY35320.1\|3298807_3300247_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
AZY35321.1\|3300379_3301195_-	MerR family transcriptional regulator	NA	NA	NA	NA
AZY35322.1\|3301213_3301402_+	hypothetical protein	NA	NA	NA	NA
AZY35323.1\|3301388_3302339_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35324.1\|3303726_3304674_+	hypothetical protein	NA	NA	NA	NA
AZY35325.1\|3304900_3305641_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY35326.1\|3305726_3306677_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35327.1\|3308118_3309690_-	winged helix family transcriptional regulator	NA	NA	NA	NA
AZY35328.1\|3310022_3311876_+	hypothetical protein	NA	NA	NA	NA
AZY35329.1\|3311920_3314485_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
AZY35330.1\|3314903_3315854_+\|transposase	IS481 family transposase	NA	NA	NA	NA
3315993:3316011	attL	NA	NA	NA	NA
AZY35331.1\|3318719_3319214_-	DUF4276 domain-containing protein	NA	NA	NA	NA
AZY35332.1\|3319230_3320181_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35333.1\|3320167_3320368_-	hypothetical protein	NA	NA	NA	NA
AZY35334.1\|3320364_3321576_-	chromosome segregation protein SMC	NA	NA	NA	NA
AZY35335.1\|3321591_3324543_-	restriction endonuclease subunit M	G8I4P9	Mycobacterium_phage	2.9e-21	25.1
AZY35336.1\|3324544_3327664_-	restriction endonuclease	NA	NA	NA	NA
AZY36171.1\|3327660_3327801_-	DEAD/DEAH box helicase	NA	NA	NA	NA
AZY35337.1\|3327811_3328858_-	Fic family protein	NA	NA	NA	NA
AZY35338.1\|3329199_3330327_-\|integrase	site-specific integrase	A0A1B0VMI6	Pseudomonas_phage	1.4e-48	33.6
AZY35339.1\|3330606_3331698_-	redox-regulated ATPase YchF	NA	NA	NA	NA
AZY35340.1\|3331770_3332553_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AZY35341.1\|3332549_3333197_-\|tRNA	peptidyl-tRNA hydrolase	NA	NA	NA	NA
3335881:3335899	attR	NA	NA	NA	NA

DBSCAN-SWA_27

3382084 : 3435825

Staphylococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY35378.1\|3382084_3383035_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35379.1\|3383439_3384084_-	urease accessory protein UreG	NA	NA	NA	NA
AZY35380.1\|3384108_3384693_-	urease accessory protein UreF	NA	NA	NA	NA
AZY35381.1\|3384793_3385411_-	urease accessory protein UreE	NA	NA	NA	NA
AZY35382.1\|3385413_3387129_-	urease subunit alpha	NA	NA	NA	NA
AZY35383.1\|3387125_3387434_-	urease subunit beta	NA	NA	NA	NA
AZY35384.1\|3387450_3388086_-	urease accessory protein UreJ	NA	NA	NA	NA
AZY35385.1\|3388112_3388415_-	urease subunit gamma	NA	NA	NA	NA
AZY35386.1\|3388515_3389370_-	urease accessory protein UreD	NA	NA	NA	NA
AZY35387.1\|3389951_3390224_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AZY35388.1\|3390641_3391049_-	GFA family protein	NA	NA	NA	NA
AZY35389.1\|3391418_3392213_-	GntR family transcriptional regulator	NA	NA	NA	NA
AZY35390.1\|3392313_3393549_+	methylaspartate ammonia-lyase	NA	NA	NA	NA
AZY35391.1\|3393617_3394634_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY35392.1\|3394630_3396022_+	MmgE/PrpD family protein	NA	NA	NA	NA
AZY35393.1\|3396018_3397215_+	MFS transporter	NA	NA	NA	NA
AZY35394.1\|3397211_3398750_-	SpoVR family protein	NA	NA	NA	NA
AZY35395.1\|3398746_3400006_-	hypothetical protein	NA	NA	NA	NA
AZY35396.1\|3401946_3402897_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35397.1\|3403663_3404758_-	CoA transferase	NA	NA	NA	NA
AZY35398.1\|3404750_3406085_-	phenylacetate--CoA ligase family protein	NA	NA	NA	NA
AZY35399.1\|3406038_3406722_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY35400.1\|3406747_3407911_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
AZY35401.1\|3407907_3408909_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY35402.1\|3408908_3409781_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY35403.1\|3409777_3410527_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.9e-09	27.8
AZY35404.1\|3410523_3411315_-	ABC transporter ATP-binding protein	A0A1M7XV31	Cedratvirus	1.7e-08	29.4
AZY35405.1\|3411311_3412451_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY35406.1\|3412759_3413512_+	KR domain-containing protein	NA	NA	NA	NA
AZY35407.1\|3413545_3414328_+	enoyl-CoA hydratase	NA	NA	NA	NA
AZY35408.1\|3414331_3414721_+	DNA-binding protein	NA	NA	NA	NA
AZY35409.1\|3415860_3416724_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA
AZY35410.1\|3416759_3417848_+	hypothetical protein	NA	NA	NA	NA
AZY35411.1\|3417844_3418795_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35412.1\|3418781_3419150_-	hypothetical protein	NA	NA	NA	NA
AZY35413.1\|3419148_3422127_+	hypothetical protein	NA	NA	NA	NA
AZY35414.1\|3423053_3423932_+	fatty acid desaturase	NA	NA	NA	NA
AZY35415.1\|3425880_3426831_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35416.1\|3426827_3427295_-	ribonuclease HI	J9Q745	Salmonella_phage	5.6e-36	50.7
AZY35417.1\|3427337_3428108_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AZY35418.1\|3428128_3428929_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
AZY35419.1\|3428939_3430349_+	lytic transglycosylase	NA	NA	NA	NA
AZY35420.1\|3430443_3431229_+	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA
AZY36174.1\|3431468_3432485_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY35421.1\|3432592_3432985_-	OsmC family peroxiredoxin	NA	NA	NA	NA
AZY35422.1\|3433122_3433803_+	DUF533 domain-containing protein	NA	NA	NA	NA
AZY35423.1\|3433807_3434806_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY35424.1\|3434874_3435825_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_28

3441980 : 3501278

Acinetobacter_phage(27.27%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY35428.1\|3441980_3443744_+\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	5.0e-162	50.0
AZY35429.1\|3443855_3444734_+	septum site-determining protein MinC	NA	NA	NA	NA
AZY35430.1\|3444846_3445662_+	septum site-determining protein MinD	NA	NA	NA	NA
AZY35431.1\|3445665_3445917_+	cell division topological specificity factor	NA	NA	NA	NA
AZY36175.1\|3446001_3447018_-\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AZY35432.1\|3447348_3447570_-	hypothetical protein	NA	NA	NA	NA
AZY35433.1\|3449930_3450848_-	EamA/RhaT family transporter	NA	NA	NA	NA
AZY35434.1\|3451345_3452554_-	ABC transporter permease	NA	NA	NA	NA
AZY35435.1\|3452633_3454205_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY35436.1\|3454322_3455258_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
AZY35437.1\|3455446_3456391_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	8.4e-07	23.2
AZY35438.1\|3456459_3456675_-	hypothetical protein	NA	NA	NA	NA
AZY35439.1\|3456958_3462676_+	excinuclease ABC subunit A	A0A1B1IVR3	uncultured_Mediterranean_phage	1.0e-195	39.5
AZY35440.1\|3462681_3463809_+	aminodeoxychorismate synthase, component I	S4VT78	Pandoravirus	3.8e-38	37.8
AZY35441.1\|3463864_3464491_+	aminotransferase	NA	NA	NA	NA
AZY36176.1\|3464762_3465779_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY35442.1\|3465874_3466585_-	oxidoreductase	NA	NA	NA	NA
AZY36177.1\|3466581_3467571_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY35443.1\|3467702_3469298_+	acyl-CoA synthetase	NA	NA	NA	NA
AZY35444.1\|3469300_3470038_+	GntR family transcriptional regulator	NA	NA	NA	NA
AZY35445.1\|3470193_3471066_-\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	NA	NA	NA	NA
AZY35446.1\|3471334_3472555_+	MFS transporter	NA	NA	NA	NA
AZY35447.1\|3472551_3473211_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA
AZY35448.1\|3473282_3473915_+	pyridoxine/pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
AZY35449.1\|3473944_3474463_+	flavin reductase	NA	NA	NA	NA
AZY35450.1\|3474473_3475583_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
AZY35451.1\|3475629_3476484_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
AZY35452.1\|3476485_3477388_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY35453.1\|3478610_3479561_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35454.1\|3481315_3482305_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35455.1\|3482480_3483269_-	indole-3-glycerol-phosphate synthase	A0A0P0IR83	Acinetobacter_phage	5.1e-66	53.0
AZY35456.1\|3483265_3484297_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	7.4e-73	42.7
AZY35457.1\|3484315_3484879_-	type 1 glutamine amidotransferase	A0A0P0IKJ1	Acinetobacter_phage	1.1e-65	62.1
AZY35458.1\|3484934_3486455_-	anthranilate synthase component I	S4VT78	Pandoravirus	9.0e-43	32.1
AZY35459.1\|3486718_3487423_-	phosphoglycolate phosphatase	NA	NA	NA	NA
AZY35460.1\|3487430_3488168_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
AZY35461.1\|3488273_3488648_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
AZY35462.1\|3488690_3489980_+	hypothetical protein	NA	NA	NA	NA
AZY35463.1\|3489976_3491146_+	ubiquinone biosynthesis protein UbiH	NA	NA	NA	NA
AZY35464.1\|3491142_3491982_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA
AZY35465.1\|3492041_3492977_+	hydroxyacid dehydrogenase	A0A1J0F959	Only_Syngen_Nebraska_virus	6.4e-15	27.7
AZY35466.1\|3492989_3493940_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35467.1\|3494038_3495001_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	4.6e-93	64.5
AZY35468.1\|3495032_3495392_-	dihydroneopterin aldolase	NA	NA	NA	NA
AZY35469.1\|3495516_3496419_+	NAD(P)/FAD-dependent oxidoreductase	G3MA85	Bacillus_virus	1.9e-08	24.0
AZY35470.1\|3496420_3498193_-	PDZ domain-containing protein	NA	NA	NA	NA
AZY35471.1\|3498227_3499004_+	enoyl-CoA hydratase	NA	NA	NA	NA
AZY35472.1\|3500327_3501278_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_29

3516216 : 3574289

Planktothrix_phage(12.5%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY35484.1\|3516216_3517167_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35485.1\|3517295_3518429_-	peptidase	NA	NA	NA	NA
AZY35486.1\|3518472_3519378_-	alpha/beta hydrolase	NA	NA	NA	NA
AZY35487.1\|3519380_3521081_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.0e-15	32.7
AZY35488.1\|3521077_3521998_-	ABC transporter permease	NA	NA	NA	NA
AZY35489.1\|3522005_3522983_-	ABC transporter permease	NA	NA	NA	NA
AZY35490.1\|3523041_3524076_-	succinylglutamate desuccinylase	NA	NA	NA	NA
AZY35491.1\|3526050_3526287_-	hypothetical protein	NA	NA	NA	NA
AZY35492.1\|3526413_3527277_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
AZY35493.1\|3527365_3528187_+	enoyl-CoA hydratase	NA	NA	NA	NA
AZY35494.1\|3528266_3529004_-	enoyl-CoA hydratase	NA	NA	NA	NA
AZY35495.1\|3529000_3529993_-	nitronate monooxygenase	NA	NA	NA	NA
AZY35496.1\|3530106_3530769_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY35497.1\|3530813_3531962_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AZY35498.1\|3534285_3535236_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35499.1\|3535576_3536527_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35500.1\|3536625_3537576_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35501.1\|3537872_3538370_+	hypothetical protein	NA	NA	NA	NA
AZY35502.1\|3538412_3540188_+	copper resistance system multicopper oxidase	NA	NA	NA	NA
AZY36180.1\|3540234_3541062_+	copper resistance protein B	NA	NA	NA	NA
AZY35503.1\|3541068_3541803_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AZY35504.1\|3542972_3543767_-	IclR family transcriptional regulator	NA	NA	NA	NA
AZY35505.1\|3544056_3544647_+	cysteine dioxygenase	NA	NA	NA	NA
AZY35506.1\|3544680_3546009_-	amidase	NA	NA	NA	NA
AZY35507.1\|3546083_3547229_-	transporter	NA	NA	NA	NA
AZY35508.1\|3547340_3548339_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35509.1\|3548301_3548736_+	carbon monoxide dehydrogenase	NA	NA	NA	NA
AZY35510.1\|3550252_3551137_+	EamA/RhaT family transporter	NA	NA	NA	NA
AZY35511.1\|3551133_3552339_-	cardiolipin synthase ClsB	NA	NA	NA	NA
AZY35512.1\|3552335_3553196_-	endonuclease	NA	NA	NA	NA
AZY35513.1\|3553308_3555099_-\|tRNA	aspartate--tRNA ligase	A0A1V0SAC0	Catovirus	6.5e-08	25.5
AZY35514.1\|3555139_3555805_-	DUF502 domain-containing protein	A0A2I7S9X1	Vibrio_phage	6.7e-11	28.4
AZY35515.1\|3555805_3556114_-	FmdB family transcriptional regulator	NA	NA	NA	NA
AZY36181.1\|3556279_3557566_-	hypothetical protein	NA	NA	NA	NA
AZY35516.1\|3558999_3559950_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35517.1\|3561901_3563116_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA
AZY35518.1\|3563221_3564211_+	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	4.3e-38	37.7
AZY35519.1\|3564207_3564816_+	hydrolase	E3T535	Cafeteria_roenbergensis_virus	5.2e-10	26.1
AZY35520.1\|3564828_3565458_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
AZY35521.1\|3565454_3566075_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
AZY35522.1\|3566106_3566898_+	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	9.5e-20	27.4
AZY35523.1\|3567740_3568205_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
AZY35524.1\|3568223_3569150_+	HPr kinase/phosphorylase	NA	NA	NA	NA
AZY35525.1\|3569203_3570490_-	cytochrome c	NA	NA	NA	NA
AZY35526.1\|3571420_3572293_+	RNase adaptor protein RapZ	A0A1P8D5W0	Corynebacterium_phage	2.4e-08	34.5
AZY35527.1\|3572289_3573240_+	septal ring lytic transglycosylase RlpA family protein	F5B3X9	Synechococcus_phage	6.9e-17	47.2
AZY35528.1\|3573338_3574289_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_30

4006501 : 4071413

Planktothrix_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY35916.1\|4006501_4006987_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35917.1\|4007205_4008186_+	protein BugT	NA	NA	NA	NA
AZY35918.1\|4008452_4009262_+	Pertussis toxin subunit 1	NA	NA	NA	NA
AZY35919.1\|4009301_4009982_+	Pertussis toxin subunit 2	NA	NA	NA	NA
AZY35920.1\|4009975_4010434_+	pertussis toxin subunit 4	NA	NA	NA	NA
AZY35921.1\|4010445_4010808_+	Pertussis toxin subunit 5	NA	NA	NA	NA
AZY35922.1\|4010890_4011574_+	Pertussis toxin subunit 3	NA	NA	NA	NA
AZY35923.1\|4011629_4011938_+	type IV secretion protein A	NA	NA	NA	NA
AZY35924.1\|4011956_4012271_+	type IV secretion protein B	NA	NA	NA	NA
AZY35925.1\|4012267_4014742_+	type IV secretion system protein PtlC	NA	NA	NA	NA
AZY35926.1\|4014749_4016141_+	type IV secretion system protein PtlD	NA	NA	NA	NA
AZY35927.1\|4016137_4016323_+	type IV secretion protein I	NA	NA	NA	NA
AZY35928.1\|4016301_4017003_+	type IV secretion protein E	NA	NA	NA	NA
AZY35929.1\|4016999_4017821_+	type IV secretion system protein PtlF	NA	NA	NA	NA
AZY36203.1\|4017801_4018926_+	type IV secretion system protein PtlG	NA	NA	NA	NA
AZY35930.1\|4018918_4019938_+	type IV secretion protein H	NA	NA	NA	NA
AZY35931.1\|4020143_4021178_-	EamA/RhaT family transporter	NA	NA	NA	NA
AZY36204.1\|4021278_4022070_+	AraC family transcriptional regulator	NA	NA	NA	NA
AZY35932.1\|4022152_4022527_+	DUF1232 domain-containing protein	NA	NA	NA	NA
AZY35933.1\|4022504_4023914_+	DUF2868 domain-containing protein	NA	NA	NA	NA
AZY35934.1\|4023906_4025289_+	DUF3482 domain-containing protein	A0A0R6PHS5	Moraxella_phage	9.9e-57	38.9
AZY35935.1\|4025623_4027228_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY35936.1\|4027263_4028277_+	ABC transporter permease	NA	NA	NA	NA
AZY35937.1\|4028287_4029214_+	ABC transporter permease	NA	NA	NA	NA
AZY35938.1\|4029604_4030555_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35939.1\|4030724_4031951_+	bifunctional glutamate N-acetyltransferase/amino-acid N-acetyltransferase	NA	NA	NA	NA
AZY35940.1\|4032150_4033017_+	DUF815 domain-containing protein	NA	NA	NA	NA
AZY35941.1\|4033009_4033972_+	NUDIX domain-containing protein	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	1.9e-06	53.4
AZY35942.1\|4034072_4035023_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35943.1\|4035121_4036072_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35944.1\|4036170_4037121_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY35945.1\|4037117_4038611_-	RND transporter	NA	NA	NA	NA
AZY35946.1\|4038607_4041715_-	multidrug transporter subunit MdtC	NA	NA	NA	NA
AZY35947.1\|4041711_4044780_-	multidrug transporter subunit MdtB	NA	NA	NA	NA
AZY35948.1\|4044776_4046027_-	multidrug transporter subunit MdtA	NA	NA	NA	NA
AZY35949.1\|4046207_4046969_-	cell division protein ZapD	NA	NA	NA	NA
AZY35950.1\|4047001_4047652_-	dephospho-CoA kinase	NA	NA	NA	NA
AZY35951.1\|4047654_4048494_-	prepilin peptidase	NA	NA	NA	NA
AZY35952.1\|4048734_4049478_+	hypothetical protein	NA	NA	NA	NA
AZY35953.1\|4049560_4049908_-	LuxR family transcriptional regulator	NA	NA	NA	NA
AZY35954.1\|4050005_4050848_-	pantoate--beta-alanine ligase	NA	NA	NA	NA
AZY35955.1\|4050892_4051780_-	segregation/condensation protein A	NA	NA	NA	NA
AZY35956.1\|4051806_4051995_-	DUF3460 domain-containing protein	NA	NA	NA	NA
AZY35957.1\|4052092_4053550_+	MFS transporter	NA	NA	NA	NA
AZY35958.1\|4053536_4055063_+	glycerol kinase	NA	NA	NA	NA
AZY35959.1\|4055081_4055549_-	hypothetical protein	NA	NA	NA	NA
AZY35960.1\|4055548_4056571_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY35961.1\|4056691_4057432_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.4e-35	39.7
AZY35962.1\|4057486_4058587_-	amino acid ABC transporter permease	NA	NA	NA	NA
AZY35963.1\|4058588_4059779_-	amino acid ABC transporter permease	NA	NA	NA	NA
AZY35964.1\|4059898_4060915_-	amino acid ABC transporter substrate-binding protein	A0A1B1IT51	uncultured_Mediterranean_phage	1.0e-71	42.1
AZY35965.1\|4061233_4061905_+	cell division ATP-binding protein FtsE	G9BWD6	Planktothrix_phage	9.5e-29	38.2
AZY35966.1\|4061901_4062810_+	ABC transporter permease	NA	NA	NA	NA
AZY35967.1\|4063021_4063669_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA
AZY35968.1\|4067520_4068597_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
AZY35969.1\|4068607_4069417_-	transcriptional regulator	NA	NA	NA	NA
AZY35970.1\|4069506_4070280_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AZY35971.1\|4070462_4071413_+\|transposase	IS481 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP025477

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection