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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP035112 Coxiella burnetii strain nine mile phase II chromosome, complete genome 1 crisprs NA 0 1 0 0
CP035111 Coxiella burnetii strain nine mile phase II plasmid unnamed, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. CP035112
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP035112_1 960950-961031 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP035112_1 1.1|960975|32|CP035112|CRISPRCasFinder 960975-961006 32 NZ_CP036488 Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence 30343-30374 8 0.75
CP035112_1 1.1|960975|32|CP035112|CRISPRCasFinder 960975-961006 32 NZ_CP032297 Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence 532636-532667 8 0.75
CP035112_1 1.1|960975|32|CP035112|CRISPRCasFinder 960975-961006 32 NC_017060 Rahnella aquatilis HX2 plasmid PRA1, complete sequence 112646-112677 8 0.75
CP035112_1 1.1|960975|32|CP035112|CRISPRCasFinder 960975-961006 32 NC_015062 Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence 115816-115847 8 0.75
CP035112_1 1.1|960975|32|CP035112|CRISPRCasFinder 960975-961006 32 NZ_CP034838 Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence 116094-116125 8 0.75
CP035112_1 1.1|960975|32|CP035112|CRISPRCasFinder 960975-961006 32 NZ_CP034839 Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence 116094-116125 8 0.75
CP035112_1 1.1|960975|32|CP035112|CRISPRCasFinder 960975-961006 32 NZ_CP034837 Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence 94007-94038 8 0.75
CP035112_1 1.1|960975|32|CP035112|CRISPRCasFinder 960975-961006 32 NC_012811 Methylorubrum extorquens AM1 megaplasmid, complete sequence 1120014-1120045 9 0.719
CP035112_1 1.1|960975|32|CP035112|CRISPRCasFinder 960975-961006 32 NZ_CP040452 Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence 1684755-1684786 10 0.688

1. spacer 1.1|960975|32|CP035112|CRISPRCasFinder matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 8, identity: 0.75 

cttcgtccttcggcgaggcctttttcaaagcc	CRISPR spacer
cactgtgcttcggtgaggcctttttcaggggc	Protospacer
* ..** ******.*************..* *

2. spacer 1.1|960975|32|CP035112|CRISPRCasFinder matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 8, identity: 0.75 

cttcgtccttcggcgaggcctttttcaaagcc	CRISPR spacer
cactgtgcttcggtgaggcctttttcaggggc	Protospacer
* ..** ******.*************..* *

3. spacer 1.1|960975|32|CP035112|CRISPRCasFinder matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 8, identity: 0.75 

cttcgtccttcggcgaggcctttttcaaagcc	CRISPR spacer
cactgtgcttcggtgaggcctttttcaggggc	Protospacer
* ..** ******.*************..* *

4. spacer 1.1|960975|32|CP035112|CRISPRCasFinder matches to NC_015062 (Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence) position: , mismatch: 8, identity: 0.75 

cttcgtccttcggcgaggcctttttcaaagcc	CRISPR spacer
cactgtgcttcggtgaggcctttttcaggggc	Protospacer
* ..** ******.*************..* *

5. spacer 1.1|960975|32|CP035112|CRISPRCasFinder matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 8, identity: 0.75 

cttcgtccttcggcgaggcctttttcaaagcc	CRISPR spacer
cactgtgcttcggtgaggcctttttcaggggc	Protospacer
* ..** ******.*************..* *

6. spacer 1.1|960975|32|CP035112|CRISPRCasFinder matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 8, identity: 0.75 

cttcgtccttcggcgaggcctttttcaaagcc	CRISPR spacer
cactgtgcttcggtgaggcctttttcaggggc	Protospacer
* ..** ******.*************..* *

7. spacer 1.1|960975|32|CP035112|CRISPRCasFinder matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 8, identity: 0.75 

cttcgtccttcggcgaggcctttttcaaagcc	CRISPR spacer
cactgtgcttcggtgaggcctttttcaggggc	Protospacer
* ..** ******.*************..* *

8. spacer 1.1|960975|32|CP035112|CRISPRCasFinder matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719 

cttcgtccttcggcgaggcctttttcaaagcc	CRISPR spacer
atcccggctacggcgaggcctttttccaaggg	Protospacer
 *.*   ** **************** ***

9. spacer 1.1|960975|32|CP035112|CRISPRCasFinder matches to NZ_CP040452 (Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688 

cttcgtccttcggcgaggcctttttcaaagcc	CRISPR spacer
tctcgtccatcggcgatgcctttttgttgagc	Protospacer
..****** ******* ********   .. *

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage