CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP025570	Acidipropionibacterium jensenii strain JS280 chromosome, complete genome	10 crisprs	cas1,csb3,cas3,csb2gr5,cas7,DEDDh,WYL,DinG,csa3	2	12	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP025570_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025570_1

316696-320684

Unclear

Consensus_repeat	Method
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CRISPRCasFinder
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CRT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	PILER-CR

55 spacers

cas2,cas1,csb3,cas3,csb2gr5,cas7

The CRISPR arrays of CP025570_1

>merge|CP025570|1|316696-320684|CRISPRCasFinder,CRT,PILER-CR
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACGGTAGCCGCGAGGCCCAGAGAGCATGCCATCAAGGCGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACTTCCTCATCCCGTCGTTCGTCGAGGTGGTGACCGCGCACGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACGGGTCGAGGGAGGCGCGGCATGAGCGGCGAGTTCGAGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACAGGCCGAGCTGGTCCGCGACGTCGGAGAACTCCTTGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACTTCTTCGTCGGCGCATCCTCCTGCACCCATGTCGCGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACGTGGGTCTCCTTCGCGGGATCGCCCCACGCTTTCGCGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACTGAAGCCCCACGAGTTCGTCAGCGCGGTCCACAGGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACGTCTGGTCTGTGGTGTGGGGTGCGATCTCCGCGTTGCCTCAACGAAGGGCTCCTCTGGAAAGAGGGGCGACCTGGCTAGCTGCCGTGTGCAGTTCATATGCACAAAGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACGGGGTGCTCGGGATGCTCGGCGATAGCGGCCAGCGTGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCTGGGTCGACAAGGCCAACTACGGCCGCGTCAACATGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACTGGCGTCCTTGCCGGTCTGGGCGGTCATCCGGCCGATGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCTGGTCGATGAACGGGTCGGGGGTCTGCGGATCATTGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCGCGGAACCTGGAATGAGCCGTTCGCCCGCGACCTGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACACGGGAACTCGATCTCACTGGTGACGTCGCGCACCGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCCCCCCGTGCCGCCGGCGACACGGTTCGCGATCTTGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACTCCTCGGGGTAGGTGACGACGGGGCAGTGGTAGCGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACTGCTGGATGAAGTCTTCCTGCTCGGAGCGCTGCGCGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACTCGAGGACGTGGACCCCGTCGAGGTCCAGGCCTGGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACATGATGACCGCCGTACCGAAGACCGCCAGGTCGAAGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCTGCCTGCGGGACCCCAATGGAGACCCGATATCTCGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCTGCCAGCTGCTCTTGTGGGTTGCTCATGGCCGCCAGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCTCACGGGTGATGTCCCGCAGCTGCCCGGCAGGCCCCGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACTCCTTGCGACGTGGTGGACTCCCCGGACCAATTAGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACTGGGAGACCGATGGCGACGAGCGGCATATCCACGAGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACATCGCTCCTGGCCCGACCCCTGAACCTGACAATCGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACGGACGGCAGACAGTTCTGCAAGGTCTCGCTCGACTACGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCTTCGACTTCACCCACGCCGAGGCCTTGTCGACCGCGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACGGATCTGCGTCTGGCGAAGGACGGCAATCAGCAGTAGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCAGTGGATCGCCGACGAGCTGACGAAGTTCAGGAAGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACTGTACGGCGTGTCGGGTCGGGCGAACATGGGGAGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCCAGATCAGTCGTCGCCCAGATTGATATCCAGACTGCAAGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACGGCCATGCGCTCCGAGTCAGTCGGCCACAGGTGCGCGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACTTGACTGATGATGAGTTCATCTACAACGCGTGCGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCGGTGAGCCTGGAACCGTCGTCCTGCGCCAAGGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCGGCGAATGACCCTGTACCGCGACCCGACGATCAAGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCCAGACGGCCAGCCTGTTCTCCGAGCACTCGGACGTGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACAGTGGGCGGGCGCCGACCACGGCGGTGTTCCCCCAGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACTGGGCCCGAATGTCGTTGATGCCATCGAGTGGTGCCAGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACTGTTCCGGGGAGTCGCCACATGAGGCGGTCCTCGTCGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACACTGGGAGGACTCCCTGTGCCCCGGCTGCGGCAAGCCGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCCTGGACGAGGTTCTTCATGAACACCAACCAGGGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACGTCCCCGTCGTGCTGCGTCCGGCCGCCGGGGTTCGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCGAGATGCCATCATCGGTGACATAGCCCAGGTCAAGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACTCCGTCGTCGGCCCACTTGACCGCCGCATGGCCTTCGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACTCCCAGTCAGGAGATGACACCATCGCATCCGTCCTCGCGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCGTCGACCCCGAACCGGGCCCGTCGATCTGCTGCAGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCTCCCGGCTCCAGATGGATGCCATGCGGGTCCGCGCTGGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACGAGAGTGGTGTTGGGATCCATCCGGTGCAGGGAGCGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCTGCGGGTGATGGCGGAATTGGTGTCGATCTTCGGAAGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCCAAGGATCGCCCCAGTCACCGGCGACGCAAGCCCGTCGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACTGGCGCGACAAGGGCGCCCTCCCGCTGCACGACAAGGAGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCACCGGATGACATCGGTGCGGCAATGACAGGGGCGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACGGAGTTGGAGCCGGGGGAATCGTCTGGCTCTGGGGAGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACAGCAGCCATGGACTGGATGGCGGTCACCTTGAGCCGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC

>CP025570|1|1|316696-320684|CRISPRCasFinder
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GGTAGCCGCGAGGCCCAGAGAGCATGCCATCAAGGC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TTCCTCATCCCGTCGTTCGTCGAGGTGGTGACCGCGCAC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GGGTCGAGGGAGGCGCGGCATGAGCGGCGAGTTCGA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	AGGCCGAGCTGGTCCGCGACGTCGGAGAACTCCTTG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TTCTTCGTCGGCGCATCCTCCTGCACCCATGTCGC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GTGGGTCTCCTTCGCGGGATCGCCCCACGCTTTCGC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGAAGCCCCACGAGTTCGTCAGCGCGGTCCACAGG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GTCTGGTCTGTGGTGTGGGGTGCGATCTCCGCGTT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGGGCGAC	CTGGCTAGCTGCCGTGTGCAGTTCATATGCACAAA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GGGGTGCTCGGGATGCTCGGCGATAGCGGCCAGCGT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTGGGTCGACAAGGCCAACTACGGCCGCGTCAACAT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGGCGTCCTTGCCGGTCTGGGCGGTCATCCGGCCGAT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTGGTCGATGAACGGGTCGGGGGTCTGCGGATCATTG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CGCGGAACCTGGAATGAGCCGTTCGCCCGCGACCT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	ACGGGAACTCGATCTCACTGGTGACGTCGCGCACCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CCCCCCGTGCCGCCGGCGACACGGTTCGCGATCTT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TCCTCGGGGTAGGTGACGACGGGGCAGTGGTAGCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGCTGGATGAAGTCTTCCTGCTCGGAGCGCTGCGC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TCGAGGACGTGGACCCCGTCGAGGTCCAGGCCTGG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	ATGATGACCGCCGTACCGAAGACCGCCAGGTCGAA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTGCCTGCGGGACCCCAATGGAGACCCGATATCTC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTGCCAGCTGCTCTTGTGGGTTGCTCATGGCCGCCA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTCACGGGTGATGTCCCGCAGCTGCCCGGCAGGCCCC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TCCTTGCGACGTGGTGGACTCCCCGGACCAATTA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGGGAGACCGATGGCGACGAGCGGCATATCCACGA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	ATCGCTCCTGGCCCGACCCCTGAACCTGACAATCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GGACGGCAGACAGTTCTGCAAGGTCTCGCTCGACTAC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTTCGACTTCACCCACGCCGAGGCCTTGTCGACCGC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GGATCTGCGTCTGGCGAAGGACGGCAATCAGCAGTA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CAGTGGATCGCCGACGAGCTGACGAAGTTCAGGAA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGTACGGCGTGTCGGGTCGGGCGAACATGGGGA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CCAGATCAGTCGTCGCCCAGATTGATATCCAGACTGCAA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GGCCATGCGCTCCGAGTCAGTCGGCCACAGGTGCGC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TTGACTGATGATGAGTTCATCTACAACGCGTGCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CGGTGAGCCTGGAACCGTCGTCCTGCGCCAAGG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CGGCGAATGACCCTGTACCGCGACCCGACGATCAA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CCAGACGGCCAGCCTGTTCTCCGAGCACTCGGACGT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	AGTGGGCGGGCGCCGACCACGGCGGTGTTCCCCCA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGGGCCCGAATGTCGTTGATGCCATCGAGTGGTGCCAG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGTTCCGGGGAGTCGCCACATGAGGCGGTCCTCGTC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	ACTGGGAGGACTCCCTGTGCCCCGGCTGCGGCAAGCC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CCTGGACGAGGTTCTTCATGAACACCAACCAGGG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GTCCCCGTCGTGCTGCGTCCGGCCGCCGGGGTTC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CGAGATGCCATCATCGGTGACATAGCCCAGGTCAAG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TCCGTCGTCGGCCCACTTGACCGCCGCATGGCCTTC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TCCCAGTCAGGAGATGACACCATCGCATCCGTCCTCGC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CGTCGACCCCGAACCGGGCCCGTCGATCTGCTGCAG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTCCCGGCTCCAGATGGATGCCATGCGGGTCCGCGCTGG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GAGAGTGGTGTTGGGATCCATCCGGTGCAGGGAGCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTGCGGGTGATGGCGGAATTGGTGTCGATCTTCGGAAG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CCAAGGATCGCCCCAGTCACCGGCGACGCAAGCCCGTC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGGCGCGACAAGGGCGCCCTCCCGCTGCACGACAAGGA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CACCGGATGACATCGGTGCGGCAATGACAGGGGCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GGAGTTGGAGCCGGGGGAATCGTCTGGCTCTGGGGA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	AGCAGCCATGGACTGGATGGCGGTCACCTTGAGCCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC

>CP025570|1|1|316696-320684|CRT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GGTAGCCGCGAGGCCCAGAGAGCATGCCATCAAGGC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TTCCTCATCCCGTCGTTCGTCGAGGTGGTGACCGCGCAC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GGGTCGAGGGAGGCGCGGCATGAGCGGCGAGTTCGA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	AGGCCGAGCTGGTCCGCGACGTCGGAGAACTCCTTG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TTCTTCGTCGGCGCATCCTCCTGCACCCATGTCGC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GTGGGTCTCCTTCGCGGGATCGCCCCACGCTTTCGC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGAAGCCCCACGAGTTCGTCAGCGCGGTCCACAGG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GTCTGGTCTGTGGTGTGGGGTGCGATCTCCGCGTT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGGGCGAC	CTGGCTAGCTGCCGTGTGCAGTTCATATGCACAAA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GGGGTGCTCGGGATGCTCGGCGATAGCGGCCAGCGT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTGGGTCGACAAGGCCAACTACGGCCGCGTCAACAT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGGCGTCCTTGCCGGTCTGGGCGGTCATCCGGCCGAT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTGGTCGATGAACGGGTCGGGGGTCTGCGGATCATTG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CGCGGAACCTGGAATGAGCCGTTCGCCCGCGACCT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	ACGGGAACTCGATCTCACTGGTGACGTCGCGCACCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CCCCCCGTGCCGCCGGCGACACGGTTCGCGATCTT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TCCTCGGGGTAGGTGACGACGGGGCAGTGGTAGCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGCTGGATGAAGTCTTCCTGCTCGGAGCGCTGCGC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TCGAGGACGTGGACCCCGTCGAGGTCCAGGCCTGG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	ATGATGACCGCCGTACCGAAGACCGCCAGGTCGAA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTGCCTGCGGGACCCCAATGGAGACCCGATATCTC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTGCCAGCTGCTCTTGTGGGTTGCTCATGGCCGCCA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTCACGGGTGATGTCCCGCAGCTGCCCGGCAGGCCCC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TCCTTGCGACGTGGTGGACTCCCCGGACCAATTA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGGGAGACCGATGGCGACGAGCGGCATATCCACGA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	ATCGCTCCTGGCCCGACCCCTGAACCTGACAATCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GGACGGCAGACAGTTCTGCAAGGTCTCGCTCGACTAC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTTCGACTTCACCCACGCCGAGGCCTTGTCGACCGC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GGATCTGCGTCTGGCGAAGGACGGCAATCAGCAGTA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CAGTGGATCGCCGACGAGCTGACGAAGTTCAGGAA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGTACGGCGTGTCGGGTCGGGCGAACATGGGGA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CCAGATCAGTCGTCGCCCAGATTGATATCCAGACTGCAA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GGCCATGCGCTCCGAGTCAGTCGGCCACAGGTGCGC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TTGACTGATGATGAGTTCATCTACAACGCGTGCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CGGTGAGCCTGGAACCGTCGTCCTGCGCCAAGG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CGGCGAATGACCCTGTACCGCGACCCGACGATCAA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CCAGACGGCCAGCCTGTTCTCCGAGCACTCGGACGT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	AGTGGGCGGGCGCCGACCACGGCGGTGTTCCCCCA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGGGCCCGAATGTCGTTGATGCCATCGAGTGGTGCCAG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGTTCCGGGGAGTCGCCACATGAGGCGGTCCTCGTC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	ACTGGGAGGACTCCCTGTGCCCCGGCTGCGGCAAGCC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CCTGGACGAGGTTCTTCATGAACACCAACCAGGG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GTCCCCGTCGTGCTGCGTCCGGCCGCCGGGGTTC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CGAGATGCCATCATCGGTGACATAGCCCAGGTCAAG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TCCGTCGTCGGCCCACTTGACCGCCGCATGGCCTTC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TCCCAGTCAGGAGATGACACCATCGCATCCGTCCTCGC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CGTCGACCCCGAACCGGGCCCGTCGATCTGCTGCAG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTCCCGGCTCCAGATGGATGCCATGCGGGTCCGCGCTGG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GAGAGTGGTGTTGGGATCCATCCGGTGCAGGGAGCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTGCGGGTGATGGCGGAATTGGTGTCGATCTTCGGAAG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CCAAGGATCGCCCCAGTCACCGGCGACGCAAGCCCGTC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGGCGCGACAAGGGCGCCCTCCCGCTGCACGACAAGGA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CACCGGATGACATCGGTGCGGCAATGACAGGGGCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GGAGTTGGAGCCGGGGGAATCGTCTGGCTCTGGGGA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	AGCAGCCATGGACTGGATGGCGGTCACCTTGAGCCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC

>CP025570|1|1|316915-320684|PILER-CR
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	AGGCCGAGCTGGTCCGCGACGTCGGAGAACTCCTTG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TTCTTCGTCGGCGCATCCTCCTGCACCCATGTCGC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GTGGGTCTCCTTCGCGGGATCGCCCCACGCTTTCGC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGAAGCCCCACGAGTTCGTCAGCGCGGTCCACAGG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GTCTGGTCTGTGGTGTGGGGTGCGATCTCCGCGTT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGGGCGAC	CTGGCTAGCTGCCGTGTGCAGTTCATATGCACAAA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GGGGTGCTCGGGATGCTCGGCGATAGCGGCCAGCGT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTGGGTCGACAAGGCCAACTACGGCCGCGTCAACAT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGGCGTCCTTGCCGGTCTGGGCGGTCATCCGGCCGAT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTGGTCGATGAACGGGTCGGGGGTCTGCGGATCATTG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CGCGGAACCTGGAATGAGCCGTTCGCCCGCGACCT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	ACGGGAACTCGATCTCACTGGTGACGTCGCGCACCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CCCCCCGTGCCGCCGGCGACACGGTTCGCGATCTT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TCCTCGGGGTAGGTGACGACGGGGCAGTGGTAGCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGCTGGATGAAGTCTTCCTGCTCGGAGCGCTGCGC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TCGAGGACGTGGACCCCGTCGAGGTCCAGGCCTGG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	ATGATGACCGCCGTACCGAAGACCGCCAGGTCGAA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTGCCTGCGGGACCCCAATGGAGACCCGATATCTC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTGCCAGCTGCTCTTGTGGGTTGCTCATGGCCGCCA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTCACGGGTGATGTCCCGCAGCTGCCCGGCAGGCCCC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TCCTTGCGACGTGGTGGACTCCCCGGACCAATTA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGGGAGACCGATGGCGACGAGCGGCATATCCACGA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	ATCGCTCCTGGCCCGACCCCTGAACCTGACAATCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GGACGGCAGACAGTTCTGCAAGGTCTCGCTCGACTAC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTTCGACTTCACCCACGCCGAGGCCTTGTCGACCGC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GGATCTGCGTCTGGCGAAGGACGGCAATCAGCAGTA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CAGTGGATCGCCGACGAGCTGACGAAGTTCAGGAA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGTACGGCGTGTCGGGTCGGGCGAACATGGGGA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CCAGATCAGTCGTCGCCCAGATTGATATCCAGACTGCAA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GGCCATGCGCTCCGAGTCAGTCGGCCACAGGTGCGC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TTGACTGATGATGAGTTCATCTACAACGCGTGCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CGGTGAGCCTGGAACCGTCGTCCTGCGCCAAGG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CGGCGAATGACCCTGTACCGCGACCCGACGATCAA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CCAGACGGCCAGCCTGTTCTCCGAGCACTCGGACGT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	AGTGGGCGGGCGCCGACCACGGCGGTGTTCCCCCA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGGGCCCGAATGTCGTTGATGCCATCGAGTGGTGCCAG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGTTCCGGGGAGTCGCCACATGAGGCGGTCCTCGTC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	ACTGGGAGGACTCCCTGTGCCCCGGCTGCGGCAAGCC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CCTGGACGAGGTTCTTCATGAACACCAACCAGGG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GTCCCCGTCGTGCTGCGTCCGGCCGCCGGGGTTC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CGAGATGCCATCATCGGTGACATAGCCCAGGTCAAG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TCCGTCGTCGGCCCACTTGACCGCCGCATGGCCTTC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TCCCAGTCAGGAGATGACACCATCGCATCCGTCCTCGC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CGTCGACCCCGAACCGGGCCCGTCGATCTGCTGCAG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTCCCGGCTCCAGATGGATGCCATGCGGGTCCGCGCTGG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GAGAGTGGTGTTGGGATCCATCCGGTGCAGGGAGCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTGCGGGTGATGGCGGAATTGGTGTCGATCTTCGGAAG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CCAAGGATCGCCCCAGTCACCGGCGACGCAAGCCCGTC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGGCGCGACAAGGGCGCCCTCCCGCTGCACGACAAGGA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CACCGGATGACATCGGTGCGGCAATGACAGGGGCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GGAGTTGGAGCCGGGGGAATCGTCTGGCTCTGGGGA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	AGCAGCCATGGACTGGATGGCGGTCACCTTGAGCCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
CP025570.1\|AZZ38627.1\|323791_325396_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187766
CP025570.1\|AZZ38621.1\|309114_310116_-\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|225132
CP025570.1\|AZZ38632.1\|332441_332939_-\|hypothetical-protein	unknown	unknown	unknown
CP025570.1\|AZZ40621.1\|315204_316452_-\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|376574
CP025570.1\|AZZ38620.1\|307827_309102_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270452
CP025570.1\|AZZ38629.1\|326377_329002_-\|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09696_cas3_CAS-I-U	gnl\|CDD\|274235
CP025570.1\|AZZ38630.1\|328998_330585_-\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl\|CDD\|274005
CP025570.1\|AZZ38622.1\|310295_311288_-\|right-handed-parallel-beta-helix-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379079
CP025570.1\|AZZ38625.1\|312738_313050_+\|hypothetical-protein	unknown	unknown	unknown
CP025570.1\|AZZ38628.1\|325367_326381_-\|hypothetical-protein	csb3	cd09764_csb3_CAS-I-U	gnl\|CDD\|187733
CP025570.1\|AZZ40622.1\|320932_322180_+\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|376574
CP025570.1\|AZZ40623.1\|333342_334347_+\|IS481-like-element-ISPfr15-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025570.1\|AZZ38624.1\|312032_312683_+\|ATP:cob(I)alamin-adenosyltransferase	unknown	unknown	gnl\|CDD\|376665
CP025570.1\|AZZ38623.1\|311188_311908_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
CP025570.1\|AZZ38619.1\|306885_307767_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
CP025570.1\|AZZ38618.1\|306048_306882_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
CP025570.1\|AZZ38631.1\|330587_331796_-\|type-I-U-CRISPR-associated-protein-Cas7	cas7	cd09738_cas7_CAS-I-U	gnl\|CDD\|378223
CP025570.1\|AZZ38633.1\|333044_333281_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225365
CP025570.1\|AZZ38626.1\|323495_323795_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP025570.1\|AZZ38617.1\|305170_306052_-\|fructoselysine-6-kinase	unknown	unknown	gnl\|CDD\|238915

Protein	Function_ID	Function_description	E-value
CP025570.1\|AZZ38627.1\|323791_325396_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	3.06009e-93
CP025570.1\|AZZ38621.1\|309114_310116_-\|SIS-domain-containing-protein	gnl\|CDD\|225132	COG2222, AgaS, Predicted phosphosugar isomerases [Cell envelope biogenesis, outer membrane].	4.35189e-66
CP025570.1\|AZZ40621.1\|315204_316452_-\|ISL3-family-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	7.0594e-73
CP025570.1\|AZZ38620.1\|307827_309102_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270452	cd14749, PBP2_XBP1_like, The periplasmic-binding component of ABC transport systems specific for xylo-oligosaccharides; possesses type 2 periplasmic binding fold. This group represents the periplasmic component of an ABC transport system XBP1 that shows preference for xylo-oligosaccharides in the order of xylotriose > xylobiose > xylotetraose. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	6.83157e-51
CP025570.1\|AZZ38629.1\|326377_329002_-\|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	3.47916e-82
CP025570.1\|AZZ38622.1\|310295_311288_-\|right-handed-parallel-beta-helix-repeat-containing-protein	gnl\|CDD\|379079	pfam13229, Beta_helix, Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.	5.90733e-05
CP025570.1\|AZZ38630.1\|328998_330585_-\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	gnl\|CDD\|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	6.68847e-77
CP025570.1\|AZZ38628.1\|325367_326381_-\|hypothetical-protein	gnl\|CDD\|187733	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; Might be a catalytically active RNA endoribonuclease.	2.25585e-83
CP025570.1\|AZZ40622.1\|320932_322180_+\|ISL3-family-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	7.0594e-73
CP025570.1\|AZZ40623.1\|333342_334347_+\|IS481-like-element-ISPfr15-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	2.38584e-19
CP025570.1\|AZZ38624.1\|312032_312683_+\|ATP:cob(I)alamin-adenosyltransferase	gnl\|CDD\|376665	pfam01923, Cob_adeno_trans, Cobalamin adenosyltransferase. Cobalamin adenosyltransferase This family contains the gene products of PduO and EutT which are both cobalamin adenosyltransferases. PduO is a protein with ATP:cob(I)alamin adenosyltransferase activity. The main role of this protein is the conversion of inactive cobalamins to AdoCbl for 1,2-propanediol degradation.The EutT enzyme appears to be an adenosyl transferase, converting CNB12 to AdoB12.	3.2261e-70
CP025570.1\|AZZ38623.1\|311188_311908_-\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	4.20493e-38
CP025570.1\|AZZ38619.1\|306885_307767_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	4.88971e-79
CP025570.1\|AZZ38618.1\|306048_306882_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	6.92708e-76
CP025570.1\|AZZ38631.1\|330587_331796_-\|type-I-U-CRISPR-associated-protein-Cas7	gnl\|CDD\|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	3.07457e-30
CP025570.1\|AZZ38633.1\|333044_333281_+\|hypothetical-protein	gnl\|CDD\|225365	COG2807, CynX, Cyanate permease [Inorganic ion transport and metabolism].	0.000305313
CP025570.1\|AZZ38626.1\|323495_323795_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.27463e-20
CP025570.1\|AZZ38617.1\|305170_306052_-\|fructoselysine-6-kinase	gnl\|CDD\|238915	cd01940, Fructoselysine_kinase_like, Fructoselysine kinase-like. Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown.	2.68745e-65

>CP025570.1|AZZ40621.1|315204_316452_-|ISL3-family-transposase
MTGVECDDGGRLRVTAESARQLVGCPTCGVVASSHGRRTVRLVDAPSFGRPVEVLWRKRTWECPEPSCPVGVFTEQDEQVAKPRAMLTVRACWWAVHQIRREHGSVSGVARQLGTAWKTVWGSIKPILQAAATDESRFVGVTTLGVDEHIWHHVSPVKRGPKELTGMVDLTRDKHGRTRARLLDLVPGRSGTVYNDWLKARGEPFRKRVKIATLDPFRGYKNAIDDQLADATAVLDAFHVVKLATQAVDEVRRRIQQDTLGHRGTRNDPLYKIRTILRCGAENLTERQQHRLAEAIAADERHEEVYVAWQCAQRVRDVYHAATPADGRALAEKVLTSFPHCPIPEIARLGRTLTQWADAFLGYFDTGGANNGGTEAVNGLIELHRRIARGFRNRENYRLRMLLIAGGLDQPPPQV
>CP025570.1|AZZ38625.1|312738_313050_+|hypothetical-protein
MSTTIPPDVEVAYKRLVERTESEEICAEALRSQNTRGMIETVAEQVVRARMELARAWADYLRICAEAGVDPTDVAPALHARSPMVRRLPHPAVGVPEAPGVGE
>CP025570.1|AZZ38624.1|312032_312683_+|ATP:cob(I)alamin-adenosyltransferase
MVTLSRIYTRTGDHGSTRLADGSTTTKTGPRVEAYGSVDAANTTIGLALALDDQILPERVHRVLRLIQNELFDVGSDLASPLVSRPRFEPVRMEQRSIDRLEAWCDEFGGPLPTLHSFILPGGNPVGAQLHVARTAVRSAERAAWRAVEAYGTEVVDSVETDDSGQGGVDELAITYLNRLSDLLFILARVANRADDPGEGNGDEVLWIPAGHRDEE
>CP025570.1|AZZ38623.1|311188_311908_-|DedA-family-protein
MRARVRLVWRQYAGRLITLTALDAERFFLLDSIVGQVVSLMEILGSLGIGLAILIETVFPPVPSEVILPLAGFASAQGDLNVFAAFGAATAGSLAGTYILYWLGAAIGAQRLRAIADRIWLVEAADVDRALAWFDRYGEASVLVGRLMPGVRSLVSIPAGVHRMGLGRFTALTLAGSAVWNAALIWLGAALGSNWRVVSHTIDQYSTWVYAALLLGAGGFFVMLVRRSVNRGARQESSH
>CP025570.1|AZZ38622.1|310295_311288_-|right-handed-parallel-beta-helix-repeat-containing-protein
MGVRGAAAGGRRILRHAGAPLGQPRGATGELPLTDDGPVDHEPVPDVARVRLALEAGGFVDLSRVPALRLTEPLRITRPTVIIGGDLTAPEGAAALEVTSSQVQIVGARIRGSATRGSTRDPGQILVHAHGCRESSVVGCTVDHVLYAGVMCLPCCQVLVADNEISDIPLTPGTVDGYGIAFSDAGNTEAARSRNCRAVRNTIRIVDREGIDTHGGLAIRITDNVIVGCARGIAVVSGNQTRRMSPQQCLVARNRIGAAGARTAPLEAVAFRGIEGTRPPGPSGTTWSTAIAGRTRSGRPPGHGPGAPSRVSAAWGSAGAEGRSSSADGP
>CP025570.1|AZZ38621.1|309114_310116_-|SIS-domain-containing-protein
MTDNAELLTTPSIEDQISEAIATIDSLDQLDNVFLVACGGSYALMVSLEHILQSSAAVEAHALNAREFTTRAPRTLGDHSLVISCSHSGNTPETVEATAAGKAAGAATICLTNLPGSPLDEAADSHVYYQHGDDKLYAYTGPALAYRLAYAIVDRINRTDTRAEVAEAASHLDHIVKTVQDDHYDAADKWAFKHARSELIYTLGSGPNYGETYAFAVCLLQEMQWIHSQGINSAEYFHGPFEITDFDVPFIETIGLGSSRAIDERAHAFVTTKSDDVLTLDAADWDLSEVPEHLRASYAHLVFNPLLRLHADRLADHRGHPLTVRRYMWRMEY
>CP025570.1|AZZ38620.1|307827_309102_-|sugar-ABC-transporter-substrate-binding-protein
MKRRTFLAGAASLAATGALSACGGFGGSSGGDDGGKTQLTLFHRWPNEPNKSYFTKLVKDFEAKYPNIAVKVDAVLNDTYKDKVRVTVGSANAPDVFFSFSGSFASSLVDTGNVMDLTDFTKTLSPTIIANQLEPFQVDGKQMGLPITMNGKVFFYNKKIFNQHGIQTPTTWEELLQACKTLKSAGVTPISYGSKEGWTVAHYVGTLNQRVLPAATILADADPKKGKFTDPGYVTALNFFKELFPYMTANPNAVDHQHARDAWLAGKTAMAYLETSEWSYITDKSFQWGTFDFPSVPDGKGDQKGLTGAPEGFMISAKTKHADEAKKFLGFMLSLDESVAWTNRSGYLSPVTGAVDKSNAPTGVKALGHEIAQASQMTPWLDDFLDQRLVSTYLAQGQSFIGGKITAEQVMAAVQKTAAQVRAS
>CP025570.1|AZZ38619.1|306885_307767_-|sugar-ABC-transporter-permease
MISRREKVITHLYLIPAAVFMLVFVFYPMFANIGFSFESFTLGAPSKKWVGLANYRQMFNDPIILTALKNNILYAIVSIVFQVAISHMLAATVLTVLPKRLATAARSFFFIPVLLSITVVGILFTFIYDSENGLLNSILQHVGLGSLAKPWLGDAGTAIYSVISVSQWQSVGYTMLLFIVSMQGINQDLYEAASLDGAGTLKQYLHVTLPQTREMIFVVMILTVSGAFTVFSEPYIMTNGGPGNASQTLATYLYNQGFFQNQMGYAAAISTLIMVITIILSVLQSFGFRTGKD
>CP025570.1|AZZ38618.1|306048_306882_-|carbohydrate-ABC-transporter-permease
MNTLKPSRAVAIPGRVILTLYALVLALPLLWMVISSLKANKDVYGKPFSLPSPWRFQNYADAWTMGISNYFVNSLLVTAFTTVIVLLCAAFASFAMVRLSNWAARLMLLAVMASLVVSPQIAIVPLYDLLGKANLLDTYWAMIFPYVGFRLPMAVLLIRAVFMEVPRELDEASRLDGCGSMGIFRHVYWPLSSGVLVTAGILTVYYTWNEFLFALIFMSTDSFRTIPAGLMAFRDALQTDYGVLLAGLVIAALPIVIVFLFCQRFFIEGITSGSVKS
>CP025570.1|AZZ38617.1|305170_306052_-|fructoselysine-6-kinase
MSTAQPRLVGIGDSVVDMFAERSTAYPGGNTLNVAVYWHLFADSPSDFIGVLGDDVYGDHVMATLGELGVGTTRVRRARGQTGRTLVDVAPDGDRVFVASNQGGIQADLSIRLAPADLELIRGASMVHTSVYSGMDHRLDALAQVAPVSYDFSDLPPIESVLPLMPHIQVAFLSAAQLSPEERRRYAQRCLQAGGTAVVMTAGAKGSVGFFDGKEHREGITHVDVVDALGAGDGFITGFLTAWVHSHDLTAAMQAGSRMGAMTCTLPGAFGHGVPASPADMAALKRRSAVGAT
>CP025570.1|AZZ40622.1|320932_322180_+|ISL3-family-transposase
MTGVECDDGGRLRVTAESARQLVGCPTCGVVASSHGRRTVRLVDAPSFGRPVEVLWRKRTWECPEPSCPVGVFTEQDEQVAKPRAMLTVRACWWAVHQIRREHGSVSGVARQLGTAWKTVWGSIKPILQAAATDESRFVGVTTLGVDEHIWHHVSPVKRGPKELTGMVDLTRDKHGRTRARLLDLVPGRSGTVYNDWLKARGEPFRKRVKIATLDPFRGYKNAIDDQLADATAVLDAFHVVKLATQAVDEVRRRIQQDTLGHRGTRNDPLYKIRTILRCGAENLTERQQHRLAEAIAADERHEEVYVAWQCAQRVRDVYHAATPADGRALAEKVLTSFPHCPIPEIARLGRTLTQWADAFLGYFDTGGANNGGTEAVNGLIELHRRIARGFRNRENYRLRMLLIAGGLDQPPPQV
>CP025570.1|AZZ38626.1|323495_323795_-|CRISPR-associated-endonuclease-Cas2
MRQDSHRFLIAYDVPDDKRRSHITVTLKRFGLRVQYSVFMVDCSPSHVLTLQRELEEIMNRDEDSVLVSDLGLSKTADDRAVTWLGHSRYIVGNGTMII
>CP025570.1|AZZ38627.1|323791_325396_-|CRISPR-associated-endonuclease-Cas1
MDTQEIIPISLISHTVFCQRRAWLEAQGEEVDSFAISAGTMAHKRVDDASESRPGTERAMLIHSDKLGLTGRCDVVQCDDEGCLDVIEYKSTPVRRRAEITEPQRIQVIAQAMCLEEMGYKVSETGVYFTNHHKQIPVDLDDASRSECRAWVDRTRQLIQADRAPEPLLDDPRCVGCSHATVCLPDENRFAEGQPARSISVSDPDGSILHITVPGARAALRQGRVKVSRSGEELASLPLEKVCGIVVHGNGDLSSALIREMLWRRLTVVWCSSRGRVVGWASSADSPNGQARVHQHVMSELGCLPVAQQMIRAKIGNQATLIRRNGNQVDQVADMRDLARAATSTVSLPELFALEGRAAQIYFSAFPSMFKSDEGQEFLAMWPGRHGRGATDPLNAALNFTYSLLLSDCIRALVACGLDPHAGFLHSSSRNKPALALDLMEEFRAPIADSVVVTCINTGVLKSVMFSHTLGDSRLTAQGRTALVSAYERRVTTEISHPTFGYTVSWRRSIEVQARILLGVVDGTRDEYKGMTIR
>CP025570.1|AZZ38628.1|325367_326381_-|hypothetical-protein
MNIMLAGGLNSALTHFALVGLAGILEEADCQRVRLGWTDEASAQPILTWEGDEASVIVQAHASRHAQGDSWVQAKGPNGKTGLFSPRIKPPETSSGWSALEDQREKALTSELTELDLLMITNLGEPGYWVIANKENQPDRAASRWEMKTRNRGEELVGNRLAPLAEVVANRSTTSIQDGLTGKTVTDTAGKGQPDSRTSTGLTPPGPADDALAWCGLWGISGFTVVPAVSRVSATAGASPLRALHTKNALIPIADHMLSFTAWRALMAESSVNELTSADDERRQAAANQLSHRGIAGACQFRVRKGGSSSAPERMILGGEFHPLEYFPHGHPGDNSD
>CP025570.1|AZZ38629.1|326377_329002_-|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3
MTLTISDFPRFFAGVNDGHRPFPWQMRLVSTVHSEGRWPAAITAPTGSGKSAVVEAHVFLTALAAVHAGPRLPRRLCVVVDRRALVDSQADRAARVLDWLESSSDPLATEMADALRGLTFGDDSRPMVLANLRGGIATDRRWIDDPSACAVISATPDMWGSRLLMHGYGTSKGARPRDAGLLGVDSVVVIDEAHLSRQLLGTARWVASFTDTSASAIGVPGLQVVESSATARVDDGGTAIGISDEDLNDPGLHPRMTRPKPVRLIESPDWNGKRATSKYVAQLTQEARSLRESTDGGTIGCIVNNVDTALKLADSLGDNCPCWVGPMRPMDLTAIKSEHPELFGLRADVGKPTTPYLVATQTVEVGIDVDFSGLLTELAPADSLAQRFGRVNRKGSREAGPITVVGPREHDIKDQLPYLAADLQAGRSWLRDLSDPNDASPWHIMSCPPAPKSPERAIVKLPHVGDVMRWEATSDTPLAEEELELWIRDSLRPDRLQAGLVMRAALPVDDAVAIPLLGATRPVDDEVFPVSVGVLRALADRILVGDEPHSRAFLYREDEVSALSRSDDDSVDIRNGDVVIIDTGHAVTRKGVVVLDATKPEPVATANGAKGTRVIIDGTPGEHWLTELCGLGDEEAQDAFTQAGETGVITRGPDLGENSDLPWIVVKPQAVVSDDDSIRQEWTSSEHLVTLDAHQDGVARCAESLAARIDLDSAISRLLYQAGLHHDDGKADPRFQKHRLNAPDGTLLAKSPARSAQWTSRRKWAGGLPQGWRHELRSVAVAWPAIEAASDPELVARLIGTSHGHGRVLPQLNAESLTGENDDRELKDRARELFVSGEWCSLMSRTSRRLGAWTCCYLEAVLRAADCRVSKEGS
>CP025570.1|AZZ38630.1|328998_330585_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6
MPALTVRAHFPLGVFQGHAEDGSPSRIPDTARLYSALINAAGNGTEAEFRKGQLRLSSESVAALSWLEHHPPTRIMIPDHVPAFGRAAITSYRDDGTAERLPKSRTGRIRKSSRTISTSTALSGAVGWLWDDAPTHVVETVGRLCSDVSCLGESDSPVVLTLEHIDATHEIVSEPSELHPRGVAVRTPGPGRLEELEKAWEAEHPAKLPTKTQDRPKLTEHPAGSRIPNSALQALQYERLAPSAPSSDPWTTALIMAVSEPFKPHEVVDWCVAAHRMLVARMGDSAPASVTGSYAKGVERPANRVAIQYIPASCLPRLPLAGNPESEFASGALAVLLPADLAPEDQLEITSALNAPNKRVWKRGADGSRQSVELRDAHLIGLHEFWPEVHPGWHRTWRSIGGLIPETRRQPDHPELGHWGFEQAALLSLAHVFRDHLECPPTRDYWAMIEAVSDVSRGGGSVLATHRIADSRITRYVHKAPKSMGVVQPYSATLDLGALVGDRTLIAIGQSRHLGGGLLVPVDSPEES
>CP025570.1|AZZ38631.1|330587_331796_-|type-I-U-CRISPR-associated-protein-Cas7
MDPLTFADVDSACRAGGATVLSSVTDLVPAAGSHAGIAPARYVTGNQGTYAYETRFIDDEAKSAVIVDSKASQLNRIEEAIALAIQEGDSALSRMPSIRVHYEGHSEYTSFDYQLPHRFTDGHIRFGTHEGKPVTEDPIYVNARNATTANATALLELSPVSLVLGSWDSTRRAHQARYRSCATGEIIGVLADQTENGRKPAPRGAARKDDLAPSVQLSEKDMLTLLKTQEDEMSSKTVEGIRKKAKAAKSGKTSASVLGLGSIPPSLDALGLVSCSTIIRSHVLSFSALRQIRFGSDNEANVACRSLLAALALHGIALADEELNLRANCDLREASGSRVALDGRRGTQREILPLTREVTGPLLGEAIDAATSKAGIHWDGQVFEVTGNPIILGGIETDADED
>CP025570.1|AZZ38632.1|332441_332939_-|hypothetical-protein
MSQEQAMRTYELTFIIDPIDDATIDRLAAEGIDWSKTGRLQFAHVDETSESCTDALRTALGNLQSLGVTASRLRLDLVSSSEIAARTGVSRPAVTKWTKQTSGSQAFPIEFDWSTTGPIWVWADVNDWLKTTGKTGYDEVCSPSLAEVEQANRWIADNASTFASI
>CP025570.1|AZZ38633.1|333044_333281_+|hypothetical-protein
MSHTDARGRRGDHTTQPAPDPQLRHAAWQAALPTIAFLLFVSLLRSPITAVPPLLGRMAGDLGMSSSCTSPGRCEQLS
>CP025570.1|AZZ40623.1|333342_334347_+|IS481-like-element-ISPfr15-family-transposase
MTHANAPLTPAGRLRLAACIVDDGWPLRRAAERFQVSPATAKRWADRYRAGQPLIDHSSRPAHSPNRLSRRTEHRIVGLRFTRRWGPHRIAYHLHIPRSTVGRVLERYHMPVLANTDQATGLPVRRPDPVRYEKQAPGDLIHVDIKKQGRIPDGGGWRAFGRGSVQDRTARAAGDRAARAGAPASRGYRYLHHAVDDHSRVAYSEICDDEKKETAAGFMTRALTFFESIGVAVKAVMTDNGACYRSRVFSQVLDDAKIGHKWTRPYRPQTNGKVERFNRSLAAEWAYARDYTSETEREAAYTEWLHHYNHHRPRTGIGGQTPSERVHNLTGKYI

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Crispr_ID: CP025570_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025570_2

322193-323308

Unclear

Consensus_repeat	Method
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	PILER-CR
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CRISPRCasFinder
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CRT

15 spacers

cas2,cas1,csb3,cas3,csb2gr5,cas7

The CRISPR arrays of CP025570_2

>merge|CP025570|2|322193-323308|PILER-CR,CRISPRCasFinder,CRT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACATCAGCAAGCCCCGCCTCAACAGCCTCATCCGCCGTGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCACGGCGGAACGCTAGTCGATCTGGTGTAAATTCCGAAGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCGGCGGACAGTGGGTGGAGGTTCAAGGGATGGCCTGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACAATTTACCACACCTCGACTAGCGTTCCGCCCTGATGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACTGGTTGCACACCCTACTACCGGGCTCGTTCCTACGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACGTAACCACGATTCTTGCTGCCGCGTCGCCGTCTCGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCTGCGAGGACCCACCACAAGCGGCGAGTAGCGGCAGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACTACAGGTCACAGGACCCGGTGATGTGTCCCAGCCCGGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACTTGTCGAGTGCTTCCATGGTCTGGCTGGCACTGCTCATCAGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACACGCCCGATATCGTGTCTGCGGAGTGTCCCCGGTGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACTTGCCGCACCACTGTGATAGTCGTCCTCTGGCACGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCAGGATGGCCGGCGCCGGCACCTGGGCCTCCTCGGCGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACGCGCGGCGACATTCCCGGAGACCTTGTCATCGACCACGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCGACGCGTCGGCAATCTGCCACAAAGTTTTACCCGAGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGACCATACACCCCCGCCCCAAACTTGATATTTACCATGGCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC

>CP025570|2|2|322193-323308|PILER-CR
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	ATCAGCAAGCCCCGCCTCAACAGCCTCATCCGCCGT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CACGGCGGAACGCTAGTCGATCTGGTGTAAATTCCGAA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CGGCGGACAGTGGGTGGAGGTTCAAGGGATGGCCTG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	AATTTACCACACCTCGACTAGCGTTCCGCCCTGAT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGGTTGCACACCCTACTACCGGGCTCGTTCCTAC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GTAACCACGATTCTTGCTGCCGCGTCGCCGTCTC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTGCGAGGACCCACCACAAGCGGCGAGTAGCGGCA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TACAGGTCACAGGACCCGGTGATGTGTCCCAGCCCGG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TTGTCGAGTGCTTCCATGGTCTGGCTGGCACTGCTCATCAG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	ACGCCCGATATCGTGTCTGCGGAGTGTCCCCGGT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TTGCCGCACCACTGTGATAGTCGTCCTCTGGCACG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CAGGATGGCCGGCGCCGGCACCTGGGCCTCCTCGGCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GCGCGGCGACATTCCCGGAGACCTTGTCATCGACCAC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CGACGCGTCGGCAATCTGCCACAAAGTTTTACCCGA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CATACACCCCCGCCCCAAACTTGATATTTACCATG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC

>CP025570|2|2|322193-323308|CRISPRCasFinder
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	ATCAGCAAGCCCCGCCTCAACAGCCTCATCCGCCGT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CACGGCGGAACGCTAGTCGATCTGGTGTAAATTCCGAA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CGGCGGACAGTGGGTGGAGGTTCAAGGGATGGCCTG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	AATTTACCACACCTCGACTAGCGTTCCGCCCTGAT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGGTTGCACACCCTACTACCGGGCTCGTTCCTAC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GTAACCACGATTCTTGCTGCCGCGTCGCCGTCTC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTGCGAGGACCCACCACAAGCGGCGAGTAGCGGCA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TACAGGTCACAGGACCCGGTGATGTGTCCCAGCCCGG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TTGTCGAGTGCTTCCATGGTCTGGCTGGCACTGCTCATCAG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	ACGCCCGATATCGTGTCTGCGGAGTGTCCCCGGT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TTGCCGCACCACTGTGATAGTCGTCCTCTGGCACG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CAGGATGGCCGGCGCCGGCACCTGGGCCTCCTCGGCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GCGCGGCGACATTCCCGGAGACCTTGTCATCGACCAC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CGACGCGTCGGCAATCTGCCACAAAGTTTTACCCGA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CATACACCCCCGCCCCAAACTTGATATTTACCATG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC

>CP025570|2|2|322193-323308|CRT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	ATCAGCAAGCCCCGCCTCAACAGCCTCATCCGCCGT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CACGGCGGAACGCTAGTCGATCTGGTGTAAATTCCGAA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CGGCGGACAGTGGGTGGAGGTTCAAGGGATGGCCTG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	AATTTACCACACCTCGACTAGCGTTCCGCCCTGAT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TGGTTGCACACCCTACTACCGGGCTCGTTCCTAC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GTAACCACGATTCTTGCTGCCGCGTCGCCGTCTC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CTGCGAGGACCCACCACAAGCGGCGAGTAGCGGCA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TACAGGTCACAGGACCCGGTGATGTGTCCCAGCCCGG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TTGTCGAGTGCTTCCATGGTCTGGCTGGCACTGCTCATCAG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	ACGCCCGATATCGTGTCTGCGGAGTGTCCCCGGT
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	TTGCCGCACCACTGTGATAGTCGTCCTCTGGCACG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CAGGATGGCCGGCGCCGGCACCTGGGCCTCCTCGGCG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	GCGCGGCGACATTCCCGGAGACCTTGTCATCGACCAC
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CGACGCGTCGGCAATCTGCCACAAAGTTTTACCCGA
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC	CATACACCCCCGCCCCAAACTTGATATTTACCATG
GCCTCAACGAAGGGCTCCTCTGGAAAGAGGAGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
CP025570.1\|AZZ38634.1\|334351_335464_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340897
CP025570.1\|AZZ38627.1\|323791_325396_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187766
CP025570.1\|AZZ38621.1\|309114_310116_-\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|225132
CP025570.1\|AZZ38632.1\|332441_332939_-\|hypothetical-protein	unknown	unknown	unknown
CP025570.1\|AZZ40621.1\|315204_316452_-\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|376574
CP025570.1\|AZZ38620.1\|307827_309102_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270452
CP025570.1\|AZZ38629.1\|326377_329002_-\|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09696_cas3_CAS-I-U	gnl\|CDD\|274235
CP025570.1\|AZZ38630.1\|328998_330585_-\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl\|CDD\|274005
CP025570.1\|AZZ38622.1\|310295_311288_-\|right-handed-parallel-beta-helix-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379079
CP025570.1\|AZZ38625.1\|312738_313050_+\|hypothetical-protein	unknown	unknown	unknown
CP025570.1\|AZZ38628.1\|325367_326381_-\|hypothetical-protein	csb3	cd09764_csb3_CAS-I-U	gnl\|CDD\|187733
CP025570.1\|AZZ40622.1\|320932_322180_+\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|376574
CP025570.1\|AZZ40623.1\|333342_334347_+\|IS481-like-element-ISPfr15-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025570.1\|AZZ38624.1\|312032_312683_+\|ATP:cob(I)alamin-adenosyltransferase	unknown	unknown	gnl\|CDD\|376665
CP025570.1\|AZZ38623.1\|311188_311908_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
CP025570.1\|AZZ38619.1\|306885_307767_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
CP025570.1\|AZZ38631.1\|330587_331796_-\|type-I-U-CRISPR-associated-protein-Cas7	cas7	cd09738_cas7_CAS-I-U	gnl\|CDD\|378223
CP025570.1\|AZZ38633.1\|333044_333281_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225365
CP025570.1\|AZZ38626.1\|323495_323795_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP025570.1\|AZZ38618.1\|306048_306882_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472

Protein	Function_ID	Function_description	E-value
CP025570.1\|AZZ38634.1\|334351_335464_+\|MFS-transporter	gnl\|CDD\|340897	cd17339, MFS_NIMT_CynX_like, 2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Escherichia coli 2-nitroimidazole transporter (NIMT) and cyanate transport protein CynX, and similar proteins. NIMT, also called YeaN, confers resistance to 2-nitroimidazole, the antibacterial and antifungal antibiotic, by mediating the active efflux of this compound. CynX is part of an active transport system that transports exogenous cyanate into E. coli cells. The NIMT/CynX-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.07872e-63
CP025570.1\|AZZ38627.1\|323791_325396_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	3.06009e-93
CP025570.1\|AZZ38621.1\|309114_310116_-\|SIS-domain-containing-protein	gnl\|CDD\|225132	COG2222, AgaS, Predicted phosphosugar isomerases [Cell envelope biogenesis, outer membrane].	4.35189e-66
CP025570.1\|AZZ40621.1\|315204_316452_-\|ISL3-family-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	7.0594e-73
CP025570.1\|AZZ38620.1\|307827_309102_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270452	cd14749, PBP2_XBP1_like, The periplasmic-binding component of ABC transport systems specific for xylo-oligosaccharides; possesses type 2 periplasmic binding fold. This group represents the periplasmic component of an ABC transport system XBP1 that shows preference for xylo-oligosaccharides in the order of xylotriose > xylobiose > xylotetraose. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	6.83157e-51
CP025570.1\|AZZ38629.1\|326377_329002_-\|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	3.47916e-82
CP025570.1\|AZZ38622.1\|310295_311288_-\|right-handed-parallel-beta-helix-repeat-containing-protein	gnl\|CDD\|379079	pfam13229, Beta_helix, Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.	5.90733e-05
CP025570.1\|AZZ38630.1\|328998_330585_-\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	gnl\|CDD\|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	6.68847e-77
CP025570.1\|AZZ38628.1\|325367_326381_-\|hypothetical-protein	gnl\|CDD\|187733	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; Might be a catalytically active RNA endoribonuclease.	2.25585e-83
CP025570.1\|AZZ40622.1\|320932_322180_+\|ISL3-family-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	7.0594e-73
CP025570.1\|AZZ40623.1\|333342_334347_+\|IS481-like-element-ISPfr15-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	2.38584e-19
CP025570.1\|AZZ38624.1\|312032_312683_+\|ATP:cob(I)alamin-adenosyltransferase	gnl\|CDD\|376665	pfam01923, Cob_adeno_trans, Cobalamin adenosyltransferase. Cobalamin adenosyltransferase This family contains the gene products of PduO and EutT which are both cobalamin adenosyltransferases. PduO is a protein with ATP:cob(I)alamin adenosyltransferase activity. The main role of this protein is the conversion of inactive cobalamins to AdoCbl for 1,2-propanediol degradation.The EutT enzyme appears to be an adenosyl transferase, converting CNB12 to AdoB12.	3.2261e-70
CP025570.1\|AZZ38623.1\|311188_311908_-\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	4.20493e-38
CP025570.1\|AZZ38619.1\|306885_307767_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	4.88971e-79
CP025570.1\|AZZ38631.1\|330587_331796_-\|type-I-U-CRISPR-associated-protein-Cas7	gnl\|CDD\|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	3.07457e-30
CP025570.1\|AZZ38633.1\|333044_333281_+\|hypothetical-protein	gnl\|CDD\|225365	COG2807, CynX, Cyanate permease [Inorganic ion transport and metabolism].	0.000305313
CP025570.1\|AZZ38626.1\|323495_323795_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.27463e-20
CP025570.1\|AZZ38618.1\|306048_306882_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	6.92708e-76

>CP025570.1|AZZ40622.1|320932_322180_+|ISL3-family-transposase
MTGVECDDGGRLRVTAESARQLVGCPTCGVVASSHGRRTVRLVDAPSFGRPVEVLWRKRTWECPEPSCPVGVFTEQDEQVAKPRAMLTVRACWWAVHQIRREHGSVSGVARQLGTAWKTVWGSIKPILQAAATDESRFVGVTTLGVDEHIWHHVSPVKRGPKELTGMVDLTRDKHGRTRARLLDLVPGRSGTVYNDWLKARGEPFRKRVKIATLDPFRGYKNAIDDQLADATAVLDAFHVVKLATQAVDEVRRRIQQDTLGHRGTRNDPLYKIRTILRCGAENLTERQQHRLAEAIAADERHEEVYVAWQCAQRVRDVYHAATPADGRALAEKVLTSFPHCPIPEIARLGRTLTQWADAFLGYFDTGGANNGGTEAVNGLIELHRRIARGFRNRENYRLRMLLIAGGLDQPPPQV
>CP025570.1|AZZ40621.1|315204_316452_-|ISL3-family-transposase
MTGVECDDGGRLRVTAESARQLVGCPTCGVVASSHGRRTVRLVDAPSFGRPVEVLWRKRTWECPEPSCPVGVFTEQDEQVAKPRAMLTVRACWWAVHQIRREHGSVSGVARQLGTAWKTVWGSIKPILQAAATDESRFVGVTTLGVDEHIWHHVSPVKRGPKELTGMVDLTRDKHGRTRARLLDLVPGRSGTVYNDWLKARGEPFRKRVKIATLDPFRGYKNAIDDQLADATAVLDAFHVVKLATQAVDEVRRRIQQDTLGHRGTRNDPLYKIRTILRCGAENLTERQQHRLAEAIAADERHEEVYVAWQCAQRVRDVYHAATPADGRALAEKVLTSFPHCPIPEIARLGRTLTQWADAFLGYFDTGGANNGGTEAVNGLIELHRRIARGFRNRENYRLRMLLIAGGLDQPPPQV
>CP025570.1|AZZ38625.1|312738_313050_+|hypothetical-protein
MSTTIPPDVEVAYKRLVERTESEEICAEALRSQNTRGMIETVAEQVVRARMELARAWADYLRICAEAGVDPTDVAPALHARSPMVRRLPHPAVGVPEAPGVGE
>CP025570.1|AZZ38624.1|312032_312683_+|ATP:cob(I)alamin-adenosyltransferase
MVTLSRIYTRTGDHGSTRLADGSTTTKTGPRVEAYGSVDAANTTIGLALALDDQILPERVHRVLRLIQNELFDVGSDLASPLVSRPRFEPVRMEQRSIDRLEAWCDEFGGPLPTLHSFILPGGNPVGAQLHVARTAVRSAERAAWRAVEAYGTEVVDSVETDDSGQGGVDELAITYLNRLSDLLFILARVANRADDPGEGNGDEVLWIPAGHRDEE
>CP025570.1|AZZ38623.1|311188_311908_-|DedA-family-protein
MRARVRLVWRQYAGRLITLTALDAERFFLLDSIVGQVVSLMEILGSLGIGLAILIETVFPPVPSEVILPLAGFASAQGDLNVFAAFGAATAGSLAGTYILYWLGAAIGAQRLRAIADRIWLVEAADVDRALAWFDRYGEASVLVGRLMPGVRSLVSIPAGVHRMGLGRFTALTLAGSAVWNAALIWLGAALGSNWRVVSHTIDQYSTWVYAALLLGAGGFFVMLVRRSVNRGARQESSH
>CP025570.1|AZZ38622.1|310295_311288_-|right-handed-parallel-beta-helix-repeat-containing-protein
MGVRGAAAGGRRILRHAGAPLGQPRGATGELPLTDDGPVDHEPVPDVARVRLALEAGGFVDLSRVPALRLTEPLRITRPTVIIGGDLTAPEGAAALEVTSSQVQIVGARIRGSATRGSTRDPGQILVHAHGCRESSVVGCTVDHVLYAGVMCLPCCQVLVADNEISDIPLTPGTVDGYGIAFSDAGNTEAARSRNCRAVRNTIRIVDREGIDTHGGLAIRITDNVIVGCARGIAVVSGNQTRRMSPQQCLVARNRIGAAGARTAPLEAVAFRGIEGTRPPGPSGTTWSTAIAGRTRSGRPPGHGPGAPSRVSAAWGSAGAEGRSSSADGP
>CP025570.1|AZZ38621.1|309114_310116_-|SIS-domain-containing-protein
MTDNAELLTTPSIEDQISEAIATIDSLDQLDNVFLVACGGSYALMVSLEHILQSSAAVEAHALNAREFTTRAPRTLGDHSLVISCSHSGNTPETVEATAAGKAAGAATICLTNLPGSPLDEAADSHVYYQHGDDKLYAYTGPALAYRLAYAIVDRINRTDTRAEVAEAASHLDHIVKTVQDDHYDAADKWAFKHARSELIYTLGSGPNYGETYAFAVCLLQEMQWIHSQGINSAEYFHGPFEITDFDVPFIETIGLGSSRAIDERAHAFVTTKSDDVLTLDAADWDLSEVPEHLRASYAHLVFNPLLRLHADRLADHRGHPLTVRRYMWRMEY
>CP025570.1|AZZ38620.1|307827_309102_-|sugar-ABC-transporter-substrate-binding-protein
MKRRTFLAGAASLAATGALSACGGFGGSSGGDDGGKTQLTLFHRWPNEPNKSYFTKLVKDFEAKYPNIAVKVDAVLNDTYKDKVRVTVGSANAPDVFFSFSGSFASSLVDTGNVMDLTDFTKTLSPTIIANQLEPFQVDGKQMGLPITMNGKVFFYNKKIFNQHGIQTPTTWEELLQACKTLKSAGVTPISYGSKEGWTVAHYVGTLNQRVLPAATILADADPKKGKFTDPGYVTALNFFKELFPYMTANPNAVDHQHARDAWLAGKTAMAYLETSEWSYITDKSFQWGTFDFPSVPDGKGDQKGLTGAPEGFMISAKTKHADEAKKFLGFMLSLDESVAWTNRSGYLSPVTGAVDKSNAPTGVKALGHEIAQASQMTPWLDDFLDQRLVSTYLAQGQSFIGGKITAEQVMAAVQKTAAQVRAS
>CP025570.1|AZZ38619.1|306885_307767_-|sugar-ABC-transporter-permease
MISRREKVITHLYLIPAAVFMLVFVFYPMFANIGFSFESFTLGAPSKKWVGLANYRQMFNDPIILTALKNNILYAIVSIVFQVAISHMLAATVLTVLPKRLATAARSFFFIPVLLSITVVGILFTFIYDSENGLLNSILQHVGLGSLAKPWLGDAGTAIYSVISVSQWQSVGYTMLLFIVSMQGINQDLYEAASLDGAGTLKQYLHVTLPQTREMIFVVMILTVSGAFTVFSEPYIMTNGGPGNASQTLATYLYNQGFFQNQMGYAAAISTLIMVITIILSVLQSFGFRTGKD
>CP025570.1|AZZ38618.1|306048_306882_-|carbohydrate-ABC-transporter-permease
MNTLKPSRAVAIPGRVILTLYALVLALPLLWMVISSLKANKDVYGKPFSLPSPWRFQNYADAWTMGISNYFVNSLLVTAFTTVIVLLCAAFASFAMVRLSNWAARLMLLAVMASLVVSPQIAIVPLYDLLGKANLLDTYWAMIFPYVGFRLPMAVLLIRAVFMEVPRELDEASRLDGCGSMGIFRHVYWPLSSGVLVTAGILTVYYTWNEFLFALIFMSTDSFRTIPAGLMAFRDALQTDYGVLLAGLVIAALPIVIVFLFCQRFFIEGITSGSVKS
>CP025570.1|AZZ38626.1|323495_323795_-|CRISPR-associated-endonuclease-Cas2
MRQDSHRFLIAYDVPDDKRRSHITVTLKRFGLRVQYSVFMVDCSPSHVLTLQRELEEIMNRDEDSVLVSDLGLSKTADDRAVTWLGHSRYIVGNGTMII
>CP025570.1|AZZ38627.1|323791_325396_-|CRISPR-associated-endonuclease-Cas1
MDTQEIIPISLISHTVFCQRRAWLEAQGEEVDSFAISAGTMAHKRVDDASESRPGTERAMLIHSDKLGLTGRCDVVQCDDEGCLDVIEYKSTPVRRRAEITEPQRIQVIAQAMCLEEMGYKVSETGVYFTNHHKQIPVDLDDASRSECRAWVDRTRQLIQADRAPEPLLDDPRCVGCSHATVCLPDENRFAEGQPARSISVSDPDGSILHITVPGARAALRQGRVKVSRSGEELASLPLEKVCGIVVHGNGDLSSALIREMLWRRLTVVWCSSRGRVVGWASSADSPNGQARVHQHVMSELGCLPVAQQMIRAKIGNQATLIRRNGNQVDQVADMRDLARAATSTVSLPELFALEGRAAQIYFSAFPSMFKSDEGQEFLAMWPGRHGRGATDPLNAALNFTYSLLLSDCIRALVACGLDPHAGFLHSSSRNKPALALDLMEEFRAPIADSVVVTCINTGVLKSVMFSHTLGDSRLTAQGRTALVSAYERRVTTEISHPTFGYTVSWRRSIEVQARILLGVVDGTRDEYKGMTIR
>CP025570.1|AZZ38628.1|325367_326381_-|hypothetical-protein
MNIMLAGGLNSALTHFALVGLAGILEEADCQRVRLGWTDEASAQPILTWEGDEASVIVQAHASRHAQGDSWVQAKGPNGKTGLFSPRIKPPETSSGWSALEDQREKALTSELTELDLLMITNLGEPGYWVIANKENQPDRAASRWEMKTRNRGEELVGNRLAPLAEVVANRSTTSIQDGLTGKTVTDTAGKGQPDSRTSTGLTPPGPADDALAWCGLWGISGFTVVPAVSRVSATAGASPLRALHTKNALIPIADHMLSFTAWRALMAESSVNELTSADDERRQAAANQLSHRGIAGACQFRVRKGGSSSAPERMILGGEFHPLEYFPHGHPGDNSD
>CP025570.1|AZZ38629.1|326377_329002_-|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3
MTLTISDFPRFFAGVNDGHRPFPWQMRLVSTVHSEGRWPAAITAPTGSGKSAVVEAHVFLTALAAVHAGPRLPRRLCVVVDRRALVDSQADRAARVLDWLESSSDPLATEMADALRGLTFGDDSRPMVLANLRGGIATDRRWIDDPSACAVISATPDMWGSRLLMHGYGTSKGARPRDAGLLGVDSVVVIDEAHLSRQLLGTARWVASFTDTSASAIGVPGLQVVESSATARVDDGGTAIGISDEDLNDPGLHPRMTRPKPVRLIESPDWNGKRATSKYVAQLTQEARSLRESTDGGTIGCIVNNVDTALKLADSLGDNCPCWVGPMRPMDLTAIKSEHPELFGLRADVGKPTTPYLVATQTVEVGIDVDFSGLLTELAPADSLAQRFGRVNRKGSREAGPITVVGPREHDIKDQLPYLAADLQAGRSWLRDLSDPNDASPWHIMSCPPAPKSPERAIVKLPHVGDVMRWEATSDTPLAEEELELWIRDSLRPDRLQAGLVMRAALPVDDAVAIPLLGATRPVDDEVFPVSVGVLRALADRILVGDEPHSRAFLYREDEVSALSRSDDDSVDIRNGDVVIIDTGHAVTRKGVVVLDATKPEPVATANGAKGTRVIIDGTPGEHWLTELCGLGDEEAQDAFTQAGETGVITRGPDLGENSDLPWIVVKPQAVVSDDDSIRQEWTSSEHLVTLDAHQDGVARCAESLAARIDLDSAISRLLYQAGLHHDDGKADPRFQKHRLNAPDGTLLAKSPARSAQWTSRRKWAGGLPQGWRHELRSVAVAWPAIEAASDPELVARLIGTSHGHGRVLPQLNAESLTGENDDRELKDRARELFVSGEWCSLMSRTSRRLGAWTCCYLEAVLRAADCRVSKEGS
>CP025570.1|AZZ38630.1|328998_330585_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6
MPALTVRAHFPLGVFQGHAEDGSPSRIPDTARLYSALINAAGNGTEAEFRKGQLRLSSESVAALSWLEHHPPTRIMIPDHVPAFGRAAITSYRDDGTAERLPKSRTGRIRKSSRTISTSTALSGAVGWLWDDAPTHVVETVGRLCSDVSCLGESDSPVVLTLEHIDATHEIVSEPSELHPRGVAVRTPGPGRLEELEKAWEAEHPAKLPTKTQDRPKLTEHPAGSRIPNSALQALQYERLAPSAPSSDPWTTALIMAVSEPFKPHEVVDWCVAAHRMLVARMGDSAPASVTGSYAKGVERPANRVAIQYIPASCLPRLPLAGNPESEFASGALAVLLPADLAPEDQLEITSALNAPNKRVWKRGADGSRQSVELRDAHLIGLHEFWPEVHPGWHRTWRSIGGLIPETRRQPDHPELGHWGFEQAALLSLAHVFRDHLECPPTRDYWAMIEAVSDVSRGGGSVLATHRIADSRITRYVHKAPKSMGVVQPYSATLDLGALVGDRTLIAIGQSRHLGGGLLVPVDSPEES
>CP025570.1|AZZ38631.1|330587_331796_-|type-I-U-CRISPR-associated-protein-Cas7
MDPLTFADVDSACRAGGATVLSSVTDLVPAAGSHAGIAPARYVTGNQGTYAYETRFIDDEAKSAVIVDSKASQLNRIEEAIALAIQEGDSALSRMPSIRVHYEGHSEYTSFDYQLPHRFTDGHIRFGTHEGKPVTEDPIYVNARNATTANATALLELSPVSLVLGSWDSTRRAHQARYRSCATGEIIGVLADQTENGRKPAPRGAARKDDLAPSVQLSEKDMLTLLKTQEDEMSSKTVEGIRKKAKAAKSGKTSASVLGLGSIPPSLDALGLVSCSTIIRSHVLSFSALRQIRFGSDNEANVACRSLLAALALHGIALADEELNLRANCDLREASGSRVALDGRRGTQREILPLTREVTGPLLGEAIDAATSKAGIHWDGQVFEVTGNPIILGGIETDADED
>CP025570.1|AZZ38632.1|332441_332939_-|hypothetical-protein
MSQEQAMRTYELTFIIDPIDDATIDRLAAEGIDWSKTGRLQFAHVDETSESCTDALRTALGNLQSLGVTASRLRLDLVSSSEIAARTGVSRPAVTKWTKQTSGSQAFPIEFDWSTTGPIWVWADVNDWLKTTGKTGYDEVCSPSLAEVEQANRWIADNASTFASI
>CP025570.1|AZZ38633.1|333044_333281_+|hypothetical-protein
MSHTDARGRRGDHTTQPAPDPQLRHAAWQAALPTIAFLLFVSLLRSPITAVPPLLGRMAGDLGMSSSCTSPGRCEQLS
>CP025570.1|AZZ40623.1|333342_334347_+|IS481-like-element-ISPfr15-family-transposase
MTHANAPLTPAGRLRLAACIVDDGWPLRRAAERFQVSPATAKRWADRYRAGQPLIDHSSRPAHSPNRLSRRTEHRIVGLRFTRRWGPHRIAYHLHIPRSTVGRVLERYHMPVLANTDQATGLPVRRPDPVRYEKQAPGDLIHVDIKKQGRIPDGGGWRAFGRGSVQDRTARAAGDRAARAGAPASRGYRYLHHAVDDHSRVAYSEICDDEKKETAAGFMTRALTFFESIGVAVKAVMTDNGACYRSRVFSQVLDDAKIGHKWTRPYRPQTNGKVERFNRSLAAEWAYARDYTSETEREAAYTEWLHHYNHHRPRTGIGGQTPSERVHNLTGKYI
>CP025570.1|AZZ38634.1|334351_335464_+|MFS-transporter
MGALTSVPVLCFGALTPIASLVLRRLDLNASVLWALAIIMAGSVLRSAGSVWAAFAGTAVIAAGMTLGNLIVPMVIARSFRNRTALMTSSYSASVNIAVTLSTALAAPLALLIGWQGSTAAWALAPGVIAGFVWWKVFPPQRRRDRDAVSPDTGAAGRSGENARRKPSVSIVAWPLAWIMAAAFAAHNLAYYSTVTWLPTALREVARLGESGAGLASSVFQITAVAGPLMVPLALNRMGWSMRRVMIIVCACWLALPFGMMTLPSLWLVWCILGGIAQGAFFSALFTIVIQRSRTPDESRRLTALIQTTGYIVASLGPILVGHVHDQFGGWTLPFAVIGAATVILTVCAMIAVGDTSRPAVSPADRPTEV

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Crispr_ID: CP025570_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025570_3

512373-512467

Orphan

Consensus_repeat	Method
GTCGCGGCTGGTGGCCAGGGGCTGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025570_3

>merge|CP025570|3|512373-512467|CRISPRCasFinder
GTCGCGGCTGGTGGCCAGGGGCTGAAGGTGCCCTACGTGGTGGTCTCGCGGGTGGCAGCAGAGCTGGTCGGTCGCGGCTGGTGGCCAGGGGCTGA

>CP025570|3|3|512373-512467|CRISPRCasFinder
GTCGCGGCTGGTGGCCAGGGGCTGA	AGGTGCCCTACGTGGTGGTCTCGCGGGTGGCAGCAGAGCTGGTCG
GTCGCGGCTGGTGGCCAGGGGCTGA

Protein	Signature genes	Signature genes Name	Protein_function
CP025570.1\|AZZ38757.1\|501835_503254_+\|mycothione-reductase	unknown	unknown	gnl\|CDD\|181142
CP025570.1\|AZZ38770.1\|516735_517779_-\|phosphate-ABC-transporter-permease-subunit-PstC	unknown	unknown	gnl\|CDD\|273992
CP025570.1\|AZZ38759.1\|504253_505156_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
CP025570.1\|AZZ38768.1\|514896_515673_-\|phosphate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|184587
CP025570.1\|AZZ40649.1\|517913_519071_-\|phosphate-ABC-transporter-substrate-binding-protein-PstS	unknown	unknown	gnl\|CDD\|273374
CP025570.1\|AZZ40646.1\|497133_498651_-\|threonine-ammonia-lyase,-biosynthetic	unknown	unknown	gnl\|CDD\|236417
CP025570.1\|AZZ38755.1\|495307_497191_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|129911
CP025570.1\|AZZ38760.1\|506186_507263_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
CP025570.1\|AZZ40647.1\|505152_506097_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|227119
CP025570.1\|AZZ38769.1\|515719_516739_-\|phosphate-ABC-transporter,-permease-protein-PstA	unknown	unknown	gnl\|CDD\|223654
CP025570.1\|AZZ38758.1\|503294_504257_-\|siderophore-interacting-protein	unknown	unknown	gnl\|CDD\|99790
CP025570.1\|AZZ38767.1\|514197_514434_-\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
CP025570.1\|AZZ38766.1\|513474_513720_+\|type-B-50S-ribosomal-protein-L31	unknown	unknown	gnl\|CDD\|234969
CP025570.1\|AZZ38756.1\|500953_501688_-\|DUF5134-domain-containing-protein	unknown	unknown	unknown
CP025570.1\|AZZ38763.1\|512540_512711_-\|50S-ribosomal-protein-L32	unknown	unknown	gnl\|CDD\|234901
CP025570.1\|AZZ38771.1\|519300_520212_-\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|239645
CP025570.1\|AZZ40648.1\|507259_508306_-\|iron-siderophore-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238566
CP025570.1\|AZZ38761.1\|508669_510661_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
CP025570.1\|AZZ38764.1\|512715_513021_-\|30S-ribosomal-protein-S14	unknown	unknown	gnl\|CDD\|181574
CP025570.1\|AZZ38765.1\|513020_513191_-\|50S-ribosomal-protein-L33	unknown	unknown	gnl\|CDD\|179075

Protein	Function_ID	Function_description	E-value
CP025570.1\|AZZ38757.1\|501835_503254_+\|mycothione-reductase	gnl\|CDD\|181142	PRK07846, PRK07846, mycothione reductase; Reviewed.	0
CP025570.1\|AZZ38770.1\|516735_517779_-\|phosphate-ABC-transporter-permease-subunit-PstC	gnl\|CDD\|273992	TIGR02138, phosphate_transport_system_permease_protein_PstC, phosphate ABC transporter, permease protein PstC. The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions].	5.08169e-81
CP025570.1\|AZZ38759.1\|504253_505156_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	4.27126e-126
CP025570.1\|AZZ38768.1\|514896_515673_-\|phosphate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|184587	PRK14241, PRK14241, phosphate transporter ATP-binding protein; Provisional.	0
CP025570.1\|AZZ40649.1\|517913_519071_-\|phosphate-ABC-transporter-substrate-binding-protein-PstS	gnl\|CDD\|273374	TIGR00975, precursor_PBP-3_PstS-3_Antigen_Ag88., phosphate ABC transporter, phosphate-binding protein. This family represents one type of (periplasmic, in Gram-negative bacteria) phosphate-binding protein found in phosphate ABC (ATP-binding cassette) transporters. This protein is accompanied, generally in the same operon, by an ATP binding protein and (usually) two permease proteins. [Transport and binding proteins, Anions].	2.05884e-73
CP025570.1\|AZZ40646.1\|497133_498651_-\|threonine-ammonia-lyase,-biosynthetic	gnl\|CDD\|236417	PRK09224, PRK09224, threonine ammonia-lyase IlvA.	0
CP025570.1\|AZZ38755.1\|495307_497191_-\|hypothetical-protein	gnl\|CDD\|129911	TIGR00831, Putative_Na+/H+_exchanger_Rv2287/MT2345/Mb2309., Na+/H+ antiporter, bacterial form. The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC 2.A.36) The CPA1 family is a large family of proteins derived from Gram-positive and Gram-negative bacteria, blue green bacteria, yeast, plants and animals. Transporters from eukaryotes have been functionally characterized, and all of these catalyze Na+:H+ exchange. Their primary physiological functions may be in (1) cytoplasmic pH regulation, extruding the H+ generated during metabolism, and (2) salt tolerance (in plants), due to Na+ uptake into vacuoles. This model is specific for the bacterial members of this family. [Transport and binding proteins, Cations and iron carrying compounds].	1.87471e-57
CP025570.1\|AZZ38760.1\|506186_507263_-\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	3.02345e-81
CP025570.1\|AZZ40647.1\|505152_506097_-\|ABC-transporter-permease	gnl\|CDD\|227119	COG4779, FepG, ABC-type enterobactin transport system, permease component [Inorganic ion transport and metabolism].	1.19027e-61
CP025570.1\|AZZ38769.1\|515719_516739_-\|phosphate-ABC-transporter,-permease-protein-PstA	gnl\|CDD\|223654	COG0581, PstA, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].	9.68274e-82
CP025570.1\|AZZ38758.1\|503294_504257_-\|siderophore-interacting-protein	gnl\|CDD\|99790	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family. Siderophores are produced in various bacteria (and some plants) to extract iron from hosts. Binding constants are high, so iron can be pilfered from transferrin and lactoferrin for bacterial uptake, contributing to pathogen virulence. Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I. FNR transfers electrons from reduced ferredoxin to FAD (forming FADH2 via a semiquinone intermediate) and then transfers a hydride ion to convert NADP+ to NADPH. FNR has since been shown to utilize a variety of electron acceptors and donors and has a variety of physiological functions including nitrogen assimilation, dinitrogen fixation, steroid hydroxylation, fatty acid metabolism, oxygenase activity, and methane assimilation in a variety of organisms. FNR has an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) flavin sub-domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal moeity may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Because flavins such as FAD can exist in oxidized, semiquinone (one-electron reduced), or fully reduced hydroquinone forms, FNR can interact with one and two electron carriers. FNR has a strong preference for NADP(H) vs NAD(H).	1.31618e-66
CP025570.1\|AZZ38767.1\|514197_514434_-\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	5.055e-29
CP025570.1\|AZZ38766.1\|513474_513720_+\|type-B-50S-ribosomal-protein-L31	gnl\|CDD\|234969	PRK01678, rpmE2, type B 50S ribosomal protein L31.	5.92816e-53
CP025570.1\|AZZ38765.1\|513020_513191_-\|50S-ribosomal-protein-L33	gnl\|CDD\|179075	PRK00595, rpmG, 50S ribosomal protein L33; Validated.	8.05534e-18
CP025570.1\|AZZ38763.1\|512540_512711_-\|50S-ribosomal-protein-L32	gnl\|CDD\|234901	PRK01110, rpmF, 50S ribosomal protein L32; Validated.	5.03341e-12
CP025570.1\|AZZ38771.1\|519300_520212_-\|NUDIX-hydrolase	gnl\|CDD\|239645	cd03673, Ap6A_hydrolase, Diadenosine hexaphosphate (Ap6A) hydrolase is a member of the Nudix hydrolase superfamily. Ap6A hydrolase specifically hydrolyzes diadenosine polyphosphates, but not ATP or diadenosine triphosphate, and it generates ATP as the product. Ap6A, the most preferred substrate, hydrolyzes to produce two ATP molecules, which is a novel hydrolysis mode for Ap6A. These results indicate that Ap6A hydrolase is a diadenosine polyphosphate hydrolase. It requires the presence of a divalent cation, such as Mn2+, Mg2+, Zn2+, and Co2+, for activity. Members of the Nudix superfamily are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site.	1.85853e-40
CP025570.1\|AZZ40648.1\|507259_508306_-\|iron-siderophore-ABC-transporter-substrate-binding-protein	gnl\|CDD\|238566	cd01146, FhuD, Fe3+-siderophore binding domain FhuD. These proteins have been shown to function as initial receptors in ABC transport of Fe3+-siderophores in many eubacterial species. They belong to the TroA-like superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA-like protein is comprised of two globular subdomains connected by a long alpha helix and binds its specific ligands in the cleft between these domains.	9.21507e-48
CP025570.1\|AZZ38761.1\|508669_510661_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.70588e-91
CP025570.1\|AZZ38764.1\|512715_513021_-\|30S-ribosomal-protein-S14	gnl\|CDD\|181574	PRK08881, rpsN, 30S ribosomal protein S14; Reviewed.	6.14976e-48

>CP025570.1|AZZ38761.1|508669_510661_+|ABC-transporter-ATP-binding-protein
MSTPMRPGVAVPGDGHGSGHPQASGYLQASGHPHGGGAHVAGGSHPAGHPGSAPSAGHPGGPPGPRGPGRIIRAATPRWVIACSIALSWIAAAATSMLLALLGEGVDRVAAGGRMPQRGVLECAVLAVIAGAGVGVGQWLSQWAASSTERRLRQAVMSRVLQTEPTGTRRRTGALLSMATTSVERTAHYRAGFLGPIVGSITTPLLVLTVMAVTISVGIALRLAALIVLVPLAIGGFRRLVRPVGAAYRRSQARLTAAFLEALQGLDTLVYARAAGRTAARLAHRGEQHRRSLMRLLAGNQLLILVVDAAFSLTVVVAGGVLAVARVFSGQLSVGQGIAVVLMTILVIGPVDVVGQFFYIGVVGRAHQAILRRHLETGGPASRGGTATGASPRVPTSAGTSPRDSTAAGRSPRDSTAAGDRSRKAPATGGSLRAPTAETTSPDPRRPALELDDVSASWTPGRPVLTGVSIRVDPGETVALVGPSGIGKSTLSALVQGHLTPASGTVRVDGMDTRTTDPRELRSRLAVVEQRPFLFLGTIADNLRMAAPKASEADLWAALGVAGLAEEVGAMPLGLQTPVGERGRTLSGGQAQRLAIARVALRDAPILILDEPTSEVDLAAEAQILAALRRLAEGRTVLLIAHRPQAILSADRVINLAELQEGR
>CP025570.1|AZZ40648.1|507259_508306_-|iron-siderophore-ABC-transporter-substrate-binding-protein
MGGTALLALSACGATGSSSGSPASSGSAASNPAGSGTASTDTFPVSITHAWGSTTIPKAPTRIATTGWSGEDAVLALGVLPVGMPRANYGQVDKNGMLAWTARAVTKLGGTGDKLPKVYDETDSINTEAISDTEPDLILGISSGVTKEQYATLSEIAPTIPYTSKIPWGATWRDVMRVTAKAMGRTSAGEKVIADCERTMASAIAKYKGLKGRSAAVMWFDPKKLSTLTIYTTGDARPAYLTDLGFTTPASVAKQSQGAAFYKEISAENADVFSDVDIIVSYGDPKTLLPLLQKDPLISRIPAVKRGSVAVIEDNSELASAVSPLVLSIPSQVGPYAAALARAAEKLS
>CP025570.1|AZZ38760.1|506186_507263_-|iron-ABC-transporter-permease
MTPVAPTAPPAPVRTSRANRRSTVPVGRRRARLWGLAVALVALVLACAASVAVGSRSVPPGQVWSALTDPSVHTFAAEAVRTRVPRTVLGLLVGAALAVSGALMQAITRNPLADPGILGVNAGAAALIVIGMAYIGLDTPGQYIWASILGASGAAAAVWGIGSGGRGRPGPLRLALAGAVMAAVLTSVTQAVLLPRAELLQTFRSWQAGGIDSARFDQIVEVLPFFVVGAGLAAFSGRALNSLALGDEMAAGLGVRVGRVRLLVAAASVLLAAASTALAGPIGFVGLIVPHAVRAIVGADNRWVLAWSVVVGPLLLLLADVLGRIITRPTDVQVGIVMAIIGAPVFIALVRSRRMGEL
>CP025570.1|AZZ40647.1|505152_506097_-|ABC-transporter-permease
MVAALFLTCLCVGERIYSPSEAIRVVLGQKVPGASFTVGRLRLPRALAGLLAGAAFGVVGACFQVLLRNTLASPDIIGITAGANTAAVAGIILVGASGLALTGMAVAGGLLTALAIAALAWQGRGATSRLILIGIAAGAMFDAATMWVMIGGNQYDIQAASRWLTGSLNGIRLSDLTPLAAVLLSGLPGIAALARPLDTMRLGEDAAAGLGVRVRATRQAIMLVGVVILATATATTGPIAFVSLLCGPIAAHLVGHGRSCLLPAALVGSAMVLGSDLIAAHLLVHSYPVGVVTGIVGGSYLIVLIIRLTRRETA
>CP025570.1|AZZ38759.1|504253_505156_-|ABC-transporter-ATP-binding-protein
MTDHDFSAEAVTVGYGERTVIEALDLTVPDHRMGAIIGPNGCGKSTLLRTMARLLRPSSGAVLLDGRMIHQMPTRAVATVLGLLPQSPTCPDGIVVEDLVSRGRAPHRGTFARWTAADDEAIASAMALTGTAELATRPVDELSGGQRQRVWIAMALAQQTDLLLLDEPTTYLDLAYQIDVLELLAELNRSTGTTVVMVLHDINLAARYCDWLVAMREGTVMARGRPADVVTQDTMTRVFDLNTRVIADPVNGSPIVIPLGRARPAPQQPEQPEQPEKPGQPGQPAPEDRPSQQTGNRGAA
>CP025570.1|AZZ38758.1|503294_504257_-|siderophore-interacting-protein
MSTPDPRPVPTGGFRPYRVRVAARQRLSPHFIRLELAGEDLDVFGTDRLDQRIKLLLPNPDGSWCDLGLDDAGALESGDWYQRWLAAPDSARNPMRTYTVRAIDPGRRILTVDVAIHGPAGPGSRFALDATLGDELVVVGPDSRSPHSGLGIDFHPGAAPEILLAGDETAAPAVCAILEGMAATAGPDPSRGRRVHAFLEIPQADDALPVEVPSGSRLRWLAREAEPGRALIGAVGQFCRDRPEVIGTDHPATTALEDVDVDQELLWEAPQASSGGRFYAWVAGEAGTVKALRRLLVTDHGVDRGQVAFMGYWRAGRQEG
>CP025570.1|AZZ38757.1|501835_503254_+|mycothione-reductase
MTTGDSFDIAIIGSGSGNTILGKEYADKKVAIIDSGTFGGTCLNYGCIPSKMYVIPADFASSVGDAARVDVDLELAGADFRAIRDRIFSRIDPISRSGLAFRQGLDNTTVFTEEARFVDPHTLQVGSRQITAEQIVLAAGSRPRVPNLFGIDDPRWSDRIHTSDTIMRIDELPERLVILGGGFIAAEFAHIFSALGSKVTIINRSGRMLRREDLDISRQFTEELAWRASLRMSEETVAIEEDAGGHLTVVTVDSYGVDYMYPGDIVLNATGRIPNSDRLNLPAAGVAVDDDGFVTVDQYQRSSVGHIWALGDICYPGFLKHVANAEARVVRHNLLHPDSLVAADHRFVPHAVFSSPQVAAVGATEQELRQSETRYVSFTQKYSDVAYGWAMEDDSHFVKLLGDPVARTLLGAHIIGPQASTLIQTAIQTMTFGQRVDDVARGQYWIHPALPEVMENALLGLAGEMDTAGKEA
>CP025570.1|AZZ38756.1|500953_501688_-|DUF5134-domain-containing-protein
MFTLTSTPVTFIGLLILFIWCTLWSVRDLLASLGVDIPPSWAPAEPLEHGAPIAVSECFHLAMSVVMLLMVPHSWWGALPGVLTGPVFITVMSLGTLWMAAMAAWKTSWLAAGHTAMFAAMVWHLASMASHSRMGHSATMTGMGDMAHSGMAEGATTVSGLTLITGIGLPLMVCLVVLGLSGLVRAVTGRPPHPGLPACCHTSPTTPASARLSGLADAAMGLGMAWMSAGLMTPLLPFMGSLTP
>CP025570.1|AZZ40646.1|497133_498651_-|threonine-ammonia-lyase,-biosynthetic
MSAQDYLRAVLRAPVYEVAMKTPLEPMERLSRRIGNTVLAKREDRQPVHSFKLRGAYTRMRALSQQERAAGVVTASAGNHAQGVALSGARLGVRAVIVMPVTTPSIKVEAVRQLGGEVVLAGNAFDEAKEHAVALAADHGLTYVAPFDDPLVIAGQGTIGLELLQDDARLDRVFVPVGGGGLAAGIAVLIKQLMPEIQVIGVEPEESACLAAALAAGHPVTLDHVSLFAEGVAVARIGEETFRLLKSSIDDVVTVSSDEISAAVKDLFDDTRAVAEPAGAVSLAGLKKYVRGHDITGERLAHILSGANLNFGSLRYIAERAELGEQREGLFAVEIPERAGSFLHFCRVLGRRMVTEFNYRYCDPDRATVFVGVELHSREERADIASALRRGGYRVADLSDDENAKTHLRYMIGGRPPVDLGERLASFEFPESPGALVHFLSVLGSRWNISLFHYRSFGMDTGRVLAGFAGASADPGFTGHLDAVGYPWSDASDSPAYRFFQADPR
>CP025570.1|AZZ38755.1|495307_497191_-|hypothetical-protein
MERRLRLAGLPVLPGGPALTAGWCENDPVTVVLVIIIATLFVIAAAELLADRTGIAAPILLLLLGAAVALIPGMPEVEVEPELVLMIILPPLLYSAAVNMPVSDFRRNIAPIGVLAVLLVAISAGVIGFVVNRMAPGIGIAACLALGAIVSPSDAVATSIVRRAGVSRRVVTVLDGEGLINDASALVILASAVGAIASQVSAGKVIGDFLLAVLVALVVGWLIGRLMIWLRSRVHEPTADTVLSLATPFLAYLPAEHLHGSGLVAAVVAGLVASHHGPRVLTPTQRMSSRNTWGAVMLILESAVFLLMGLELTAIVKDMEAESFGWRLAVSVAAVALVLTLVVRTAVVAPLLMWVARRSRRRSRHRTRLVAATERVGQARASEDGTMEFRGTTLSPGRVERFGARLRRMISDLDYYIEHPLGPREGVVMIWAGMRGAITLAAAQTLPLDTPHRSFLVVVAFLVAAASLLLQGSTLGLVVKLARPAVAEGIDPQEQAEIRTLLHRAVRDVPVSPGMRTLLARMNRQEGGQAEDNRLQAAAVALAWRQFAEIREKPTTSPAGDAIASPEHRRRAAEISRNYALRLIVAQRRALLDASDSGQFSPEAVSAALDTLDADQLSLETRGASLD
>CP025570.1|AZZ38763.1|512540_512711_-|50S-ribosomal-protein-L32
MAVPKRKMSRSNTRHRRSQWKAEAPQLVPIVVEGRQLRVPRHLVRAYQRGLISPDD
>CP025570.1|AZZ38764.1|512715_513021_-|30S-ribosomal-protein-S14
MAKKSKIVKQHKREVLVARHAERRAQLRAARKDESLSMEERLAASRELAKLPRDSSPVRLRNRDAIDGRPRGFVGKAGISRVRFREMAHNGELPGITKSSW
>CP025570.1|AZZ38765.1|513020_513191_-|50S-ribosomal-protein-L33
MTKKSKDLRPIIKMRSTAGTGYTYVTRKNRRNCPDRLVLRKFDPMVGRHVEFKEAR
>CP025570.1|AZZ38766.1|513474_513720_+|type-B-50S-ribosomal-protein-L31
MKNGIHPDYRPVVFRDISAGMSFLTRSTANSQKSIEWEDGNTYPVIDVDISSASHPFYTGKAKVIDTAGRVEKFNRRYGRH
>CP025570.1|AZZ38767.1|514197_514434_-|50S-ribosomal-protein-L28
MSRRCQIRATRPGYGNSVSHSQRHTRRRWEPNLQTTRYWVPSLGRRVKLRLTPKGMKIIDCRGIDAVITEMLARGEKI
>CP025570.1|AZZ38768.1|514896_515673_-|phosphate-ABC-transporter-ATP-binding-protein
MAKRIEVKDLNIYYGDFHAVESVELTVEPRTVTAFIGPSGCGKSTVLRTLNRMHEVIPGAYCTGQVLLDGANLYGKGVDPVAVRRTVGMVFQRANPFPAMSIRDNVVAGLRLTGAKNKKALDEVTERALRGANLWDEVKDRLDRSGASLSGGQQQRLCIARATAVEPEVLLMDEPCSALDPISTLAIEDLINELKERFTVVIVTHNMQQAARVSDRTAFFNLKAQGEPGRLVEIDSTEKIFSNPTQKSTEDYISGRFG
>CP025570.1|AZZ38769.1|515719_516739_-|phosphate-ABC-transporter,-permease-protein-PstA
MSSSSPHDSKTAPGTPNGVAAGAGANAGVSAGVSATAGAGSGATAGAPAPRLDLSRPSAWRTARNGFASAFMVLSTLLAVAPLVWVLWSAISKGIGSLLRASWWTNAMDAADQAKWGALHAILGTVEIGLITAVISVPIALLTAIYLVEYARGTKIARVISFAVDVLTGVPSIVAALFIFALVVTTFGSHQSAWAASLALVILMVPTVLRSTEEMLKLVPDSLREASLALGVSKWRTIVSVVLPTSISGIATGIMLGLARVMGETAPLIVLLQFNQYLTVNPNTQTFATLPTIISNAYTQGSADTPTVWGAALTLIVLVMGLNIIAKAISRRYLRRMGR
>CP025570.1|AZZ38770.1|516735_517779_-|phosphate-ABC-transporter-permease-subunit-PstC
MAEPNAVAQSHGPASPHAAGQPDPHPTRVQTKPPSRVGDRIFSGTSATVAILLAVLVVLIFAFLVRSAIPALQDNESNFFTTRTWSTDSSPLNFGIAAMAWTTAISSIIALAVAVPLAIGIALFITQMAPPRLAGPVAFVVDLLAAVPSIIFGLWGSIVLSQAGFLEWIRSVLATLLGWIPIFRETPSWTDVSGTVFLASTVLAIMILPIITATSRDVMAQTPTDQIEASLALGATRWEVIKMAVLPHARSGIISGSMLGLGRALGETLAVTLILQQVSQMQLRRAFDPSIFTGGDTFASKIARDFPEALNDPKSLGALVASGLALFVITFFVNGAARMIAERGVKR
>CP025570.1|AZZ40649.1|517913_519071_-|phosphate-ABC-transporter-substrate-binding-protein-PstS
MIATMALLGSVSLAACGSNSSSSSSSPSATETSSAASSQAGTDSSSTAAAPVGNTKYTPTCPGGAINGAGSSAQANAITQVINDYKTACKGKGQVNYSITGSGAGVSAFTGKQIDWAGSDSALSADKGEVAKAKERCSANDAWHLPMVAGPIAVVYNVDGVSDLTLSTQTMAKIFAGDITKWDDEAIKKENPGAKLPSTNISVFYRSDESGTTDNFTNYLNTAAGDIWSEPHSKQWKGTGKGADKSAGVSQAVKSTKDSISYAEWSYATKNSLSMAKIDNGAGPVELTGESAGKAVSAAKAAGNGNDLRLEMQYKDTPQGVYPAVLVTYQIVCSKGLDPQKTALLKDFMSFYASSTEQAAIQKAGYAPLPAEVSGKVLASVAAIS
>CP025570.1|AZZ38771.1|519300_520212_-|NUDIX-hydrolase
MSRRKGPVLAAGAVVLRRTAEGTVQVLAVHRPRYDDISLPKGHQEPGEDSPVTAVREVLEETGVRIRLSANLQPIEYEMPNKMAKLVQWWVGTVCSEHPHEPDEEVDQAMWLDLAEARTRLSYATDVQVLEEAVKLPATTTIALVRHAKAISRKEWASGKHRNKTDPKRPLDRRGKRQAKALAALLEAYGVSRLVSSPATRCMQTLTPYAQAAGVEIQQREEFTEEAFEAHHKPTRKAMKELVAEQLADPDQPLAICGHRPVLPAMGDVLHSGNHPMATAECLVVHLNAKGKAIRQEWHRPSI

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Crispr_ID: CP025570_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025570_4

566346-566434

Orphan

Consensus_repeat	Method
GGGCACTCCGGGGCCGCGCGGGGAGCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025570_4

>merge|CP025570|4|566346-566434|CRISPRCasFinder
GGGCACTCCGGGGCCGCGCGGGGAGCTGCGAGCCCGTACATGTTCCGCACGTAATTGGTTGGGGCACTCCGGGGTCGCGCGGGGAGCTG

>CP025570|4|4|566346-566434|CRISPRCasFinder
GGGCACTCCGGGGCCGCGCGGGGAGCTG	CGAGCCCGTACATGTTCCGCACGTAATTGGTTG
GGGCACTCCGGGGTCGCGCGGGGAGCTG

Protein	Signature genes	Signature genes Name	Protein_function
CP025570.1\|AZZ38796.1\|557466_558501_+\|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB	unknown	unknown	gnl\|CDD\|236515
CP025570.1\|AZZ38802.1\|569391_570537_+\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
CP025570.1\|AZZ38804.1\|570905_571856_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
CP025570.1\|AZZ38809.1\|576959_577952_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119323
CP025570.1\|AZZ38795.1\|555854_557270_+\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|235687
CP025570.1\|AZZ38793.1\|553268_554267_+\|asparaginase	unknown	unknown	gnl\|CDD\|199207
CP025570.1\|AZZ38806.1\|573486_574383_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
CP025570.1\|AZZ38803.1\|570647_570857_+\|DUF3073-domain-containing-protein	unknown	unknown	gnl\|CDD\|378620
CP025570.1\|AZZ38797.1\|558565_560824_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	unknown	unknown	gnl\|CDD\|234921
CP025570.1\|AZZ40655.1\|551860_553249_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|224038
CP025570.1\|AZZ38807.1\|574382_575279_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
CP025570.1\|AZZ40656.1\|564931_566290_+\|dipeptidase	unknown	unknown	gnl\|CDD\|236127
CP025570.1\|AZZ38808.1\|575467_576946_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119324
CP025570.1\|AZZ38801.1\|567874_569395_+\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236113
CP025570.1\|AZZ38805.1\|572046_573363_+\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270303
CP025570.1\|AZZ38799.1\|564010_564814_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|259808
CP025570.1\|AZZ38798.1\|563270_564014_+\|hypothetical-protein	unknown	unknown	unknown
CP025570.1\|AZZ38794.1\|554335_555646_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
CP025570.1\|AZZ38792.1\|551058_551736_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurQ	unknown	unknown	gnl\|CDD\|235140
CP025570.1\|AZZ38800.1\|566550_567843_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883

Protein	Function_ID	Function_description	E-value
CP025570.1\|AZZ38796.1\|557466_558501_+\|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB	gnl\|CDD\|236515	PRK09435, PRK09435, methylmalonyl Co-A mutase-associated GTPase MeaB.	1.71535e-170
CP025570.1\|AZZ38802.1\|569391_570537_+\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	1.02118e-173
CP025570.1\|AZZ38804.1\|570905_571856_+\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	1.18059e-14
CP025570.1\|AZZ38809.1\|576959_577952_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|119323	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins. LivM is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivM forms a heterodimer with another TM, LivH, to generate the transmembrane pore. LivH is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	6.07765e-61
CP025570.1\|AZZ38795.1\|555854_557270_+\|aspartate-aminotransferase-family-protein	gnl\|CDD\|235687	PRK06062, PRK06062, hypothetical protein; Provisional.	0
CP025570.1\|AZZ38793.1\|553268_554267_+\|asparaginase	gnl\|CDD\|199207	cd08963, L-asparaginase_I, Type I (cytosolic) bacterial L-asparaginase. Asparaginases (amidohydrolases, E.C. 3.5.1.1) are enzymes that catalyze the hydrolysis of asparagine to aspartic acid and ammonia. In bacteria, there are two classes of amidohydrolases. This model represents type I L-asparaginases, which are highly specific for asparagine and localized in the cytosol. Type I L-asparaginase acts as a dimer. A conserved threonine residue is thought to supply the nucleophile hydroxy-group that attacks the amide bond. Many bacterial L-asparaginases have both L-asparagine and L-glutamine hydrolysis activities, to a different degree, and some of them are annotated as asparaginase/glutaminase. One example of an enzyme with no L-glutaminase activity is the type I L-asparaginase from Wolinella succinogenes.	8.19781e-119
CP025570.1\|AZZ38806.1\|573486_574383_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.74327e-59
CP025570.1\|AZZ38803.1\|570647_570857_+\|DUF3073-domain-containing-protein	gnl\|CDD\|378620	pfam11273, DUF3073, Protein of unknown function (DUF3073). This family of proteins with unknown function appears to be restricted to Actinobacteria.	8.19439e-17
CP025570.1\|AZZ40655.1\|551860_553249_+\|amino-acid-permease	gnl\|CDD\|224038	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism].	9.12701e-159
CP025570.1\|AZZ38807.1\|574382_575279_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	9.58804e-68
CP025570.1\|AZZ40656.1\|564931_566290_+\|dipeptidase	gnl\|CDD\|236127	PRK07907, PRK07907, hypothetical protein; Provisional.	0
CP025570.1\|AZZ38808.1\|575467_576946_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|119324	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins. LivH is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivH forms a heterodimer with another TM, LivM, to generate the transmembrane pore. LivM is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	5.853e-72
CP025570.1\|AZZ38801.1\|567874_569395_+\|amidophosphoribosyltransferase	gnl\|CDD\|236113	PRK07847, PRK07847, amidophosphoribosyltransferase; Provisional.	0
CP025570.1\|AZZ38805.1\|572046_573363_+\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	7.64925e-34
CP025570.1\|AZZ38799.1\|564010_564814_+\|hypothetical-protein	gnl\|CDD\|259808	cd08826, SPFH_eoslipins_u1, Uncharacterized prokaryotic subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model summarizes a subgroup of the stomatin-like protein family (SLPs or slipins) that is found in bacteria and archaebacteria. The conserved domain common to the SPFH superfamily has also been referred to as the Band 7 domain. Individual proteins of the SPFH superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Bacterial and archaebacterial SLPs remain uncharacterized. This subgroup contains PH1511 from the hyperthermophilic archaeon Pyrococcus horikoshi.	1.07743e-98
CP025570.1\|AZZ38797.1\|558565_560824_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	gnl\|CDD\|234921	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL.	0
CP025570.1\|AZZ38794.1\|554335_555646_-\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	1.9884e-25
CP025570.1\|AZZ38792.1\|551058_551736_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurQ	gnl\|CDD\|235140	PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase subunit PurQ.	1.04786e-128
CP025570.1\|AZZ38800.1\|566550_567843_+\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.61798e-13

>CP025570.1|AZZ40656.1|564931_566290_+|dipeptidase
MNLAEHSSELEARVDAVMESAVEELTRLVAIPSVSSLNPDQVVANAEHIADLASRAGAADVAVVTEGQGLPVVIAHWPAPEGAPTVLLYSHGDVQPTGDLSAWGSEPFTATRRGDRLYGRGTADDKGGVAAHLAAIRALGDRPPVGITLLIEGEEEIGSPSMAAIIAAHRSELAADVIVIADAVNWEQGVPSLTTSLRGVADCAVEVRTLDHPLHSGQFGGVVPDALTTLCRLLATLHDENGDVAVEGLGSYPAPDLEYPEDRLRAETAILDGVEWTGTGSLVERMWTRPSISVLAIDATPVAQAVNILPAAARAKVSLRVAPGDDAGRALEALTRHLESHVGFGAHVSISAGQIGAPGLIGISGPAGQVAEEAFRIAWGHEPVEMGCGGAIPLITDLQQTFPEATVLVTAVTDPDSRMHGIDESLHLGDFRRAILTEVLLLTGLADLPGRS
>CP025570.1|AZZ38799.1|564010_564814_+|hypothetical-protein
MNHTEWLFTTIALVMLVVGILVTCLKIIPEYERAVVFRLGRLRPLHGAGLVFIVPGLDKLVRVDTRTVTLTIPPQEIITQDNVPARVNAVVLFNVTDSRDAVMNVENYAVATSQIAQTTLRSVLGRADLDTLLAHREQLNHDLREIIEVQTRPWGVDVSVVEIKDVEIPEAMQRAMARQAEAERERRAKVINARGELQASGELKQAADVLSQSPASLQLRYLQTLLELGADQNSTVVFPLPMDIITPLLNAMGGDRRSAEPTGDQAH
>CP025570.1|AZZ38798.1|563270_564014_+|hypothetical-protein
MTAPVQIFLVCGYAVLLIAVAWLLDLFGRRSARRSREWKTANFVFHDSHGAWKCHEDHWLWPASFDPVKRVIRYRGQHEICGRCPVKDSCAPGVSAREITAPVDPWPYSEAGTFHRGMSLCILIAGLALPAGMLLMARTTAEYVALLATIAVVGLAAWPMVRSLRTRPVDIPDEIPIESSVPLDAGFDEIPGPRSRAVTRGVHGQPLTDRASDEAEQLIRRYSSRWSTGSTRQGGSRATRTRIGGPR
>CP025570.1|AZZ38797.1|558565_560824_+|phosphoribosylformylglycinamidine-synthase-subunit-PurL
MADTVENARNTPDLAQPWADLGLAEDEYRSIREILGRRPTGGELAMYSVMWSEHCSYKSSKIYLKKFAALPQTTPRGPLLAGIGDNAGVVDIGNGLAVTFKAESHNHPSYVEPHQGAATGVGGIVRDIMAMGARPIGVMNALGFGPLDAPDTARVLPGVVSGIGDYGNCLGLPTIGGQTVFDPTYYGNPLVNALCVGVLRHEDLQFAKASGAGNLVVLFGAATGGDGIGGASILASESFEAEGESKRPSVQVGDPFMEKLLIECTLELFYAGVCEALQDFGAAGISCATSELASAGDGGMHVELDRVPLRDPNLAPEEILMSESQERMAAVVTPENLERFMEICAHWQVQATVIGEVTDGDRLIVDWRGEKIVDVDPHTVAHDSPELHMPVARPDWIDPLNADHANNLPRSNDGADLAAQILALVGSSNLCDRSWITDQYDRFVRGNTVLAQPSDAGMIRVDETSGLGIALSLDANPRYGMLNPYLGAQLALAESYRNVAVTGATPVAITDCLNYGSPYDPHVMWQFSETILGLVDGCRELGVPVTGGNVSLHNRTGDQSIRPTPLVGMLGIIDDVANRIPAGFCHCGDAVLLLGETKVEMGGSAWEDVIHDGHLGGMPPMPNLPAEKALGQVLAAAAADGLLSSAHDLSEGGLSQALVEACLDHGIGVSLTLPEGEPAVTLFSESPARALVSLSGADYQRFTDLCAEHGVPVARLGEVVDSGKIEIQDLLSLDLATLGKTWQAPIPAAMEI
>CP025570.1|AZZ38796.1|557466_558501_+|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB
MGPVDVNDLVEHVVAGSRPHIARALTLVESSRPVDRERTRTMLRLLAPHTGKAVRVGISGVPGAGKSTFIDAMGCRLVDEYHHKVAVLAIDPSSANTGGSILGDRTRMGALAEREDAFVRPSPSGGSLGGVARATREAIVVMEAAGYDVVLVETVGVGQSEVAVAGMVDTFLLLSVAGTGDQLQGIKKGVLELADIVAVNKADGDNAPNAREAARNLRQAMRMMSSSTEEDSRKIPVLTCSAVSGEGLDDVWKAVQDHRSWLVDNGSLESRRTLQQHEWMWSIVRNRIMDSLDGDPEVQQRAQQACAALDAGESDALDASEQVLRTFASRVPEFGWSEPADPRK
>CP025570.1|AZZ38795.1|555854_557270_+|aspartate-aminotransferase-family-protein
MSTSSHSSTGNQREAGIRPVVGWEEDCGAAGVGHDLTGADLDAAVIEADHSRVLHSWSAQAHLPSSSIAGGSGASLWDYAGNTWIDFSSQLINVNIGYQHPRVVAAIRRQAEVMTMVAPSTSNKQRAEAAGKILEHAPAGFEKVFFTNAGADANENAMRMARLVTGRDKIISRYRSYHGNTGASIVATGDWRRIPNEYARGHVHVFGPYLYRSEFWATTAEQECARALEHLEHTILAEGPETIAGILLESVPGTAGIMVPPPGYLAGVRRIADRYGIVMICDEVMAGFGRTGAWFAFQRQDVVPDLITFAKGVNSGYVPAGGVVISSEIAHFFDERVFPGGLTYSGHPLAMAAIVAAITAMEDEGIVEHADQIGETVLGPGLRALGDNPLVGEVRGQGVFWAVELVADKATRERLEGSRLAAVSRRCHQRGLILPVHDNRIHVVPPCVITAEQATRGIEILADALAEEARH
>CP025570.1|AZZ38794.1|554335_555646_-|MFS-transporter
MTGRPQARAWIVWGAAVLAYTLAVLQRSSLGVMGLTAAAHFHATAGIVATFMMLQLAVYALAQLPAGLLLDRLGPRVVITLGAVLMTAGQLIIALTSDPGLAILARILVGAGDACTFSSAIRVIPAWFPARQVPMLTQLTGLIGQIGQIGSTVGLVTLVGTRGWRTTYLVAAAAGVVGILTSALLLRDAPAGSRDQRASASVRQLPREVLAVIRNPATGVGFWAHWSTNLGGVVYSMMWGMPYLTRAEGRSTATASGLMTFYIIASAVSGPVAARLTQRHPLRRTTLVVGMVGLAVVPWIAVLGWPGRAPLWLLATLSAGLGLCLPGGAIGFDVLRTSHPARRLGTATGIAIMGGFTASLILIQVIGLVLDRLCPGGAYTQSAFRWAMSIQLIFFAVGVWGLLDSGRRMRAMMAASGTVVPPWREAIARHRGGRDG
>CP025570.1|AZZ38793.1|553268_554267_+|asparaginase
MRVEILYTGGTLGMVDTPQGLAPGADLEGWLHRLLSGTELDRGVGLVTFDHLIDSANATPEDWQHIVDELWARHDDADAFVVLHGTDTMAYAAAALSYALTGFDKPVVLTGAQYPLGVVGTDAAPNVTGALRAAMAGQSFGVAIFFGHKLLRGTRVTKTSSWAFQGFGSPSVPELARTGAPWQWTAPGPRGCGWDSPRPYRRCDIAVLDLAPGITADRLAAMIDPRPEAVVLRAFGVGNAPSDEPGLVDVIAATIADGVPVVVTSQCHQADVLLGHYEAGWELARAGAIGSEDMTLEAVYAKLVFLLSQGLGAEEVAHWMGTSIAGELTVRS
>CP025570.1|AZZ40655.1|551860_553249_+|amino-acid-permease
MIAIGGSIGTGLFLGAGGRLAKGGPALAIAYAICGLFAFIMVRALGELSIHRPSSGAFVSYAREFMGEKGAYITGWLFFLDWATSVMADITAVALYLHFWTFFQPVPQWVLAMIALAVVFTLNMFSVKYFGEAEFWFAAIKVTAIVAFMAVAIWAIVTGHAVGKDHAGLANLTQHGGFFPLGVAPLLTLSLGVIFAFGGTEMVGVAAGEAAEAKKILPKAVNSMILRIFVFYVGSVILMTLVLPWTAYSGDESPFVTFFARIGVPYAGDIMQVVVLTAALSSLNAGLYATGRTLRSMAVAGEAPRMASKLNRHQVPAGGITITASLGLIGVLINYIYPSGAFDIVMNLAGIGIAGTWISILASHGIFVRRARRGDVERPDFRLRGAPVTNIVAIVFLVVVIVSMWFDPGVGRPTIYMFLGVVVLLVIGWFAVRNRIKGDLLDNILDADSAESADTTSQTSRK
>CP025570.1|AZZ38792.1|551058_551736_+|phosphoribosylformylglycinamidine-synthase-subunit-PurQ
MAPRIGVVTFPGTLDDQDAARAVRLGGAEPVHLWHASADLKGVDGVILPGGFSYGDYLRAGALAALSPVMTAVREAADRGLPVLGICNGFQVLCEAHLLPGTLMRNEQRRFHCSVQELVVESIDTVWTCDFKPDQRILIPAKHGEGNYVASTDELAALEANNQVVFRYVRNPNGSEHDIAGVTNETGNVVGLMPHPEHAVEDLASGGTDGLGFISSVRRFLSVHV
>CP025570.1|AZZ38800.1|566550_567843_+|MFS-transporter
MAAIRYRTLFSYSGATFVAVGFAARLPLAMSQLGTMLLVSSPMVAGRMGPGGIAAGAVALANAIGSPLFGGLTDRRGQRGLMLLQAMAGGIALIVEAVVAVIGAPWPVVAAIGAVAGFFMPQIGTMARVRWRQIAAARPAQRAGILETSFAWEGSGDEASFALGPALTGVLAVALGPVWAIVVAGVMLLVFGTWFAVHPTVRLVKATARAASARSAAAGSSSGPTRERLFTPGVLAATLGLLMIGVIFGSVQTGTTTLATAAGRPGLAGLLHAVLSIGSATAGLLLPRLAHRVGLVGRWRVFATALAVLTLPLLAVNTLGGLLPELLVLGLAVAPYLITLYSVAERAARPSRIGAAMTVLAATTSLGYSLGASIAGQLADWGGHTPAYAVTVCAGAIACLLGWLVARRVTPAPRVHDPRKHPGRPTVVTD
>CP025570.1|AZZ38801.1|567874_569395_+|amidophosphoribosyltransferase
MTRADGHLTADLDPQDHGPQDACGVIGVYAPGEEVATLVYFGMYALQHRGQESAGMAVSDGRRTMVFKDMGLVSQVFDGPTLDTLKGSLAIGHTRYSTTGSSVWDNAQPTFRSRPGGGGLALAHNGNLTNSEELEELIRARDPEASVPHKERMDSTSDTALMSALMATYEGPIDEIAMKVLPVLKGAFSIVFMDDTMLCAARDPQGIRPLVLGRLETGWVVASETAAIDIVGGTFVREVEPGELITISAAGLRSARFATARPKGCIFEYVYLARPDTIIANRRIHNVRVKVGKILAQQAPVDADLVIPVPESGTPAAIGYADESGIKYGMGLVKNSYVGRTFIQPSQTLRNLGIRLKLNPLRDVIEGKRLVVVDDSIVRGNTQRQLVAMLRQAGAKEVHVRISSPPVKWPCFYGIDFATRAQLIAAGLSVEEIAASIGADSLAYVSLEGLIQATHVPKDDLCRACFDGVYPVQVPPEADHLLADSPSATGRDHQATLPEAPQEDPS
>CP025570.1|AZZ38802.1|569391_570537_+|phosphoribosylformylglycinamidine-cyclo-ligase
MTPPSQSSSTQPSSPGPTSPESAQAGSGTPSAYARAGVDIEAGERAVELMKAHVAQTARPEVIGGLGGFAGFFDASALAHFRHPLLATSTDGVGTKVAIAQAMDVHDTIGFDLVGMLVDDLVVVGAEPWFVTDYIACGRVRPERIANVVKGIAQACEKAGCALLGGETAEHPGLLAADEYDVAGATTGAVEKDAVLGPDRIVEGDALLAVASSGLHSNGYSLVRSVLLGQAGWKLEKVVPDLGRSLGEELLTPTTVYAADLLALIGAVEVHAMSHITGGGLANNLARVIPDGLEATVDRSTWAPAPIFRLVQEVGRISRPDIEETLNMGVGMIVVLPADRVETAVTFLAGRGLTAWQCGSMSSRGHDDAGAVQLVGDYRSL
>CP025570.1|AZZ38803.1|570647_570857_+|DUF3073-domain-containing-protein
MGRGRAKAKQTKVARDLKYRSVDMDLESLERELRGDKVREREDPGKEDELSDKYADLAEKYSHYGEDDQ
>CP025570.1|AZZ38804.1|570905_571856_+|alpha/beta-hydrolase
MRWIADPVVPGFEWARIALPRAAKVPGDPEGLLTASLIRPHPPRRRRALLYLHGWSDCFYQAHLSDEVESWGMDFHALELRRYGRNLVDGQMAGWIPDLADYDQEINAAMSLIGADHDEVTLMGHSTGGLILPLWMARHPHRASGIILNSPWIDLQGSTMTRLMAGPVTRAVSQASATTVLPLPSHDNYSRSVRREFGGEWAIPFQKSHGDAFVVRAGWLNAVLAGHAMVEQGLGIEVPILTLLSARSDLSATWSETMRGADTVLDVSRLAAASVHLGRHLTLVRVTGGLHDLVLSAPSVRAGVFAEMRRWVQAYQ
>CP025570.1|AZZ38805.1|572046_573363_+|sugar-ABC-transporter-substrate-binding-protein
MRGKRLAALATASLLVLSGTVACGSSSSTKAGSDETSASTPKAGGAGGTVGVFTWWADGSEKKGLDALEKMFKEKYPNDTFQNLAVAGGSGSNAKAKLASDLKNGNPPGSFQGHAGAELMDYIDNDQVEPVDSIIKEVGGESVFPKTLLDRLTVDGHIYSVPVNVHRANVVWSNTAVLKKAGVTSTPKSVDEWLADMAKVKASGVSTPLSIGGTWTQTELFESILASNLGADEYNKLFTKDGKWDSDGVKASIEQYKKALSFANTASDGDDWPNATDMVANGKAAYNVMGDWAVAQFEMRNKTYKTDWDAFPMPGKENIFDFLADSFTLPTGTKNPEGTKDWLRFVGSKDAQTTFNKVKGSIPPRTDISPEGFSPYQQSAMKDFKSPDTKIVSSIAHGAAVSLAWSSEINTAMSKYYQDKNSANLVSALVASHGKYAQ
>CP025570.1|AZZ38806.1|573486_574383_+|sugar-ABC-transporter-permease
MVKLRRWLPSFLFVLPSIILIGIFVYGFIGKNIVASFATVRTRSGRLKAPGGFQNYSTLIGDPRYQHALWNLLVLTVVFIAGTMFFGLLWALLLERGVRAEGVFRSVLLFPMAISFIAAGVVWRWLLSPAQGSDAVGLNQLFQMMGLDGLQSSWYSAGRFNMAAMAIPAIWQLSGYIMALFLAGFRGISEDQREAARVDGATEFKLYRHVLFPQLSPIALSALIIVGHMSMKMFDLIYSIAGQSSYTAEVPATLMWTQMFQLNDPTAAAVNATLLLLIVAVAVIPYLIYTNRTEKGAR
>CP025570.1|AZZ38807.1|574382_575279_+|carbohydrate-ABC-transporter-permease
MSSATLEADRLAAVPHRHRRSTRGQKAFGTVQYALLFVFSIIVLMPAYVLLVTSFKRQGDYDQSTAWQIPTTWSVEGWVAAWNTLAPAVGRSLVMAILAAVLSSVLGSLNGYIFAKWHFPGSHVIFVLFLFGMFIPYQAIMIPLSGMMLNIQDSAPWFAGVPTLILCHIVYGIPICTLIFRNYYATSVPNEMIEAARVDGATTWSTYTRVVLPVSPPGFVVTLIWQFTSAWNDFLFALFLTNQNNGPVTFGLNALASGQNPNYPQIMAGVLVASLPTLIVYIVLGKYFVAGLMSGSVK
>CP025570.1|AZZ38808.1|575467_576946_+|branched-chain-amino-acid-ABC-transporter-permease
MRPGRRRGSPGTPQRAGDTGGKRVRPAHPAIIRTSYGGRLWRLGLALLAFLALFGTLQAQNAPGAHAAGVQLIVTVADDSGKPVAKVGLTVADAAGKLIKGTTDAQGKATVDLTASGRYGVYFDVATLPKGVGPAANPTVRATTGNISPQFTAISLSASGVRTAVTPTPLATAPSSASTPGATAGGSGSGSSGGSSGGTSFIDQLTPKIATGLTFGLLLGLASIGLSLIYSTTRLNNFAHGELVTFGAFMAYMIAGQWGLNGWIAILGALVLGGCFGYLQDISLWRPLRKRRLGMMQIMIVSIGLSLALRYIFAFIWGPDRLSIPADNDPVVSFGPVNLRYWDVVGSIIAIVLLVLVALFFSFTRIGKATRAVADNKALAAATGINVELIIRIVWVGGGALAGVAGALIGYYQTLQWNAGALILLLLFASVTLGGLGTTWGALVGAIIIGLAMDVSTMWVPTSLKYVVAMLIMIVVLLVRPQGLLGRKQRIG
>CP025570.1|AZZ38809.1|576959_577952_+|branched-chain-amino-acid-ABC-transporter-permease
MDFSFISQALSQLFAPDTAAYALATIGLAVHFGYTGLMNFGQSAFMAVGAYFFAIGARTLNMPLPLCLLFGVLGAVVFALLLGIPTLRLRADYLSMVTIAAAEIVRYVAITPELTPLTGGQGGLTSFDYGNAWAALNPIPAPASGGFYTFGPLSYSRDDLFNLIVCWAVVIVAAVLVWALMRSPWGRVVRGIREDEDAVRALGKNVFSYKMQALVLGGVLAGVAGMLYIMPKGLNPDIGGTQTTFFLWTILFLGGAATVFGPIIGSMIFWFTLIVTDGVVSLLTTSNILPISGIQGGQIRFILVGLGLMALVIFRPQGIFGNKAETYFNG

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Crispr_ID: CP025570_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025570_6

2053072-2053147

Orphan

Consensus_repeat	Method
CCGTGACTTTCGACCAAGATGCCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025570_6

>merge|CP025570|6|2053072-2053147|CRISPRCasFinder
CCGTGACTTTCGACCAAGATGCCGAGAAAAAGGAAACCGTCTCTCCTGATTCCGTGACTTTCGACCAAGATGCCGA

>CP025570|6|6|2053072-2053147|CRISPRCasFinder
CCGTGACTTTCGACCAAGATGCCGA	GAAAAAGGAAACCGTCTCTCCTGATT
CCGTGACTTTCGACCAAGATGCCGA

Protein	Signature genes	Signature genes Name	Protein_function
CP025570.1\|AZZ39897.1\|2048214_2049282_+\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176197
CP025570.1\|AZZ39894.1\|2044898_2045729_-\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
CP025570.1\|AZZ39898.1\|2049285_2052828_-\|1-pyrroline-5-carboxylate-dehydrogenase	unknown	unknown	gnl\|CDD\|143443
CP025570.1\|AZZ39901.1\|2054720_2055434_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|213235
CP025570.1\|AZZ39900.1\|2053965_2054739_+\|hypothetical-protein	unknown	unknown	unknown
CP025570.1\|AZZ39896.1\|2046321_2048022_-\|DAK2-domain-containing-protein	unknown	unknown	gnl\|CDD\|237723
CP025570.1\|AZZ39903.1\|2056599_2057364_+\|hypothetical-protein	unknown	unknown	unknown
CP025570.1\|AZZ39902.1\|2055433_2056603_+\|hypothetical-protein	unknown	unknown	unknown
CP025570.1\|AZZ40818.1\|2038863_2040225_-\|sn-glycerol-1-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|341454
CP025570.1\|AZZ40819.1\|2061517_2062363_+\|metal-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224033
CP025570.1\|AZZ39905.1\|2058881_2059433_+\|hydrolase	unknown	unknown	gnl\|CDD\|376404
CP025570.1\|AZZ39891.1\|2042057_2042912_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|319833
CP025570.1\|AZZ39907.1\|2060646_2061516_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213202
CP025570.1\|AZZ39893.1\|2044254_2044746_-\|ribose-5-phosphate-isomerase	unknown	unknown	gnl\|CDD\|376799
CP025570.1\|AZZ39904.1\|2057421_2058882_+\|allantoin-permease	unknown	unknown	gnl\|CDD\|271377
CP025570.1\|AZZ39890.1\|2040399_2041962_-\|xylulose-kinase	unknown	unknown	gnl\|CDD\|198360
CP025570.1\|AZZ39892.1\|2042957_2044037_-\|hypothetical-protein	unknown	unknown	unknown
CP025570.1\|AZZ39895.1\|2045810_2046314_+\|phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|225145
CP025570.1\|AZZ39906.1\|2059596_2060547_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238502
CP025570.1\|AZZ39899.1\|2053607_2053982_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP025570.1\|AZZ39897.1\|2048214_2049282_+\|zinc-binding-dehydrogenase	gnl\|CDD\|176197	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	1.25284e-128
CP025570.1\|AZZ39894.1\|2044898_2045729_-\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	1.28714e-75
CP025570.1\|AZZ39898.1\|2049285_2052828_-\|1-pyrroline-5-carboxylate-dehydrogenase	gnl\|CDD\|143443	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.	0
CP025570.1\|AZZ39901.1\|2054720_2055434_+\|hypothetical-protein	gnl\|CDD\|213235	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter. The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multi-enzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.	2.60647e-60
CP025570.1\|AZZ39896.1\|2046321_2048022_-\|DAK2-domain-containing-protein	gnl\|CDD\|237723	PRK14479, PRK14479, dihydroxyacetone kinase; Provisional.	0
CP025570.1\|AZZ39907.1\|2060646_2061516_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213202	cd03235, ABC_Metallic_Cations, ATP-binding cassette domain of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.	3.18462e-84
CP025570.1\|AZZ40818.1\|2038863_2040225_-\|sn-glycerol-1-phosphate-dehydrogenase	gnl\|CDD\|341454	cd08175, G1PDH, Glycerol-1-phosphate dehydrogenase (G1PDH) catalyzes the reversible reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in an NADH-dependent manner. Glycerol-1-phosphate dehydrogenase (G1PDH) plays a role in the synthesis of phosphoglycerolipids in Gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires a Ni++ ion. In Bacillus subtilis, it has been described as AraM gene in L-arabinose (ara) operon. AraM protein forms homodimer.	4.42654e-122
CP025570.1\|AZZ40819.1\|2061517_2062363_+\|metal-ABC-transporter-permease	gnl\|CDD\|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	3.20972e-40
CP025570.1\|AZZ39905.1\|2058881_2059433_+\|hydrolase	gnl\|CDD\|376404	pfam00857, Isochorismatase, Isochorismatase family. This family are hydrolase enzymes.	7.54684e-23
CP025570.1\|AZZ39891.1\|2042057_2042912_-\|HAD-family-hydrolase	gnl\|CDD\|319833	cd07531, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Bacillus AraL phosphatase, a putative sugar phosphatase. Bacillus subtilis AraL is a phosphatase displaying activity towards different sugar phosphate substrates; it is encoded by the arabinose metabolic operon araABDLMNPQ-abfA and may play a role in the dephosphorylation of substrates related to l-arabinose metabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.53552e-78
CP025570.1\|AZZ39893.1\|2044254_2044746_-\|ribose-5-phosphate-isomerase	gnl\|CDD\|376799	pfam02502, LacAB_rpiB, Ribose/Galactose Isomerase. This family of proteins contains the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB).	1.62503e-50
CP025570.1\|AZZ39904.1\|2057421_2058882_+\|allantoin-permease	gnl\|CDD\|271377	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain. This NCS1 subfamily includes Escherichia coli CodB (cytosine permease), and the Saccharomyces cerevisiae transporters: Fcy21p (Purine-cytosine permease), and vitamin B6 transporter Tpn1. NCS1s are essential components of salvage pathways for nucleobases and related metabolites; their known substrates include allantoin, uracil, thiamine, and nicotinamide riboside. NCS1s belong to a superfamily which also contains the solute carrier 5 family sodium/glucose transporters (SLC5s), and solute carrier 6 family neurotransmitter transporters (SLC6s).	4.17417e-41
CP025570.1\|AZZ39890.1\|2040399_2041962_-\|xylulose-kinase	gnl\|CDD\|198360	cd07783, FGGY_CarbK-RPE_like, Carbohydrate kinase and ribulose-phosphate 3-epimerase fusion proteins-like; belongs to the FGGY family of carbohydrate kinases. This subgroup is composed of uncharacterized proteins with similarity to carbohydrate kinases. Some members are carbohydrate kinase and ribulose-phosphate 3-epimerase fusion proteins. Carbohydrate kinases catalyze the ATP-dependent phosphorylation of their carbohydrate substrate to produce phosphorylated sugar and ADP. The presence of Mg2+ is required for catalytic activity. This subgroup shows high homology to characterized ribulokinases and belongs to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	0
CP025570.1\|AZZ39895.1\|2045810_2046314_+\|phosphoribosyltransferase	gnl\|CDD\|225145	COG2236, COG2236, Predicted phosphoribosyltransferases [General function prediction only].	3.41646e-39
CP025570.1\|AZZ39906.1\|2059596_2060547_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238502	cd01020, TroA_b, Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).	1.75114e-68

>CP025570.1|AZZ39898.1|2049285_2052828_-|1-pyrroline-5-carboxylate-dehydrogenase
MGTHGTDHDDRHDENPEDSWISAGPRPAELADEAVQLARRWALDNSSQQGRTGAVARWRGMLPRDRGRVAATLLSQVLREPSGLPFTVEFIDRVMRPEDPGTAAAALARLSRTDASFLPPALRAGVRLAGRTAPHAPRLVVGLARVVLRQMVGHLIIDARPRALGRALRRLRKDGVRLNLNLLGEAVLGDREAAARLAGTKRLLARDDVDYVSVKISAVVNQLDLWAHDATVQEVADRLAPLFRLAARSATAKFINLDMEEYHDLDLTIDVFQNLLDRPEFLTLEAGIVLQAYLPDSLAAAQRLTAWADRRTARGGAGIKIRLVKGANLPMEKVDAELHGWAQAPWHSKVATDSNYLRVLDWALTPERTRSVRYGVAGHNLFSIAMAKLLADRRGVGDRVEFEMLLGMVPDQVERVGADVGGVLLYTPVVHPDHFDVAISYLVRRLEEGAAAENFMSAVFELGRDPELFAREEARFRAALDGLTRTVPAPHRHQEIDRVPDPADDYRPSTDSDPALAPVREWAAEVAAVMDHCRLGATTVASHHLASVEEVDDAVATGLAAQPGWNGLGAARRAGILREVAAEFARRRGDLLALAGAETGKIVAEGDVEISEAIDFATWYADHAIGLEQVDGATFTPPRLTVVAPPWNFPLSITAGSVLAPLAAGSAVLLKPAPQARRCAAVIAECLWQSGVPREVLQLGDAAEDEVGRRLISHPDVERVILTGAHDTATLFRSWRHDLPLLAETSGKNAIIVTENADYDLAAADIVRSAFGNAGQKCSAASLVILVGQAYRSRRLRHQILDAAASLRLGDPSDLATQLGPLIQPAEGKLLEGLTTLDPGQTWALRPRRIDPSGRFWSPGVRAGVRPGDRYHLTEYFGPITGIMSAPDLATAVSYQNGTPYGLTAGIHSLDPAEISWWLDHVQAGNLYINRGITGAIVGRQPFGGWKKSAVGPGAKAGGPNYLAVLGSWAPAEPRTPAPDGPLSPRVEQFLSHIAHRRAEAVREGWLWDAAHRDAAAWAHEFGIARDIGGLIHERDEFRYRPAATLIRIGPDADLSDAARACSAGLLAAGPVLSVSLDPRVDPVLASALTALGVVCDVVAQPDWLVSMGAPGAPRRVRLIGADPTEVAAATAGDPDLAVWSWPVTAAPRVELLAFLREQSVSLTAHRFGTPSAELAELAI
>CP025570.1|AZZ39897.1|2048214_2049282_+|zinc-binding-dehydrogenase
MTSTMPTLTLRGPGDVALVDKPVPSPGPGEVLLAVEATTICGTDLRIISGEKTSGVRPGATLGHEVAGRIAAIGEGVAGSPGGADLVVGRQATVSIVVSCGCCRACLIGREHLCSGLELVGYGIDGGLAPYLLVPARAVARGNVIVSPTELPAVRLALAEPLSCVLNGHHRHGGVNPGETVVVIGGGPIGLLHTQLALAGGAARVILCDRHEERRAVARGLGATGVAPEELADRVADLTGGWGADVVVVAIGRTELAETSLELAAPGGRVSWFAGFPKDSQSLLTPNTVHYQELTVSGGSNARRADVHDAVRLLAAGVIDETPIVTHTFGLSQWPEAIDAVRSHLGIKIAIDPRR
>CP025570.1|AZZ39896.1|2046321_2048022_-|DAK2-domain-containing-protein
MTRVLNDPDDFPAQAVAGLASAFPQHLKPVFGGVARATVTRPGKVALVVGGGSGHYPAFAGWVGQGFADGAVCGNIFSSPSGAQAYSVCKAADRGAGVLIGFGNYAGDVLQFGQAAERLKSEGIDTRCLLVTDDIASAGPDDLSRRRGIAGDLPTFKVTGAACEAGLGIDEVVEVFNRVNHRTRSFGVAFKGCTLPGADQPLFRVAEGRMGVGMGIHGEPGIHDADLGTADDLAQILVDGLLADRPEDAGVRVVPIVNGLGDTKYEELFVIWNDIRRRLVEAGLEVVDPQVGEFVTSLDMAGLSLTLVWLDEVIEPLWLAPCDTPAYRRGAIGEVELDTAELSQQAEAVTVATPGSPVSQEVAGTVVGALDLMRSMLVERQDELGRLDSIAGDGDHGIGMARGSTAAVQAAREVAAEGAGALTTLAAAGAAWSEQAGGTSGALWGAALTAFGSALGDDQLCRPELVVRAAGAALEAVTRLGGAQLGDKTMVDAMEPFVRTLQGSTADLPTAWGAAVLAADQGARSTAGIVARLGRSRPLGEKSLGTPDPGAVSFVEVVRAVGSVIG
>CP025570.1|AZZ39895.1|2045810_2046314_+|phosphoribosyltransferase
MTAYHADSSDVVDKEVLTWSRFGTAQEELAQQIADSGFHPEVLISIARGGMLLGGALTYSLGVKLTDAVNVEFYTDVNQTLPDPVLLAPMLDTASIKGKRILVVDDVADSGRTLALVLQLLSGYGAEVRSAVLYTKPGTVAHPDYQWKTVDRWIVFPWSAKPPVTAH
>CP025570.1|AZZ39894.1|2044898_2045729_-|DeoR/GlpR-transcriptional-regulator
MSSSATDQSGRRGQDGPRGRQLAIAETVIRNGSMSVEDLVSLTGVSAMTIYRDLSVLEDSGVLTRHRGQVVAVASGLHEADADFRLEQSSAEKQSVAGEAATLVTSGCSLMLDDSTSGVWLLRALPDISNVTVVTNSLLVADEVAACRGAKLVVTGGEYQAWAHSLMGPTAVRTIRSMHADLAFVSASGIFEMGCYHPYQEVVEVKRAMLDSAETRVLLLDHTKFNRRALFKFADLQEFDHVVVDDKSSPEMLSHLRETGVQVSVAPSPGGDGGRR
>CP025570.1|AZZ39893.1|2044254_2044746_-|ribose-5-phosphate-isomerase
MGFTIVVAGDPAGVDYKEAIKADLEADPRVDEVIDVGITPGEKTLYPHIGVAGARVIAEGRADRGIFICGTGMGMAISANKVPGIRACTAHDSFSVERLIMSNDAHVLCLGERVIGLELARRLAREFLDYTFDPTSHSKANVDLISEYEANAGGQIAGAGQDC
>CP025570.1|AZZ39892.1|2042957_2044037_-|hypothetical-protein
MFTASLGVFIFGLLAAIAGGAVGAAIGGNYAFVMTGFMVLVSWGIFAATGNTFGFDFLAFGPFFGPYVAFAGGVAGAIYATYKGYMTDGKDVNSPLAGLGKPDVLMVGSLFGVFGYLVQIGISYIPWFGKHTDSVALTVLISGLAARWMFGGVKKQQLFTGSMHNPELFHEDASSFPAKIKPGPNGRWLEWQEKPSQLITIGSLFGIFAGAASIFLAANVGAYLTSRGLPNHLAAANANSFAFGISAIIILFLITNRNMPVQHHVTNIAGLAAVQFFPLLMGSTFASFKWTATSTWDSHTWLMVVVALIIAAVAGIVAAVLAELAARLWYNRGTSHIDPPAAAIWISNTLVVTLAAWMS
>CP025570.1|AZZ39891.1|2042057_2042912_-|HAD-family-hydrolase
MNDIVNAPTTFQQAYVFDMDGTIYLGDHLLPGAKRMIEELHRRQIPVRFLSNNPTKDPHQYVEKLARLGLPTEVSDISNTVVTTTNWLRANHPDATVFAISEEPLKRSLREAGIRLSEDPAEIDIVVASYDRQFDYRKLQIAFDAIWFHKRAFLVQTNPDRFCPFPGGRGEPDCAAITAAIEACTGTTCQVNLGKPSPVMLTAALEGLDVAVEDCVMVGDRLQTDIQMALDTGMGSACVLTGEATADDVAALDRAHRPTWVLDRIDRLIPASVWDELGWSDDDQ
>CP025570.1|AZZ39890.1|2040399_2041962_-|xylulose-kinase
MIDNGPYVLGIDYGTESCRVAIFDLAGRPLTFAATPYPTNFPHPGWAEQDPEDWWKALQASAHRAISNAGISPSAIAGISYDATTFTMVTLDSKGESIRPAIMWMDNRATTQAARAEQSDSVARLMNNGGKGAAPAENFPFKAAWLKEHEPENYARAAHIVDAADWVTYKLTGEWTANINTHSIRSYYNRAQGGWPVDFYEAVGCGDLFEKVPERVVNLGEQIGVLGTIPAQLLGLRPGIPVAQGPGDAWAGQIGLGVLSPGTFALITGSSHVLSGQSDREIHGEGFWGSYTDAVVPGQFTVEASGVSTGSVLKWFKDNFASDVVAAAEKVGLNPYDVLNAQSRDIPIGSDGLIVNEYFQGNRTPYTDSKARGIMWGLSLAHTPAHVYHAIQEAVCYGIGHSVKAFKDAGVNVEKMVACGGSTKSRDWIQMHSDVTGVPIALTEVGDAVVLGTCMIAAVGAGLYKDLPEAGANMVHEIDIIEPDPQRHEQYQFYLDKYMRSFPLMQSLIHELVDHEAAKH
>CP025570.1|AZZ40818.1|2038863_2040225_-|sn-glycerol-1-phosphate-dehydrogenase
MSELIERALADSDDTDVVVMGHGVLDQTGPVFTKLFGDAKAIIIADGNTWGVAGEAVKASLTGAGVELVEPMIFPAHPTVYAAYENVQKIRDHLAGLDGVIACSIGSGTLNDLTKRASDELGRRYMNVCTAASMDGYAAFGASITENGFKHTMSCRAPQALIADLPTMAGAPQRCTATGLGDLIEKVPAGADWIIADELGIEPIDKEVWDLVQGPLPQAISDPKGLSVGKPEALEGLVEGLVMSGLAMQKYRISSRPASGAGHQFSHTWEMEKLGMDQEPPLTHGMKVGLGTIAVLALWAEILTIDFSSLDIDAAVAKWPSAQEMEAKVRRNFTGEMLEPAVKQTMDKYLTADQLRERLELVARKWPEIQRRCADQVMPAEQVEKILKEVGGVYHPGQIGLTEERFHQTYFRCQMIRSRYTLLDFLLEAGVLQEEVDKLFVGDGFWAKRPWKH
>CP025570.1|AZZ39899.1|2053607_2053982_-|hypothetical-protein
MGVFTTGEFHASMSPVRIALGHESTQTAFVLEDGPIHTVRPEEAIPRVLSELAITAPLSSAARNMNGVNASLPVLRSSGDGLEADCGLNSSTAAITTTTAATLLTRAFFFMVVRAQKFFLAAVH
>CP025570.1|AZZ39900.1|2053965_2054739_+|hypothetical-protein
MVKTPTPLLRGQPAVPLADGFQLWAPVRLGGAVLVLRTSKDGTTKATWATATGESAPIRIPGRAPTWGGTQDGPGVITTTEGSTTWATVATQVNGKPSLGHPFKIAGEGGNCVGPNGTSLVPIGEQARLVDQQGRTLPLDLGVTANDLGACTISRTGFITASLSASLGATTSYTSVLRFFSSKGALLRTVKEPTESIPTASRDGSTASFRTPQGIAVSTANGRIRTTYKGAIASRFTASGALVLLYPDGHVEWRKNP
>CP025570.1|AZZ39901.1|2054720_2055434_+|hypothetical-protein
MAEEPVSSTLAVSGLSHTFSNGSRIGPVTFTVEAGSCLGLVGANGAGKTTELKMICGLASIASGTLTVGGKEPVRLGPEVSITGMIEEPAFYPFLSARENLRAFSGGYSERIGRIAAALANVELEDSRLHYSKYSQGMRQRLGIARLLVCSSPVIVLDEPTNGLDPVFLHRFREIVANLKAAGHAIVLSSHMLHEVQQICDSYVMMNGGEQILGGATADLAEGATIEDLYFSAIGLT
>CP025570.1|AZZ39902.1|2055433_2056603_+|hypothetical-protein
MRTAWRIALRSPLLVVGLAVWAVVAAWMGVIKGVTLNWRQVLGGFDSMADQILPATCVLISFWVFGPDAQDSIRRDRRSTGLDERRWTAQRLLVACTLALAWCLLAGGASLALSRLGPALTVTALAPWPASIGLILLRGLLVTAWAAALIHAVRIGPAIGLAVAAVGVALALVYLPDNPVLDLVRVLLPTAALRALHAAPSIYYPYGTRVLQLCLLSGAVWTVVALNALFSRPALREPRTTTTATRGDRRRSLRGWIAIPLAAGCLAAGAVIPGLATATVPMNARPFLLLERFAGTSPQQRAEDFLLSLRTNSSRADRLSVDGSARRTLGDSVWAFASLPSGATVLLDRVDDKGHAQVRVNGSQMGLCMVKNEKGWLVSGVSEQEDCYR
>CP025570.1|AZZ39903.1|2056599_2057364_+|hypothetical-protein
MTELHTRVLIAIRRLRTRRLLTATLITGGILGLWRPLIDGLSAINPIGAATTALTLCRWPGGLAAVAITASLCGADRDAGLDREQRLCGTHGHTRIALDLACALAASLLLAAGSCLVAALVGLGGWLRDGLPALSLAGADPLREAGVSTMVIVVATLATALLCHACGWSARTALVVLLVMAGSFMAVLMYVGTGRTAIQVLHPLSGPWRLLYHDPASILFIDISRRTAILLVLGWGMLAVLIGVLVARRRYSSR
>CP025570.1|AZZ39904.1|2057421_2058882_+|allantoin-permease
MTMSASESTRRSAGIEMTGIEIIEESERTARPRNLFLPWFASNISVFGMSYGAFVLGFGISFWQATVATLLGVVVSFIFCGVIAIAGKRGSAPTMVASRAAFGVQGNKVPGIISWITSIGWETSLAISAVLATATVFSRLGWSSGTTVKVIAAIVVALLIVLGAVAGYHIIMRMQSVLTWVTGIVTIIYLVMAVRAIHWDAVAAIPPGPWQSVVGALTMVMTGMGLGWVNIAADWSRYQSREARGGSIVFWNTFGGSLGPVFLITFGLLLAGSSKNLSEAVQVDPVGALATILPTWFLVPFLVVAVLSLLSGAINGIYSSGLTLLSLGIRIPRPAASLIDGVILTAGTIYVVFLSPNFISPFQSFLVTLGVPLAAWAGIMMSDIALRRRAYDDADLFRPEGRYGAVDWVSLVTLVVVTAIGWGLVINQYPGVGWNDWQGYLLGPLGLGGREGSWAWANIGVIAALVLGFLVTFLARRSRVRHQESF
>CP025570.1|AZZ39905.1|2058881_2059433_+|hydrolase
MSGFDLPWLVVIDAQRIFADPSSPWCAHDFEAVVGPIGRLSERFEDRVLVTRWLPGSEHPGAWADYFDRWSFADRPDDDPCFDLVDAARGWSRRPGLDLTTFGKWGPRLAGITGPTPHLVLVGVATDCCVISTALAAADAGAWVQVVSDGCAGSTPENQAAALRLMGLYSPQIEITSSSDLLG
>CP025570.1|AZZ39906.1|2059596_2060547_+|ABC-transporter-substrate-binding-protein
MSSRFLTHSISRRVLATVAVAALPLSLAACSGNGSADAAGSASSGSSAAGKVKVVASTNVWGSVAEAVGGDHVEVTSVITSPAQDPHDYEATAKDKLTFSNAKIALVNGGGYDDWASTLAKGSSATLVDAVKISGFNSSVEGFNEHVFYSMDTARKVAEVVATDLGKADPSHAADYTKNAQSFGSEIAKLKERAKTAGAAHKNLSAVATEPVAGYLLTDMGIKNITPEQFVEQAETDAGPSVKVINETTQLLTTKKAGLLVVNGQTSDDVTKQLQAAAKKVDVPNVGVTETFPEGVTSYSQFVGDTITHISEALSK
>CP025570.1|AZZ39907.1|2060646_2061516_+|ABC-transporter-ATP-binding-protein
MDAQTPVPSGHGTELSDPDTRSQAAQLKGAEVTFGDRVLWHDVDLTVHTGEFVAVLGPNGAGKTTMLRVLLGQIPLSAGTATVAGHPVTKGSADIGYVPQQRAMDTLAPIRGRDLVTMGVDGHRWGPRWPSRARRRKVDDAIRQVGATSYAEAPISQLSGGEQQRLRIAQALVTDPALMLCDEPLLSLDIRHQDEVTLLIDQARRAHEIGVLFVTHEINPVLPYIDRVAYVAGGRVLVGTPDEVMRSETLSELYGSPVQVFRRNNRIVVLADEEHGPHEHGEHQAGTRD
>CP025570.1|AZZ40819.1|2061517_2062363_+|metal-ABC-transporter-permease
MSVILNFTNFTELVPLVSGSILAGVVLGVLAGLIGPMIHARDLAFAVHGTSELSFAGASVALFFGLSVTSGAVVGSLVAAVILGLLGVRAKDRNASIGIMLPFGMGIGVLFLSLYKGRSSNKFGLLTGQIVAVDGTQLTTLCLVAGLVALALAMIWRPLFFASADPAVAKARGVPMRTLSIVFMVLLGLTTAMAIQLVGALLVLSLLITPTAAAARVTARPTTLSLLSIAFAVTAAVGGILLSLGPGLPISPYVTTISFVIYLICLPIGALRRRLGWSRRG

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Crispr_ID: CP025570_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025570_7

2415483-2415564

Orphan

Consensus_repeat	Method
TACCCGGGTGGGGTGAGACGGCTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025570_7

>merge|CP025570|7|2415483-2415564|CRISPRCasFinder
TACCCGGGTGGGGTGAGACGGCTGCACATGGCAGCGGTGCCCGACCACACCCGGCCATATCCGGGTGGGGTGAGACGGCTGC

>CP025570|7|7|2415483-2415564|CRISPRCasFinder
TACCCGGGTGGGGTGAGACGGCTGC	ACATGGCAGCGGTGCCCGACCACACCCGGCCA
TATCCGGGTGGGGTGAGACGGCTGC

Protein	Signature genes	Signature genes Name	Protein_function
CP025570.1\|AZZ40165.1\|2405491_2406874_-\|amidase	unknown	unknown	gnl\|CDD\|223232
CP025570.1\|AZZ40857.1\|2412074_2413013_+\|DUF1648-domain-containing-protein	unknown	unknown	gnl\|CDD\|377929
CP025570.1\|AZZ40181.1\|2427651_2428611_+\|inosose-dehydratase	unknown	unknown	gnl\|CDD\|275172
CP025570.1\|AZZ40175.1\|2416716_2417667_+\|transketolase	unknown	unknown	gnl\|CDD\|226467
CP025570.1\|AZZ40167.1\|2408606_2408822_+\|hypothetical-protein	unknown	unknown	unknown
CP025570.1\|AZZ40172.1\|2414374_2414557_-\|hypothetical-protein	unknown	unknown	unknown
CP025570.1\|AZZ40858.1\|2420157_2421264_+\|alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176241
CP025570.1\|AZZ40173.1\|2414765_2415440_+\|DUF1707-domain-containing-protein	unknown	unknown	gnl\|CDD\|377959
CP025570.1\|AZZ40171.1\|2413216_2414149_-\|AEC-family-transporter	unknown	unknown	gnl\|CDD\|223751
CP025570.1\|AZZ40178.1\|2423213_2424233_+\|inositol-2-dehydrogenase	unknown	unknown	gnl\|CDD\|223745
CP025570.1\|AZZ40177.1\|2421420_2423142_+\|NAD-dependent-malic-enzyme	unknown	unknown	gnl\|CDD\|237414
CP025570.1\|AZZ40168.1\|2408905_2409988_-\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
CP025570.1\|AZZ40170.1\|2411601_2411961_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
CP025570.1\|AZZ40169.1\|2410165_2411293_+\|YihY/virulence-factor-BrkB-family-protein	unknown	unknown	gnl\|CDD\|377085
CP025570.1\|AZZ40166.1\|2407325_2407598_-\|hypothetical-protein	unknown	unknown	unknown
CP025570.1\|AZZ40179.1\|2424330_2425173_-\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
CP025570.1\|AZZ40180.1\|2425251_2426919_-\|sugar-porter-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340917
CP025570.1\|AZZ40176.1\|2417873_2419778_+\|3D-(3,5/4)-trihydroxycyclohexane-1,2-dione-acylhydrolase-(decyclizing)	unknown	unknown	gnl\|CDD\|275170
CP025570.1\|AZZ40174.1\|2415872_2416730_+\|transketolase	unknown	unknown	gnl\|CDD\|238970
CP025570.1\|AZZ40182.1\|2428663_2429683_+\|dehydrogenase	unknown	unknown	gnl\|CDD\|275173

Protein	Function_ID	Function_description	E-value
CP025570.1\|AZZ40165.1\|2405491_2406874_-\|amidase	gnl\|CDD\|223232	COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis].	8.32148e-114
CP025570.1\|AZZ40857.1\|2412074_2413013_+\|DUF1648-domain-containing-protein	gnl\|CDD\|377929	pfam07853, DUF1648, Protein of unknown function (DUF1648). Members of this family are hypothetical proteins expressed by either bacterial or archaeal species. Some of these are annotated as being transmembrane proteins, and in fact many of these sequences contain a high proportion of hydrophobic residues.	0.000410286
CP025570.1\|AZZ40173.1\|2414765_2415440_+\|DUF1707-domain-containing-protein	gnl\|CDD\|377959	pfam08044, DUF1707, Domain of unknown function (DUF1707). This domain is found in a variety of Actinomycetales proteins. All of the proteins containing this domain are hypothetical and probably membrane bound or associated. Currently, it is unclear to the function of this domain.	9.66889e-19
CP025570.1\|AZZ40182.1\|2428663_2429683_+\|dehydrogenase	gnl\|CDD\|275173	TIGR04380, hypothetical_protein_HOLDEFILI_04020, inositol 2-dehydrogenase. All members of the seed alignment for this model are known or predicted inositol 2-dehydrogenase sequences co-clustered with other enzymes for catabolism of myo-inositol or closely related compounds. Inositol 2-dehydrogenase catalyzes the first step in inositol catabolism. Members of this family may vary somewhat in their ranges of acceptable substrates and some may act on analogs to myo-inositol rather than myo-inositol per se. [Energy metabolism, Sugars].	1.17723e-81
CP025570.1\|AZZ40175.1\|2416716_2417667_+\|transketolase	gnl\|CDD\|226467	COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism].	5.89528e-110
CP025570.1\|AZZ40858.1\|2420157_2421264_+\|alcohol-dehydrogenase	gnl\|CDD\|176241	cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	4.05861e-147
CP025570.1\|AZZ40176.1\|2417873_2419778_+\|3D-(3,5/4)-trihydroxycyclohexane-1,2-dione-acylhydrolase-(decyclizing)	gnl\|CDD\|275170	TIGR04377, 3D-35/4-trihydroxycyclohexane-12-dione_hydrolase, 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase. Members of this protein family, 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase (iolD), represent one of eight enzymes in a pathway converting myo-inositol to acetyl-CoA. IolD hydrolyzes the cyclic molecule 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione to yield 5-deoxy-D-glucuronic acid. TPP is a cofactor. [Energy metabolism, Sugars].	0
CP025570.1\|AZZ40171.1\|2413216_2414149_-\|AEC-family-transporter	gnl\|CDD\|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	1.49409e-34
CP025570.1\|AZZ40178.1\|2423213_2424233_+\|inositol-2-dehydrogenase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	5.75905e-56
CP025570.1\|AZZ40177.1\|2421420_2423142_+\|NAD-dependent-malic-enzyme	gnl\|CDD\|237414	PRK13529, PRK13529, oxaloacetate-decarboxylating malate dehydrogenase.	0
CP025570.1\|AZZ40168.1\|2408905_2409988_-\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	5.69925e-71
CP025570.1\|AZZ40170.1\|2411601_2411961_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	9.85833e-27
CP025570.1\|AZZ40169.1\|2410165_2411293_+\|YihY/virulence-factor-BrkB-family-protein	gnl\|CDD\|377085	pfam03631, Virul_fac_BrkB, Virulence factor BrkB. This family acts as a virulence factor. In Bordetella pertussis, BrkB is essential for resistance to complement-dependent killing by serum. This family was originally predicted to be ribonuclease BN, but this prediction has since been shown to be incorrect.	2.63397e-19
CP025570.1\|AZZ40179.1\|2424330_2425173_-\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	3.50689e-18
CP025570.1\|AZZ40180.1\|2425251_2426919_-\|sugar-porter-family-MFS-transporter	gnl\|CDD\|340917	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily. This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.17379e-117
CP025570.1\|AZZ40181.1\|2427651_2428611_+\|inosose-dehydratase	gnl\|CDD\|275172	TIGR04379, myo-inositol_catabolism_protein, myo-inosose-2 dehydratase. Members of this family include the enzyme myo-inosose-2 dehydratase, product of the gene iolE, as found in inositol utilization cassettes in many species. [Energy metabolism, Sugars].	7.55704e-40
CP025570.1\|AZZ40174.1\|2415872_2416730_+\|transketolase	gnl\|CDD\|238970	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the pentose phosphate pathway and provides precursors for nucleotide, aromatic amino acid and vitamin biosynthesis. In addition, the enzyme plays a central role in the Calvin cycle in plants. Typically, TKs are homodimers. They require TPP and divalent cations, such as magnesium ions, for activity.	5.18511e-115

>CP025570.1|AZZ40173.1|2414765_2415440_+|DUF1707-domain-containing-protein
MTEMPPADNDPQMRISDADRARLADLLDDAYADGRLDQSEHGERMTAALDARTVSDIAPLVGDLAPLETVMPSAGAPAGMALVPTDRASVLPPIIPGTQQDRISTMIGDVNRGAGSILAVHTEISNGLGDVRLDLTQMSMAAHDVEVEIHSFMGDVILMVPEGIRVIDQTSRFLGDSKLHGMPPCPASAPTVTLTGFMALGDVRVYGPEHKSFLKKLRHWFGHD
>CP025570.1|AZZ40172.1|2414374_2414557_-|hypothetical-protein
MHHRMPGGVEAALRAWSLVDLARRPAEKVRGHKGLWALSLMTVNSVGVLPLVYLTRGRRR
>CP025570.1|AZZ40171.1|2413216_2414149_-|AEC-family-transporter
MTVIAENVIALAVVIAVGWLLRRTGAIGPQAGRVLSSFVYWAAAPALLFYSIAETPISQVVGRPLAVAAISGLVTAVLFALVARLFMKADVGQVVLGAMSASLNNAAYIGIPIGIYVLGHASYGVPVMIFQLGFLTPTFYVLSDLVGSHTRPTVSGVFTRIFTNPMVIAAMLGFLVSAFDLHPPSLVVTTSHLIGDAAPGTVLIALGASLVGQTFSMHSLDGRLAGLATGFKLVVQPLVGFGAGLALGLSGHALMAVTIMAGLPTAQNAFIAATRAKVGEKIAEATVVITTIGSLPLTVLTASLFLHLGA
>CP025570.1|AZZ40857.1|2412074_2413013_+|DUF1648-domain-containing-protein
MLLSAASGIVLLAIAAALAWSWRAELPDPVASHWGTGGSPDGFSSQGSLLATTSLVGLGCVVLFSAIGLFSGRAASTLRITAASTVWICGLLAILIAGSLAGQRGLTDAHQARGMDGVLLLSLLAPLVPAVLAALLIPADRRQPATGAVPASAPRVSLGASTRAVWLRRTSGGPGLLVSIAGVLVIVVASIITRMPVLLALAALLALLFATMFAFRVTVDSAGIEIRSALGWPRTRIGAAEVERAEAIHVSPFRDFGGWGWRVNHSGRTGIVLRSGPGLLVEQSGGWSLVVTIEDAEEGAALLNTMAARARS
>CP025570.1|AZZ40170.1|2411601_2411961_+|GntR-family-transcriptional-regulator
MIWTVDPTAPEPLYAQLAAQVHLALARGELAPGERLPSARQLAQSLDLNIHTVLHAFQLLRDEGVVELRRGRGAVITAHQGSAPTSAVHQALRHYLESGRAAGLPPEALITLVKEALRS
>CP025570.1|AZZ40169.1|2410165_2411293_+|YihY/virulence-factor-BrkB-family-protein
MADDNDTAPQVDTNPAPPEGPDLREAIHTTGAADRVKALVAWWKQTRLARALARYGNCYGGLLSSGMALTTMLSLTAVLTVAITVFMAVLGGDDQLRTSFIESLNTALPGVLKTESNPSGLVNPNSLVQSNASSVTGIIALVIATWSAVSLIGSLAQSIRSVFGLVALPENGLVKIGRNALGALGLGVGLLASAGLGIVVNVFGNWVNRMLHLGSGAGHILLVIATIAVSLVVDAAVLLLLVRFVAGVRVPKRDLVWGLALFAVASAVLRQLGTTAVGSVNGALLASATAVLTLILWINLVMRVLLLTCAWMANPPQAVAVNDPDAVHFTESPNFVTMSARHTLEWPHNAVTGGLQPVVREPDVPEDQDPLPEKD
>CP025570.1|AZZ40168.1|2408905_2409988_-|LacI-family-transcriptional-regulator
MVVGHDVGMAQVTLRDVAQAAGVSMATASRVLNGSARRPSEQISQRVRVAARQLGYVPNASAQALARSTSGLMGLVIQDLENPYFSAIASGFQRAAAAEGRLVLLSQTGGEEAATSAALRGMGAQRVDGVLVVGALNLDLSQQSGIRGLLSEISARGGGVVTVGQDHGVGTVLGPDDRAGGVSLAKAAVTAGYRRFAIVDDTARAPSAVARSEGFVAGLRAAGLSVEHSVRGAVAVNSGGDIGTALVRYLHSHGGGGPLCFFAITDAIAVAVLGRAQQAGVRVPEDLGIMGFDGIRAGRDCCPSLTTVDLPLPEMGRRAFTLLRHSGDVEDEEMVPVGWRVDGRSITVPGRFRRGGTTLR
>CP025570.1|AZZ40167.1|2408606_2408822_+|hypothetical-protein
MTRRPANADPKAKSPDCGYTYQRKGDRRITATATWQITWHAANQSGTVPMTRTSTRTLPVRELLAVNTRPS
>CP025570.1|AZZ40166.1|2407325_2407598_-|hypothetical-protein
MASVKRGSSEGVGVAEGVAVVGVGVVAVEMLVAGDGLASGSFPHAVRHDPITAMAIAVASTFRSIAASSQLTGRGARARHGICGQLPPLL
>CP025570.1|AZZ40165.1|2405491_2406874_-|amidase
MDQLTALQTAARITSGELSVPEVVDAALEQAHADTCNAWTFIDDEGARRRAVHLQERLADRDFHPGPLFGVPCPIKDLNECKGMPMEAGSAALAGKVSIHDDGVVTLLKGAGTIPIGKTTTPEFGLPCYTEPVGRPATVTPFDPTRMSGGSSGGAAAVVGAGEVPIAQGSDGGGSIRIPASCCGVVGLKPTRGRISSGPYGLDGPGLTTAGVLTRTVRDTAAALDVLSIGWPGDPFPAPRAAGSFLAGCEHPSPRLRIGVLTDPVISDDAEVHPAVAAALARTVRTLEDLGHIVEPASRPFGADAWNSFRCVWAVGAASIPVPAEAEDGLLPYTRWLRELGRGYSAVDLADAQAGIQRITRTTSELWDHFDVVVSPTLAQPPLLVGGLRDDSDPAGDFDAQCAFTPWTSVWNLTGRPAISLPLHTAVVDGVELPIGMMFGARMGQEDVLLALGCQLEDAR
>CP025570.1|AZZ40174.1|2415872_2416730_+|transketolase
MTVLSTQPSLTAEQRSDLEQTCREVRASILREIGSLGSGHIGGSLSMVEALVTIYSRHLRQTPATKDDPDRDRFVLSKGHSGPGYYATLAHFGYFDPAELLTLNQPGTRLPSHPDMNKTPGVDMTSGSLGQGFSAATGIAEAQRRRGKGARTYVILGDGESQEGQVWEAGLWAAQRKMDNLIAITDYNDMCIDGYVHDINDIAPLDEKWRAFRWFVQVIDGHDVDAIDRALTTAEQHQGQPSMIIMRTRKGHGVSFIEAAGVANHSMPITPEQVRAGVAELNEEN
>CP025570.1|AZZ40175.1|2416716_2417667_+|transketolase
MRRTDMPDQEMRAALGATLNKLMDEDERILLVNADLAGALGTSAVKKAHPDRCYDVGIQEANMTSFAAGLASSGFIPFIASFTAFTSRRACDQLMVSVAFAKQPVKVIGGDPGVSAQINGGTHMSFEDVAIMRSMAGFKVVEPADPHSMEVLLPQIAADPAPVYIRSFRKKRHNIYPEHPDLKLGRAEIVREGTDVSLIASGVELLEAMKAAEILDKEGVHAEVIDVHTVKPLDTETILASVGRTGAAVTCDNASVVGGLGDAVSEVVSEAHPVPITRIGVHDRVGQVGPLDFLLDEYHLSAPWIAKAARKVLAAK
>CP025570.1|AZZ40176.1|2417873_2419778_+|3D-(3,5/4)-trihydroxycyclohexane-1,2-dione-acylhydrolase-(decyclizing)
MSTTSFGPHDTVRLTVTQAIVKFLEVQQVERDGHSEPFFGGVLGIFGHGNCGGLGQALLEEAGKLRFIQGRNEQGMGDIAIGYAKMRNRLGAMAVTTSIGPGSANLVTAAGTATSNRLPLLLFPSDIFATRRTGSVLQQIEDERGTSTSTNDSLRSVSRFWERINRPEQLANALLGAMRTLTDPANTGAVTISLPQDVQAEAYDFPAALLAPRTWHVDRNRADVASLEAAAKAISKAEKPVIIAGGGVIYSDATEELKTFVEATGIPVGVTQSGKASLPFDHELAIGAIGSSGMKFANRVGNEADLVIGIGTRYTDFTSASNTLFQNPDATFVNINVFPFDAQKESAIPVVGDARESLKELTEKLKGWTVPADYRAHVAEVAQQQRDEVATLIAPEPGAKILSQTEVVGIVNEAAGPRDVVLNAAGSIPGDLHRLWKPGSPLGYGVEYGYSCMGYEIPAGLGMRIGDPSREIFTFIGDGSFLMYHQDVLTAIQEQEKIILLVVDNKGFGSINSLSVAVGSQGFETTFFHRGEDGRQDTSRPLEIDFAAILRGYGVTTYSVETADELREALDKAKAATEITAIYVPVDPVGRFGSEGFWEVATPEVSHIESSQKAHEVYMKGREQQRLYVEPATN
>CP025570.1|AZZ40858.1|2420157_2421264_+|alcohol-dehydrogenase
MKITGAVLEEIGRATPYASSRPISISQLDLDDPQQDEVLVRITASGICHSDLSVLNGARPRPVPMLLGHESTGIVEKLGPGVDDLEIGQHVTLAFLPRCGKCSGCLTDGKLPCIPGTAANTAGTLLGGGIRLHRDDKPVLHHLGVSGFADHAVVNRKSVVPVPAELPREIAAVLGCAVLTGGGAVINAGRPAPGDDIVVVGLGGVGMSAVLTAAAQGTGEVIAVDANPAKLTEAKEFGASQAFTPDEALSKGLKAPVVIEAAGHPKAFENAVLYTAPGGTTVTVGLPHPDARSEISPAALTGEARTIIGCYLGSAVPARDIPKYAQMWIDGKLHVEKLITSKIRLDQINEAMDTLAAGNAIRQVILFD
>CP025570.1|AZZ40177.1|2421420_2423142_+|NAD-dependent-malic-enzyme
MTSTQLHHDFEFGFDGHGEVLRIAARGSEVLANAVINRGTAFSAQERKALGLKGLLPSGVTTMEDQLKRVYVQYRAQRSPLDKYLFLNTLHDRNEVLYYRLLSEHIEEMLPIVYTPTIGQAIREYSHWYHRPRGVYLSIDDPEGIEDALLSMGHGPDEVDLIVATDSEGILGIGDQGVGGVAITIGKLAVYTAAAGIHPHRVLPVVLDTGTDNLDLLNDEVYLGVRHARVRGERYDAFIDRYVTTAHRLFPHAMLHWEDFGASNATRILNKYRDDYCTFNDDIQGTAAVVAAAVMSAVQVSGTPLADQRIVIHGAGTAGIGIARLLVQMMCQDGVDPETARSRVWGLGSRGLLREGIAVRDFQQPFARSAAELAGWTLDLPGHYELADVVRNVHPTILIGCSAQPGAFTEQIVRDMAQSCQRPIIMPLSNPTDRAEASPADLISWTSGRALVATGSPFPPVRYNGVSYRIAQANNALVFPGIGLGVTAARATRISDSMITAAVRTVARSVDPRPAGASLLPEISGLLPLSAQVGLAVALAAQKEGLATAPLDNPVQAIYDAIWRPDYPRVKAI
>CP025570.1|AZZ40178.1|2423213_2424233_+|inositol-2-dehydrogenase
MKRTVGIGVFGVGKMGQAHVRRINDSLRGARVVAIGDPAPEFAHKAAPGLDLPDDAVAESITEMCARPDVDGILVAAWDGEHEAAALAAIAAGKMVFCEKPLTPSVEGCRRIIEAEEKAGRRLLQIGFMRRYDTGYQQMKQVLDSGRIGDPLLAYCMHRNPSQGERFESHQIITQVMVHEFDISRWLFGEEITRVRVDRSRSTSKAPEGLIDPLTAVLWTESGVRINVEAVCFGRYAYDIRCSVLCEDGDVALPDQLAPTIRDASGVRHEIGTDWLDRFKDAYNIEIQSWIDSVIAGEQDGPSAWDGYAAQAICEAAAEAMGSGAEQPLDLMAKPAIYS
>CP025570.1|AZZ40179.1|2424330_2425173_-|sugar-phosphate-isomerase/epimerase
MWATCWTSAGPASPALADPRSPVNFRARVETAARIGYVGLGFIHDDLVVAEERYGLPTMKQMLDDNGLACEIEMLSGWWATGRQRELSDRTRLDMLRMAETLHPRELKIGPDEDDLPFEMAHWQEEFAALCGQAADVGTRVGIEFLPWTNIKDLATARELVEGAGHPGGGLVVDVWHTERFGTPASDLAEIPAERIIAVELSDAAAGIEGDLVHDTQCNRRFCGEGSFDLTGDVQALHRAGWRGPWGVEILSDRYREMPVQTGMMRAFRTAQLVVASALG
>CP025570.1|AZZ40180.1|2425251_2426919_-|sugar-porter-family-MFS-transporter
MTNTLDSVHKSEGRTPPPTPDEVRDLVEKTPRSGRRVPVALLAFVATLGSLLFGYDTGVISGALPYMLMPDAAGGMHLSSVQEGLVTGLLSLGAMVGAMFGGRLSDRYGRRHNIILLAIIFTFSTLGCVFAPNVGILFLFRFLLGCAVGGASATVPVYLAETAPQHLRGPLVAVDQFLIVTGQLVAYSMNAVLAHYAGGPSAVVDHDPTGKFPHGSTQSWDTLQSIANLTVMSGNGQTWRHMLVLATIPAVLLWIFMHFMPESSRWYAARSRYYEAIGALKRVRKDDDPTVTQEIDGMVDLHRVEAEDEQWSLRTVMRTPWTRRLLIIGSAVGVLDQLTGINTAMYYLPIILTAAGFSSASAITLNVVTGIFSFIGSAFGFLFVGKLMRRHVGMYQTSGVAVCLLSLAGVFFFGINKYAGADGAISGSIPAVLPWAVLIIISVFLFIKQSGTIQWIYVSEIFPAKIRGVAQGFAVGIQWLGNFVIAFTFPILMDHIGGGWTYLILGIINIGSLIFYIKIVPETKTRTLEELEERFRNKYGTGDATAQSVTAGHEK
>CP025570.1|AZZ40181.1|2427651_2428611_+|inosose-dehydratase
MERWGTADPPASAWPRARSYQSSKETRHMSDLASRIAAAPISWGVWEANGASGWTVPAAQYLQSVKDLGLKATEFGPEGYLPDDGDERKAMLDSYGLEGLGCFVPIMLFKEDYDPLPEVEHILDVYEKAGASTIICAAISGGKGYDDRPVLDEKGWDTLFTNLDRICAAARKHHIVPTLHHHMGTMIQTADEIDKLLERSDIGLCLDTGHATIAGIKPLDLARKHADRVTFVHLKDVHNEVAAKVQSGELSYMDSLSQGIFCPLGEGDAQIAEMIDTLEKAGYTGWYVMEQDAILSSGDDLPAAVADVKKSLDFLHTLH
>CP025570.1|AZZ40182.1|2428663_2429683_+|dehydrogenase
MSTSDPILGILGTGRIGADHARTISTLSGIGGILVADAVPESAQKIAQELGATAVSPDEIFDKVDGLVITTPTSTHAELIKKAVAKKIPTFTEKPIALDVPTTREVVDVVSDSDVLVQVGFMRRFNDGYANARKLLAEGAIGELRRGNVTMGDTPAPPESFIKFSGGINKDCLIHDADITRWVTGQRIEEVYEVGFSRGADYFARWDDIDEGGGVWTLADDSIVTFQTTRNNGAGYDIRLELFGTKDTISVGFDTYMPITSAEPGFTFEQAGDRFQAFYPRFIPAYKKEIGHFVQAMKDGSPSVATVNDALEALYVCDAMDLSRKEHRPVTVDEIRQAK

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Crispr_ID: CP025570_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025570_8

2581262-2581358

Orphan

Consensus_repeat	Method
GGGCTGGCGGGCCCACGCCCTTGAGGAACCCGGCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025570_8

>merge|CP025570|8|2581262-2581358|CRISPRCasFinder
GGGCTGGCGGGCCCACGCCCTTGAGGAACCCGGCCCCTCCCATAGTGCTGCGTGGGTGTCTAGGGCGGCGGGCCCACGCCCTTGAGGAACCCGGCCC

>CP025570|8|8|2581262-2581358|CRISPRCasFinder
GGGCTGGCGGGCCCACGCCCTTGAGGAACCCGGCCC	CTCCCATAGTGCTGCGTGGGTGTCT
AGGGCGGCGGGCCCACGCCCTTGAGGAACCCGGCCC

Protein	Signature genes	Signature genes Name	Protein_function
CP025570.1\|AZZ40278.1\|2579031_2579409_+\|septation-inhibitor-protein	unknown	unknown	gnl\|CDD\|377706
CP025570.1\|AZZ40281.1\|2585036_2585762_-\|Asp/Glu-racemase	unknown	unknown	gnl\|CDD\|226611
CP025570.1\|AZZ40275.1\|2575350_2577156_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
CP025570.1\|AZZ40878.1\|2570300_2570798_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366133
CP025570.1\|AZZ40877.1\|2569599_2570298_+\|DUF2662-domain-containing-protein	unknown	unknown	gnl\|CDD\|378850
CP025570.1\|AZZ40880.1\|2585766_2587323_-\|nitrate-reductase	unknown	unknown	gnl\|CDD\|271404
CP025570.1\|AZZ40285.1\|2593784_2594468_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
CP025570.1\|AZZ40283.1\|2590609_2591908_+\|allantoate-amidohydrolase	unknown	unknown	gnl\|CDD\|236456
CP025570.1\|AZZ40272.1\|2570800_2572330_+\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|223704
CP025570.1\|AZZ40274.1\|2573846_2575277_+\|cell-division-protein-FtsI	unknown	unknown	gnl\|CDD\|274573
CP025570.1\|AZZ40879.1\|2579563_2581051_-\|lysine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234778
CP025570.1\|AZZ40282.1\|2587867_2589229_+\|allantoinase-AllB	unknown	unknown	gnl\|CDD\|238640
CP025570.1\|AZZ40881.1\|2589413_2590613_+\|alanine--glyoxylate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223153
CP025570.1\|AZZ40279.1\|2581512_2582298_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376657
CP025570.1\|AZZ40284.1\|2592902_2593652_-\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667
CP025570.1\|AZZ40276.1\|2577254_2577893_-\|glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|181107
CP025570.1\|AZZ40882.1\|2592006_2592807_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
CP025570.1\|AZZ40277.1\|2578019_2578892_-\|DUF881-domain-containing-protein	unknown	unknown	gnl\|CDD\|377575
CP025570.1\|AZZ40280.1\|2582773_2583709_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379128
CP025570.1\|AZZ40273.1\|2572326_2573850_+\|FtsW/RodA/SpoVE-family-cell-cycle-protein	unknown	unknown	gnl\|CDD\|223843

Protein	Function_ID	Function_description	E-value
CP025570.1\|AZZ40278.1\|2579031_2579409_+\|septation-inhibitor-protein	gnl\|CDD\|377706	pfam06781, CrgA, Cell division protein CrgA. CrgA is a trans-membrane (TM) protein, first described in Streptomyces as being required for sporulation through the coordination of several aspects of reproductive growth. In Mtb (Mycobacterium tuberculosis ) CrgA is a central component of the divisome, and consists of 93 residues with two predicted TM helices (TM1: residues 29-51; and TM2: residues 66-88). CrgA facilitates the recruitment of the proteins essential for peptidoglycan synthesis to the divisome and also stabilizes the divisome. Reduced production of CrgA results in elongated cells and reduced growth rate, and loss of CrgA impairs peptidoglycan synthesis. CrgA has homologs in other actinomycetes.	2.09131e-29
CP025570.1\|AZZ40281.1\|2585036_2585762_-\|Asp/Glu-racemase	gnl\|CDD\|226611	COG4126, COG4126, Hydantoin racemase [Amino acid transport and metabolism].	7.76019e-64
CP025570.1\|AZZ40275.1\|2575350_2577156_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	3.84085e-125
CP025570.1\|AZZ40878.1\|2570300_2570798_+\|hypothetical-protein	gnl\|CDD\|366133	pfam00498, FHA, FHA domain. The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.	4.67532e-19
CP025570.1\|AZZ40877.1\|2569599_2570298_+\|DUF2662-domain-containing-protein	gnl\|CDD\|378850	pfam12401, DUF3662, Protein of unknown function (DUF2662). This domain family is found in bacteria, and is approximately 120 amino acids in length. The family is found in association with pfam00498.	4.10744e-47
CP025570.1\|AZZ40880.1\|2585766_2587323_-\|nitrate-reductase	gnl\|CDD\|271404	cd11555, SLC-NCS1sbd_u1, uncharacterized nucleobase-cation-symport-1 (NCS1) transporter subfamily; solute-binding domain. NCS1s are essential components of salvage pathways for nucleobases and related metabolites; their known substrates include allantoin, uracil, thiamine, and nicotinamide riboside. NCS1s belong to a superfamily which also contains the solute carrier 5 family sodium/glucose transporters (SLC5s), and solute carrier 6 family neurotransmitter transporters (SLC6s).	0
CP025570.1\|AZZ40285.1\|2593784_2594468_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	3.66036e-37
CP025570.1\|AZZ40283.1\|2590609_2591908_+\|allantoate-amidohydrolase	gnl\|CDD\|236456	PRK09290, PRK09290, allantoate amidohydrolase; Reviewed.	3.00988e-155
CP025570.1\|AZZ40272.1\|2570800_2572330_+\|serine/threonine-protein-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	1.33897e-56
CP025570.1\|AZZ40274.1\|2573846_2575277_+\|cell-division-protein-FtsI	gnl\|CDD\|274573	TIGR03423, pbp2_mrdA, penicillin-binding protein 2. Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	3.53007e-89
CP025570.1\|AZZ40879.1\|2579563_2581051_-\|lysine--tRNA-ligase	gnl\|CDD\|234778	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed.	0
CP025570.1\|AZZ40282.1\|2587867_2589229_+\|allantoinase-AllB	gnl\|CDD\|238640	cd01315, L-HYD_ALN, L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.	3.37834e-174
CP025570.1\|AZZ40881.1\|2589413_2590613_+\|alanine--glyoxylate-aminotransferase-family-protein	gnl\|CDD\|223153	COG0075, COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism].	3.67938e-118
CP025570.1\|AZZ40279.1\|2581512_2582298_+\|hypothetical-protein	gnl\|CDD\|376657	pfam01906, YbjQ_1, Putative heavy-metal-binding. From comparative structural analysis, this family is likely to be a heavy-metal binding domain. The domain oligomerizes as a pentamer. The domain is about 100 amino acids long and is found in prokaryotes.	4.27476e-24
CP025570.1\|AZZ40284.1\|2592902_2593652_-\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	8.78968e-24
CP025570.1\|AZZ40276.1\|2577254_2577893_-\|glutamine-amidotransferase	gnl\|CDD\|181107	PRK07765, PRK07765, aminodeoxychorismate/anthranilate synthase component II.	1.21871e-107
CP025570.1\|AZZ40882.1\|2592006_2592807_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	1.04779e-28
CP025570.1\|AZZ40277.1\|2578019_2578892_-\|DUF881-domain-containing-protein	gnl\|CDD\|377575	pfam05949, DUF881, Bacterial protein of unknown function (DUF881). This family consists of a series of hypothetical bacterial proteins. One of the family members YlxW from Bacillus subtilis is thought to be involved in cell division and sporulation.	2.14981e-52
CP025570.1\|AZZ40280.1\|2582773_2583709_-\|hypothetical-protein	gnl\|CDD\|379128	pfam13338, AbiEi_4, Transcriptional regulator, AbiEi antitoxin. AbiEi_4 is the cognate antitoxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	2.74538e-07
CP025570.1\|AZZ40273.1\|2572326_2573850_+\|FtsW/RodA/SpoVE-family-cell-cycle-protein	gnl\|CDD\|223843	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning].	3.81902e-81

>CP025570.1|AZZ40879.1|2579563_2581051_-|lysine--tRNA-ligase
MQVRLDKRSRILAEGGQAYPVDLTRDHTVPQIKAAYTGPDGELTLEPGEETDEVVTVGGRVVFVRNTGRLCFATIQDGFTETSNGERLQVMLSKAEIGEDGLKAWKADVDLGDFVWVQGRVVRSRRGELSVMASQWRMAAKALRPLPNLHTELSEESRVRRRYADLVVREESRSMVRTRAAITTAIRTSLHGDGFLEVETPTLQLVHGGAAARPFNTHLNAFDIDMSLRIALELYLKRAMVGGIDRVYEMGRVFRNEGIDSSHSAEFSMLEAYMSWGNQFTIAEVIKKIILTAADAVGIHQIETADGVIDLDGEWMWVKVYPGLSRALGEEVTLDTPVERLREIAAAHDVAVDPGFEAGKIVMELFGALVEPTLLQPTFVCDYPAIAQPLARPHRDDPRMVEAWDLIIGGMERGTGFSELVDPVIQRKVLTEQSLAAAAGDPEAMQLDEDFLEALEFGCPPMGGLGLGVDRLVMLFTNAGIRETILFPLLKPEQH
>CP025570.1|AZZ40278.1|2579031_2579409_+|septation-inhibitor-protein
MPESKVRKPAKSKATTKNPKKAPAVKKAAEEKAAKEAREAEAQTPEAKEAARKAEAKAERHRRLAVDRTWVPWVFIPLLVIGVLWLVVYYIAGGQIPFMMALGDWNILIGMGCMAASFAVATLWK
>CP025570.1|AZZ40277.1|2578019_2578892_-|DUF881-domain-containing-protein
MVDDEPEPDSAQPDSTESSESPRSSEDSESPGAGSQHTHSEGPRRRLSRLRWVRRGSLRGHLLTAGVLVLCGFMISWAALASQGRDLRPESESEDLAGLVRDQASHNADQVRQAAEMRAKVDRLSKVRDSDPKVARSIDALSPGAGLTAVSGPAIRVTLDDAPLDVKPDGVDQNLLVVHQQDIQMVVNVLWAGGAEAMTIQGQRVTSATGIKCVGNTVVLHGVPYAPPYRIEAMGDVAALQSALDSSEAVKVYKEYVTAYRLGWAVTDAGQVTMPAYKGTLAITHASPIK
>CP025570.1|AZZ40276.1|2577254_2577893_-|glutamine-amidotransferase
MSACRILVIDNYDSFVWNIVSYLGQIGAEVDVLRNDDPTFSTPGWHTRYDGILLSPGPGHPRDAGVCIDVLRNLSDTLPIFGVCLGMQAMAVAWGGRVDRAPEQLHGKVSKVLHNGTGVFTGLPSPLTVTRYHSLAADVDTLPECLETTAWSESGLIMGLRHRELPVEAVQFHPESVLSEHGYQMFGHWLAVCGDADAPARAAGLSPLMTAR
>CP025570.1|AZZ40275.1|2575350_2577156_+|serine/threonine-protein-kinase
MTAAGNWLGGRYELLSVIGRGGMAEVWKARDHRLGRDVAIKRLRADLASDDTFQARFQREAQSAAGLNHPNIVSVYDTGEAVDDATGLSVPYIVMELVEGHTLRDVLRDDRKILPARALEFTEGVLDALSYSHAAGIVHRDIKPANVMLTESGQVKVMDFGIARAVADTSATMTQTAAVIGTAQYLSPEQARGEKVDNRADIYATGCLLYELLVGRPPFIGDSPVSVAYQHVREIPAPPSSLDPEITPEMDAVTLKALAKAPADRYQTATQMHQDIERVLKGVPPLAPMVTRPANDPESAAATQVISPAAAADNVATAVRPVEPNPTGVDAYPVYQPGTGTQAVTRETQTPVSPATASRGEEPDTRRKKRWPIVLLVVLVAAVLGVGGYFGYQVFGSPSPSNSPSVAMVKVPAVTGMSEQGARSVLSNAGLRTKITHVRQGADTAGQVVSQNPAGGRSVAANSEVTITINDGPKKITVPSDLIGMTEAQATSALVSAGFAKTDINVTYQQTSEADEGTVISSSPNPGQQASDGDSITIVVAQAAPTATTTVTNNPQTSEPTRQDTGGGQDTGGGQPSPSGTSTGDDSVPASQPTGGQSGSS
>CP025570.1|AZZ40274.1|2573846_2575277_+|cell-division-protein-FtsI
MNRPIRFVAVFAAMMTFALLLNVTYSAAFRQPGLNNDPKNTRVRDAEFSQNRGDILVGGTAVARTVATDGQYKYLRTYPKGAEFAPITGYYSYYFGRTALEYSQNAQLTGTSDSQFLQRVTGTLSGRKPQGGSVITTINGRAQNAAWNGLAGKKGGVVAIDYTTGAILAMATSPSYDPNLLASHDLPATQKAWKSLNANSSLPMANRASKEIYPPGSTFKLVTASAALESGRYTPEGQVDTPSSIVLPQTTNRLGNEVDCGNGTVSLTEALDNSCNTAFAKIGMSLGQNALREQAKKYGFDSSIDSDVPVVPSLFPGDMNEAQVALSSIGQYDVAASPLQMAMVASGIANDGKLMTPYLTQSVRASNLQTVWRHHNTTLSHPTSRSTAESLQKMMVSVVENGTGGAAKIDGLTIGGKTGTAQTTKDASPYAWFVGFSENPHVAVAVFIESSDTERSEIAGGTLAGPIARSVIQAVR
>CP025570.1|AZZ40273.1|2572326_2573850_+|FtsW/RodA/SpoVE-family-cell-cycle-protein
MSSSEQSARPGTIVVHSKRRWVEFFLLIVAWGVGYSGYLLTEINMNGEVPANWKVVGGVWLGLIMVCHIVVRIFLPYADPMILPIVFTLNGLGLAMIHRIDLAGHPNPDRMTNQAIWTLGGIILWAVIVVWLKDHRKLQRFPYILFLAGLVLMLMPLLPGIGREINGARLWIGVGPFSFQPAELAKVLLVMAFASYLVDKRDVLSLAGHKIGPLTLPRARDLGPLAVMWGAAMAVIVWQNDLGTALLFFGLLVAMLYIATERVGWVVVGTLSFAVLAVVAYKMVGHVAVRVSGWLHPFDDFSDNFQIIMAQYGMAWGGLSGRGWGLGRPGLTPLSFSDYISASIGEELGATGLMAVIVLYGLLVARGLRAALSCRDSFGKLLAAGLSFVFGLQVFAIIGGVTRLLPLTGLTTPFMSQGGSSEVANWALVAILMLVSHQARRPADELQANLEEDPPPLMGTETGTARHAAGVGVGQGTEAAPYSGVGQNASADQDETVQNGVPGGARR
>CP025570.1|AZZ40272.1|2570800_2572330_+|serine/threonine-protein-phosphatase
MAFSLDIRCHSEIGMVRKNNQDSGYVSPTMLVVADGMGGAAAGDLASTVAVKQVARADSRRQGEEMLTLLAGAVSAANDELADLVAWDRSLEGMGTTFCGAMFDGAQLGLVHIGDSRGYLLRDGALSRMTHDDSWVQSLVDEGRITEQEAAVHPHRSLLLKVLNGQPQHTPDTKLVDVQLGDRVLFCSDGLCGFVSDPVIERIVSHHTLDDAMAMLVTEAHAAGAPDNVTVVLAEIVPHSDELEAMEPKIIGAAEITAVPDHEVTAPLPITAADMAEQTAPRPGTPRPGAPRHAARDDGTPLLFDSEAEESARYAPIDPDARHRLRPWLLTIAAVLVLALAGTLGSRAFLNRQFYVGEKAGTVAIYRGVPDSLLWLRLSSVVERTDINVGDLPRLYRSSVISTIDVDSLESAQATVAELRIGAENCRAVRERANTPGSASPTPGATTPDTSTPGFSTPGAASASTPAVSPSGSASASATPGTASEAAPTGSPSPSSGVSLPKVTEDDCS
>CP025570.1|AZZ40878.1|2570300_2570798_+|hypothetical-protein
MSELLVAILRIAYLALLWVFILFIGSTVRTDIFGRRVATRGGSSPAAAAGGSTPKRHRKRSRNQPAPGQLHILSGSRAGQIIPLADRILVGRGGDSNLPIDDDYASTHHAEFAQGVDGAWFVEDLRSTNGTYVNGQRIEELTRLTIGDEVRIGRTTMAVEAAGRR
>CP025570.1|AZZ40877.1|2569599_2570298_+|DUF2662-domain-containing-protein
MGILDKFENALEGAVNGVFAKAFRGEVEPVEIAGRLQRELDSEAQILTRDKKLVPNDFSVMLSSHDYEHLVPYTKTLNAEIVPALRDHATERRYVFNGPIHIRYELDESLPTGRFTVASGSLSGEESERTAVRRTPLVLEVNGVRHPLLPPGLVIGRGSEADLRINDPGISRRHAQIHVWTKGEGVGVSIEDLGSTNGVTVDGQRVTNTELRDGSRIEIGSTRMLVHSPSGM
>CP025570.1|AZZ40279.1|2581512_2582298_+|hypothetical-protein
MNSSRPPAQPPGWQQPSTGARPGPRPGPVPRPTPPTQRPDQSRRTPGVGASGVGASGVGASGPGNPGNPRASAYPPPQASAYPPPQPSAYPPPQPSAYPPPGGQPVTRTRPTSGQYRVQPGPPYPQTSGGATQQRSRSTTQAPAVPVPPMPLPEPVPITAGFPRHDIPVLTLDSFPGRQISGVLGAVEGCVTRSRELSPRADLSDILAVTRQDAVDAMVALALRVGADAVLGLRFDTSAISDGASEVCAYGTAVTLAPRST
>CP025570.1|AZZ40280.1|2582773_2583709_-|hypothetical-protein
MIPRTSVPASLSTAAAFQAGVVTRQQALSAGLTGEAVKSLLRAGRWDRLARGVYAIDGVDWDQMLWAGVLIGGPGSAVGGLAAAHIAGLVSRPEKIDIWAPRDQSYRRRLGPNPWVFHRGTRRPRGSPPHLGVEETILDLCADSDPDGISAWLALAITERRTTAARLADLLGDSPCLRNRKLIAECLEAVAGGSHSPLEVRYRRDVERCHGLPAGVRQKSVSEGTCSDVVYEEFGTITELDGRQGHRARGETRDAWRDSSHLALGLVTLRFGWADVVSRSCEVAARVAQVLRTRGWAGELRFCPDCPVHET
>CP025570.1|AZZ40281.1|2585036_2585762_-|Asp/Glu-racemase
MRIRVINPNTSASMTETIAASAHAAAAPDTVIEAVTPAMGPASIEGHYDEALAVPGVLTEVARGVADRVDGFVLACFGDPGMDAARELAQGRPVIGIAQAAMHVAALSARGFAVVTTLSRTAGRAWDLARSYGFGDRCREVLACEVPVLAVDSAEDMVADLAREALTHDGVEAIVLGCAGMAEMAARVSAETGAPVIDGVGAGVGLVETMVRIGVGGCARGEYAVPLEKSYTGLLEPFTIS
>CP025570.1|AZZ40880.1|2585766_2587323_-|nitrate-reductase
MVTTELAEGSGSSATTSSADVHVGSDYHPSLYNNDLAPLVKQKWNWYNIFAFWMSDVHSVGGYVTAGSLFAFGLASWQVFVCLIVGIVIVMLLANLVAKPSQVAGAPFPVISRAPFGVRGANIPATLRGLIAVAWYGIQTYLASDAIVVVALKLWPALKPYSDVSQHGFVGLSTIGWGAFILLWIGQAFVFWRGMNAIRKFIDWAGPAVYVVMIVLTVYLVYKAGTSNIDLTLGSIKYSGWGTVGAMFLATSIVVSYFSGPLLNFGDISRYGRTMSDVKRGNLLGLPINFTFFSILTVVCAAATVPVYGKLITDPIETVSRIDNTFAIVLGAMTFAIATVGINIVANFISPAFDFSHVAPQKISWRTGGMIAAVGSVLITPWNLYSSDEVIHYTLDVLASFTGPLFGILVCDYYLIRHQHVVVDDLYTMSSKGRYYYTKGVNPKAVIATVVGGVIALAIVLTPVEPFKTAANFSWFIGAGVGALVYYLNSRSSRVANLADKEINSHAHVPGATAGERA
>CP025570.1|AZZ40282.1|2587867_2589229_+|allantoinase-AllB
MADSSTVPSSSSSPLTISAARAVHNGATGPVTLTVQDGVITALTESETPGADIVIDPASVLLPGGVDTHVHLNEPGRTEWEGFATGTRAAAAGGVTTVLDMPLNSIPPTISPEALATKRQAAAGQLSVDLGYWGGAVPENLGHLQALWEEGVFGFKCFTLPSGVDEFQPLDPAQLHRAMTEIAGFNGLLIVHAEDAQCIEHAPSPHSKAYQDFLLSRPDAAETTAIKLVIDTMRDTGARVHLLHLSSAKGLDLVAAARAEGLPLTVETCPHYLCLAAEQIPDGTPEYKCCPPIRDQGNQDALWQGLIEGLIDIVVTDHSPTTRDNKYSGGGDLSTAWGGVAGVQVGYTAMLDAAPRHGVSLDRVTEWMSQGPARVMGIPGKGGIATGRDADLAVWSPTPQTIDAGALKHRNPISAWHGHTFDGTISKVWLRGMPLEPVVTGQTRPFGREIFRH
>CP025570.1|AZZ40881.1|2589413_2590613_+|alanine--glyoxylate-aminotransferase-family-protein
MGPGPINADPRVTRAMASALTGQFDPWMTDTMNETMALYRSVFNTTNEQTFLVDGTSRAAIEAALVSLVAPGQKVLIAVMGRFGLLLKEICERVGATVITIERAWGTVFTASEIEEALRIHRPVLFATVQGDTATTMNQPLEGLGQLCHSYGALCYVDATASIAGNTLLVDDWELDVVSAGLQKCLGGPSGSAPITISERAREVIEGRRHLEAGITDGSAGVGERIRSNYLDLAMLMDYWGPMRLNHHTESGPMLYAARECARLIDAEGIAQTVERHRLNGAAMAAGLQGLGLELFGDQHYRMNNVIGVKIPDGVPGDDLRAALLTDFAVEIGTSFGPLTGVVWRVGVMGYNARRDAVLTTLAALEAELHRFGHATTGSGVEAAMAYYDQNETHEEQPA
>CP025570.1|AZZ40283.1|2590609_2591908_+|allantoate-amidohydrolase
MSVTQTAGQHRTETTASAAARIMERCDELGTHSSVEGGIERVYLSPEHAEVDALAAGWMTEAGLRTWRDASGSRIGRLEGERPGLPALILGSHLDTVPDAGRYDGPLGVLLAIEVARRIAASDRRLPFALETYAFHEEEGVRFGATLLCSRALAGTWTDDLWELRDADGVSLAEAFGTFGLDPATIQDAARRHQDDGPKGVVGYLEAHIEQGSLLEEADLPLGVVTSIAGARRFEITVTGEARHAGGTPYSRRKDALAGASEIVVEIERIGKERDVIATVGQMSVEPGGVNVVPGTAVFSLDLRAETDQRRDDAWQLIRAALDEMATRRGLGVDINQIHEARSVTCAPQLMRAVETGIQQATGTTAEPMRIWSRAGHDAMAVAEMCDIAMMFIRCHDGISHAPDESVLTDDVAVALDAYEAAVWALADQYQN
>CP025570.1|AZZ40882.1|2592006_2592807_+|MurR/RpiR-family-transcriptional-regulator
MEARITTAFPELTGQERRAATTILEHLDDLATYSSADLSELSGVSRPTLSRLYRRLGYGSFGELRDEARHAGGVPIGPSQGVEAHLAQETRNISHLGRLADGRLEAAALSIMGAGDLVVIGYRNSYPVAMHLREQLAQLRPRTRLLPLPGQTVAEDMVGVGPGDTVVLVGLRRRTSGFDALLNLCVESRADIILIADNSALRYADRVTHLLPCSLDASGPFSSYAAAMSLVAMIANEASSIAGAQGERRVGLITEGYRQLDEIEHP
>CP025570.1|AZZ40284.1|2592902_2593652_-|sulfite-exporter-TauE/SafE-family-protein
MDTAQILLMVVAGAGAGLINTVVGSGSLITYPVMVMLGVPPVAANISNTVGLVPGSVAGSWGYRRELGRLRPLLLRLGAASVAGALIGAFLLTRLPAVTFSYAVPFLILGAALLVAFQPRIAAAMTPVEGTRWRPLLVVVFLAGIYGGYFSAAQGIILLGVLGLYLSADLQEQNALKNLLQTLVNIVAAVFFIVTGGVSWPFAGCVAVGSVIGALAGAWVARRLPAGFFRVFIVVFGVAMAVYMGWRAF
>CP025570.1|AZZ40285.1|2593784_2594468_-|GntR-family-transcriptional-regulator
MESLRDKVVSQLREQILSNDLEPGTRLRERTLSDLFGVSRVPVREALMVLEADLLVTSSRRADGSEGAGVEVTRFDRNDVAELFDAREALEPLVARLAARHRSEAQLEALRDQLETARRAAETGDNRAGALANTAYHGILVQACGSGLLAAVMAPLQTRIERLFRRTIVGRAPELAEDHTRMLAALADRQAETAELLARLHVVSTRAPSLALFTEQDEGQDAGRADD

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Crispr_ID: CP025570_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025570_10

2875427-2875519

Orphan

Consensus_repeat	Method
CCAGAACCCCCAGTTCCGCGAGTGAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025570_10

>merge|CP025570|10|2875427-2875519|CRISPRCasFinder
CCAGAACCCCCAGTTCCGCGAGTGAAATGTGCACCGACGAGCGCACCACACTCCTGGAAGAGCCTCCCAGACCCCCCAGTTCCGCGAGTGAAA

>CP025570|10|10|2875427-2875519|CRISPRCasFinder
CCAGAACCCCCAGTTCCGCGAGTGAAA	TGTGCACCGACGAGCGCACCACACTCCTGGAAGAGCCTC
CCAGACCCCCCAGTTCCGCGAGTGAAA

Protein	Signature genes	Signature genes Name	Protein_function
CP025570.1\|AZZ40474.1\|2875529_2877005_-\|deferrochelatase/peroxidase-EfeB	unknown	unknown	gnl\|CDD\|273606
CP025570.1\|AZZ40476.1\|2880909_2881290_-\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|238089
CP025570.1\|AZZ40473.1\|2874919_2875138_+\|hypothetical-protein	unknown	unknown	unknown
CP025570.1\|AZZ40466.1\|2868240_2869662_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340927
CP025570.1\|AZZ40472.1\|2874566_2874857_-\|30S-ribosomal-protein-S6	unknown	unknown	gnl\|CDD\|179034
CP025570.1\|AZZ40469.1\|2872925_2873372_-\|50S-ribosomal-protein-L9	unknown	unknown	gnl\|CDD\|234659
CP025570.1\|AZZ40468.1\|2871647_2872517_-\|undecaprenyl-diphosphate-phosphatase	unknown	unknown	gnl\|CDD\|237134
CP025570.1\|AZZ40479.1\|2885496_2886336_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
CP025570.1\|AZZ40470.1\|2873386_2873626_-\|30S-ribosomal-protein-S18	unknown	unknown	gnl\|CDD\|178997
CP025570.1\|AZZ40475.1\|2878487_2879495_-\|iron-transporter	unknown	unknown	gnl\|CDD\|272930
CP025570.1\|AZZ40465.1\|2867284_2868244_-\|hydroxyethylthiazole-kinase	unknown	unknown	gnl\|CDD\|236477
CP025570.1\|AZZ40917.1\|2886379_2886862_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|214874
CP025570.1\|AZZ40464.1\|2866617_2867274_-\|thiamine-phosphate-synthase	unknown	unknown	gnl\|CDD\|234590
CP025570.1\|AZZ40916.1\|2883731_2884529_-\|deoxyribonuclease-IV	unknown	unknown	gnl\|CDD\|179214
CP025570.1\|AZZ40477.1\|2881382_2883569_-\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|223953
CP025570.1\|AZZ40467.1\|2869796_2871419_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|237797
CP025570.1\|AZZ40915.1\|2877046_2878342_-\|peptidase-M75-family-protein	unknown	unknown	gnl\|CDD\|271139
CP025570.1\|AZZ40471.1\|2873767_2874421_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|236092
CP025570.1\|AZZ40478.1\|2884651_2885494_+\|KR-domain-containing-protein	unknown	unknown	gnl\|CDD\|223377
CP025570.1\|AZZ40480.1\|2886980_2888165_+\|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein	unknown	unknown	gnl\|CDD\|367067

Protein	Function_ID	Function_description	E-value
CP025570.1\|AZZ40474.1\|2875529_2877005_-\|deferrochelatase/peroxidase-EfeB	gnl\|CDD\|273606	TIGR01412, Probable_deferrochelatase/peroxidase_EfeN, Tat-translocated enzyme. This model represents a small family of proteins with a typical Tat (twin-arginine translocation) signal sequence, suggesting that the family is exported in a folded state, perhaps with a bound redox cofactor. Members of this family show homology to Dyp, a dye-decolorizing peroxidase from Geotrichum candidum that lacks any typical heme-binding site.	3.11147e-129
CP025570.1\|AZZ40476.1\|2880909_2881290_-\|rhodanese-like-domain-containing-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	5.11009e-15
CP025570.1\|AZZ40466.1\|2868240_2869662_-\|MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.75252e-32
CP025570.1\|AZZ40472.1\|2874566_2874857_-\|30S-ribosomal-protein-S6	gnl\|CDD\|179034	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed.	5.87561e-36
CP025570.1\|AZZ40469.1\|2872925_2873372_-\|50S-ribosomal-protein-L9	gnl\|CDD\|234659	PRK00137, rplI, 50S ribosomal protein L9; Reviewed.	3.37464e-55
CP025570.1\|AZZ40468.1\|2871647_2872517_-\|undecaprenyl-diphosphate-phosphatase	gnl\|CDD\|237134	PRK12554, PRK12554, undecaprenyl pyrophosphate phosphatase; Reviewed.	6.11322e-97
CP025570.1\|AZZ40479.1\|2885496_2886336_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	2.0824e-41
CP025570.1\|AZZ40470.1\|2873386_2873626_-\|30S-ribosomal-protein-S18	gnl\|CDD\|178997	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed.	6.65437e-31
CP025570.1\|AZZ40475.1\|2878487_2879495_-\|iron-transporter	gnl\|CDD\|272930	TIGR00145, Uncharacterized_protein_slr0964, FTR1 family protein. A characterized member from yeast acts as oxidase-coupled high affinity iron transporter. Note that the apparent member from E. coli K12-MG1655 has a frameshift by homology with member sequences from other species. [Unknown function, General].	6.07948e-47
CP025570.1\|AZZ40465.1\|2867284_2868244_-\|hydroxyethylthiazole-kinase	gnl\|CDD\|236477	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated.	1.28382e-68
CP025570.1\|AZZ40917.1\|2886379_2886862_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|214874	smart00871, AraC_E_bind, Bacterial transcription activator, effector binding domain. This domain is found in the probable effector binding domain of a number of different bacterial transcription activators.and is also present in some DNA gyrase inhibitors. The absence of a HTH motif in the DNA gyrase inhibitors is thought to indicate the fact that these do not bind DNA.	6.43861e-07
CP025570.1\|AZZ40464.1\|2866617_2867274_-\|thiamine-phosphate-synthase	gnl\|CDD\|234590	PRK00043, thiE, thiamine phosphate synthase.	2.33576e-61
CP025570.1\|AZZ40916.1\|2883731_2884529_-\|deoxyribonuclease-IV	gnl\|CDD\|179214	PRK01060, PRK01060, endonuclease IV; Provisional.	1.51802e-88
CP025570.1\|AZZ40477.1\|2881382_2883569_-\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|223953	COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism].	1.2795e-140
CP025570.1\|AZZ40467.1\|2869796_2871419_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl\|CDD\|237797	PRK14713, PRK14713, bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase.	0
CP025570.1\|AZZ40915.1\|2877046_2878342_-\|peptidase-M75-family-protein	gnl\|CDD\|271139	cd14656, Imelysin-like_EfeO, EfeO is a component of the EfeUOB operon. This family includes the EfeO domain, an essential component of the EfeUOB operon which is highly conserved in bacteria. However, its biochemical function is unknown. EfeO contains an N-terminal cupredoxin (CUP)-like domain and C-terminal imelysin-like domain that may bind iron. Algp7, a member of EfeO family protein from Sphingomonas sp. A1, is found to bind alginate at neutral pH, but does not contain the CUP domain, thus having a role that does not seem to be related to iron uptake. Some members of this family are fused to an N-terminal putative EfeU ion permease domain. The imelysin-like domain of this family also contains the GxHxxE sequence motif and a highly conserved functional site, suggesting a similar role to other imelysin family proteins containing the same motif.	4.25596e-67
CP025570.1\|AZZ40471.1\|2873767_2874421_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|236092	PRK07772, PRK07772, single-stranded DNA-binding protein; Provisional.	1.54676e-82
CP025570.1\|AZZ40478.1\|2884651_2885494_+\|KR-domain-containing-protein	gnl\|CDD\|223377	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only].	1.54891e-70
CP025570.1\|AZZ40480.1\|2886980_2888165_+\|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein	gnl\|CDD\|367067	pfam02388, FemAB, FemAB family. The femAB operon codes for two nearly identical approximately 50-kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan. These proteins are also considered as a factor influencing the level of methicillin resistance.	9.3755e-34

>CP025570.1|AZZ40473.1|2874919_2875138_+|hypothetical-protein
MPVTVAEWPRDAAVPTRDSQPHTLRQRTIDRQRLWCGGRLSLIATCAGSLGASTWDLVVGAWSLGLIAASVH
>CP025570.1|AZZ40472.1|2874566_2874857_-|30S-ribosomal-protein-S6
MRKYEVMILIDPTVDEHQVDSLMERYLKVVTDEKGSVDKVDVWGKRRLSYEIQKKSEAVYVVLDVTCKPSTVQEVDRLFAIDEKILRTKVMRPDVH
>CP025570.1|AZZ40471.1|2873767_2874421_-|single-stranded-DNA-binding-protein
MAGETSITVIGNLTADPELRFTPNGVPVANFTVASTPRTFDRQSNEWRDGEALFLNCSVWRNYAENVAESLSKGMRVVVQGNLKARSYEDRDGNRRTVHELDVQEVGPSLRYASAKVTRNPSGSGQGGQGGGWSGGGSGNQGGGSGNQGGNSGGWGQQPQGGNSGGWDNNQSGNQPGRQSGAPSGNQGNQGSYNQGADNRGGGVDPWAQAQSDEPPF
>CP025570.1|AZZ40470.1|2873386_2873626_-|30S-ribosomal-protein-S18
MAGPQRKPVNKKKVVPVKTVHIGEVDYKDIALLRKFISERGKIRARRVTGLTVQDQRKVAIAIKNARELALLPYASTAR
>CP025570.1|AZZ40469.1|2872925_2873372_-|50S-ribosomal-protein-L9
MKLILTAPVPKLGEPGDIVVVKDGYGRNYLLPHRFAIRWTRGAETQIGQIKRARDAKEIKTREQAEEVRGQLEDFKVQIPVQAGDTGRLFGAVTPADIVLAVKRAGGPALDKRSIEIDKPIKTIGTHSVGVKLHEAVKGHVAVETVAK
>CP025570.1|AZZ40468.1|2871647_2872517_-|undecaprenyl-diphosphate-phosphatase
MNWWQAVILGIVEGITEFLPVSSTGHLRIVEHLLGFKTQGMGITAFTAIIQVGAIAAAIIYFWKDIVRIVAAWFRGLFNKEGRDDPDYTLGWGIIIGSIPVAVVGLVFKDAIQGPLSSIWVVAGALIIWSFVMMAADRRTDLGRGMKDVTLVDATIIGCFQALSPLFPGISRSGATISAGLFRKFDRTTATRLSFFMGIPALVAAGIFEAITEASHITASTDILIDGGMGVIGWGPTIIATLVSLVVAYFSIAWLLKFVSSNKFTGFIWYRIVLGVVLLVLAFTGLMAV
>CP025570.1|AZZ40467.1|2869796_2871419_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MTSTIHPSVPGALPRVLSIAGTDPSGGAGTAADMKSITAAGGYGMTVVTCLVAQNTTGVRAIHTPPTDFLAAQLKAVGDDVVVDGVKTGMLGTAAIIETVEQWLDVHQPPVLVVDPVMVATSGDRLLEPDAEAAMSRFCRRATVITPNIPELAVLVDDDPAPDQDAAVAQARAWAADTGVAVIVKTGHLDSRLATNLWVGPEGPLAEVPCIRVDTTSTHGTGCSLSSALATRLAAGDDPATALVWTTEWLHEAILHGSELVVGHGHGPVDHSHRMRRLAAAGQPVAWLTADDVPATLVTPDQLDPTTDAPAAATPTAPEVPASAVPAAGPWTAALWRAGSDLARRIADCDLVTALVDGTLSPGIFSFYLGQDACYLAEYPRALAAVAASSTDPAEAADWAAGATASQVVEAELHRNWLGADSRPPAPSPVTRAYVDFLMARALGDDHPVGAAAVLPCYWLYAQVGASLPQVPDDHRYAGWLATYRDDAFITATATALGHVEKAMEVAAPAQRSAAARAFLISCRHELEFFEQALRMDGLR
>CP025570.1|AZZ40466.1|2868240_2869662_-|MFS-transporter
MPAAGRAALRAGVVGNWIDNVHVFLPLTALAPALAVIAGPGVAASTGAVIVIAMMLGRPLGGMILGRVSDRLGRTRTTRIAITGTACCALLIAAVPTHEVLGAGTIAVILVLRFLGGIFVAGEYSAAIPLAMEWSRPKRRGLMSGLILSMAPWAQGSIAFATAGLLVGLGPQRYAAWGWRLMFVVGALCSLGMLIYYRYRVVDAPVLHRQAASPAHTAHSGTAQASSTHPADSRTPQTGPAADRPVAGVREVLVGRWAPAFWQVFTLMSGLWLLTNAVVIMLTARLSTDAGLPATGVSVAMGVASVAQAILMAVAGHLSTLTGRRNLLVVWGAVAALAGPGLWWATVNSHTLGRAAILAAVLQVITVSAYGPVSAYLSERFPSEVRSTGYGMGYSLSLIVPALYPFYLPTLERAVGSHSAIMGLVALGGILVVIGALCGPRLGPSDIDAGIDEVAHASTRRRALRVPTSAGSR
>CP025570.1|AZZ40465.1|2867284_2868244_-|hydroxyethylthiazole-kinase
MSWGLHPDLAEDRDLAEVADVIARTRRRPPLVHCISAAVSMDLVANGLLAAGARPVMTETLQEAPAVTGIADILLVNFGTLSTDAMDGIPATVEAARRAGHLWVLDPTAIGAAPIRTRMARELLAGRPAVVRGNASEILALTGGGGGRGADSEDPVEDARGAAETVAGQTGGAVAVSGRVDLVVGAGEPRRVARGDPMMARVTGTGCLLGGLVAACLVASTPASTSDSTPGSPAIAASSGPGTDLAAESAPTTVPSASVPDPTRAATAALAATVWMNLAGELAGWRAARPGSFRMALLDALDEVGEAAERLDADRGLEI
>CP025570.1|AZZ40464.1|2866617_2867274_-|thiamine-phosphate-synthase
MTHTEPLDIRCYLVTSGTDLHTVETAARAAAAGAGMVQVRAKQLPTAELLALLTVVAEAVHRAAPATRVVVDDRADVAFAAMHAGAPVHGVHLGWDDLPVEAARAMLGPDAIIGLTTGTADLVRRAEALSEYIDYLGCGPFRPTPTKNSGRTPLGVEGYRPLVAETRLPMVAIGDVGPRDAPALAATGVAGVAVVRAIMTADHPEDVVHQILRAFPRP
>CP025570.1|AZZ40474.1|2875529_2877005_-|deferrochelatase/peroxidase-EfeB
MTEEHHSQPGPDPQQGRDAVGADPAAATSGGAGDGGSTSRESGSKGVPGSEGQAPAGRPMVSRRAMLAGSGGAAAVFGMGGFAWGHHRGAESAEAASADHSTRTSYPFRGDHQSGILTPAQDSMFTAAFDMRDVDVRLVRSLLRDWSTAAEQMMAGELVGGQPLANRQAAPTDTGDAWDYPPSGLTITFGVGRGLFVDEKGRDRFGLKSRMPKILAEGMPRFANEALQSGQSDGDLLIQACADDSQVAVHAIRNLTRIAFGRAVMRWTQVGYGRTSSTSKDQQTPRNLFGFKDGTNNIKAEDSAAQLNEHLWVQSGDDQGDWMAGGSYFVARKIRMFLEVWDRLRLGEQESTIGRDKMYGAPQSIAAPTENSQEFTAANFTAKQAGQTMIPTDSHIAVVAPEQNKGRRMLRRGYNYTDGIDSLGRLNAGLFFVAFLRDPRTNFYPILTRMTSSDALTEYLQHQASALFAIPPGIGAADQGVAEKLFKGVVA
>CP025570.1|AZZ40915.1|2877046_2878342_-|peptidase-M75-family-protein
MALATAAVTALLATGCTDNVDDAAAPAGSATAVRPVFTITDDGCSLSTSTLPGGVVTVTITNKGTVPNEFEILTENQLQIVGEKENIGPGVTTTFTTALEKGTYYTACKPNMVGALKGIQKITVTAGSGASVDSGTAALEKRAITNYTAYVRDQVGQLLTGTQAFTKAYLAGDVVRARELYPVARSHYERIEPTAEAFGIKEAGDLDTALDLRVQDLAADAGKKVTDPSVLKSWTGWHRIEADLFTKNGSAFKFASQADRRAAADRLDKDTQSLYNLVYGKITGASGAFKLNLADVVTGASSLLEEVATSKIVGEEETFSHTDLSDFKANVEGAEVAYGNVAALVKKADADLDAEVTQSFKDLNSLLAKYQDGKDSMGNVKYVDYSTIAAVQKDAGEAPKDSAYTKAQRTFSDEVNVASEALGKVPGTILH
>CP025570.1|AZZ40475.1|2878487_2879495_-|iron-transporter
MFVANLLIALREGFEASLVVGIIYAYLVKADRRDLIGKLWLGVGLAALVPLGIGAVLTWGPKTLTFQAQEIIGGVLSLVAVAMVTWMVFWMGENSRQLKGDIESDLTRSLNSHGSGWGVVWIAILAVGREGVETALFIWATVKSSVQTNTVATTAGVVTGLAAAVLLGWLVYRGAVRINMRAFFALTGGFLILVAAGIVSYGIGDLQEAGVLPGIMTHAWDLSAWLPAASSPVYWLYVVAVAMFQVNLAPTLAQTIAWWVYLIPVMTLFIAQVNGRLHGRARAANEGETPVLPEETPVPPGATPILPEGTPQLGSGAVPHPQPPQSPETTSRPLA
>CP025570.1|AZZ40476.1|2880909_2881290_-|rhodanese-like-domain-containing-protein
MGLRNFLANRGMPTGGIDLPAALTVLANGGVLVDVRTLPEYEAGHAPGAHLVEAKELVDDPFTAVYGDDPLAEPDPHFVLVCDTGFRSGHLVQAIRDKGYDADFLTGGLRAWREGGEILIPGPPRH
>CP025570.1|AZZ40477.1|2881382_2883569_-|long-chain-fatty-acid--CoA-ligase
MPVADISSRPGTDADPAAALLGSPVAGEDPAEVHLAHMFRDTVSRYAYRPASRVKVGEKWQIRTYADMGRRVEAISLALVEHGIARGDRVAIFSHNSPEWIEIDLAVMTVGAVPVPIYPTSTGEQVVHIIADAGVRIACVAGPAERDLVASIHDRTPSLKAVVVIDTPESGEDGRTGSGDAAEGDVAGTSPAAEGGVAGTSPAADSQDAVRNVPDGAHDSQDAAGGDLRVVALADVLSPQRTPERTAELKATVEERMSASSGDDVASLIYTSGTTGAPKGVMITHRAAMAQPAALDKFFTITPADHSLCFLPLSHALEWAWSMVLLTHGCLNTFVTNPKTIASMLVEVRPTLFVSVPKLYEQVMTVAHEKVSDSRLKTRLFNWSIGVGRRWWQASEDGRRPELGLRLRHKVADALVLKAIRTAVGGPKTVLAAGGAPLRQEVEEFFASVGLLVCQGYGLTEASPLVSFNSPGAHKFGTAGKPLVGSEIKEGAEGEILYRGPNIMKGYWNAPEATAQTIQDGWLHTGDVGHVDEDGYLVITDRLKDIIVTLNGKNISPQPIEGLLMADPLFEQAVILGDNRPCLTLLVKPSLPRVEELAEKLHLSLSGVDAMRSPELVEELRRRVADLTAKLPHQEQIRDLRVLWDDFTQDNGLLTPTLKVRRREVEKRFTEVIDEMYSRLAKLRKADHVRHDHEEAEHEKAGHGHAGDGHGHAGHGHGHGDGHRGTGE
>CP025570.1|AZZ40916.1|2883731_2884529_-|deoxyribonuclease-IV
MTEWTIGGSVDEAELVAQTRERGATLAQVMLGDPQSWRKPVVQHPGGAAGLREAAGEAGISVVVHSAYVINVASLNNRIRIPSRKLLQQTLAIAAEMGAIGVVVHGGHVREGEPIEKGQDNWRKAVDGLEMPVPLLIEDTAGGTHAMARQLERIRGTWEAIRTASGFESVGFCLDTCHAFAAGLDMTTLVDDIRAVTGRIDLVHANDSQGPAGSGRDRHANLGQGQIDPDELVRVIRAAGARVVVETPGGAQDQAADIAWLRERL
>CP025570.1|AZZ40478.1|2884651_2885494_+|KR-domain-containing-protein
MSSCLVTGGTSGIGREFVTQLAARGDDVIIAARDVDRMAAIKAEIEPRYGVSVETIRADLAVRADVDVVAARLEDPDRPVDLLVNNAGFGLHAKILDPETLPLQEKAFDVMCRAVLILSAAAGREMRDRGHGGIINVASSSAWINTGNYSAIKAWVLTFTEGLANELHGSGVKVEALCPGWVHTEFHSRAHVTATNLPEVVWVDAKTLVRESLSDLAKGKVVSVPTARWKAAIAVAGVVPRSTMRWLSRNLTSSRDKTDFPAPHPDGSSDHGPSGEAGER
>CP025570.1|AZZ40479.1|2885496_2886336_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MPIKPKVKDRGRYTSDINAVARQAANMLLLKPLVWRVTRVTVHGLENLGGLDGAYVITANHSSHLDTPLIFGSLPKRLSRYLSTGAAADYFFTNWWRAFTPVLFFNAFPVDRGKGRTRSGSAPHTHRGLAGSLLTDGIPLLIFAEGTRSRTGGMGTFKPGAAALAISRGVPVIPVALVGAFSAMPSDLQGLPKGRPPVHVVYGHPMQPAPGEIAHEFSERIRRQIITLHDQTARAYGMPTQADYARTLALGKAADKAEKAEKASTEKGDQRPPEPPSAG
>CP025570.1|AZZ40917.1|2886379_2886862_+|AraC-family-transcriptional-regulator
MRRVPGQTVLAVWRRVSIDDLDSWIDEATELMRTLAPVAAAQFVIYHDGLSTGHDGTVEVCQPIDPDSPGPADLPDGVVRRFESGRVEAYITLTKAELAYPEVDEFYQHLDDACTARGWRRTGPPRELYWADWDATAMDEPVCDVCFGIEESGIDRADLP
>CP025570.1|AZZ40480.1|2886980_2888165_+|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein
MSVIQVRQISPAQHLAFLQDWATPGSTAEETVSFLQTPAWAKVKQEWRSESIGIVRDGGPGGPELLGVGLVLYRQVPKLKRYLAYLPEGPVLDWTSPDLPEILDALRAHARRRHAFALRIGPTLPHRIWRKDTIKDAIADESITALSQAPADVTNLHATRLANQLRHLGWRPPKAAEGFAAGQPKFNFQLPLVTWTDGVRTRLSEDEVLAGMNQLWRRNIRKAAKKGVEVSRGGREDLAAFHKVYVETAGRDGFTPRPLDYFQTMWDALNGEDPDRMHLYLAHHEGDLVASTTWVHVGRHTWYSYGASTSAKRDVRGSNAIQWQMIRDSMAVDADVYDLRGITEGLEADDPELGLIKFKVGSGGEAVSYIGEWDLVIDPLLYKAFDWYMTRRSR

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Crispr_ID: CP025570_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025570_11

2897972-2898049

Orphan

Consensus_repeat	Method
GATGCAGGGAACTGGAGACCGCGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025570_11

>merge|CP025570|11|2897972-2898049|CRISPRCasFinder
GATGCAGGGAACTGGAGACCGCGGCATCCCCTCCCCCACCGCCCCAGACCACAGATGCAGGGAAATGGAGACCGCGGC

>CP025570|11|11|2897972-2898049|CRISPRCasFinder
GATGCAGGGAACTGGAGACCGCGGC	ATCCCCTCCCCCACCGCCCCAGACCACA
GATGCAGGGAAATGGAGACCGCGGC

Protein	Signature genes	Signature genes Name	Protein_function
CP025570.1\|AZZ40486.1\|2896831_2897935_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|226951
CP025570.1\|AZZ40491.1\|2905500_2905980_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
CP025570.1\|AZZ40920.1\|2910135_2910834_+\|acylneuraminate-cytidylyltransferase-family-protein	unknown	unknown	gnl\|CDD\|133006
CP025570.1\|AZZ40490.1\|2902753_2903716_-\|D-glycerate-dehydrogenase	unknown	unknown	gnl\|CDD\|240626
CP025570.1\|AZZ40918.1\|2890604_2891054_+\|DUF4186-domain-containing-protein	unknown	unknown	gnl\|CDD\|372733
CP025570.1\|AZZ40495.1\|2915228_2916188_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|133016
CP025570.1\|AZZ40492.1\|2906114_2906660_+\|polyisoprenoid-binding-protein	unknown	unknown	gnl\|CDD\|377274
CP025570.1\|AZZ40489.1\|2900855_2902481_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|274552
CP025570.1\|AZZ40493.1\|2908513_2909851_+\|sugar-transferase	unknown	unknown	gnl\|CDD\|274398
CP025570.1\|AZZ40494.1\|2910830_2913095_+\|acetylneuraminic-acid-synthetase	unknown	unknown	gnl\|CDD\|274655
CP025570.1\|AZZ40482.1\|2889306_2890530_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|170080
CP025570.1\|AZZ40483.1\|2891377_2892631_+\|aminotransferase	unknown	unknown	gnl\|CDD\|236095
CP025570.1\|AZZ40488.1\|2899503_2900859_-\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl\|CDD\|235412
CP025570.1\|AZZ40487.1\|2898248_2899502_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|236869
CP025570.1\|AZZ40485.1\|2896112_2896505_+\|hypothetical-protein	unknown	unknown	unknown
CP025570.1\|AZZ40919.1\|2894982_2896044_+\|ISAs1-family-transposase	unknown	unknown	gnl\|CDD\|379382
CP025570.1\|AZZ40480.1\|2886980_2888165_+\|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein	unknown	unknown	gnl\|CDD\|367067
CP025570.1\|AZZ40917.1\|2886379_2886862_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|214874
CP025570.1\|AZZ40481.1\|2888161_2889205_+\|alanine-racemase	unknown	unknown	gnl\|CDD\|143481
CP025570.1\|AZZ40484.1\|2892773_2894171_+\|FAD-binding-protein	unknown	unknown	gnl\|CDD\|273050

Protein	Function_ID	Function_description	E-value
CP025570.1\|AZZ40486.1\|2896831_2897935_+\|histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	7.57984e-19
CP025570.1\|AZZ40491.1\|2905500_2905980_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	8.78752e-10
CP025570.1\|AZZ40920.1\|2910135_2910834_+\|acylneuraminate-cytidylyltransferase-family-protein	gnl\|CDD\|133006	cd02513, CMP-NeuAc_Synthase, CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety. CMP-N-acetylneuraminic acid synthetase (CMP-NeuAc synthetase) or acylneuraminate cytidylyltransferase catalyzes the transfer the CMP moiety of CTP to the anomeric hydroxyl group of NeuAc in the presence of Mg++. It is the second to last step in the sialylation of the oligosaccharide component of glycoconjugates by providing the activated sugar-nucleotide cytidine 5'-monophosphate N-acetylneuraminic acid (CMP-Neu5Ac), the substrate for sialyltransferases. Eukaryotic CMP-NeuAc synthetases are predominantly located in the nucleus. The activated CMP-Neu5Ac diffuses from the nucleus into the cytoplasm.	1.92864e-85
CP025570.1\|AZZ40490.1\|2902753_2903716_-\|D-glycerate-dehydrogenase	gnl\|CDD\|240626	cd05301, GDH, D-glycerate dehydrogenase/hydroxypyruvate reductase (GDH). D-glycerate dehydrogenase (GDH, also known as hydroxypyruvate reductase, HPR) catalyzes the reversible reaction of (R)-glycerate + NAD+ to hydroxypyruvate + NADH + H+. In humans, HPR deficiency causes primary hyperoxaluria type 2, characterized by over-excretion of L-glycerate and oxalate in the urine, possibly due to an imbalance in competition with L-lactate dehydrogenase, another formate dehydrogenase (FDH)-like enzyme. GDH, like FDH and other members of the D-specific hydroxyacid dehydrogenase family that also includes L-alanine dehydrogenase and S-adenosylhomocysteine hydrolase, typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann-fold NAD+ binding form, despite often low sequence identity. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric.	4.31476e-148
CP025570.1\|AZZ40495.1\|2915228_2916188_+\|hypothetical-protein	gnl\|CDD\|133016	cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.	1.38606e-25
CP025570.1\|AZZ40492.1\|2906114_2906660_+\|polyisoprenoid-binding-protein	gnl\|CDD\|377274	pfam04264, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	1.09209e-54
CP025570.1\|AZZ40489.1\|2900855_2902481_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|274552	TIGR03377, glycerol3P_GlpA, glycerol-3-phosphate dehydrogenase, anaerobic, A subunit. Members of this protein family are the A subunit, product of the glpA gene, of a three-subunit, membrane-anchored, FAD-dependent anaerobic glycerol-3-phosphate dehydrogenase. [Energy metabolism, Anaerobic].	0
CP025570.1\|AZZ40493.1\|2908513_2909851_+\|sugar-transferase	gnl\|CDD\|274398	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Members of this family are generally found near other genes involved in the biosynthesis of a variety of exopolysaccharides. These proteins consist of two fused domains, an N-terminal hydrophobic domain of generally low conservation and a highly conserved C-terminal sugar transferase domain (pfam02397). Characterized and partially characterized members of this subfamily include Salmonella WbaP (originally RfbP), E. coli WcaJ, Methylobacillus EpsB, Xanthomonas GumD, Vibrio CpsA, Erwinia AmsG, Group B Streptococcus CpsE (originally CpsD), and Streptococcus suis Cps2E. Each of these is believed to act in transferring the sugar from, for instance, UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate as the first (priming) step in the synthesis of an oligosaccharide "block". This function is encoded in the C-terminal domain. The liposaccharide is believed to be subsequently transferred through a "flippase" function from the cytoplasmic to the periplasmic face of the inner membrane by the N-terminal domain. Certain closely related transferase enzymes, such as Sinorhizobium ExoY and Lactococcus EpsD, lack the N-terminal domain and are not found by this model.	3.25966e-143
CP025570.1\|AZZ40494.1\|2910830_2913095_+\|acetylneuraminic-acid-synthetase	gnl\|CDD\|274655	TIGR03569, ORF_8_similar_to_NeuB_family, N-acetylneuraminate synthase. This family is a subset of the pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.	3.20851e-107
CP025570.1\|AZZ40482.1\|2889306_2890530_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|170080	PRK09754, PRK09754, phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional.	2.09785e-71
CP025570.1\|AZZ40483.1\|2891377_2892631_+\|aminotransferase	gnl\|CDD\|236095	PRK07777, PRK07777, putative succinyldiaminopimelate transaminase DapC.	2.52754e-175
CP025570.1\|AZZ40488.1\|2899503_2900859_-\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl\|CDD\|235412	PRK05329, PRK05329, glycerol-3-phosphate dehydrogenase subunit GlpB.	9.51622e-130
CP025570.1\|AZZ40487.1\|2898248_2899502_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|236869	PRK11168, glpC, anaerobic glycerol-3-phosphate dehydrogenase subunit C.	0
CP025570.1\|AZZ40918.1\|2890604_2891054_+\|DUF4186-domain-containing-protein	gnl\|CDD\|372733	pfam13811, DUF4186, Domain of unknown function (DUF4186).	4.91519e-65
CP025570.1\|AZZ40919.1\|2894982_2896044_+\|ISAs1-family-transposase	gnl\|CDD\|379382	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated. This domain is frequently found N-terminal to the transposase, IS family DDE_Tnp_1, pfam01609 and its relatives.	3.68196e-17
CP025570.1\|AZZ40480.1\|2886980_2888165_+\|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein	gnl\|CDD\|367067	pfam02388, FemAB, FemAB family. The femAB operon codes for two nearly identical approximately 50-kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan. These proteins are also considered as a factor influencing the level of methicillin resistance.	9.3755e-34
CP025570.1\|AZZ40917.1\|2886379_2886862_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|214874	smart00871, AraC_E_bind, Bacterial transcription activator, effector binding domain. This domain is found in the probable effector binding domain of a number of different bacterial transcription activators.and is also present in some DNA gyrase inhibitors. The absence of a HTH motif in the DNA gyrase inhibitors is thought to indicate the fact that these do not bind DNA.	6.43861e-07
CP025570.1\|AZZ40481.1\|2888161_2889205_+\|alanine-racemase	gnl\|CDD\|143481	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase. This family includes predominantly bacterial alanine racemases (AR), some serine racemases (SerRac), and putative bifunctional enzymes containing N-terminal UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase (murF) and C-terminal AR domains. These proteins are fold type III PLP-dependent enzymes that play essential roles in peptidoglycan biosynthesis. AR catalyzes the interconversion between L- and D-alanine, which is an essential component of the peptidoglycan layer of bacterial cell walls. SerRac converts L-serine into its D-enantiomer (D-serine) for peptidoglycan synthesis. murF catalyzes the addition of D-Ala-D-Ala to UDPMurNAc-tripeptide, the final step in the synthesis of the cytoplasmic precursor of bacterial cell wall peptidoglycan. Members of this family contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. AR and other members of this family require dimer formation and the presence of the PLP cofactor for catalytic activity. Fungal ARs and eukaryotic serine racemases, which are fold types I and II PLP-dependent enzymes respectively, are excluded from this family.	8.4813e-16
CP025570.1\|AZZ40484.1\|2892773_2894171_+\|FAD-binding-protein	gnl\|CDD\|273050	TIGR00387, Glycolate_oxidase_subunit_glcD., glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity. [Energy metabolism, Other].	1.89746e-117

>CP025570.1|AZZ40486.1|2896831_2897935_+|histidine-kinase
MASHPDSLRRFLSGGSVEVGLAGLLFVMELIGHRPDDPASALPLAFLTCAGAGLAAWRTRIGAAISCLGFTAAAIVVPTVVTGSIYAPLVVILACAWRDDLWAGALASVWGYALSIWLSFRNTTTTAEDAQALLLWLGFYILPWILGLALRRVQRTERQRLTAQSEAQRRDTAAELHDNVTHDLAQIIARAQAARLGPEADRDVALADIVARGRRASAYLTNLMRVMRVGTPSPSVSLAEELQTGERTLAAAGFDMQIYTDCDVDAIAPEVSDVLGRIAREAFHNIAHHGDPTESCEATVRADKGRIAVSFTNATTTPYGGDGLGIIGMRERAELIGGTLRTRLSDGFWSLKLSVPITADSAEIPVP
>CP025570.1|AZZ40485.1|2896112_2896505_+|hypothetical-protein
MTGHDVTVCAPAPDKGYLPAAVTTISQIYDQSAHPEALPRLIHLTTTGTMSGGMHPMGLEHPPDLGAAPGRGLTPPTALGSAVGDSLSYSTQAWCAGTDVLDLQKLFGVEQYVQTPTMGKTLAALQKCRG
>CP025570.1|AZZ40919.1|2894982_2896044_+|ISAs1-family-transposase
MSRVPDPRKPRGTRYPLRGLLLLAVSAAMAGCRGFTATGEWAARLAASILEEFGLRAAPTESTLRKLFTHLDAAALDGQLCLYAWTRTTTIDERRIIAVDGKTLRGSRSAAARARHLVAALDHASGTVVAQEAVDAKSNEIPALPDLIAALGERAAGAVVTADALHTQTASAEAILTAGADYVFTVKANQPGLLAQLRAQPWKRVPAGHAETEKEHGRITRRALKVIQAPAGLGFPGAAQIAQLRRTVTRGTKKTVEVVYLITSASLPAASPARIAAWTRGHWGVENRLHWVRDVTFDEDRSQVRTGSAPQVMATIRNLAISIHRLDGATNIARATRHASWDPPATCTLLLTL
>CP025570.1|AZZ40484.1|2892773_2894171_+|FAD-binding-protein
MTTVRTETAAVTTEAMRAALPDLELDDSPATLEAHRTDRSSMPGSDHPLVVARPDSAEQVSALLSYANGHRIPVVPQGTLTGVAGAASASDGAILLDLTRMNRILRVSREDMIAVAQPGVIVSDLAEAAAAEGLFYAPDPASAQIATLGGTVATNAGGMRCIKYGVTRESVRSLEVVLADGTIMSTRPRTVKTVGGLDLTGLIVGSEGTLAVVTEVTVRLLAAPGPERGVLGLFPTLTEGLTATNRIASGARTPSRLEFMDGLCLQALRNHLPDADIPAGANAWVLAVTDAHDGAEEDLASYETTLLRAGASSVHRAATAEELEEVLSVRRRLQPSAKSLRGGSVEGDIGVPRSTLVDFAARMPGLSERFGVTIALGGHAGDGNLHPIVAFDPSDPGAHARAEEALRTLSRLAQEMGGTMSGEHGVGLEKLPFLDTEMAPEALNLQRRIKQLFDPNGILNPGKKF
>CP025570.1|AZZ40483.1|2891377_2892631_+|aminotransferase
MSGIADLPRPDQITGPWLRAAAGAGLLGDDQQVRPTIFTEMTAMANATGAINLGQGFPDDPGPQQVLDAARQAISDGLNQYPPLSGIPALRTAIAAHQQRFYGLDVDPDTEVQVTMGATEAMAATLLALVEPGDEVITIDPFYDAYAAIIGLTGGVQKYAPLTLDQDADGRPAGFSLDLDALRAAFTDRTRAIIVNTPHNPTGAMLNRDELTAILDAARAHGAYVITDEVYEHLAFSGAHLPMATLPGARGTVITISSAGKTFSVTGWKIGWITATPELITAIAAVKQYLTFAGGGPFQAGVAAGLGLPDDVLDAHRASLRVRRDLLSEGLRAAGFDVIEAAAGYFTVADAAPLGYQDGAALCREMPGRIGVAAVPVSAFTAAGGQNATRMASLVRFAHCKSTASIIEAADRLQKLH
>CP025570.1|AZZ40918.1|2890604_2891054_+|DUF4186-domain-containing-protein
MEAGPEAGVGAGGPADRRPEAVAATLARLRRSPFRSRFHLSASDRDYARAKGRQTIVDHARDLLRGRIGAAAPHNDGRQTPMRGHPVFIAQHATATCCRGCVAKWHGIAAGHQLTDVELDRLVEIVMAWIETELTAHPASPTPDHPTSD
>CP025570.1|AZZ40482.1|2889306_2890530_+|FAD-dependent-oxidoreductase
MSSPEHVVVIGGGLAGAKTVEALRDQGFEGAVTLIAAESDLPYERPPLSKGFLAGSAPFEEAVVHPQEWYTEHSIHLRRGERVTAIDPGAHQVSVDDGSTIGYDKLVLATGSVPRTASLPWAAAHGVHQLRTRADAEQIRAEFGKGRRLVIIGGGWIGLEVAATARGAETAVSVIEPSELPLARAIGPEIAAVYAEVHRAHGVDLRTSTTAAEILTEDGRATGVKLTDGEVIDADAVVIGIGAVPVVDLAESAGLAVDNGVLVDAGLRTSDPDIYAVGDIANQQHPRLGRRVRVEHWATALNQPAVAVTNLLGGSAEYDELPYFFSDQYNLGMEFYGDISTAARVVIRGDLEAREFVAFWLDSDKHITAVMNVNVWDVIDAVKPLILAGRVVDPAKVADPDVDYASL
>CP025570.1|AZZ40481.1|2888161_2889205_+|alanine-racemase
MSLVLHVDAGPWRAHQDLVVSGHQGIVPVAKGNGYGFGLGRLAAEATRMGLDLMAVGTAEEVPALRAAVAGQPGFQGDVVVLTPWRPDDPVADQVLHDPQVITTLSRVADVAAVARAHPGARVILEVLTSMSRYGMRPDEFAEAVAAAGPLEIVGWTIHLPMIGEHLGEATDLATAALAAHRAPLWVSHLSAGDLDRFRRTFDVPVRPRIGTELWLGAHGAMRYLASVQDVHEVTAGQQVGYWQRRAGRRHHHLAVVSGGTANGVAMQAPTAAATLRQVVQTLANGAMEAGRLALSPYSAGGHKLLFAEPPHMQASLLWVPSSVHVGDELEVTMRATTATPDQVILD
>CP025570.1|AZZ40480.1|2886980_2888165_+|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein
MSVIQVRQISPAQHLAFLQDWATPGSTAEETVSFLQTPAWAKVKQEWRSESIGIVRDGGPGGPELLGVGLVLYRQVPKLKRYLAYLPEGPVLDWTSPDLPEILDALRAHARRRHAFALRIGPTLPHRIWRKDTIKDAIADESITALSQAPADVTNLHATRLANQLRHLGWRPPKAAEGFAAGQPKFNFQLPLVTWTDGVRTRLSEDEVLAGMNQLWRRNIRKAAKKGVEVSRGGREDLAAFHKVYVETAGRDGFTPRPLDYFQTMWDALNGEDPDRMHLYLAHHEGDLVASTTWVHVGRHTWYSYGASTSAKRDVRGSNAIQWQMIRDSMAVDADVYDLRGITEGLEADDPELGLIKFKVGSGGEAVSYIGEWDLVIDPLLYKAFDWYMTRRSR
>CP025570.1|AZZ40917.1|2886379_2886862_+|AraC-family-transcriptional-regulator
MRRVPGQTVLAVWRRVSIDDLDSWIDEATELMRTLAPVAAAQFVIYHDGLSTGHDGTVEVCQPIDPDSPGPADLPDGVVRRFESGRVEAYITLTKAELAYPEVDEFYQHLDDACTARGWRRTGPPRELYWADWDATAMDEPVCDVCFGIEESGIDRADLP
>CP025570.1|AZZ40487.1|2898248_2899502_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MGVIEETFAGHEVARASLDNCVKCTICETVCPVAKANPLFTGPKYNGPQAERYRDGASVDHSLEWCDFCGICTLNCPQGVKIAELNEQAATKMKEQNGFPLRDRIIPETNMEGMLLSPMAPVANWALGLRPLRIVVEKVIKIHRDAPMPTAHTETLAKWLKHRKKPDITPTKGPVVFFQGCAGGYFETETSKKSIEVLEHLGYEVFVPKQSCCGLAKQSNGLFKGATKDILNLCDNLLKFGNELPVVSSSGSCIGMVKHEAHEVIGVDDPRLANVSVRSRDFCEFLMEEYRAGRLDASEFKEIDLTVPYHQPCQVKSQGMGFPAVQLMELIPGVKVIESNEPCCGIAGTYGLKAERYDTAQKIGKGVFEHMQNYNEGVGVCDTETCRWQIAKSSGVKIVHPVWLLHHALGLSDNLLK
>CP025570.1|AZZ40488.1|2899503_2900859_-|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MTATAITTTASWAGAQPHVVVIGAGIAGLTAALRLRRAGARVTQITKGLGGIQLGQGSIDILGYAPERVERPLDAISAFAAANPEHPYARIGVDAVRAGVDFLREAAGEDLLVGDPERNVNLPTAVGAVRPTALVTPTMTAGELHDGLKLVIIGVAQLKDFHPMLIAQNLERTTLPDGGKVSARAVMTDFEPRQNEYDATGLTFARALDDPKTRRTFAEGIKGFVNEGETVGLPAILGEEDHKAAFAEISQIIGAPVFEIPALPPCVPGMRLNEALVKAVKDARVEFILGTKVTGFTAGPDGRLASVTASTAGHRREIAADAFVLAAGGFESGALKLDSHGHVLDTVLGLPLTLPEGVDEDHLVTDKYWGVAQPLFKVGVAVDDSMKVVADGKPVYDNVYAAGGVIAGATRWQEKSGEGIALGSAVKATDAILASLPVVAASAASPTAERN
>CP025570.1|AZZ40489.1|2900855_2902481_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MRTMDADVVVIGGGATGAGVVRDVAMRGYSAVLLDKADLGQGTTGRYHGLLHSGGRYVVSDPESATECAEENEIVTRIHADAVEKTGGLFVVTPDDPMEFSDQWTEGATKAKVPWTEISVAEALRREPRLNPGLKRAFAVQDGTVDGWQMVWGAAHSAEDHGAQVLTYTEVTEIIREGDQVTAVVAHDLKKDEQVRISTRFVINTAGPWAGRIADLVGCHDVEVVPGRGIMIAMNHRLVNTVVNRCIYPADGDILVPVHTVSIIGTTDVKADDPQRLAVPRNEVQQMLDSGEALIPGFRDSRAVHAWAGARPLFKDKRVAATDTRHMSRGMSILDHGTRDGVNGIVSIIGGKLTTYRLMAKNVVDVMCEQLGDDRPCTTDKEAVPGSTEGHTYVITHRLHDNEVARAKHLETTPNKTPSRAAIDDQIICECELMSRKMLTDLLAEQPDSTFDDLRRQLRLGMGPCQGGFCSMRATGVALEEGAVDVERATGLLRLFLKNRWIGLWPILYGEQVRQTALDDWIFQGTFDVEHLPVPESEVEL
>CP025570.1|AZZ40490.1|2902753_2903716_-|D-glycerate-dehydrogenase
MARIIVTAPQMPEALDRLGDHDVVGGDHFMDRAELESLIGDADALLTSLSDPLDAEMLARADRLKVIGQCAAGFNNIDLDAATARGIVVTTTPGVLHEATADLAFGLMLMVTRRLGEAERLVRAGTPWRYDHTFMLGAGLQGATLGIVGLGQIGEAMARRGAAFGMDVVYDARHDHDVSAIDAVNSHTAATRRVDLQELLAVSDVVSLHCPLTPQTAHLIDADALATMKDSAFLINTARGGCVDEAALAHALQTGQIAGAGLDVYEHEPTITPALLEMDNVVALPHIGSATRQTRGVMSALAARNILEVLAGRPAETPVN
>CP025570.1|AZZ40491.1|2905500_2905980_-|MarR-family-transcriptional-regulator
MTEDTPWLDDHQQRVWRLWLDVTNGLPVLLNRQLARDTDLSLQDFEVLVCLSETEGHAMRVVALADAMHWERSRLSHQLTRMEKRGQVLRESCCTDGRGQLVRLSDKGWDAVVAAAPGHADLVRRVVFGGLDMDHLDELEQILNHIRDSLVEEREALES
>CP025570.1|AZZ40492.1|2906114_2906660_+|polyisoprenoid-binding-protein
MTNLSDLNGTYVLDPAHTRLGFVTRHAMVTKVRGSFTDFEGTASGNGSDPSSAKVAVSIATDSFTTGVADRDAHIKSGDFLETDKFPKITFASTSAAVKGDDLELTGDLTIKGITKPVTIPFEFDGEAKDPFGNIRVGFEGKVKISRKDFGITWNAALETGGVLVSDDVTLELEVSAIKQA
>CP025570.1|AZZ40493.1|2908513_2909851_+|sugar-transferase
MLIRTDAVAGFFPDDARTTHLLRPVALTIVPAWLLLIALFSGYQRKQLGAGTVEYRRVLNASLLTAGVLGISAYLLQYPMSRAFYFLMFAIGVPLVLLERYLMRRYLHRARRQGRFSRRVLIAGDCTHISDLVTVLNREPWLGYDIAGLLTTDAQACTKKVSIPTIGTPEQAVTAVREAQADIVIFTEGAYSRGRDFNRLARRLEGEKAELIVVPTLTDVSSTRMSVRPVAGIPLVHIDKPQAERAGTWLKRSFDIVGSLILIIAASPIVAVAALAIKLEDGGPVLFRQLRVGMGGRTFECLKLRSMVPDAEVIRAQQLADANEADGVLFKIKHDPRVTRVGHFLRRYSIDELPQFFNVLRGDMSLVGPRPALSKEVAAYKSLVRRRLDVRPGVTGLWQVSGRSDLSWDDAVRLDLYYVDNWSMIQDMTILMRTFKAIFSSSGAY
>CP025570.1|AZZ40920.1|2910135_2910834_+|acylneuraminate-cytidylyltransferase-family-protein
MTSTLAIIPARGGSKGIPHKNLKPLAGRPLLVWTIEQALATPGLDVCVSTEDSRIAEIARAAGARVIARPAELAQDTTATEPVVEHAISVLDAEGARPDQVMLLQATSPVRLPGTMARALKEFAASSADSMVGVVPEPIFIWQKDPKVKALYPFQNRPRRQEMTPDQLRYRETGSLYVTRTEVYETAHNRLGGRIELFVMDPVEGIDIDAQTDFALAEATIRQINTREHPTA
>CP025570.1|AZZ40494.1|2910830_2913095_+|acetylneuraminic-acid-synthetase
MIINRQTAPFTVFSGDSMLTALTKINNNQQGIVFCVDEHGLLAGSFSDGDFRRWITSTPHIDTTTAVIEAANTAPVKAPLGAATSTLSALFRPGVDVLPLVDERGHLAGLASQGAIGMRIGRHDIGAGHPALLVAEIGNNHQGDVTLAKRLVDLAKETGADAVKFQLRDLDALYRHSGGSTAGEDLGAQYTLNLLAKFSLNPDQMIEVLDHCKEVDIDAFATPWDLPSLSVLADYGVPALKIASADMTNHTLLRAAAAEHLPMLVSTGMSTEDEILGSVEVLRRAGAQFALLQCQSTYPAPYKDVNLRYMDRLAVLGNCPVGYSGHERGFHVPVAAVARGADIIEKHFTIDKTLEGNDHQVSLLPEEFAEMVSEIRDVETALGTDKARAVSTGEMMNRANLAKSLVTTRDLAAGDLITRDAVTVKSPGRGLQPNHLEELIGRTVHRDIPSGEFFYDTDLTDAVAHGRHYTFRRPWGLPVRYHDARKLLNNSDTNPDFLEFHLSYKDVEMSAEEIAGLFDNHKFDGMAYTVHCPDLYAGDFIINLASDDDAVWERSIVEVQRVIQIARDLAPWFDADKPPVVICTMGGFTADAFVDAEKRPAMYARIGQALERIDEDGVRLTSQTLPPYPWLMGGQQYHNLFMGLEDTVEFCHQYGRRLTFDLSHSKLAANFNHVPFSEYVEKLAPLSEHLHIVDAEGVDGEGPQIGEGEIDWPVTASQLDRLAPGVSFIPEIWQGHVNNGEGFWTALERLEKWF
>CP025570.1|AZZ40495.1|2915228_2916188_+|hypothetical-protein
MSPEAIPEVSVVIAYYKAAQWLPSQLDALAHQVNPPTFEVIIADNEGSTELPTVIADFRSILDIRIINATDRKGCGAARNRGVDHAHGNLIAFCDADDIVGPQWIRSLTDVLQARDVLATGPLRLDRINSEVVWRTTMGTTAGEPRDLPILQYPFTYLGYLPFAYGANIAMKRALFLNMSGFDETFVRGDEDVDLSWRAIESGIVLELAPSAVLDYRQRSTAAGVWRQRRNYARAQVDMWERSRLLDRPVNGMSLRWTLTETAKLIPRGLRAMSEGQAQRYSFAAHAGDVIGNLQGQWEQRVRPRLTARLPNLHRRPVQ

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Crispr_ID: CP025570_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025570_12

2907085-2907180

Orphan

Consensus_repeat	Method
ACGACGGGCTCCTCCCCACGGATGCAGGGAAAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025570_12

>merge|CP025570|12|2907085-2907180|CRISPRCasFinder
ACGACGGGCTCCTCCCCACGGATGCAGGGAAAAGTCCGACGGCGTGGGGGACGACTCCCGGGACGACGGGCTCCTCCCCACGGATGCAGGCAAAAG

>CP025570|12|12|2907085-2907180|CRISPRCasFinder
ACGACGGGCTCCTCCCCACGGATGCAGGGAAAAG	TCCGACGGCGTGGGGGACGACTCCCGGG
ACGACGGGCTCCTCCCCACGGATGCAGGCAAAAG

Protein	Signature genes	Signature genes Name	Protein_function
CP025570.1\|AZZ40486.1\|2896831_2897935_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|226951
CP025570.1\|AZZ40491.1\|2905500_2905980_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
CP025570.1\|AZZ40490.1\|2902753_2903716_-\|D-glycerate-dehydrogenase	unknown	unknown	gnl\|CDD\|240626
CP025570.1\|AZZ40495.1\|2915228_2916188_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|133016
CP025570.1\|AZZ40921.1\|2916241_2918371_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340833
CP025570.1\|AZZ40492.1\|2906114_2906660_+\|polyisoprenoid-binding-protein	unknown	unknown	gnl\|CDD\|377274
CP025570.1\|AZZ40496.1\|2918367_2919300_+\|glucosyltransferase	unknown	unknown	gnl\|CDD\|366154
CP025570.1\|AZZ40920.1\|2910135_2910834_+\|acylneuraminate-cytidylyltransferase-family-protein	unknown	unknown	gnl\|CDD\|133006
CP025570.1\|AZZ40494.1\|2910830_2913095_+\|acetylneuraminic-acid-synthetase	unknown	unknown	gnl\|CDD\|274655
CP025570.1\|AZZ40497.1\|2919064_2921170_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
CP025570.1\|AZZ40489.1\|2900855_2902481_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|274552
CP025570.1\|AZZ40488.1\|2899503_2900859_-\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl\|CDD\|235412
CP025570.1\|AZZ40487.1\|2898248_2899502_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|236869
CP025570.1\|AZZ40499.1\|2922365_2924306_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|132997
CP025570.1\|AZZ40500.1\|2924302_2925316_-\|prephenate-dehydrogenase	unknown	unknown	unknown
CP025570.1\|AZZ40498.1\|2921259_2922399_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340847
CP025570.1\|AZZ40485.1\|2896112_2896505_+\|hypothetical-protein	unknown	unknown	unknown
CP025570.1\|AZZ40919.1\|2894982_2896044_+\|ISAs1-family-transposase	unknown	unknown	gnl\|CDD\|379382
CP025570.1\|AZZ40493.1\|2908513_2909851_+\|sugar-transferase	unknown	unknown	gnl\|CDD\|274398
CP025570.1\|AZZ40484.1\|2892773_2894171_+\|FAD-binding-protein	unknown	unknown	gnl\|CDD\|273050

Protein	Function_ID	Function_description	E-value
CP025570.1\|AZZ40486.1\|2896831_2897935_+\|histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	7.57984e-19
CP025570.1\|AZZ40491.1\|2905500_2905980_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	8.78752e-10
CP025570.1\|AZZ40490.1\|2902753_2903716_-\|D-glycerate-dehydrogenase	gnl\|CDD\|240626	cd05301, GDH, D-glycerate dehydrogenase/hydroxypyruvate reductase (GDH). D-glycerate dehydrogenase (GDH, also known as hydroxypyruvate reductase, HPR) catalyzes the reversible reaction of (R)-glycerate + NAD+ to hydroxypyruvate + NADH + H+. In humans, HPR deficiency causes primary hyperoxaluria type 2, characterized by over-excretion of L-glycerate and oxalate in the urine, possibly due to an imbalance in competition with L-lactate dehydrogenase, another formate dehydrogenase (FDH)-like enzyme. GDH, like FDH and other members of the D-specific hydroxyacid dehydrogenase family that also includes L-alanine dehydrogenase and S-adenosylhomocysteine hydrolase, typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann-fold NAD+ binding form, despite often low sequence identity. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric.	4.31476e-148
CP025570.1\|AZZ40495.1\|2915228_2916188_+\|hypothetical-protein	gnl\|CDD\|133016	cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.	1.38606e-25
CP025570.1\|AZZ40921.1\|2916241_2918371_+\|glycosyltransferase	gnl\|CDD\|340833	cd03804, GT4_WbaZ-like, mannosyltransferase WbaZ and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. WbaZ in Salmonella enterica has been shown to possess mannosyltransferase activity.	5.45414e-80
CP025570.1\|AZZ40492.1\|2906114_2906660_+\|polyisoprenoid-binding-protein	gnl\|CDD\|377274	pfam04264, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	1.09209e-54
CP025570.1\|AZZ40496.1\|2918367_2919300_+\|glucosyltransferase	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	1.00378e-25
CP025570.1\|AZZ40920.1\|2910135_2910834_+\|acylneuraminate-cytidylyltransferase-family-protein	gnl\|CDD\|133006	cd02513, CMP-NeuAc_Synthase, CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety. CMP-N-acetylneuraminic acid synthetase (CMP-NeuAc synthetase) or acylneuraminate cytidylyltransferase catalyzes the transfer the CMP moiety of CTP to the anomeric hydroxyl group of NeuAc in the presence of Mg++. It is the second to last step in the sialylation of the oligosaccharide component of glycoconjugates by providing the activated sugar-nucleotide cytidine 5'-monophosphate N-acetylneuraminic acid (CMP-Neu5Ac), the substrate for sialyltransferases. Eukaryotic CMP-NeuAc synthetases are predominantly located in the nucleus. The activated CMP-Neu5Ac diffuses from the nucleus into the cytoplasm.	1.92864e-85
CP025570.1\|AZZ40497.1\|2919064_2921170_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	2.92265e-97
CP025570.1\|AZZ40489.1\|2900855_2902481_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|274552	TIGR03377, glycerol3P_GlpA, glycerol-3-phosphate dehydrogenase, anaerobic, A subunit. Members of this protein family are the A subunit, product of the glpA gene, of a three-subunit, membrane-anchored, FAD-dependent anaerobic glycerol-3-phosphate dehydrogenase. [Energy metabolism, Anaerobic].	0
CP025570.1\|AZZ40488.1\|2899503_2900859_-\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl\|CDD\|235412	PRK05329, PRK05329, glycerol-3-phosphate dehydrogenase subunit GlpB.	9.51622e-130
CP025570.1\|AZZ40487.1\|2898248_2899502_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|236869	PRK11168, glpC, anaerobic glycerol-3-phosphate dehydrogenase subunit C.	0
CP025570.1\|AZZ40499.1\|2922365_2924306_-\|hypothetical-protein	gnl\|CDD\|132997	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.	1.85224e-19
CP025570.1\|AZZ40498.1\|2921259_2922399_+\|hypothetical-protein	gnl\|CDD\|340847	cd03820, GT4_AmsD-like, amylovoran biosynthesis glycosyltransferase AmsD and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.	3.14484e-56
CP025570.1\|AZZ40493.1\|2908513_2909851_+\|sugar-transferase	gnl\|CDD\|274398	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Members of this family are generally found near other genes involved in the biosynthesis of a variety of exopolysaccharides. These proteins consist of two fused domains, an N-terminal hydrophobic domain of generally low conservation and a highly conserved C-terminal sugar transferase domain (pfam02397). Characterized and partially characterized members of this subfamily include Salmonella WbaP (originally RfbP), E. coli WcaJ, Methylobacillus EpsB, Xanthomonas GumD, Vibrio CpsA, Erwinia AmsG, Group B Streptococcus CpsE (originally CpsD), and Streptococcus suis Cps2E. Each of these is believed to act in transferring the sugar from, for instance, UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate as the first (priming) step in the synthesis of an oligosaccharide "block". This function is encoded in the C-terminal domain. The liposaccharide is believed to be subsequently transferred through a "flippase" function from the cytoplasmic to the periplasmic face of the inner membrane by the N-terminal domain. Certain closely related transferase enzymes, such as Sinorhizobium ExoY and Lactococcus EpsD, lack the N-terminal domain and are not found by this model.	3.25966e-143
CP025570.1\|AZZ40919.1\|2894982_2896044_+\|ISAs1-family-transposase	gnl\|CDD\|379382	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated. This domain is frequently found N-terminal to the transposase, IS family DDE_Tnp_1, pfam01609 and its relatives.	3.68196e-17
CP025570.1\|AZZ40494.1\|2910830_2913095_+\|acetylneuraminic-acid-synthetase	gnl\|CDD\|274655	TIGR03569, ORF_8_similar_to_NeuB_family, N-acetylneuraminate synthase. This family is a subset of the pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.	3.20851e-107
CP025570.1\|AZZ40484.1\|2892773_2894171_+\|FAD-binding-protein	gnl\|CDD\|273050	TIGR00387, Glycolate_oxidase_subunit_glcD., glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity. [Energy metabolism, Other].	1.89746e-117

>CP025570.1|AZZ40492.1|2906114_2906660_+|polyisoprenoid-binding-protein
MTNLSDLNGTYVLDPAHTRLGFVTRHAMVTKVRGSFTDFEGTASGNGSDPSSAKVAVSIATDSFTTGVADRDAHIKSGDFLETDKFPKITFASTSAAVKGDDLELTGDLTIKGITKPVTIPFEFDGEAKDPFGNIRVGFEGKVKISRKDFGITWNAALETGGVLVSDDVTLELEVSAIKQA
>CP025570.1|AZZ40491.1|2905500_2905980_-|MarR-family-transcriptional-regulator
MTEDTPWLDDHQQRVWRLWLDVTNGLPVLLNRQLARDTDLSLQDFEVLVCLSETEGHAMRVVALADAMHWERSRLSHQLTRMEKRGQVLRESCCTDGRGQLVRLSDKGWDAVVAAAPGHADLVRRVVFGGLDMDHLDELEQILNHIRDSLVEEREALES
>CP025570.1|AZZ40490.1|2902753_2903716_-|D-glycerate-dehydrogenase
MARIIVTAPQMPEALDRLGDHDVVGGDHFMDRAELESLIGDADALLTSLSDPLDAEMLARADRLKVIGQCAAGFNNIDLDAATARGIVVTTTPGVLHEATADLAFGLMLMVTRRLGEAERLVRAGTPWRYDHTFMLGAGLQGATLGIVGLGQIGEAMARRGAAFGMDVVYDARHDHDVSAIDAVNSHTAATRRVDLQELLAVSDVVSLHCPLTPQTAHLIDADALATMKDSAFLINTARGGCVDEAALAHALQTGQIAGAGLDVYEHEPTITPALLEMDNVVALPHIGSATRQTRGVMSALAARNILEVLAGRPAETPVN
>CP025570.1|AZZ40489.1|2900855_2902481_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MRTMDADVVVIGGGATGAGVVRDVAMRGYSAVLLDKADLGQGTTGRYHGLLHSGGRYVVSDPESATECAEENEIVTRIHADAVEKTGGLFVVTPDDPMEFSDQWTEGATKAKVPWTEISVAEALRREPRLNPGLKRAFAVQDGTVDGWQMVWGAAHSAEDHGAQVLTYTEVTEIIREGDQVTAVVAHDLKKDEQVRISTRFVINTAGPWAGRIADLVGCHDVEVVPGRGIMIAMNHRLVNTVVNRCIYPADGDILVPVHTVSIIGTTDVKADDPQRLAVPRNEVQQMLDSGEALIPGFRDSRAVHAWAGARPLFKDKRVAATDTRHMSRGMSILDHGTRDGVNGIVSIIGGKLTTYRLMAKNVVDVMCEQLGDDRPCTTDKEAVPGSTEGHTYVITHRLHDNEVARAKHLETTPNKTPSRAAIDDQIICECELMSRKMLTDLLAEQPDSTFDDLRRQLRLGMGPCQGGFCSMRATGVALEEGAVDVERATGLLRLFLKNRWIGLWPILYGEQVRQTALDDWIFQGTFDVEHLPVPESEVEL
>CP025570.1|AZZ40488.1|2899503_2900859_-|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MTATAITTTASWAGAQPHVVVIGAGIAGLTAALRLRRAGARVTQITKGLGGIQLGQGSIDILGYAPERVERPLDAISAFAAANPEHPYARIGVDAVRAGVDFLREAAGEDLLVGDPERNVNLPTAVGAVRPTALVTPTMTAGELHDGLKLVIIGVAQLKDFHPMLIAQNLERTTLPDGGKVSARAVMTDFEPRQNEYDATGLTFARALDDPKTRRTFAEGIKGFVNEGETVGLPAILGEEDHKAAFAEISQIIGAPVFEIPALPPCVPGMRLNEALVKAVKDARVEFILGTKVTGFTAGPDGRLASVTASTAGHRREIAADAFVLAAGGFESGALKLDSHGHVLDTVLGLPLTLPEGVDEDHLVTDKYWGVAQPLFKVGVAVDDSMKVVADGKPVYDNVYAAGGVIAGATRWQEKSGEGIALGSAVKATDAILASLPVVAASAASPTAERN
>CP025570.1|AZZ40487.1|2898248_2899502_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MGVIEETFAGHEVARASLDNCVKCTICETVCPVAKANPLFTGPKYNGPQAERYRDGASVDHSLEWCDFCGICTLNCPQGVKIAELNEQAATKMKEQNGFPLRDRIIPETNMEGMLLSPMAPVANWALGLRPLRIVVEKVIKIHRDAPMPTAHTETLAKWLKHRKKPDITPTKGPVVFFQGCAGGYFETETSKKSIEVLEHLGYEVFVPKQSCCGLAKQSNGLFKGATKDILNLCDNLLKFGNELPVVSSSGSCIGMVKHEAHEVIGVDDPRLANVSVRSRDFCEFLMEEYRAGRLDASEFKEIDLTVPYHQPCQVKSQGMGFPAVQLMELIPGVKVIESNEPCCGIAGTYGLKAERYDTAQKIGKGVFEHMQNYNEGVGVCDTETCRWQIAKSSGVKIVHPVWLLHHALGLSDNLLK
>CP025570.1|AZZ40486.1|2896831_2897935_+|histidine-kinase
MASHPDSLRRFLSGGSVEVGLAGLLFVMELIGHRPDDPASALPLAFLTCAGAGLAAWRTRIGAAISCLGFTAAAIVVPTVVTGSIYAPLVVILACAWRDDLWAGALASVWGYALSIWLSFRNTTTTAEDAQALLLWLGFYILPWILGLALRRVQRTERQRLTAQSEAQRRDTAAELHDNVTHDLAQIIARAQAARLGPEADRDVALADIVARGRRASAYLTNLMRVMRVGTPSPSVSLAEELQTGERTLAAAGFDMQIYTDCDVDAIAPEVSDVLGRIAREAFHNIAHHGDPTESCEATVRADKGRIAVSFTNATTTPYGGDGLGIIGMRERAELIGGTLRTRLSDGFWSLKLSVPITADSAEIPVP
>CP025570.1|AZZ40485.1|2896112_2896505_+|hypothetical-protein
MTGHDVTVCAPAPDKGYLPAAVTTISQIYDQSAHPEALPRLIHLTTTGTMSGGMHPMGLEHPPDLGAAPGRGLTPPTALGSAVGDSLSYSTQAWCAGTDVLDLQKLFGVEQYVQTPTMGKTLAALQKCRG
>CP025570.1|AZZ40919.1|2894982_2896044_+|ISAs1-family-transposase
MSRVPDPRKPRGTRYPLRGLLLLAVSAAMAGCRGFTATGEWAARLAASILEEFGLRAAPTESTLRKLFTHLDAAALDGQLCLYAWTRTTTIDERRIIAVDGKTLRGSRSAAARARHLVAALDHASGTVVAQEAVDAKSNEIPALPDLIAALGERAAGAVVTADALHTQTASAEAILTAGADYVFTVKANQPGLLAQLRAQPWKRVPAGHAETEKEHGRITRRALKVIQAPAGLGFPGAAQIAQLRRTVTRGTKKTVEVVYLITSASLPAASPARIAAWTRGHWGVENRLHWVRDVTFDEDRSQVRTGSAPQVMATIRNLAISIHRLDGATNIARATRHASWDPPATCTLLLTL
>CP025570.1|AZZ40484.1|2892773_2894171_+|FAD-binding-protein
MTTVRTETAAVTTEAMRAALPDLELDDSPATLEAHRTDRSSMPGSDHPLVVARPDSAEQVSALLSYANGHRIPVVPQGTLTGVAGAASASDGAILLDLTRMNRILRVSREDMIAVAQPGVIVSDLAEAAAAEGLFYAPDPASAQIATLGGTVATNAGGMRCIKYGVTRESVRSLEVVLADGTIMSTRPRTVKTVGGLDLTGLIVGSEGTLAVVTEVTVRLLAAPGPERGVLGLFPTLTEGLTATNRIASGARTPSRLEFMDGLCLQALRNHLPDADIPAGANAWVLAVTDAHDGAEEDLASYETTLLRAGASSVHRAATAEELEEVLSVRRRLQPSAKSLRGGSVEGDIGVPRSTLVDFAARMPGLSERFGVTIALGGHAGDGNLHPIVAFDPSDPGAHARAEEALRTLSRLAQEMGGTMSGEHGVGLEKLPFLDTEMAPEALNLQRRIKQLFDPNGILNPGKKF
>CP025570.1|AZZ40493.1|2908513_2909851_+|sugar-transferase
MLIRTDAVAGFFPDDARTTHLLRPVALTIVPAWLLLIALFSGYQRKQLGAGTVEYRRVLNASLLTAGVLGISAYLLQYPMSRAFYFLMFAIGVPLVLLERYLMRRYLHRARRQGRFSRRVLIAGDCTHISDLVTVLNREPWLGYDIAGLLTTDAQACTKKVSIPTIGTPEQAVTAVREAQADIVIFTEGAYSRGRDFNRLARRLEGEKAELIVVPTLTDVSSTRMSVRPVAGIPLVHIDKPQAERAGTWLKRSFDIVGSLILIIAASPIVAVAALAIKLEDGGPVLFRQLRVGMGGRTFECLKLRSMVPDAEVIRAQQLADANEADGVLFKIKHDPRVTRVGHFLRRYSIDELPQFFNVLRGDMSLVGPRPALSKEVAAYKSLVRRRLDVRPGVTGLWQVSGRSDLSWDDAVRLDLYYVDNWSMIQDMTILMRTFKAIFSSSGAY
>CP025570.1|AZZ40920.1|2910135_2910834_+|acylneuraminate-cytidylyltransferase-family-protein
MTSTLAIIPARGGSKGIPHKNLKPLAGRPLLVWTIEQALATPGLDVCVSTEDSRIAEIARAAGARVIARPAELAQDTTATEPVVEHAISVLDAEGARPDQVMLLQATSPVRLPGTMARALKEFAASSADSMVGVVPEPIFIWQKDPKVKALYPFQNRPRRQEMTPDQLRYRETGSLYVTRTEVYETAHNRLGGRIELFVMDPVEGIDIDAQTDFALAEATIRQINTREHPTA
>CP025570.1|AZZ40494.1|2910830_2913095_+|acetylneuraminic-acid-synthetase
MIINRQTAPFTVFSGDSMLTALTKINNNQQGIVFCVDEHGLLAGSFSDGDFRRWITSTPHIDTTTAVIEAANTAPVKAPLGAATSTLSALFRPGVDVLPLVDERGHLAGLASQGAIGMRIGRHDIGAGHPALLVAEIGNNHQGDVTLAKRLVDLAKETGADAVKFQLRDLDALYRHSGGSTAGEDLGAQYTLNLLAKFSLNPDQMIEVLDHCKEVDIDAFATPWDLPSLSVLADYGVPALKIASADMTNHTLLRAAAAEHLPMLVSTGMSTEDEILGSVEVLRRAGAQFALLQCQSTYPAPYKDVNLRYMDRLAVLGNCPVGYSGHERGFHVPVAAVARGADIIEKHFTIDKTLEGNDHQVSLLPEEFAEMVSEIRDVETALGTDKARAVSTGEMMNRANLAKSLVTTRDLAAGDLITRDAVTVKSPGRGLQPNHLEELIGRTVHRDIPSGEFFYDTDLTDAVAHGRHYTFRRPWGLPVRYHDARKLLNNSDTNPDFLEFHLSYKDVEMSAEEIAGLFDNHKFDGMAYTVHCPDLYAGDFIINLASDDDAVWERSIVEVQRVIQIARDLAPWFDADKPPVVICTMGGFTADAFVDAEKRPAMYARIGQALERIDEDGVRLTSQTLPPYPWLMGGQQYHNLFMGLEDTVEFCHQYGRRLTFDLSHSKLAANFNHVPFSEYVEKLAPLSEHLHIVDAEGVDGEGPQIGEGEIDWPVTASQLDRLAPGVSFIPEIWQGHVNNGEGFWTALERLEKWF
>CP025570.1|AZZ40495.1|2915228_2916188_+|hypothetical-protein
MSPEAIPEVSVVIAYYKAAQWLPSQLDALAHQVNPPTFEVIIADNEGSTELPTVIADFRSILDIRIINATDRKGCGAARNRGVDHAHGNLIAFCDADDIVGPQWIRSLTDVLQARDVLATGPLRLDRINSEVVWRTTMGTTAGEPRDLPILQYPFTYLGYLPFAYGANIAMKRALFLNMSGFDETFVRGDEDVDLSWRAIESGIVLELAPSAVLDYRQRSTAAGVWRQRRNYARAQVDMWERSRLLDRPVNGMSLRWTLTETAKLIPRGLRAMSEGQAQRYSFAAHAGDVIGNLQGQWEQRVRPRLTARLPNLHRRPVQ
>CP025570.1|AZZ40921.1|2916241_2918371_+|glycosyltransferase
MLLNIAEAARELGRDVTVVAPASPGDVIAQASRRGFATVSIHGRGTAQYLANLRRWDSTQRRGLLWCNGLRPALATSGHTRRVVHLHQIPAGNQRYLAAAARAGALETVVPSDSMTAAVPGSTVMWNWNAPVPERPGRAPSTPVVLGFIGRLSKRKGILVLLDALRELDRRQPGRFRLLVAGEPRFVPEKEAEAIRTALASLGEMVETRGWMDRDEFFSAVDCAVVPSVWAEPFGLVAAEAMAARCPLVVTSAGALPEITGPGYPYTADPEDPSSLADAIEAAVAADTDQVLTASRDRWERLFAPGPGRERLAAALDRVDPEPHTGPRVVIAHDYLTQRGGAERVAGCLAEAFPKAPILTSLHDPASTFPQFDNRAVATSPLNASHLLRRKFRFGLPLYAWFFEHAPIPRSADVVVASSTGFAHGVHTPPGTRKLVYCHSPARFLYLSDEYLGGHWWRSPAGWALKALRPGLIAWDHRAAASADRYLCNSAVVRDRIKEVYGIDATVIHPPHILDASGPQEPVDQLAEMSPDTGSSSFFLVVSRLMAYKNVDVLLKAFAQMPDRRLVVVGRGPMRSELHAIAPANVTFLEGIPDSQLRWLYGHATAVLAPSKEDYGLTPVEGFSFGTPALALRAGGYLDTVVDSVSGYFFDSATPSDVQQAIEQLQEHPLDRTTILKHAEQFSPEAFKNRIRTEVEALARTPYKSEEQM
>CP025570.1|AZZ40496.1|2918367_2919300_+|glucosyltransferase
MTSASIVIPSFRGAKRLPRLLAALAAQTSSDWEAIVVIDGDLDGSQQVVDRYSHLPVRSIVFPQNRGRVAALNAGFEAATGDVLIRCDDDLEPAPDYVAQHVASHSGDAQGTIGIYRNVLVPSRYTTVYGEQADTLFRQAAYSASPDQRWRFWAGNVSVTRDTWNRVGGYDPRYRTYGWEDVDYGFRLREAGIPVVIDTSLETDHHAAAVTTPSRVRRAYHSGEARRLFDQIHGPGASSAVRPVDATTWNRLVGATANQLTYRRASALSEVVDTAIRGLPGPVGRKLVALLVEAAGVAGYRNTEDVPNDI
>CP025570.1|AZZ40497.1|2919064_2921170_+|ABC-transporter-ATP-binding-protein
MGQVHPARYGPSTRRLGIDWSARPPTSSPIDEQVHFPRSSIRRFGACRALWAANWSRCSSRRPALPGTGTRRMCPMTSEVDGKKAKDPGFGANLRTLFSTFPRDVRFRLVLYVVSQVFISLMGIVGISVVLPIMQVMMGANMDTGYLGLMSSILGHPSRGRFVVLTSIIMVVAFFVKSLATIALTWWSLGFVSRLQVRTSTRLLRHYLDESYLDHRTRDLGDMMRRIDSAVMDAHQKVLGSILALISSLMSVVLLLGMLLVIMPGPTVAAVIYFSLIILVVQKILAKISRDVGRTNQRTGWLKTRTLMEALQGFREIYMHDAQDEFISRYRKHSDENIESGRKENTLASLPTQIFQTMTILGVALLLCWIVWTGSAHSAIPTLTLFMAVIIQLLPTMSALSAQIGAIRVGQAGLALTAETLRTESVRDAVSDAGELEASNHTGATGLGRADTGTIDIRNLKFRYPDGNHDVLSGIDISVSRGSSLALCGLSGSGKTTLVDIVLGLLPPTSGHVRVGGMDVAQAGSAWRHQVAYVPQDVYIVDDTISANIAFGEPPDEWDISRIRRCVERAKLDDVVREAPQGLDTRLGEHGSLISGGQRQRIGIARALYRNPAVLVLDEATSALDNQTERQITSTIESLNGDITTILVAHRLSSVRNVDSLVFLENGRISGRGTFDEVRDSCPGFARLVALGRLDDTKETV
>CP025570.1|AZZ40498.1|2921259_2922399_+|hypothetical-protein
MSGGSVAIENLADGFSRYGVDVEFLSQFPGSGREPHHTARVILKHPRWHKGPVLRGGHTLRAKARAMPRLLAKRSELTIARRRLRRLMNSYGPETAVVFSHVKTKTFLDSTGYLPRADGPLLIGQHHSQFESLVDEPSLREALPLHFGDIDAFTTLTDEDAHKFEHLIPAPCFGVANPLQAGWTPSFASRPNKAVALARFSHEKQLDLMVRAFARATAAPDLSEWTLDIYGSGKEEGRIRSAIEASGSQGRIRLMGPTTSPETVYRQAAITLSSSNLEGFGLTILEAAACGTPSLAFDCSPGVRSLIRPDTGLLVRPLTEEAYAQALRGALSDPDRLAQMGRAASERAQQFSPDRIVDRWGAILSEAERQHSRRFSSAG
>CP025570.1|AZZ40499.1|2922365_2924306_-|hypothetical-protein
MTVDTASETDVPEVSVIIACHNATKTLPLQLEALSRQEGAPAFEVILSDNRSEDALLSLVDAWRPRLKLRYVWSGQVPGAAYARNVGMSIARADKWLFCDADDAVARDWISRGAAVLDLAPVFSGGAVRATDAELSRPLEEVWAQLDAGFQAGSALVAEAPANWPIIMGGNFGIRRHAALAVGGFDAAMERGVEDNDLACRLEQAGVFVSAGGTRIRYRKRTGAVSILRESFTSGKWHMALVERHGLAERSPQLHGRRWMVAPLRVVGAALKNAAKGCNGDWPAVFSRAGAAAGLWSGWLTYRVGRGLPEPLIGAGLGSREPELSESAAVLVVSPHLDDALFSCSELIRRTRPDVWTVFAGEPEPSMTTTWDRTCGFPDSHALMAQRRREDCDAFEGVGAEVRHLDMLDGVYTTTSRRAVDLERLADDVREWLAAHRSQAPVLVLPACAGVTVPPGAMDRVSRLLAVLNRHEGGGTTPSGSGEAEHVAQGDADLPPKVSEPSMVNRAADDLRRMKHMLYQHRRARAQRSGLAVNGDHVAVRDTVLDVVSHADQTVRILLAEDLPYLWSQPGDEEVARIADQHALHAVPHEFHVDRDWKRSRLMHYTSQLDVMDPAHRRFDRPDSIPPVERCWELVAQPAEENRREC
>CP025570.1|AZZ40500.1|2924302_2925316_-|prephenate-dehydrogenase
MSRMVFTDLEAWQRWSDRRSALRRTLSRMRHPARAASEARILLTLPTLEPEILVVVDGGSASWRLALGRAVERMDPHRTAVLSRLPEVSDLIPEGTHVIWNQGDSLPDVRSVLSLGSFNDLAGQVRPWCRQHDVRFVVAQHGLITPWAPPSADGDHFLAWSEADAAYQSAGRSSVTTEVVGSQMLWEAAKMPTAQMRDGRPVMLGQLHGIELGRASEQCIYTSFCTRFAADYRPHPNEADVLSRAQHVIMRRAGVHFEMSGLPLAELGRPVVSIFSTGTLEAAQRGLPAWVYHPQPPDWIRDFWSRYGLSQFGSAPTAPPVLPDVEPATQVARIMEE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP025570_2	2.12\|323020\|37\|CP025570\|PILER-CR,CRISPRCasFinder,CRT	323020-323056	37	CP025570.1	193755-193791	1	0.973
CP025570_9	9.1\|2844927\|18\|CP025570\|CRISPRCasFinder	2844927-2844944	18	CP025570.1	1210443-1210460	2	0.889

1. spacer 2.12|323020|37|CP025570|PILER-CR,CRISPRCasFinder,CRT matches to position: 193755-193791, mismatch: 1, identity: 0.973

caggatggccggcgccggcacctgggcctcctcggcg	CRISPR spacer
caggatggccggcgccggcacctgggcatcctcggcg	Protospacer
*************************** *********

2. spacer 9.1|2844927|18|CP025570|CRISPRCasFinder matches to position: 1210443-1210460, mismatch: 2, identity: 0.889

acccacaccatcgccgga	CRISPR spacer
accctcaccgtcgccgga	Protospacer
**** ****.********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP025570_6	6.1\|2053097\|26\|CP025570\|CRISPRCasFinder	2053097-2053122	26	NC_011251	Borrelia duttonii Ly plasmid pl41, complete sequence	35517-35542	4	0.846
CP025570_6	6.1\|2053097\|26\|CP025570\|CRISPRCasFinder	2053097-2053122	26	NC_008442	Borrelia duttonii plasmid DNA, complete sequence, strain: Ly	40902-40927	4	0.846
CP025570_8	8.1\|2581298\|25\|CP025570\|CRISPRCasFinder	2581298-2581322	25	NZ_CP030830	Neorhizobium sp. NCHU2750 plasmid pNCHU2750c, complete sequence	168828-168852	4	0.84
CP025570_12	12.1\|2907119\|28\|CP025570\|CRISPRCasFinder	2907119-2907146	28	MT889373	Arthrobacter phage Brynnie, complete genome	8669-8696	4	0.857
CP025570_11	11.1\|2897997\|28\|CP025570\|CRISPRCasFinder	2897997-2898024	28	NZ_CP046101	Rhodococcus sp. AQ5-07 plasmid unnamed2, complete sequence	92097-92124	5	0.821
CP025570_12	12.1\|2907119\|28\|CP025570\|CRISPRCasFinder	2907119-2907146	28	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	190385-190412	5	0.821
CP025570_12	12.1\|2907119\|28\|CP025570\|CRISPRCasFinder	2907119-2907146	28	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	121235-121262	6	0.786
CP025570_12	12.1\|2907119\|28\|CP025570\|CRISPRCasFinder	2907119-2907146	28	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	737594-737621	6	0.786
CP025570_12	12.1\|2907119\|28\|CP025570\|CRISPRCasFinder	2907119-2907146	28	NZ_CP033582	Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence	386944-386971	6	0.786
CP025570_12	12.1\|2907119\|28\|CP025570\|CRISPRCasFinder	2907119-2907146	28	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	118811-118838	6	0.786
CP025570_12	12.1\|2907119\|28\|CP025570\|CRISPRCasFinder	2907119-2907146	28	MK433260	Streptomyces phage Namo, complete genome	15385-15412	6	0.786
CP025570_12	12.1\|2907119\|28\|CP025570\|CRISPRCasFinder	2907119-2907146	28	KX670789	Streptomyces phage OlympicHelado, complete genome	15385-15412	6	0.786
CP025570_12	12.1\|2907119\|28\|CP025570\|CRISPRCasFinder	2907119-2907146	28	KX670790	Streptomyces phage Rima, complete genome	15385-15412	6	0.786
CP025570_12	12.1\|2907119\|28\|CP025570\|CRISPRCasFinder	2907119-2907146	28	MN204494	Streptomyces phage Jaylociraptor, complete genome	15379-15406	6	0.786
CP025570_12	12.1\|2907119\|28\|CP025570\|CRISPRCasFinder	2907119-2907146	28	MK433259	Streptomyces phage IceWarrior, complete genome	15379-15406	6	0.786
CP025570_1	1.30\|318812\|35\|CP025570\|CRISPRCasFinder,CRT,PILER-CR	318812-318846	35	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	633970-634004	7	0.8
CP025570_7	7.1\|2415508\|32\|CP025570\|CRISPRCasFinder	2415508-2415539	32	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	195113-195144	7	0.781
CP025570_1	1.10\|317379\|36\|CP025570\|CRISPRCasFinder,CRT,PILER-CR	317379-317414	36	NC_007950	Polaromonas sp. JS666 plasmid 2, complete sequence	144215-144250	8	0.778
CP025570_1	1.30\|318812\|35\|CP025570\|CRISPRCasFinder,CRT,PILER-CR	318812-318846	35	NC_028673	Gordonia phage GMA7, complete genome	61519-61553	8	0.771
CP025570_1	1.43\|319741\|34\|CP025570\|CRISPRCasFinder,CRT,PILER-CR	319741-319774	34	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	519442-519475	8	0.765
CP025570_1	1.43\|319741\|34\|CP025570\|CRISPRCasFinder,CRT,PILER-CR	319741-319774	34	NZ_CP035710	Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt10, complete sequence	36437-36470	8	0.765
CP025570_2	2.12\|323020\|37\|CP025570\|PILER-CR,CRISPRCasFinder,CRT	323020-323056	37	NC_010333	Caulobacter sp. K31 plasmid pCAUL02, complete sequence	137444-137480	8	0.784
CP025570_1	1.38\|319381\|35\|CP025570\|CRISPRCasFinder,CRT,PILER-CR	319381-319415	35	AP021850	Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome	385682-385716	9	0.743
CP025570_1	1.43\|319741\|34\|CP025570\|CRISPRCasFinder,CRT,PILER-CR	319741-319774	34	NZ_CP029341	Streptomyces sp. SM17 plasmid pSM17C, complete sequence	7311-7344	9	0.735
CP025570_7	7.1\|2415508\|32\|CP025570\|CRISPRCasFinder	2415508-2415539	32	MH001458	Mycobacterium phage Smeagol, complete genome	31513-31544	9	0.719
CP025570_7	7.1\|2415508\|32\|CP025570\|CRISPRCasFinder	2415508-2415539	32	KF493880	Mycobacterium phage HanShotFirst, complete genome	29649-29680	9	0.719
CP025570_1	1.19\|318025\|35\|CP025570\|CRISPRCasFinder,CRT,PILER-CR	318025-318059	35	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	663185-663219	10	0.714
CP025570_1	1.19\|318025\|35\|CP025570\|CRISPRCasFinder,CRT,PILER-CR	318025-318059	35	NZ_CP034352	Streptomyces sp. W1SF4 plasmid p2, complete sequence	144997-145031	10	0.714
CP025570_1	1.19\|318025\|35\|CP025570\|CRISPRCasFinder,CRT,PILER-CR	318025-318059	35	NZ_CP034352	Streptomyces sp. W1SF4 plasmid p2, complete sequence	148159-148193	10	0.714
CP025570_7	7.1\|2415508\|32\|CP025570\|CRISPRCasFinder	2415508-2415539	32	NZ_CP022192	Yangia pacifica strain YSBP01 plasmid unnamed2, complete sequence	84009-84040	10	0.688
CP025570_7	7.1\|2415508\|32\|CP025570\|CRISPRCasFinder	2415508-2415539	32	NC_006569	Ruegeria pomeroyi DSS-3 megaplasmid, complete sequence	299541-299572	10	0.688
CP025570_1	1.29\|318740\|36\|CP025570\|CRISPRCasFinder,CRT,PILER-CR	318740-318775	36	NZ_CP012296	Pediococcus damnosus strain TMW 2.1536 plasmid pL21536-2, complete sequence	19066-19101	11	0.694

1. spacer 6.1|2053097|26|CP025570|CRISPRCasFinder matches to NC_011251 (Borrelia duttonii Ly plasmid pl41, complete sequence) position: , mismatch: 4, identity: 0.846

gaaaaaggaaaccgtctctcctgatt	CRISPR spacer
caaaaaggaaaccatctctcctgcat	Protospacer
 ************.*********  *

2. spacer 6.1|2053097|26|CP025570|CRISPRCasFinder matches to NC_008442 (Borrelia duttonii plasmid DNA, complete sequence, strain: Ly) position: , mismatch: 4, identity: 0.846

gaaaaaggaaaccgtctctcctgatt	CRISPR spacer
aaaaaaggaaaccatctcgcctgaat	Protospacer
.************.**** ***** *

3. spacer 8.1|2581298|25|CP025570|CRISPRCasFinder matches to NZ_CP030830 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750c, complete sequence) position: , mismatch: 4, identity: 0.84

ctcccatagtgctgcgtgggtgtct	CRISPR spacer
ctcccatagcgctgcgtgggagtaa	Protospacer
*********.********** **

4. spacer 12.1|2907119|28|CP025570|CRISPRCasFinder matches to MT889373 (Arthrobacter phage Brynnie, complete genome) position: , mismatch: 4, identity: 0.857

tccgacggcgtgggggacgactcccggg	CRISPR spacer
gctgacggcgtgggcggcgactcccggg	Protospacer
 *.*********** *.***********

5. spacer 11.1|2897997|28|CP025570|CRISPRCasFinder matches to NZ_CP046101 (Rhodococcus sp. AQ5-07 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.821

atcccctcccccaccgccccagaccaca	CRISPR spacer
cgcccctcccccaccgccgcagacaacc	Protospacer
  **************** ***** **

6. spacer 12.1|2907119|28|CP025570|CRISPRCasFinder matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 5, identity: 0.821

tccgacggcgtgggggacgactcccggg	CRISPR spacer
gccgacggggtgggggacgactccggcc	Protospacer
 ******* *************** *

7. spacer 12.1|2907119|28|CP025570|CRISPRCasFinder matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 6, identity: 0.786

tccgacggcgtgggggacgactcccggg	CRISPR spacer
gccgacggggtgggggacgattccggcc	Protospacer
 ******* ***********.*** *

8. spacer 12.1|2907119|28|CP025570|CRISPRCasFinder matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 6, identity: 0.786

tccgacggcgtgggggacgactcccggg	CRISPR spacer
gccgacggggtgggggacgattccggcc	Protospacer
 ******* ***********.*** *

9. spacer 12.1|2907119|28|CP025570|CRISPRCasFinder matches to NZ_CP033582 (Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence) position: , mismatch: 6, identity: 0.786

tccgacggcgtgggggacgactcccggg	CRISPR spacer
gccgacggcgtggggaacgacgccgcgc	Protospacer
 **************.***** **  *

10. spacer 12.1|2907119|28|CP025570|CRISPRCasFinder matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 6, identity: 0.786

tccgacggcgtgggggacgactcccggg	CRISPR spacer
gccgacggggtgggggacgattccggcc	Protospacer
 ******* ***********.*** *

11. spacer 12.1|2907119|28|CP025570|CRISPRCasFinder matches to MK433260 (Streptomyces phage Namo, complete genome) position: , mismatch: 6, identity: 0.786

tccgacggcgtgggggacgactcccggg	CRISPR spacer
aaccacggcgtggggaacgactcccagt	Protospacer
  * ***********.*********.*

12. spacer 12.1|2907119|28|CP025570|CRISPRCasFinder matches to KX670789 (Streptomyces phage OlympicHelado, complete genome) position: , mismatch: 6, identity: 0.786

tccgacggcgtgggggacgactcccggg	CRISPR spacer
aaccacggcgtggggaacgactcccagt	Protospacer
  * ***********.*********.*

13. spacer 12.1|2907119|28|CP025570|CRISPRCasFinder matches to KX670790 (Streptomyces phage Rima, complete genome) position: , mismatch: 6, identity: 0.786

tccgacggcgtgggggacgactcccggg	CRISPR spacer
aaccacggcgtggggaacgactcccagt	Protospacer
  * ***********.*********.*

14. spacer 12.1|2907119|28|CP025570|CRISPRCasFinder matches to MN204494 (Streptomyces phage Jaylociraptor, complete genome) position: , mismatch: 6, identity: 0.786

tccgacggcgtgggggacgactcccggg	CRISPR spacer
aaccacggcgtggggaacgactcccagt	Protospacer
  * ***********.*********.*

15. spacer 12.1|2907119|28|CP025570|CRISPRCasFinder matches to MK433259 (Streptomyces phage IceWarrior, complete genome) position: , mismatch: 6, identity: 0.786

tccgacggcgtgggggacgactcccggg	CRISPR spacer
aaccacggcgtggggaacgactcccagt	Protospacer
  * ***********.*********.*

16. spacer 1.30|318812|35|CP025570|CRISPRCasFinder,CRT,PILER-CR matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.8

cagtg-gatcgccgacgagctgacgaagttcaggaa	CRISPR spacer
-agcgtcactgccgacgagcggaagaagttcaggaa	Protospacer
 **.*  *..********** ** ************

17. spacer 7.1|2415508|32|CP025570|CRISPRCasFinder matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

-acatggcagcggtgcccgaccacacccggcca	CRISPR spacer
cactcgac-gcggtgcgcgaccgcacccggccg	Protospacer
 ** .*.* ******* *****.*********.

18. spacer 1.10|317379|36|CP025570|CRISPRCasFinder,CRT,PILER-CR matches to NC_007950 (Polaromonas sp. JS666 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.778

ggggtgctcgggatgctcggcgatagcggccagcgt	CRISPR spacer
ctgctgctcgggatgatcggcgatggcggccgaagt	Protospacer
  * *********** ********.******.. **

19. spacer 1.30|318812|35|CP025570|CRISPRCasFinder,CRT,PILER-CR matches to NC_028673 (Gordonia phage GMA7, complete genome) position: , mismatch: 8, identity: 0.771

cagtggatcgccgacgagctgacgaagttcaggaa	CRISPR spacer
gacgagatcgccgacgagctgaacaagttcaaaaa	Protospacer
 *  .*****************  *******..**

20. spacer 1.43|319741|34|CP025570|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 8, identity: 0.765

gtccccgtcgtgctgcgtccggccgccggggttc	CRISPR spacer
gcggtggacgcgctgcgtccggccgccggggtgc	Protospacer
*.  . * **.********************* *

21. spacer 1.43|319741|34|CP025570|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035710 (Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt10, complete sequence) position: , mismatch: 8, identity: 0.765

gtccccgtcgtgctgcgtccggccgccggggttc	CRISPR spacer
ctgcccgtctggctgcgtccggccgccccgctgc	Protospacer
 * ******  ****************  * * *

22. spacer 2.12|323020|37|CP025570|PILER-CR,CRISPRCasFinder,CRT matches to NC_010333 (Caulobacter sp. K31 plasmid pCAUL02, complete sequence) position: , mismatch: 8, identity: 0.784

caggatggccggcgccggcacctgggcctcctcggcg	CRISPR spacer
ctcgatggccggcgccgggacctgggccttgccatcg	Protospacer
*  *************** **********. .*. **

23. spacer 1.38|319381|35|CP025570|CRISPRCasFinder,CRT,PILER-CR matches to AP021850 (Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome) position: , mismatch: 9, identity: 0.743

agtgggcg-----ggcgccgaccacggcggtgttccccca	CRISPR spacer
-----gcgatggtggcggcgtccacggcggtgttccccgc	Protospacer
     ***     **** ** *****************

24. spacer 1.43|319741|34|CP025570|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029341 (Streptomyces sp. SM17 plasmid pSM17C, complete sequence) position: , mismatch: 9, identity: 0.735

gtccccgtcgtgctgcgtccggccgccggggttc	CRISPR spacer
gcgcgcagcgtgctgcgccgggccgccggggtca	Protospacer
*. * *. *********.* ************.

25. spacer 7.1|2415508|32|CP025570|CRISPRCasFinder matches to MH001458 (Mycobacterium phage Smeagol, complete genome) position: , mismatch: 9, identity: 0.719

acatggcagcggtgcccgaccacacccggcca	CRISPR spacer
gtttcagagcggtggccgaccactcccggccc	Protospacer
.. * . ******* ******** *******

26. spacer 7.1|2415508|32|CP025570|CRISPRCasFinder matches to KF493880 (Mycobacterium phage HanShotFirst, complete genome) position: , mismatch: 9, identity: 0.719

acatggcagcggtgcccgaccacacccggcca	CRISPR spacer
gcttcagcgcggtggccgaccactcccggccc	Protospacer
.* * .  ****** ******** *******

27. spacer 1.19|318025|35|CP025570|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.714

tcgaggacgtggaccccgtcgaggtccaggcctgg	CRISPR spacer
gaggggacgtggacgccgtcgcggtccagccagta	Protospacer
  *.********** ****** ******* *   .

28. spacer 1.19|318025|35|CP025570|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034352 (Streptomyces sp. W1SF4 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.714

tcgaggacgtggaccccgtcgaggtccaggcctgg	CRISPR spacer
cgcaggacgtggacgccgtcgaggcccacggcacc	Protospacer
.  *********** *********.*** * *

29. spacer 1.19|318025|35|CP025570|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034352 (Streptomyces sp. W1SF4 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.714

tcgaggacgtggaccccgtcgaggtccaggcctgg	CRISPR spacer
cgcaggacgtggacgccgtcgaggcccacggcacc	Protospacer
.  *********** *********.*** * *

30. spacer 7.1|2415508|32|CP025570|CRISPRCasFinder matches to NZ_CP022192 (Yangia pacifica strain YSBP01 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

acatggcagcggtgcccgaccacacccggcca	CRISPR spacer
cgccgaaggcggtgcccttccacacccggccc	Protospacer
   .*. .*********  ************

31. spacer 7.1|2415508|32|CP025570|CRISPRCasFinder matches to NC_006569 (Ruegeria pomeroyi DSS-3 megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.688

acatggcagcggtgcccgaccacacccggcca	CRISPR spacer
cgccgaatgcggtgcccttccacacccggccg	Protospacer
   .*.  *********  ************.

32. spacer 1.29|318740|36|CP025570|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012296 (Pediococcus damnosus strain TMW 2.1536 plasmid pL21536-2, complete sequence) position: , mismatch: 11, identity: 0.694

ggatctgcgtctggcgaaggacggcaatcagcagta	CRISPR spacer
caccgagtgtctggccaacgacggcaatcagcaggc	Protospacer
 . .  *.******* ** ***************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

239638 : 302360

Pandoravirus(15.38%)

integrase,tRNA,transposase

attL 289532:289549|attR 292551:292568

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZZ38572.1\|239638_240469_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AZZ38573.1\|240613_240862_+	hypothetical protein	NA	NA	NA	NA
AZZ38574.1\|241193_242147_+	prephenate dehydratase	NA	NA	NA	NA
AZZ38575.1\|242230_243502_+\|tRNA	serine--tRNA ligase	A0A2I2L4X3	Orpheovirus	1.3e-58	33.7
AZZ40612.1\|243515_244853_+	DUF4921 domain-containing protein	NA	NA	NA	NA
AZZ38576.1\|244836_246243_-	beta-glucosidase	A0A0B5JD41	Pandoravirus	1.2e-65	34.5
AZZ38577.1\|246277_247072_-	HAD family phosphatase	NA	NA	NA	NA
AZZ40613.1\|247128_247626_-	transcription factor WhiB	NA	NA	NA	NA
AZZ38578.1\|247994_249413_-	argininosuccinate synthase	A0A140XAJ5	Dickeya_phage	5.2e-45	68.3
AZZ40614.1\|249457_249958_-	hypothetical protein	NA	NA	NA	NA
AZZ38579.1\|250191_251193_+	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA
AZZ38580.1\|251330_252533_+	galactokinase	NA	NA	NA	NA
AZZ38581.1\|252545_253622_+	LacI family transcriptional regulator	C6ZCU4	Enterobacteria_phage	1.0e-37	32.8
AZZ40615.1\|253643_255404_-	LytR family transcriptional regulator	NA	NA	NA	NA
AZZ38582.1\|256136_256439_-	hypothetical protein	NA	NA	NA	NA
AZZ38583.1\|256683_257406_+	glycerophosphodiester phosphodiesterase	A0A0S2MYI4	Enterococcus_phage	4.9e-15	27.7
AZZ38584.1\|257443_259480_-	S9 family peptidase	NA	NA	NA	NA
AZZ38585.1\|259509_261399_-	1,4-alpha-glucan branching protein	NA	NA	NA	NA
AZZ38586.1\|261446_261968_+	hypothetical protein	NA	NA	NA	NA
AZZ38587.1\|262096_262951_-	acyl dehydratase	NA	NA	NA	NA
AZZ40616.1\|262934_263561_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
AZZ38588.1\|263741_264488_+\|tRNA	tRNA adenosine deaminase	NA	NA	NA	NA
AZZ38589.1\|264549_265017_+	nucleoside deaminase	S4VYZ2	Pandoravirus	2.7e-06	44.3
AZZ40617.1\|265201_266521_+	RfbX	NA	NA	NA	NA
AZZ38590.1\|266866_267061_+	hypothetical protein	NA	NA	NA	NA
AZZ38591.1\|268027_268966_-	hypothetical protein	NA	NA	NA	NA
AZZ38592.1\|269334_269586_+	hypothetical protein	NA	NA	NA	NA
AZZ38593.1\|269613_271134_-	2', 3'-cyclic nucleotide 2'-phosphodiesterase	NA	NA	NA	NA
AZZ40618.1\|271352_272261_-	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
AZZ38594.1\|272340_273036_-	ABC transporter permease	NA	NA	NA	NA
AZZ38595.1\|273032_273683_-	ABC transporter permease	NA	NA	NA	NA
AZZ38596.1\|273679_274795_-	proline/glycine betaine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.9e-24	34.4
AZZ38597.1\|274814_276323_+	potassium/proton antiporter	NA	NA	NA	NA
AZZ38598.1\|276332_276914_-	hypothetical protein	NA	NA	NA	NA
AZZ38599.1\|276926_277220_-	antitoxin VapB	NA	NA	NA	NA
AZZ38600.1\|277409_278570_+	aminotransferase	NA	NA	NA	NA
AZZ38601.1\|278781_279960_+	hypothetical protein	NA	NA	NA	NA
AZZ38602.1\|280057_281017_-	septal ring lytic transglycosylase RlpA family protein	Q5GQH9	Synechococcus_phage	1.8e-17	53.5
AZZ38603.1\|281262_282639_-	acetylornithine deacetylase	NA	NA	NA	NA
AZZ38604.1\|282954_283989_+	LacI family transcriptional regulator	NA	NA	NA	NA
AZZ40619.1\|284012_285497_+	sugar ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.0e-15	27.5
AZZ40620.1\|285586_286561_+	ABC transporter permease	NA	NA	NA	NA
AZZ38605.1\|286635_287589_+	D-ribose ABC transporter substrate-binding protein	NA	NA	NA	NA
AZZ38606.1\|287585_288509_+	ribokinase	NA	NA	NA	NA
AZZ38607.1\|288505_288889_+	D-ribose pyranase	NA	NA	NA	NA
AZZ38608.1\|288988_289585_+	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
289532:289549	attL	NA	NA	NA	NA
AZZ38609.1\|289610_290603_-\|integrase	integrase	A0A142F1N9	Bacillus_phage	2.0e-11	24.0
AZZ38610.1\|290595_291567_-\|integrase	integrase	NA	NA	NA	NA
AZZ38611.1\|291527_292469_-\|integrase	integrase	A0A0K2CP59	Brevibacillus_phage	1.8e-17	24.2
AZZ38612.1\|292609_293935_-\|transposase	ISL3 family transposase	A0A2H4PDF8	Mycobacterium_phage	1.3e-186	75.5
292551:292568	attR	NA	NA	NA	NA
AZZ38613.1\|294309_298590_+	hypothetical protein	NA	NA	NA	NA
AZZ38614.1\|298608_299844_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AZZ38615.1\|300971_302360_-\|transposase	IS1380 family transposase	A0A222ZN33	Mycobacterium_phage	1.0e-117	51.8

DBSCAN-SWA_2

908609 : 967067

Mycobacterium_phage(23.08%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZZ40692.1\|908609_909857_+\|transposase	ISL3 family transposase	A0A2H4PDF8	Mycobacterium_phage	7.3e-67	40.3
AZZ39073.1\|909923_910460_-	NUDIX hydrolase	NA	NA	NA	NA
AZZ39074.1\|910456_911128_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AZZ39075.1\|911237_912626_-\|transposase	IS1380 family transposase	A0A222ZN33	Mycobacterium_phage	3.5e-118	51.8
AZZ39076.1\|913098_914322_+	ATPase	NA	NA	NA	NA
AZZ39077.1\|914579_914981_+	hypothetical protein	NA	NA	NA	NA
AZZ39078.1\|915407_915605_+	hypothetical protein	NA	NA	NA	NA
AZZ39079.1\|917634_918258_-	oligoribonuclease	M4M9I5	Vibrio_phage	1.6e-22	37.6
AZZ40693.1\|918597_919857_+\|protease	protease PrsW	NA	NA	NA	NA
AZZ39080.1\|919979_920588_+	single-stranded DNA-binding protein	A0A2D2W3D5	Mycobacterium_phage	6.6e-05	26.1
AZZ39081.1\|920802_922491_+	energy-dependent translational throttle protein EttA	A0A2K9L3Z8	Tupanvirus	2.9e-42	28.0
AZZ39082.1\|922702_922966_+	hypothetical protein	NA	NA	NA	NA
AZZ39083.1\|923049_924594_-	Na+/H+ antiporter NhaC	NA	NA	NA	NA
AZZ39084.1\|924637_925885_-	arginine deiminase	NA	NA	NA	NA
AZZ39085.1\|925920_927393_-	amino acid permease	NA	NA	NA	NA
AZZ39086.1\|927808_928444_+	DNA-binding response regulator	NA	NA	NA	NA
AZZ39087.1\|928444_929605_+	hypothetical protein	NA	NA	NA	NA
AZZ39088.1\|929601_930600_+	hypothetical protein	NA	NA	NA	NA
AZZ39089.1\|932133_933633_+	HNH endonuclease	NA	NA	NA	NA
AZZ40694.1\|934067_936929_-	FAD-binding oxidoreductase	NA	NA	NA	NA
AZZ39090.1\|936949_937447_-	MarR family transcriptional regulator	NA	NA	NA	NA
AZZ39091.1\|939698_941618_+	long-chain fatty acid--CoA ligase	A0A1V0SBX8	Catovirus	1.2e-39	22.6
AZZ40695.1\|941662_942475_+	thioesterase	NA	NA	NA	NA
AZZ39092.1\|942553_943051_-	XRE family transcriptional regulator	NA	NA	NA	NA
AZZ39093.1\|943120_944572_-	NADP-dependent phosphogluconate dehydrogenase	M4QGJ9	Cyanophage	1.3e-30	32.6
AZZ39094.1\|944739_945045_+	hypothetical protein	NA	NA	NA	NA
AZZ39095.1\|945118_947713_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	4.2e-48	30.2
AZZ39096.1\|947977_948514_+	disulfide bond formation protein DsbA	NA	NA	NA	NA
AZZ39097.1\|948548_950777_+	NAD-dependent DNA ligase LigA	A0A0A8J9A9	Ralstonia_phage	1.9e-97	34.9
AZZ39098.1\|950907_951510_-	N-acetyltransferase	NA	NA	NA	NA
AZZ39099.1\|951570_952890_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AZZ39100.1\|952949_953423_+	ribose-5-phosphate isomerase	NA	NA	NA	NA
AZZ40696.1\|953783_954599_+	Fpg/Nei family DNA glycosylase	NA	NA	NA	NA
AZZ39101.1\|954628_956158_+	hypothetical protein	NA	NA	NA	NA
AZZ40697.1\|956352_959604_+\|tRNA	bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX	A0A2K9KZX5	Tupanvirus	1.0e-72	37.4
AZZ39102.1\|959593_960430_+	alpha/beta hydrolase	NA	NA	NA	NA
AZZ39103.1\|961023_962586_+	trigger factor	NA	NA	NA	NA
AZZ39104.1\|962735_964109_+	AI-2E family transporter	NA	NA	NA	NA
AZZ40698.1\|964242_964836_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	6.6e-42	45.9
AZZ39105.1\|964844_965570_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A248SJ97	Salicola_phage	1.3e-31	42.1
AZZ39106.1\|965777_967067_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.4e-137	58.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP025570

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection