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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025477 Bordetella pertussis strain I859 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 30 0

Results visualization

1. CP025477
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025477_1 250590-250674 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025477_2 432033-432126 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025477_3 995302-995396 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025477_4 1820855-1820982 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025477_5 3432482-3432591 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 122073 110 Planktothrix_phage(16.67%) protease,transposase,tRNA NA
DBSCAN-SWA_2 164892 : 225403 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,transposase,tRNA NA
DBSCAN-SWA_3 233335 : 286923 48 Bacillus_phage(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_4 390856 : 448365 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_5 619752 : 720216 111 uncultured_Caudovirales_phage(13.79%) tail,terminase,transposase,tRNA NA
DBSCAN-SWA_6 747141 : 820303 58 Streptococcus_phage(16.67%) transposase NA
DBSCAN-SWA_7 853050 : 902314 40 Vibrio_phage(33.33%) holin,transposase NA
DBSCAN-SWA_8 911926 : 976866 60 Bacillus_phage(18.18%) transposase NA
DBSCAN-SWA_9 996266 : 1059417 53 Enterococcus_phage(16.67%) transposase NA
DBSCAN-SWA_10 1065401 : 1125464 48 uncultured_Mediterranean_phage(37.5%) holin,transposase,tRNA NA
DBSCAN-SWA_11 1156530 : 1218803 50 Erysipelothrix_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_12 1270677 : 1327888 50 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_13 1573160 : 1644314 54 Ectocarpus_siliculosus_virus(10.0%) transposase NA
DBSCAN-SWA_14 1665105 : 1726453 52 uncultured_Caudovirales_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_15 1832641 : 1891911 49 Klosneuvirus(40.0%) protease,transposase,tRNA NA
DBSCAN-SWA_16 1902151 : 1945425 44 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_17 1975198 : 2039567 52 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_18 2132722 : 2196812 54 Lake_Baikal_phage(18.18%) protease,transposase,tRNA NA
DBSCAN-SWA_19 2476007 : 2534251 53 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_20 2576529 : 2643029 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_21 2671144 : 2709605 40 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_22 2808732 : 2863249 49 Diachasmimorpha_longicaudata_entomopoxvirus(20.0%) transposase NA
DBSCAN-SWA_23 2871274 : 2928060 40 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_24 2958446 : 3002137 42 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_25 3235651 : 3270489 36 Erwinia_phage(20.0%) holin,transposase NA
DBSCAN-SWA_26 3282318 : 3333197 40 Planktothrix_phage(33.33%) integrase,protease,transposase,tRNA attL 3315993:3316011|attR 3335881:3335899
DBSCAN-SWA_27 3382084 : 3435825 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_28 3441980 : 3501278 48 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_29 3516216 : 3574289 47 Planktothrix_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_30 4006501 : 4071413 58 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage