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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP035031 Lactobacillus plantarum strain YW11 chromosome, complete genome 0 crisprs csa3,cas3,DEDDh,DinG,WYL 0 0 7 0
CP035027 Lactobacillus plantarum strain YW11 plasmid plsm_YW11_pB, complete sequence 0 crisprs NA 0 0 0 0
CP035028 Lactobacillus plantarum strain YW11 plasmid plsm_YW11_pC, complete sequence 0 crisprs NA 0 0 0 0
CP035029 Lactobacillus plantarum strain YW11 plasmid plsm_YW11_pD, complete sequence 0 crisprs NA 0 0 0 0
CP035032 Lactobacillus plantarum strain YW11 plasmid plsm_YW11_pA, complete sequence 0 crisprs NA 0 0 1 0
CP035030 Lactobacillus plantarum strain YW11 plasmid plsm_YW11_pE, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. CP035031
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 22805 : 94516 60 unidentified_phage(37.5%) transposase,protease NA
DBSCAN-SWA_2 757958 : 766472 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_3 920723 : 1010894 104 Lactobacillus_phage(38.46%) capsid,plate,terminase,integrase,tail,head,transposase,portal,holin attL 957772:957793|attR 1013069:1013089
DBSCAN-SWA_4 1845184 : 1855022 9 Lactobacillus_phage(87.5%) NA NA
DBSCAN-SWA_5 2187686 : 2242725 42 Moumouvirus(18.18%) bacteriocin,transposase,tRNA,integrase attL 2216331:2216352|attR 2219102:2219123
DBSCAN-SWA_6 2443443 : 2452068 11 Streptococcus_phage(66.67%) NA NA
DBSCAN-SWA_7 2585380 : 2642061 53 uncultured_Mediterranean_phage(18.18%) bacteriocin,transposase,tRNA,protease NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP035032
Click the left colored region to show detailed information

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 546 : 61758 60 Streptococcus_phage(20.0%) holin,transposase,protease NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage