CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
CP035114	Lactobacillus plantarum strain SRCM103295 plasmid unnamed1	0 crisprs	NA	0	0	1
CP035113	Lactobacillus plantarum strain SRCM103295 chromosome, complete genome	2 crisprs	csa3,DinG,cas3,DEDDh	2	10	5
CP035115	Lactobacillus plantarum strain SRCM103295 plasmid unnamed2	0 crisprs	NA	0	0	1
CP035118	Lactobacillus plantarum strain SRCM103295 plasmid unnamed5	0 crisprs	NA	0	0	0
CP035117	Lactobacillus plantarum strain SRCM103295 plasmid unnamed4	0 crisprs	NA	0	0	0
CP035116	Lactobacillus plantarum strain SRCM103295 plasmid unnamed3	0 crisprs	NA	0	0	2

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

11575 : 65008

Lactobacillus_phage(40.0%)

protease,transposase,holin

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAR39254.1\|11575_12211_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
QAR39255.1\|12250_12526_+	hypothetical protein	NA	NA	NA	NA
QAR39256.1\|12925_13030_+\|holin	putative holin-like toxin	NA	NA	NA	NA
QAR39257.1\|13597_15760_+	type IA DNA topoisomerase	A0A1X9I6W8	Streptococcus_phage	5.5e-102	45.9
QAR39258.1\|15998_16964_+	DUF3991 domain-containing protein	NA	NA	NA	NA
QAR39259.1\|16960_17155_+	hypothetical protein	NA	NA	NA	NA
QAR39260.1\|17157_17778_+	hypothetical protein	NA	NA	NA	NA
QAR39261.1\|17774_19559_+\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	1.1e-79	33.5
QAR39262.1\|19624_19939_+	hypothetical protein	NA	NA	NA	NA
QAR39263.1\|20032_22147_+	hypothetical protein	NA	NA	NA	NA
QAR39264.1\|22156_22936_+	class A sortase	NA	NA	NA	NA
QAR39265.1\|22964_25904_+	isopeptide-forming domain-containing fimbrial protein	NA	NA	NA	NA
QAR39266.1\|25980_26277_+	hypothetical protein	NA	NA	NA	NA
QAR39267.1\|26999_28118_+	UDP-galactopyranose mutase	E4ZFQ1	Streptococcus_phage	6.6e-168	76.9
QAR39268.1\|28161_28800_+	sugar transferase	NA	NA	NA	NA
QAR39269.1\|29261_30032_+	polysaccharide biosynthesis protein	NA	NA	NA	NA
QAR39270.1\|30043_30772_+	tyrosine-protein kinase family protein	NA	NA	NA	NA
QAR39271.1\|30758_31532_+	tyrosine protein phosphatase	NA	NA	NA	NA
QAR39313.1\|31970_32741_+	DUF4422 domain-containing protein	NA	NA	NA	NA
QAR39272.1\|33891_34728_+	DUF4422 domain-containing protein	NA	NA	NA	NA
QAR39273.1\|34735_35947_+	hypothetical protein	NA	NA	NA	NA
QAR39274.1\|35979_37041_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
QAR39275.1\|37219_37450_-	hypothetical protein	NA	NA	NA	NA
QAR39276.1\|38305_38557_+\|transposase	IS3 family transposase	Q6J1X3	Lactobacillus_phage	9.2e-38	96.4
QAR39277.1\|38610_39453_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	1.8e-154	98.6
QAR39278.1\|39639_41097_+	flippase	NA	NA	NA	NA
QAR39279.1\|41583_42576_+	hypothetical protein	NA	NA	NA	NA
QAR39280.1\|44616_44772_+	hypothetical protein	NA	NA	NA	NA
QAR39281.1\|46656_47295_+	sugar transferase	NA	NA	NA	NA
QAR39282.1\|47756_48527_+	polysaccharide biosynthesis protein	NA	NA	NA	NA
QAR39283.1\|48538_49267_+	tyrosine-protein kinase family protein	NA	NA	NA	NA
QAR39284.1\|49253_50027_+	tyrosine protein phosphatase	NA	NA	NA	NA
QAR39314.1\|50465_51236_+	DUF4422 domain-containing protein	NA	NA	NA	NA
QAR39285.1\|51235_52360_+	glycosyltransferase family 1 protein	NA	NA	NA	NA
QAR39286.1\|52387_53224_+	DUF4422 domain-containing protein	NA	NA	NA	NA
QAR39287.1\|53231_54443_+	hypothetical protein	NA	NA	NA	NA
QAR39288.1\|54475_55537_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
QAR39289.1\|55715_55946_-	hypothetical protein	NA	NA	NA	NA
QAR39290.1\|56801_57053_+\|transposase	IS3 family transposase	Q6J1X3	Lactobacillus_phage	9.2e-38	96.4
QAR39291.1\|57106_57949_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	1.8e-154	98.6
QAR39292.1\|58135_59593_+	flippase	NA	NA	NA	NA
QAR39293.1\|60079_61072_+	hypothetical protein	NA	NA	NA	NA
QAR39294.1\|61764_62940_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	6.3e-28	29.6
QAR39295.1\|63116_63686_+	recombinase family protein	A0A1J1J8Z4	Escherichia_phage	7.0e-33	45.1
QAR39296.1\|63938_65008_-\|transposase	IS3-like element IS1163 family transposase	A0A1P8CWQ3	Bacillus_phage	1.4e-34	32.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP035113

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CRISPR-Cas detection and classification

Crispr_ID: CP035113_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP035113_1

347778-348275

Orphan

Consensus_repeat	Method
AAGTCNNANAAGAANAAN	CRT

13 spacers

The CRISPR arrays of CP035113_1

>merge|CP035113|1|347778-348275|CRT
AAGGCGCATAAGAAGAAGGCCGCTAAGAAACATAAGAAGTCGCACAAGAAGTCACACAAGAAGAAAGCGGCCAAGAAACATAAGAAGTCGCACAAGAAGAAAGCGGCCAAGAAACATAAGAAGCCGCACAAGAAGAAGTCTTCTAAGAAGCATGGCAAGTCGCACAAGAAAAAATCTTCGAAGAAGCACGGCAAGTCCAATAAGAAGAAGTCTTCGAAGAAGCACGGCAAGTCCAATAAGAAAAAGTCTTCCAAGAAACACGGCAAGTCGCACAAGAAAAAGTCTTCTAAGAAGCACGGCAAGTCCAATAAGAAAAAGTCTTCCAAGAAACATGGCAAGTCCAGTAAGAAGAAGTCTTCCAAGAAACATGGCAAGTCGCACAAGAAGAAATCTTCCAAGAAGCACGGCAAGTCCAATAAGAAGAAATCTTCCAAGAAGCATGGTAAATCCAGTAAGAAGAAATCATCTAAGAAGCACGGCAAGTCTAACAAGAAAAAA

>CP035113|1|1|347778-348275|CRT
AAGGCGCATAAGAAGAAG	GCCGCTAAGAAACATAAG
AAGTCGCACAAGAAGTCA	CACAAGAAGAAAGCGGCCAAGAAACATAAG
AAGTCGCACAAGAAGAAA	GCGGCCAAGAAACATAAG
AAGCCGCACAAGAAGAAG	TCTTCTAAGAAGCATGGC
AAGTCGCACAAGAAAAAA	TCTTCGAAGAAGCACGGC
AAGTCCAATAAGAAGAAG	TCTTCGAAGAAGCACGGC
AAGTCCAATAAGAAAAAG	TCTTCCAAGAAACACGGC
AAGTCGCACAAGAAAAAG	TCTTCTAAGAAGCACGGC
AAGTCCAATAAGAAAAAG	TCTTCCAAGAAACATGGC
AAGTCCAGTAAGAAGAAG	TCTTCCAAGAAACATGGC
AAGTCGCACAAGAAGAAA	TCTTCCAAGAAGCACGGC
AAGTCCAATAAGAAGAAA	TCTTCCAAGAAGCATGGT
AAATCCAGTAAGAAGAAA	TCATCTAAGAAGCACGGC
AAGTCTAACAAGAAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
CP035113.1\|QAR36721.1\|334755_336282_+\|ABC-transporter-permease/substrate-binding-protein	unknown	unknown	gnl\|CDD\|270328
CP035113.1\|QAR36720.1\|334071_334518_-\|ribonuclease-H	unknown	unknown	gnl\|CDD\|260010
CP035113.1\|QAR36727.1\|343813_347497_+\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|377660
CP035113.1\|QAR36723.1\|337331_338663_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224169
CP035113.1\|QAR36725.1\|340660_342490_+\|type-1-glycerol-3-phosphate-oxidase	unknown	unknown	gnl\|CDD\|380303
CP035113.1\|QAR36719.1\|332019_333900_+\|hypothetical-protein	unknown	unknown	unknown
CP035113.1\|QAR36722.1\|336282_337254_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224050
CP035113.1\|QAR39169.1\|349354_349870_+\|hypothetical-protein	unknown	unknown	unknown
CP035113.1\|QAR36732.1\|353303_353567_+\|hypothetical-protein	unknown	unknown	unknown
CP035113.1\|QAR36718.1\|330680_331580_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|180448
CP035113.1\|QAR36726.1\|342504_343227_+\|aquaporin-family-protein	unknown	unknown	gnl\|CDD\|223653
CP035113.1\|QAR36729.1\|350933_351200_+\|hypothetical-protein	unknown	unknown	unknown
CP035113.1\|QAR36728.1\|349987_350266_+\|hypothetical-protein	unknown	unknown	unknown
CP035113.1\|QAR36733.1\|353668_353947_+\|hypothetical-protein	unknown	unknown	unknown
CP035113.1\|QAR39168.1\|349093_349324_+\|hypothetical-protein	unknown	unknown	unknown
CP035113.1\|QAR39170.1\|354035_354134_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379612
CP035113.1\|QAR36724.1\|339128_340646_+\|glycerol-kinase	unknown	unknown	gnl\|CDD\|234594
CP035113.1\|QAR36734.1\|354140_354320_+\|hypothetical-protein	unknown	unknown	unknown
CP035113.1\|QAR36730.1\|351228_351621_+\|hypothetical-protein	unknown	unknown	unknown
CP035113.1\|QAR36731.1\|351836_352157_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP035113.1\|QAR36721.1\|334755_336282_+\|ABC-transporter-permease/substrate-binding-protein	gnl\|CDD\|270328	cd13610, PBP2_ChoS, Substrate-binding domain ChoS of an osmoregulated ABC-type transporter and related proteins; type 2 periplasmic-binding protein fold. Osmoprotectant binding lipoprotein ChoS of Lactococcus lactis is predicted to be involved in uptake of compatible solutes such as choline and glycine betaine, but the relative substrate preference is not known. To counteract the efflux of water, microorganisms accumulate the compatible solutes for a sustained adjustment to high osmolarity surroundings. ChoS belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.35324e-155
CP035113.1\|QAR36718.1\|330680_331580_+\|oxidoreductase	gnl\|CDD\|180448	PRK06182, PRK06182, short chain dehydrogenase; Validated.	3.10155e-161
CP035113.1\|QAR36726.1\|342504_343227_+\|aquaporin-family-protein	gnl\|CDD\|223653	COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism].	2.57693e-81
CP035113.1\|QAR36720.1\|334071_334518_-\|ribonuclease-H	gnl\|CDD\|260010	cd09278, RNase_HI_prokaryote_like, RNase HI family found mainly in prokaryotes. Ribonuclease H (RNase H) is classified into two evolutionarily unrelated families, type 1 (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type 2 (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner. RNase H is involved in DNA replication, repair and transcription. RNase H is widely present in various organisms, including bacteria, archaea and eukaryotes and most prokaryotic and eukaryotic genomes contain multiple RNase H genes. Despite the lack of amino acid sequence homology, type 1 and type 2 RNase H share a main-chain fold and steric configurations of the four acidic active-site (DEDD), residues and have the same catalytic mechanism and functions in cells. One of the important functions of RNase H is to remove Okazaki fragments during DNA replication. Prokaryotic RNase H varies greatly in domain structures and substrate specificities. Prokaryotes and some single-cell eukaryotes do not require RNase H for viability.	4.47824e-05
CP035113.1\|QAR36727.1\|343813_347497_+\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|377660	pfam06458, MucBP, MucBP domain. The MucBP (MUCin-Binding Protein) domain is found in a wide variety of bacterial proteins, in several repeats. The domain is found in bacterial peptidoglycan bound proteins and is often found in conjunction with pfam00746 and pfam00560.	5.83013e-10
CP035113.1\|QAR36723.1\|337331_338663_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224169	COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion].	7.34306e-124
CP035113.1\|QAR36725.1\|340660_342490_+\|type-1-glycerol-3-phosphate-oxidase	gnl\|CDD\|380303	NF033461, glycerol3P_ox_1, type 1 glycerol-3-phosphate oxidase. Glycerol-3-phosphate oxidase, also called alpha-glycerophosphate oxidase (GlpO), is an FAD-dependent enzyme related to the glycerol-3-phosphate dehydrogenase GlpD. Notably, GlpO releases hydrogen peroxide, which can contribute to virulence.	0
CP035113.1\|QAR39170.1\|354035_354134_+\|hypothetical-protein	gnl\|CDD\|379612	pfam14449, PT-TG, Pre-toxin TG. PT-TG is a conserved region found in many bacterial toxin proteins. It could function as a linker that links N-terminal secretion-related domain and C-terminal toxin domain. It contains a TG motif.	0.00247181
CP035113.1\|QAR36724.1\|339128_340646_+\|glycerol-kinase	gnl\|CDD\|234594	PRK00047, glpK, glycerol kinase GlpK.	0
CP035113.1\|QAR36722.1\|336282_337254_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224050	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism].	1.08528e-132

>CP035113.1|QAR36727.1|343813_347497_+|LPXTG-cell-wall-anchor-domain-containing-protein
MYTENTGKHHRNGLPVWLLPLLVVISFWGVSQNIMVVDASSSVTVLPGNGGTLPLVNQLVIKQNDTALQGITNNAGDRSSLTPKNGAQRVLIHKVKDSDTITSTYGTVGTFHGQEVTAKVTISHIKVHDDSHKAPSGMKQTDGAFQIGPGFSSDTTMSNVAQFNVSYEFYYADTHAAVNIQNAFITLSSLDGPVAGTSTGFEYTAYLGAGKIYTVENSIVKQIANSLGGGQLVMAGQTARDASWPYTSSTAATFGVSGTELEFIYGTTRVNSGNSWLQPVYNVSTITLGTPAIATPTLSATQSATDKQNRTLTYDLQQKVNVLDQDLMTKYKDWSENITIPANAKYAKGEVVNDAGQALPSTAYQVSYDEKTHQVKWHLTDSGLKSLPFKGETYHFKAQVQFSDDVDDQTKVTATGQTAIDKQTKTSNTVTNTIDNQATITVHHYMTDSTDKVAPDETVKVGYGKAYDVTKQVKTITGYKRNATLDEHTRGTASKTTKEAVMYYDPLPYNIHVNYLLTDGQKLDELDVTGLYGDTYTTEATDFEDLYTVDTDRLPTNAQGTVTEKPTTVNYYYQPTTGQWVDVGNQSSVLVRQDTKHNVRSVSQIYANDSGFTVKYNQDAAQVAIAASDTNGTQDNSLVFDYNSKYTFELSKNETVTFKVDDQGQVTATRVLGAEQTVTTFDKSGQLKTVTTVTNANGTKSQQTNTVDGLKSMVTGEQYDLGLLNGLKVTAQKEINPSQAATTESKTTTDTSQSGSNQSTSTTATDQTGTNESTAGSSTNATNASSSVDASSANSQGDTEATSQSGTSASADSKTDSSVASSTSQTTDGETTNTGDTTTGTTTGSGLGFKSPFTEDQNTSSALGSAQTSSSLNSDTSAAVQALIAEPNSTPVVLGEDASFEEGVPVNDPVFSNDEGVSPNNNPSSAATPLAQATNTRARLTQNGKLLYEGTLKADQGEQNLYVSPNTTVEVDGGADGDGFYLDTYDGDKGMAYTLGSGYAWAAENNDVTAAPASSATTSSESAASESNTNSSDSSRTASSAVDHSTSSASTSDASQSSHSTSSGESSHPESSSGSSTTSDSADADKQAAARSSQTQSNSVNGSSQAVSSSTVTSQSSVPTKANTKQASSTPTTKANRATVAAATSSTAPRKSRATTASASVPSVTSASAVAASRDKQQSAFKKQHPILNQILPKTNSAVATWLVWLGVGLLLLAVGITMVIKKRGRD
>CP035113.1|QAR36726.1|342504_343227_+|aquaporin-family-protein
MMKDPLALQLLGEFLGTFILILLGDGVVAGVTLNKSKAQNAGWVAITLGWGFAVTMGVYASSFMSPAHLNPAVSLGMAVAGKFPWAYVIPYSAVQIAGGVIGGLVVWLHYYPHWQATKDAGAILGIFATGPGIRRYFWNFISEVIGTFVLVFGLLAFTKGQFTAGLNPIVVGILIIAIGLSLGGTTGYAINPARDLGPRIAHAVLPIANKGTSDWAYSWVPIAGPLVGGALGALLFNVLP
>CP035113.1|QAR36725.1|340660_342490_+|type-1-glycerol-3-phosphate-oxidase
MAFSATTRQQNIERLQNETLDLLVIGGGITGAGVAIQSTAMNMKTGLIDMQDFAEGTSSRSTKLVHGGIRYLKTFDVGVVADTVKERAVVQGIAPHIPKPDSMLLPIYDETGATFDLFSVKVAMDLYDKLAEVKDPKFTNYTLSREEVLQREPQLNPKHLVGGGVYLDFRNNDARLVIENIKKAHENGGIMASHVKATGLLHDDDGRINGITAEDLLTGASFEIHARIVINTTGPWSDTIRKMDHTEKYQSQMRPTKGVHLVVDAEKLPVPQPTYFDSGDQDGRMIFVVPRENKTYFGTTDTDYHGDLKHPTVTQEDVDYLLEIVNRRFPTAKITLDDIEASWAGLRPLIAANGSSDYNGGNSGKISDKSFKEVIKVVDQFESQEASREDVESVLNDLETSLAEDKLSPSAVSRGSSLTSSPDGLLTLAGGKITDYRKMAAGAMALIAKILADKYDAHFNEINSKNLPVSGGDIDPHNVDATIAFYAKQGTDNGLTNDEALRIANMYGSNAARVFSLIGKVEPTHGLSLAETISLRYALDEEMTLTPVDYLLRRTNHLLFMRDTLDGLKDGVIATMADYLGWDAATVKAQTELLNQTIAESDLTALKQG
>CP035113.1|QAR36724.1|339128_340646_+|glycerol-kinase
MTDKYIMAIDEGTTSTRAIIFDHAGHKVADSQREFPQYFPQPGWVEHNANEIWNAVLSTIANAFIESGIKPAQISGIGITNQRETTIVWDKQTGLPIYNAIVWQSRQTAPIAEKLVKDGYGDLIHQHTGLVTDAYFSATKIRWILDHVKGAQERAEKGELLFGTIDTWLLWKLTGGATHVTDYSNASRTMLFNIHDLKWDDQILQLLNIPAAMLPEVRTNSEVYGKTKDYHFFGSEVPISGMAGDQQAALFGQLAFEPGTVKNTYGTGAFIVMNTGEKPQLSDNNLLTTIGYGINGKVYYALEGSIFVAGSAIQWLRDGIRLVESAPDSERAARESHNENEVYVVPAFTGLGAPYWDSEARGSVFGLTRGTTREDFIKATLQALAYQTRDVVETMKKDSGIEIPVLKVDGGAARNDWLMQFQADILDTQIMRAANLETTALGAAFLAGLSVGYWQDLEELKASYKPGTSFDPEMGPAERTNLYEGWQAAVKATQVFKHTPYHAGK
>CP035113.1|QAR36723.1|337331_338663_+|NAD(P)/FAD-dependent-oxidoreductase
MAEQYDVVVIGGGPAGNAMASGLKAQGKTVLIVEADLWGGTCPNRGCDPKKILLSAVEARQAAQHLQGQGLIGASKIDWPALMAHKRGYTDGINDGTLNGLKGQDIATLHGQAHFQSDNQLAVGDRVVSATDYVIATGQRPAILPITGHEYFKTSTDFLDLDQMPKRVTFVGGGYVGFELATIANAAGADVHVIHHNDRPLKAFDADLVKDLMAAMTADGITFDLNTDVQAITKTATGLQLTADNFELTTDLVISSAGRIPNADQLGLANVGVTFDRHGIQVNDHLQTANPHIYAIGDVSDTPVPKLTPVAGFEARYLVGELTHPGAAIKYPVVPTQVFAAPKLAQVGISAAAATEHPDEYRVNTLDMTKWFTYYRFGAQQAQAKIVVAKASGQVVGATLLSDVADEMINYFTLLIEKHVTLPDLQRLVLAYPTPASDLQYLY
>CP035113.1|QAR36722.1|336282_337254_+|ABC-transporter-ATP-binding-protein
MTTAIEFQHVQKDFNGQTVIPDLNLTIDQGELFVLVGTSGSGKTTSLKMINCLEPLTAGKILVNGTDTTTIPVRSLRWQMGYVLQQIALFPTMTVAQNIAVIPEMKGTAKKEINQTIDELLAEVGLDPKEYRDRMPSELSGGEQQRIGILRAIAAQPDIVLMDEPFSALDPISRQQLQDLVLRLHARYHNTIVFVTHDMNEALKLGDRIGVMQHGQLIQVDTPAALAQHPVNDFVRNFFGASRAKNVYDVYVGRVGLIQGYLTEKPSVASGRIQSLDVQATLRTAFTALTDHDYVAVTEENRVVGYLDRQRIVAYLSQHEEVS
>CP035113.1|QAR36721.1|334755_336282_+|ABC-transporter-permease/substrate-binding-protein
MQTLIQTFIDRRGDLLTALWQHLGISLASLVIAMVIAIPLAIWVVRRPRWAEGLLQLTSVLQTIPSLALLGLLIPLVGIGTVPAVIALVIYALLPIFQNTYLGISEIDASIEEAADAFGMSRMRKLFKVELPIALPQIIAGIRTALVLIIGTATLAALIGAGGLGTFIMLGIDRNDTSLLLIGAISSALLAILLSALVRWFQTAKPRHALIVFVGILALLGGGGAYSVYANRVETITIAGKLGSEPEILINMYKQLIEAEDEHVHVTLKPNFGKTTFLFSALKNNQVDIYPEFTGSVLETLVKGNNPAGQTANQTYQLAKQRLAKQEQMTYLKPMQYNNTYALAVTKKFQQEHHLKTISDLTQVESILKPGMTLEFIDRNDGLKGIKKTYGLDVTAKSMEPALRYEAISKGKINLVDAYATDSELRQYHLALLKDNKHFFPTYQGAPLMKTSFANKHPKVVKALNKLAGKISETDMQEMNYEVNVKKQSASTVAHRYLVKHGLLKEGR
>CP035113.1|QAR36720.1|334071_334518_-|ribonuclease-H
MATIHLYLASTNHQLTNITATTPAAWVVILRYADHQKTLNDGGYGYTETSLALSALTTALATLKRHDLPVHIHTTTEQVAAVISEQRYLSWRQNNWDVPEADQPDLPQWQTLIPIIEKFPNLTITYHPVDDPAMTTATTTLTAVMTKL
>CP035113.1|QAR36719.1|332019_333900_+|hypothetical-protein
MVIVGGLVSILTVGISYCCYLVKHAGVTNLLTIILSLGCVMATLGLTIMMPGLPEKIGVIGVVILAATMNYLMFWHEKRTAREDDTQFDWIDSGNQHMGFQHIIQNHGEAFAAQGVSQTAIPKLVAKAVNSYHRSWGHFDKWQPYHRVLLTIHYRYRKHLLAVTLSRDQYIISAYPAPLLDKYPRVKKIRIMLEYGCYPIWLYDEKGNLISNDLPQVLRKDATLNKKLLVLQKQYDSLFTNNQHDFSYNGFATAADEQQFLRAFMVIHKDLKRRLGGKYAVLNKITGKVDKVFPTATTVASSQAIPSEAELNSAIVNKPKPVVDKKAKTHVRTYPGLKADLLKVYQNFDIENLGPTYDALVDITKLYRRRFTKYTGQVTLKTVQQSTAKDYILGHTDKNLSEIVANNKDMVAKNIGNAAMCRQVMQLIDIMSRYTLDELCFKCNLARLQLSTTNAHKRLLKTCPDCGAVFVNNKLTNITITGLPANKLQVKMYLRKTGVVSMAAATESIDTTMPKRKIRLFMEWGSSFIWVYNEDNELIKNGLPDELYPDSGLVAKVNVLNRQYSELFTNNGYEFRYNGFKTHEDENAFERDFNAIYEEIAERTRGKYRVINEYYFTSNTEDVRDL
>CP035113.1|QAR36718.1|330680_331580_+|oxidoreductase
MSQPRVILITGASSGIGKATALKLQAQGNIVYGAARRIEKMTDLAAAGVHVLKVDVTDEATLIAAVKTIQVEQGRIDVLINNAGYGSYGSLEDVPVAEGEYQFKVNVFGVMRLTQLVLPLMRAQHRGRIINVSSIGGKIYQPLSAWYMGTKHAIEGMSDSLRMEVAPFGIDVVIVEPGGIKTEWAGIAEKKLLAVSGEMAYHEQAVKVGAMLSLFDQFASNPGVIAKLMVHAVNDVKPKTRYHAGMGAGVSLTARQWLSDRQFDRIMNSAVNGAAKLSKVTRRKDRRTGSRHYRHGKIG
>CP035113.1|QAR39168.1|349093_349324_+|hypothetical-protein
MVEYSRRKVIPGGEITESQKITEQQLLTSLRAAVKEAMSRGYTYEVPIRIDNWELIFSSPRRVGQLPVLIHARYIP
>CP035113.1|QAR39169.1|349354_349870_+|hypothetical-protein
MKVEKLENNVSKEEMEIDYYVPVSISFPENDLEEEGLYYYRFINKEYSFIEFKINSVSKKIVNVTVTSINDIQNGEFIFNGSISKANPIIDIYEFEYEAVITNNNSFEFYMGEKKIFFILDNEEISSMIMISNHFFALLNSENDIVGAQIANFNDEDWNALVGNLKEAGKI
>CP035113.1|QAR36728.1|349987_350266_+|hypothetical-protein
MLVFIVIGLITAVITIGLGYWSYILGKRNKSNLVGSVIPVGYFIVRLVFVLVLGEGVRELITSLVGNLVITVIYVLLFVWGRQRFNRQKQTK
>CP035113.1|QAR36729.1|350933_351200_+|hypothetical-protein
MKHVASIRKITGKKLLTKNEYKKEAISVVKHGKYVPKLHAFIKKATKAKKKRDGYNYEFVGIDIKTARITTLHVKTTRVLRKKGVILE
>CP035113.1|QAR36730.1|351228_351621_+|hypothetical-protein
MIRVLQVDPPDDPEYRDPFVLLSDGNMQIWVFADEFNNKIGDKYQYPYMTLFPLLEGDVEMQKGKVFAVKALSDIQYSYDLYGQINENWKLKVGEFVIDSGEENYEGFKRGDFVHFRCDRVDLIDFNKFI
>CP035113.1|QAR36731.1|351836_352157_+|hypothetical-protein
MFTKYNDLDLLELFWSESESLTGEIDDGEVLYRREISDFELTLFIYTYEMKCNVFLSYKDEDILSIELDNISELKKNEDQLYFYSNESVKLSVIFGKIFSINFQDK
>CP035113.1|QAR36732.1|353303_353567_+|hypothetical-protein
MATIIIIGVVIIGITLGLGYWSYLLGKKNQSNFVGTIIPVAYFAVRAILAVMTQTATHGLVSSLVGSLLFSLIYYGLFVWGKHRANK
>CP035113.1|QAR36733.1|353668_353947_+|hypothetical-protein
MLVFIVIGLITAVITIGLGYWSYILGKRNKSNIVGSVIPVGYFIVRLVFVLVLGEGVRELITSLVGNLVITVIYVLLFVWGRQRFNKQKQTK
>CP035113.1|QAR39170.1|354035_354134_+|hypothetical-protein
MTDLVGYNDIYTMITGKDAATGKKRSRLVGAA
>CP035113.1|QAR36734.1|354140_354320_+|hypothetical-protein
MNFVPVSKVAKLAKAVKILATSKKAEILAKRKPAPKAKHQQAKPKKTSHGTKHKTTKKQ

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Crispr_ID: CP035113_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP035113_2

1084172-1088205

Orphan

Consensus_repeat	Method
AGNGANTCNGANTCNGANAGTGANTCNNNNNN	CRT

45 spacers

The CRISPR arrays of CP035113_2

>merge|CP035113|2|1084172-1088205|CRT
AGCGATTCCGACTCAGACAGCGACTCGGATTCTGATAGTGACTCAGATTCCGACAGTGATTCCGACTCTGACAGTGACTCTGATTCCGATAGTGATTCCGACTCGGACAGTGATTCAGATAGCGACAGTGATTCCGACTCGGACAGCGATTCAGATAGCGACAGTGATTCCGACTCGGATAGTGATTCGGATTCCGACTCAGACAGCGATTCAGACTCCGATAGTGACTCCGATTCTGACAGTGATTCCGACTCTGATAGTGACTCCGACAGCGATTCCGACTCAGATTCCGATAGTGATTCGGATTCAGACAGTGACTCGGATTCGGATAGTGATTCAGATAGCGACAGTGATTCCGACTCGGATAGTGACTCAGATTCCGATAGTGATTCGGACAGCGACAGTGACTCCGATTCGGACTCGGATAGTGATTCCGACTCCGACAGTGACTCCGACTCTGATAGTGATTCCGATTCGGATAGTGACTCCGACAGCGATTCCGACTCAGATTCCGATAGTGATTCGGATTCCGACAGTGACTCCGACTCCGACAGTGATTCGGACTCGGACAGTGACTCGGATAGTGATTCGGACTCGGATAGTGATTCCGACTCCGACAGTGACTCGGATTCGGATAGTGATTCGGATTCAGACAGTGACTCAGACTCGGATAGTGATTCCGACTCCGACAGCGATTCTGACTCCGACAGCGACTCGGATTCGGATAGTGACTCCGACAGTGATTCAGATAGCGACAGTGATTCAGATAGCGACAGTGACTCCGACTCGGACAGTGATTCGGATAGCGACAGTGACTCAGATTCGGACAGTGATTCTGACTCGGATAGTGATTCTGACTCTGATAGTGATTCCGATTCGGATAGCGACTCCGATTCAGACAGTGATTCCGACTCTGATAGCGACTCAGATTCAGACAGTGATTCCGACTCCGATAGCGACTCAGATTCCGACAGTGATTCTGACTCGGACAGCGATTCGGACTCCGACAGCGACTCCGATTCAGACAGTGATTCGGACTCCGACAGTGATTCGGATAGCGACAGTGACTCCGATTCAGACAGTGATTCGGACTCCGACAGTGATTCGGATAGCGACAGTGACTCCGACTCGGATAGTGATTCCGATTCCGACAGTGATTCGGACTCCGACAGCGATTCGGATTCCGATAGTGATTCAGACTCCGATAGTGACTCCGATTCCGACAGTGATTCAGACTCCGACAGCGATTCGGATTCCGATAGCGATTCAGACTCGGATAGTGACTCAGATTCCGATAGTGATTCGGACAGCGACAGTGACTCAGATTCGGACAGTGATTCGGACTCGGACAGCGATTCAGACTCCGATTCGGACAGCGACAGTGACTCCGACTCCGATAGTGATTCCGATTCCGACAGTGATTCGGACTCCGACAGCGATTCGGATTCCGATAGTGATTCAGACTCGGATAGTGACTCAGATTCCGATAGTGATTCGGACAGCGACAGTGACTCCGATTCGGACAGTGATTCGGACTCGGACAGCGATTCCGACTCCGATTCGGACAGCGACAGTGACTCCGACTCAGACAGTGATTCGGACTCGGACAGCGACTCGGATTCGGATAGTGATTCTGACTCCGACAGTGACTCGGATTCGGATAGTGATTCGGATTCAGACAGTGACTCAGACTCTGATAGTGATTCGGACTCCGATAGCGACTCAGATTCAGACAGTGATTCGGATTCCGACAGCGACTCCGATTCCGACAGTGATTCCGATTCCGACAGTGATTCGGACTCCGACAGCGATTCGGATTCCGATAGTGATTCAGACTCGGACAGCGACTCGGATTCGGATAGTGATTCGGACTCGGACAGCGACTCGGATTCGGATAGTGATTCAGACTCGGACAGCGATTCCGATTCCGACAGTGATTCGGATAGCGACAGTGACTCAGACTCTGATAGTGATTCGGACTCGGACAGCGACTCGGATTCCGATAGCGATTCAGACTCGGACAGCGATTCAGATTCCGACAGTGATTCGGATTCCGACAGTGACTCGGACTCCGACAGTGATTCGGATAGCGACAGTGATTCAGACTCCGACAGTGATTCGGATAGCGACAGTGACTCAGATTCCGACAGCGATTCAGACTCGGATTCGGACAGTGATTCGGATTCGGATAGCGATTCCGACAGTGACTCAGACTCTGATAGTGATTCGGATTCAGACAGTGATTCCGACTCGGACAGCGACTCGGATTCGGATAGTGATTCAGACTCCGACAGTGATTCTGATAGTGACAGTGACTCCGACTCGGACAGCGATTCAGACTCAGACAGTGATTCCGACTCGGACAGCGACTCCGATTCTGACAGTGATTCCGACTCGGATAGTGACTCGGATTCTGACAGTGATTCCGATTCCGACTCGGACAGCGATTCCGATTCTGACTCAGACAGTGATTCTGACTCCGACTCGGATAGTGATTCTGATTCTGACAGTGATTCCGACTCAGACAGTGACTCGGATTCGGACAGCGACAGTGACTCCGACTCGGATAGTGATTCTGACTCCGACAGTGACTCAGACTCTGATAGTGATTCGGATTCTGATAGTGATTCCGATTCGGATAGTGATTCAGATAGCGACAGCGACTCAGATTCCGACAGTGATTCGGATTCGGATAGCGATTCCGATTCCGACAGTGACTCCGACTCGGATAGTGATTCCGACTCAGACAGTGATTCCGATTCCGACAGCGATTCGGATTCGGATAGTGATTCAGATTCCGACTCGGACAGCGACTCCGACTCAGACAGTGATTCGGATAGCGACAGTGACTCAGATTCCGACAGCGATTCCGATTCCGATAGTGACTCCGACTCTGATAGTGATTCGGATTCAGACAGTGATTCGGACTCGGATAGTGACTCGGATTCCGATAGTGATTCGGACAGCGACAGTGATTCGGACTCGGATAGTGATTCAGATAGCGACAGCGATTCCGACTCTGATAGCGATTCCGATTCCGATAGTGACTCAGACAGTGATTCTGATTCCGATAGCGACTCAGATACTGACAGTGATTCGGACTCGGATAGTGATTCGGACAGCGACTCAGATTCCGATAGTGATTCTGACTCTGATAGTGATTCCGATTCCGACAGTGACTCCGACTCTGATAGCGACAGCGATTCCGACAGCGATTCAGACTCAGACAGTGATTCCGATTCGGACAGTGATTCGGATAGCGACAGTGACTCAGACTCTGATAGTGATTCCGATTCTGACAGTGATTCTGACTCAGACAGCGACTCAGACTCAGATAGTGACTCCGATTCCGACAGCGATTCCGACTCTGATAGTGATTCCGATTCTGACAGTGATTCGGATAGCGACAGCGACTCAGACTCCGACAGTGACTCAGATAGCGACAGCGATTCGGATTCCGATAGTGATTCCGACTCAGACAGTGATTCCGATTCCGACAGCGACTCGGATTCCGATAGCGATTCCGACTCGGACAGCGACTCAGACTCTGACAGTGATTCGGATAGCGACAGTGACTCGGATTCCGATAGTGACTCCGATTCGGACTCTGACAGTGATTCGGATAGCGACAGTGACTCGGATTCGGATAGTGATTCCGACTCAGACAGCGATTCCGATAGTGACTCCGATTCGGACTCGGATAGTGATTCCGATTCGGACAGCGATTCGGATTCCGACAGTGATTTGGACTCTGACAGTGATTCGGACTCTGACAGTGATTCGGACTCGGACAGCGATTCGGACTCGGACAGCGATTCGGACTCGGATAGTGATTCGGATTCCGACAGCGACTCAGATTCTGACAGTGATTCGGATTCGGATAGCGATTCGGATTCCGACAGCGACTCGGATTCCGATAGTGATTCCGACTCGGATAGTGATTCGGATTCCGACAGTGACTCAGACTCGGACAGCGACTCAGGTTCCGACAACGACTCAGACTCAGACAGTGATTCGAATAACGACAGTGACTC

>CP035113|2|2|1084172-1088205|CRT
AGCGATTCCGACTCAGACAGCGACTC	GGATTCTGATAGTGACTCAGATTCCGACAGTGATTCCGACTCTGACAGTGACTCTGATTCCGATAGTGATTCCGACTCGGACAGTGATTCAGATAGCGAC
AGTGATTCCGACTCGGACAGCGATTC	AGATAGCGACAGTGATTCCGACTCGGATAGTGATTCGGATTCCGACTCAGACAGCGATTCAGACTCCGATAGTGACTCCGATTCTGAC
AGTGATTCCGACTCTGATAGTGACTC	CGACAGCGATTCCGACTCAGATTCCGATAGTGATTCGGATTCAGACAGTGACTCGGATTCGGATAGTGATTCAGATAGCGAC
AGTGATTCCGACTCGGATAGTGACTC	AGATTCCGATAGTGATTCGGACAGCGACAGTGACTCCGATTCGGACTCGGATAGTGATTCCGACTCCGACAGTGACTCCGACTCTGAT
AGTGATTCCGATTCGGATAGTGACTC	CGACAGCGATTCCGACTCAGATTCCGATAGTGATTCGGATTCCGACAGTGACTCCGACTCCGAC
AGTGATTCGGACTCGGACAGTGACTC	GGATAGTGATTCGGACTCGGATAGTGATTCCGACTCCGACAGTGACTCGGATTCGGAT
AGTGATTCGGATTCAGACAGTGACTC	AGACTCGGATAGTGATTCCGACTCCGACAGCGATTCTGACTCCGACAGCGACTCGGATTCGGATAGTGACTCCGAC
AGTGATTCAGATAGCGACAGTGATTC	AGATAGCGACAGTGACTCCGACTCGGACAGTGATTCGGATAGCGAC
AGTGACTCAGATTCGGACAGTGATTC	TGACTCGGATAGTGATTCTGACTCTGATAGTGATTCCGATTCGGAT
AGCGACTCCGATTCAGACAGTGATTC	CGACTCTGATAGCGACTCAGATTCAGACAGTGAT
TCCGACTCCGATAGCGACTCAGATTC	CGACAGTGATTCTGACTCGGACAGCGATTCGGACTCCGAC
AGCGACTCCGATTCAGACAGTGATTC	GGACTCCGACAGTGATTCGGATAGCGAC
AGTGACTCCGATTCAGACAGTGATTC	GGACTCCGACAGTGATTCGGATAGCGACAGTGACTCCGACTCGGAT
AGTGATTCCGATTCCGACAGTGATTC	GGACTCCGACAGCGATTCGGATTCCGATAGTGATTCAGACTCCGAT
AGTGACTCCGATTCCGACAGTGATTC	AGACTCCGACAGCGATTCGGATTCCGATAGCGATTCAGACTCGGAT
AGTGACTCAGATTCCGATAGTGATTC	GGACAGCGACAGTGACTCAGATTCGGACAGTGATTCGGACTCGGACAGCGATTCAGACTCCGATTCGGACAGCGAC
AGTGACTCCGACTCCGATAGTGATTC	CGATTCCGACAGTGATTCGGACTCCGACAGCGATTCGGATTCCGATAGTGATTCAGACTCGGAT
AGTGACTCAGATTCCGATAGTGATTC	GGACAGCGACAGTGACTCCGATTCGGACAGTGATTCGGACTCGGACAGCGATTCCGACTCCGATTCGGACAGCGAC
AGTGACTCCGACTCAGACAGTGATTC	GGACTCGGACAGCGACTCGGATTCGGATAGTGATTCTGACTCCGACAGTGACTCGGATTCGGATAGTGATTCGGATTCAGAC
AGTGACTCAGACTCTGATAGTGATTC	GGACTCCGATAGCGACTCAGATTCAGACAGTGATTCGGATTCCGACAGCGACTCCGATTCCGAC
AGTGATTCCGATTCCGACAGTGATTC	GGACTCCGACAGCGATTCGGATTCCGATAGTGATTCAGACTCGGACAGCGACTCGGATTCGGATAGTGATTCGGACTCGGACAGCGACTCGGATTCGGAT
AGTGATTCAGACTCGGACAGCGATTC	CGATTCCGACAGTGATTCGGATAGCGACAGTGACTCAGACTCTGATAGTGATTCGGACTCGGACAGCGACTCGGATTCCGAT
AGCGATTCAGACTCGGACAGCGATTC	AGATTCCGACAGTGATTCGGATTCCGACAGTGACTCGGACTCCGACAGTGATTCGGATAGCGAC
AGTGATTCAGACTCCGACAGTGATTC	GGATAGCGACAGTGACTCAGATTCCGACAGCGATTCAGACTCGGATTCGGACAGTGATTCGGATTCGGATAGCGATTCCGAC
AGTGACTCAGACTCTGATAGTGATTC	GGATTCAGACAGTGATTCCGACTCGGACAGCGACTCGGATTCGGAT
AGTGATTCAGACTCCGACAGTGATTC	TGATAGTGACAGTGACTCCGACTCGGACAGCGATTCAGACTCAGAC
AGTGATTCCGACTCGGACAGCGACTC	CGATTCTGACAGTGATTCCGACTCGGATAGTGACTCGGATTCTGACAGTGAT
TCCGATTCCGACTCGGACAGCGATTC	CGATTCTGACTCAGACAGTGAT
TCTGACTCCGACTCGGATAGTGATTC	TGATTCTGACAGTGATTCCGACTCAGACAGTGACTCGGATTCGGACAGCGAC
AGTGACTCCGACTCGGATAGTGATTC	TGACTCCGACAGTGACTCAGACTCTGATAGTGATTCGGATTCTGAT
AGTGATTCCGATTCGGATAGTGATTC	AGATAGCGACAGCGACTCAGATTCCGAC
AGTGATTCGGATTCGGATAGCGATTC	CGATTCCGACAGTGACTCCGACTCGGATAGTGATTCCGACTCAGACAGTGATTCCGATTCCGAC
AGCGATTCGGATTCGGATAGTGATTC	AGATTCCGACTCGGACAGCGACTCCGACTCAGACAGTGATTCGGATAGCGACAGTGACTCAGATTCCGAC
AGCGATTCCGATTCCGATAGTGACTC	CGACTCTGATAGTGATTCGGATTCAGACAGTGATTCGGACTCGGAT
AGTGACTCGGATTCCGATAGTGATTC	GGACAGCGACAGTGATTCGGACTCGGATAGTGATTCAGATAGCGACAGCGATTCCGACTCTGAT
AGCGATTCCGATTCCGATAGTGACTC	AGACAGTGATTCTGATTCCGATAGCGACTCAGATACTGACAGTGATTCGGACTCGGATAGTGATTCGGAC
AGCGACTCAGATTCCGATAGTGATTC	TGACTCTGATAGTGATTCCGATTCCGACAGTGACTCCGACTCTGATAGCGACAGCGATTCCGAC
AGCGATTCAGACTCAGACAGTGATTC	CGATTCGGACAGTGATTCGGATAGCGACAGTGACTCAGACTCTGATAGTGATTCCGATTCTGACAGTGATTCTGACTCAGAC
AGCGACTCAGACTCAGATAGTGACTC	CGATTCCGACAGCGATTCCGACTCTGATAGTGATTCCGATTCTGACAGTGATTCGGATAGCGAC
AGCGACTCAGACTCCGACAGTGACTC	AGATAGCGACAGCGATTCGGATTCCGATAGTGATTCCGACTCAGACAGTGATTCCGATTCCGACAGCGACTCGGATTCCGATAGCGATTCCGACTCGGAC
AGCGACTCAGACTCTGACAGTGATTC	GGATAGCGACAGTGACTCGGATTCCGATAGTGACTCCGATTCGGACTCTGACAGTGATTCGGATAGCGAC
AGTGACTCGGATTCGGATAGTGATTC	CGACTCAGACAGCGATTCCGATAGTGACTCCGATTCGGACTCGGATAGTGATTCCGATTCGGACAGCGATTCGGATTCCGACAGTGATTTGGACTCTGAC
AGTGATTCGGACTCTGACAGTGATTC	GGACTCGGACAGCGATTCGGACTCGGACAGCGATTCGGACTCGGATAGTGATTCGGATTCCGAC
AGCGACTCAGATTCTGACAGTGATTC	GGATTCGGATAGCGATTCGGATTCCGACAGCGACTCGGATTCCGATAGTGATTCCGACTCGGAT
AGTGATTCGGATTCCGACAGTGACTC	AGACTCGGACAGCGACTCAGGTTCCGACAACGACTCAGACTCAGAC
AGTGATTCGAATAACGACAGTGACTC

Protein	Signature genes	Signature genes Name	Protein_function
CP035113.1\|QAR37375.1\|1072384_1073314_+\|homocysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|181899
CP035113.1\|QAR37385.1\|1095724_1098151_+\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743
CP035113.1\|QAR37374.1\|1070888_1072271_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|236904
CP035113.1\|QAR39185.1\|1073714_1075211_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340855
CP035113.1\|QAR37370.1\|1066610_1067447_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|378975
CP035113.1\|QAR37387.1\|1100352_1101093_+\|16S-rRNA-pseudouridine(516)-synthase	unknown	unknown	gnl\|CDD\|211327
CP035113.1\|QAR37383.1\|1093982_1094579_-\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|377744
CP035113.1\|QAR37384.1\|1094578_1095229_-\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239486
CP035113.1\|QAR37372.1\|1068285_1069611_-\|divalent-metal-cation-transporter-MntH	unknown	unknown	gnl\|CDD\|234815
CP035113.1\|QAR37380.1\|1090614_1092123_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340855
CP035113.1\|QAR37382.1\|1093689_1093887_+\|hypothetical-protein	unknown	unknown	unknown
CP035113.1\|QAR37371.1\|1068045_1068243_+\|hypothetical-protein	unknown	unknown	unknown
CP035113.1\|QAR37381.1\|1092133_1093660_+\|accessory-Sec-system-glycosyltransferase-Asp1	unknown	unknown	gnl\|CDD\|340855
CP035113.1\|QAR37377.1\|1076219_1077407_+\|methionine-adenosyltransferase	unknown	unknown	gnl\|CDD\|235374
CP035113.1\|QAR37386.1\|1098674_1100345_+\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|240529
CP035113.1\|QAR37388.1\|1101229_1102066_-\|NAD(P)H-hydrate-dehydratase	unknown	unknown	gnl\|CDD\|238576
CP035113.1\|QAR37379.1\|1088953_1090588_+\|glycosyl-transferase-family-1	unknown	unknown	unknown
CP035113.1\|QAR37378.1\|1077542_1079045_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341045
CP035113.1\|QAR37373.1\|1069582_1070557_-\|ferrochelatase	unknown	unknown	gnl\|CDD\|366291
CP035113.1\|QAR37376.1\|1075286_1076006_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP035113.1\|QAR37375.1\|1072384_1073314_+\|homocysteine-S-methyltransferase	gnl\|CDD\|181899	PRK09485, mmuM, homocysteine methyltransferase; Provisional.	9.13409e-160
CP035113.1\|QAR37385.1\|1095724_1098151_+\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
CP035113.1\|QAR37374.1\|1070888_1072271_-\|amino-acid-permease	gnl\|CDD\|236904	PRK11387, PRK11387, S-methylmethionine permease.	0
CP035113.1\|QAR37370.1\|1066610_1067447_-\|metallophosphoesterase	gnl\|CDD\|378975	pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain. Members of this family are part of the Calcineurin-like phosphoesterase superfamily.	3.97199e-10
CP035113.1\|QAR37387.1\|1100352_1101093_+\|16S-rRNA-pseudouridine(516)-synthase	gnl\|CDD\|211327	cd02553, PseudoU_synth_RsuA, Pseudouridine synthase, Escherichia coli RsuA like. This group is comprised of eukaryotic and bacterial proteins similar to Escherichia coli RsuA. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. E.coli RsuA makes psi516 in 16S RNA. Psi at this position is not generally conserved in other organisms.	6.60255e-87
CP035113.1\|QAR37383.1\|1093982_1094579_-\|SAM-dependent-methyltransferase	gnl\|CDD\|377744	pfam06962, rRNA_methylase, Putative rRNA methylase. This family contains a number of putative rRNA methylases. Note that many family members are hypothetical proteins.	9.5138e-67
CP035113.1\|QAR37384.1\|1094578_1095229_-\|phosphatase-PAP2-family-protein	gnl\|CDD\|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	1.68047e-45
CP035113.1\|QAR37372.1\|1068285_1069611_-\|divalent-metal-cation-transporter-MntH	gnl\|CDD\|234815	PRK00701, PRK00701, divalent metal cation transporter MntH.	1.03329e-148
CP035113.1\|QAR37380.1\|1090614_1092123_+\|glycosyltransferase	gnl\|CDD\|340855	cd04949, GT4_GtfA-like, accessory Sec system glycosyltransferase GtfA and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria.	4.31662e-70
CP035113.1\|QAR37373.1\|1069582_1070557_-\|ferrochelatase	gnl\|CDD\|366291	pfam00762, Ferrochelatase, Ferrochelatase.	1.80767e-117
CP035113.1\|QAR37377.1\|1076219_1077407_+\|methionine-adenosyltransferase	gnl\|CDD\|235374	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated.	0
CP035113.1\|QAR37386.1\|1098674_1100345_+\|polysaccharide-biosynthesis-protein	gnl\|CDD\|240529	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins. The integral membrane protein SpoVB has been implicated in the biosynthesis of the peptidoglycan component of the spore cortex in Bacillus subtilis. This model represents a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	7.02708e-131
CP035113.1\|QAR39185.1\|1073714_1075211_+\|glycosyltransferase	gnl\|CDD\|340855	cd04949, GT4_GtfA-like, accessory Sec system glycosyltransferase GtfA and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria.	2.72308e-88
CP035113.1\|QAR37378.1\|1077542_1079045_+\|MFS-transporter	gnl\|CDD\|341045	cd17502, MFS_Azr1_MDR_like, Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.26448e-72
CP035113.1\|QAR37381.1\|1092133_1093660_+\|accessory-Sec-system-glycosyltransferase-Asp1	gnl\|CDD\|340855	cd04949, GT4_GtfA-like, accessory Sec system glycosyltransferase GtfA and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria.	1.83734e-108
CP035113.1\|QAR37388.1\|1101229_1102066_-\|NAD(P)H-hydrate-dehydratase	gnl\|CDD\|238576	cd01171, YXKO-related, B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.	1.23621e-84

>CP035113.1|QAR37378.1|1077542_1079045_+|MFS-transporter
MQQRKTNVMAVTVAIYVATFMSAIEGTIVSTALPTIVGDLHGVSLMNWVFSIYLLTNAMMTPIYGKLTDLVGRKPVMQAGLIIFIIGSMMSGLSNSMPVLIFWRAIQGIGAGALMPVSMTIIADIYSFERRAKVLGFNSSAWGIASVLAPLIGGLIVDKLSWHWIFFINVPVGLITLFLFQFYLREPKRHNNVKIDYLGSFWLMLFLLCLMLSFQLLGNATISWVAVGTAWIISALSLWLFIRRESRTDEPVISMDLFKNHTFIIQNAVAALVSGFLMAVEVYIPTWTQGILGVPASLAGFAVTPSSLMWIVGSFVTGRLLAKWAPRRILYLSLAFILVTSICLAWLPVNTAFPWFFLITAIGGVGFGITITATTVTSQHLVPAENVGVATSFNTLSRTIGQTLMISIFGIALNVGMNQGIQHHAGTNMAMMNKLINPQTATQLPSHLLPTLHRILYTGLHWVYLIGLGLVILAFIVNSLDRGPQKTAAQHAADLNQNQD
>CP035113.1|QAR37377.1|1076219_1077407_+|methionine-adenosyltransferase
MSERHLFTSESVSEGHPDKIADQISDAILDAMLAQDPQARVAVETSVTTGLVLVFGEVSTKAYVDIQKVVRDTIKSIGYVDGQYGFDGDNCAVLVSLDEQSPDIAQGVDDSLETRSGDADPLDQIGAGDQGMMFGYAINETPELMPLPIALSHRLMRKIAALRKDGTIKWLRPDAKAQVTVEYDEDNQPKRIDTVVLSTQHDPDVDLDTIRQTVIDQVIKAVLPADLLDDQTKYLVNPTGRFVIGGPQGDAGLTGRKVIVDTYGGFAHHGGGAFSGKDATKVDRSASYAARYIAKNVVAAGLADQVEVQLAYAIGVAEPVSIAVDTAGTGKVSDEALINAIRENFDLRPAGIIKMLDLQRPIYRQTAAYGHFGRTDIDLPWEHTDKVDALKAAFK
>CP035113.1|QAR37376.1|1075286_1076006_-|hypothetical-protein
MIRIGKLHIKRDYIALAIFTIVQSIISWWAALDYGRSFQTASFSAAQLPLIGYTLAVAAAVFIILDRRIAPQWSLIAIGITVAFAFTNIIAKESELLYLLLTCSAWLLVMAVPRFGMQNYFGLVVFGVIMTFTIPVAVFDLQNNYLSTTFLWKLTPMLASYVFLYVPSFSRQRQINQLISAITGLLLVITIFLQPLTWQTIVAILITIAVWFSQQSFGRTRLHLMINVAVQLALILLLY
>CP035113.1|QAR39185.1|1073714_1075211_+|glycosyltransferase
MYYFVGTGLGLKLTGIEKAQLNRLALFDAAGYQARCVYVTYNPRLHEHAARFGAEGKCFSLYDFFQGTMPEAVTKIHHDWMHYWQAVCHFKVIQVPNTTDFRVLDTDGQYLMYVHFVDAGRQQLDYVNYFDNQGVKVRREFYDNRGFLSRTSFLVKHQEVHTEVYYDLQGQVKIIKQYDITGPEPKLRLITLKNYQQRDFFFNTEQAFQTFFFNELATADDVYFCDRNRQTAAALGHTRPAIRVCSVLHSTHLRIGEDVVSGHLKSVYRYVLVHPDQFHRIIVSTEHQKRDLLARYDNLPPVVVIPVGYTTVHPVKIDGRDPHRIISVARYSPEKQLPHQLEVVRRLVGEFPDLTLQLFGHGQKIEMQMRQFIQANHLEKNIVIRGFLPNLAEEYQRASLALMTSVEEGFSLATMEAESYGVPVIGYRIAYGPEDIIEDGVNGYLVTPNDVNELTMKVRQYLQHPERQAQLITNAYNSATRYSKQTIIEKWRQLIAAL
>CP035113.1|QAR37375.1|1072384_1073314_+|homocysteine-S-methyltransferase
MLSLTEQLNRGPVVSDGAMATELEKRGVATNSALWSATAMLDHPDAIQAVHQSYLDAGAKIMTTNTYQANVPAFEQAGIAAAQARQLIQQAVTIAHTARDASHVTDAVIAGSIGPYGAYLADGSEYTGAYQLTPSAYQDFHRERLALIMAAGVDVLALETMPRLDEVQALVQLITTTWPQQPYWVSFSIKDPQTLCDGTSLAVAAKWVAAQPNVVAVGVNCTTLENIAPALTTLKAAVAVLLIVYPNSGDQYDPVTKTWQETHLSHQFASFVPQWLAAGARIIGGCCRTTPKDIATVARALSVSDSAKL
>CP035113.1|QAR37374.1|1070888_1072271_-|amino-acid-permease
MSKQTHLSRQMESRHVLMISLGGVIGTGLFLSSGYTIHQAGPIGTLLAYTIGAILVYLVMLCLGELSVAMPYTGAFHVYAKKYIGPGTGFTVAILYWLTWTIALGSEFTAAGLIMQTWFPHIATWIWSLVFMVVIFTVNALSVRWFAEAEFWFASIKVIAIIAFIVLGGLAMVGILPLHGHTSAPFLSNYTRNGWFPNGFGGVFTTMLTVNFAFSGTELIGITAGETKDPAHTIPTAIKTTLWRLIIFFIGSMFVMAALIPYKQAGVTQSPFVLVFKAIGIPYAADLMNFVVLTAIMSAANSGLYASTRMLWSLANEGTIPKVFKRTTKRDVPLVALITSMLGGILALLSSVYAAGSVYLVLVSISGLAVVIVWMAIALSEINFRKAYLKSGQSLDQLTFKTPGYPVVPWLAFILSGLSCILIWFDPNQRIALYYTIPFVAICYLGYYLNQRYRRTHAAK
>CP035113.1|QAR37373.1|1069582_1070557_-|ferrochelatase
MHPGLLLVNLGSPASPRTKDVKTYLQEFLSDPSVIEMPAVLWQPLLRGIILPTRSWRSATFYQDSWLPQGSPLIVYSQAICQQVQAALPDWDVRLAMTYGQPDIGATLKAMVADGCEKPIILPLFPQYTQSTHGGIHRQVEATGLPHTFIDSFYDQPTYIHLLATKVWQSYQAHHYDAVIFSYHSIPTAMVRHGDPYQRECEATTKAVLAERPELPADKVITAYQSKFGPMPWLKPYLKNELMQLVELGKRNVLVVTPSFVVDCLETLEEDYVQNYQTFRASGGDRFDLVPPMNKDTGFSQFLADLAIQKQEASNHAITSSSKS
>CP035113.1|QAR37372.1|1068285_1069611_-|divalent-metal-cation-transporter-MntH
MQSHRHQSLEEINQSVAVPDVHQTAFWRKFLAYSGPGALVAVGYMDPGNWLTSLAGGGQFQYRLLAVLALAIIVAMFMQGLAIRLGVVARQDLAQAIASKLPRPVRYAVWILNEVAMMATDMTGVIGTAIALKMLFGLPLLAGILLTIADVLVVLLFLRFGIRRVEVIVLVAILTVGIIFGIEVGRAHVQFGNVLLGLVPTPLIVKNHTALVLSLGILGATIMPHNLYLHSSLAQSRRYDYHNPAQVTEALRFANWDSTVHLIAAFLINALLLVLGGTLFFGHTNALASLQAVFDGLKSTTVVGALASPVMSWLFALALLITGLISSITSTLAGQIVMEGYLHIRLPLWQRRLLTRAVTLIPILIIGMLVGFSDAAFENLIIYAQVALSIALPFTLLPLVALTNDASLMKAHVNRPAVTWVGYGLAGIITVLNIYLVYSLF
>CP035113.1|QAR37371.1|1068045_1068243_+|hypothetical-protein
MGAGCTGEFLPSIATSDNVAILSDRRYIAGYDYLSLKIGKLVSTIIELEYQKAINLRICFAVDGL
>CP035113.1|QAR37370.1|1066610_1067447_-|metallophosphoesterase
MVKIAVLSDVHGNATALEAVLADAQKQHVDEYWTVGDMTVRGPESERCLTLLDRVHPTAYVLGNHEENYQKVMAANPNTFTKPKQIMATVLTAFDRRQLSSTHFERLLNLPMTVIKHVGPLTIRLQHVLPTVASGHALAPTASQANFDQAAEGDVDIVIYAHTHQPIMRYATTGQLILNAGTVGLPTAINPHLRQPRANYLLLTIDETGLQHADYRAVDFDWQRAITIAQNTHLPYFEFYEQTLRTNTYQYAPSAVAAYNTQHDMAREARKILLENRH
>CP035113.1|QAR37379.1|1088953_1090588_+|glycosyl-transferase-family-1
MQKSVIQKLKQALIDNGNLESHENDMVVLAVSISDRRHRANVKFYRDKAFNTLWTTVANDLNTAPKNSWVRIDLVQAMQKLRRSIFETKLAKVPKMNYWRYGVSFDADFKHALLEMEINGQNFFKPDKDFVVGEPPAKSWADYHQIENYLRERESNPTIDISGAQNVWIFTTAAIFSDGQKIRPLAVDGFLTAGIRTITNKRKEIKKVIEDGEAYLINQLDKDGKFIYGYFPARQRVLSSYNILRHFSTIYALLETSQFSQHSESYRKAKLAIQWGIDASLVVIDNAAYVNDHGELKLGAQAMLILAICKYQEVTHDQIFLPTLKQLFKGVRSFWNSSTGFVHVLDVNLAPKGKFRTIYYDGEIVFALTRMYELDPSIQIEATISEMLDYMVKLDYGQYHDHWLAYAVNGALDLFPEARAYMALGAKNIFTHLNYIQRRKHASPTLLELINASQKMVYKVKKSGNDDLLAPYDVLKLSQLADQRASYEIQTGAWYAEIAMYLYHPQKFIGGFYARDDSFRTRIDDCEHFLSGLINYYNYTYRQA
>CP035113.1|QAR37380.1|1090614_1092123_+|glycosyltransferase
MFYFINEYILGKNSSVEHAAINRVKLFNHYKAPARIVTKMYDRLLHQTMGTFQLANQQVLNMFDYFQQTTDVPTKVLHTDDMHLPVEYAVEVGANFSKIFNGDEHVSNVGFIPGTIGRVFYQEFFDNQGNLSSTDLWDWRGFKSSTQYFGQNGKLVLERFYNLQGETVIEQYYVPDTNGNPLASRLILKNYRDQAERFFQDANHLFRFFLAELSHLDKQTTTFISDRPGTSVKPLLELQDDSHKYVTVPIYQAKDINDPIHSPLDGFLTPAFDNLQHFDGFITATESQAQHLRTRFPKAKVTVLPTVTTSPLAQSKLQPITARPKQLLYVGRLAPDRQLDQLIRTIALVKQQVKEIQCDFYGYGDPEYLKTLNKLVEELKLTNNVHLLDYHPDLETRYDDYQLLLNTDIVDGGPMSMPEAMSHGIPVISYRFNYGPKDWIDDGHDGFIVDPGNQLALRDRVIELMTDTKKLTAFSEAAFKKLHTSQTDLKVWHRWQQLLGIK
>CP035113.1|QAR37381.1|1092133_1093660_+|accessory-Sec-system-glycosyltransferase-Asp1
MYYFLNDNMQFSKSGIEQAEINRLTLFKKHHVAAKIVTRVFAMNLHDVLEGANIADADFVNLFDFFCGSQSVKRQRFDLADFEVPADAIKTRKDNQIQVMERGKLIMIIYLRAGTEAVSNVQYFDVNGRTLKMSWWDTRGFKCLEQLFDWDGKIAQEAYFGPDGLIHVEKLHLLNHAGQERITWRVLNYNEQSHTFNGMNELTRYFYDELNQLNDEQNVFICDRTVECAWGLFNMTTPAKKVLHLHNNHVSDAKDIMHSTLNNNYANALNNWAAWDAVISATPEQTKDVEARFGKDIPAFTIPVGYVDNATLKAAPVKFDQRQKDLVVQVARLAPEKQQNHSIEAFVEVHKQFPDAKLELWGYANGDIEKQLHAQVAAAHLEDVVLFKGYTTDVNAVYNRAQLGLLPSRAEGFSLMLLEAQAHGLPMVANDVKYGPSDIIQDHKSGILTTDGDVQQLTKTILELLKNQGQLAQYSAQAYENAKRYSEEAVFKQWQALLDYFKPAKVTA
>CP035113.1|QAR37382.1|1093689_1093887_+|hypothetical-protein
MLMIMTIYGTVKMFTRMIVYCGIGGLVLIVRHHNRKKRRNEMDEGTKRIMRNTPKDENGKYPWEK
>CP035113.1|QAR37383.1|1093982_1094579_-|SAM-dependent-methyltransferase
MHEFNKGVTLIQLSSALAYSHALMNQVVNPGDHVIDATVGNGHDTVYLANLVGTTGHVDGFDIQSAAIEATTTALDKAALTHQVTLWQTGHEHIADKIAADQPIKCAVFNLGYLPGGDKQIITKPTTTLTAIKAIQERLVTNGLIILLVYAGHPGGATEAQAVLDYVTNLDQHQFQVLQYQFINQVHVPPYLLAIQKR
>CP035113.1|QAR37384.1|1094578_1095229_-|phosphatase-PAP2-family-protein
MKQRSWQRSDSLILLIFIGWLGWTAAVWQRAPWLTHFDTTVANFWHHSPQWFQHAMVTYTQLGNPHTITIITLIIGLALWLGHNPRGAVFFWVTTWLIAGYGNYLIKQVIMRPRPTAWRLVQIGGYSYPSGHSTTTTVLIGSLLVLAFDYWHRNALTGWLTALGITAILLMMISRVIVGVHYPSDTIGGLLLGSVLLYISARFSMRYRHGPLRLRP
>CP035113.1|QAR37385.1|1095724_1098151_+|leucine--tRNA-ligase
MAYNHKVIERKWQHYWKENKTFKTLDTTDKKKYYALDMFPYPSGQGLHVGHPEGYTATDIMSRFKRMQGYNVLHPMGWDAFGLPAEQYALKTGHNPKDFTAKNIKNFKRQIRSLGFSYDWDREVNTTDPSYYKWTQWIFEQLYKKGLAYESETLVNWAPDMMGGTVVSNEEVVDGKTERGGYDVYRVPMKQWSLKITAYADRLIDDLDDIDWPENIKEQQRNWIGRSVGASIRFKVAGQPDDTEIEVFSTRPDTLFGASYMVLAPEHDLVEQLTTPEQADAIKAYKAKIASKSDLERTDLNKDKTGVFTGSYGINPVNGEKLPIWIADYVLASYGTGAIMAVPAHDDRDFEFAQKFDLPIKPVIAGDNDYDQQAYTGDGEHINSGFVDGLAKQPAIDKMIDWLGEHHAGEKKVNYRLRDWIFSRQRYWGEPIPVIHWEDGETTLVPEDELPLRLPATKNLEPSGTGESPLANIDDWVNVVDENGRKGKRETNTMPQWAGSSWYFLRYVDPHNREALADYDKLKYWSPVDLYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLVNQGMILGDNHEKMSKSRGNVVNPDDIVDQYGADTLRLYEMFMGPLEASIPWSTDGLHGANKWIERVWRLMIDENNRVRDRITTINDGKLTKIYNETVKKVTEDYEAMRFNIAISQMMVFVNEAYKVDDLPIIYIEGFVKLLSPIAPHLSEELWSLLGHDDTITYATWPTYDESKLVEDTVQIVLQVNGKVRSHAEVAKDMGKDELEKLALADEKIQEFTAGKTVRKVIAIPGKLVNVVAN
>CP035113.1|QAR37386.1|1098674_1100345_+|polysaccharide-biosynthesis-protein
MSEESKANQPQNAHVNSEAEAHQKMVRGSAWMTAGSLFSRVLGAIYIIPWVIWMGADYTQGNALYAKGYNIYSFFLLIAIGGIPSAISKQLSEYNAMNEYAVGQRLFKRGLLLTSAFGIIGAIILWFGAGLISTAFGGYDANLIPVLHALAIALVILPSMSLTRGFFQGYQQMAPSAISQFVEQVFRVIYMLGATYFIMRVAHGDWVNAVTQSTFAAFVGAAASFLLLGWYYFRKRPELNALAAQSENKLVIPVWQLFRDIIIQAIPFIVIDTATTVFNLLDQATFQPMMRLVYHLGTKQIDTLYAYFAFNANKLVMIIVSLASAIAVTVVPILSESLASHNMRNIRKQLEDSIILFLFIMIPGALGMAAVAQPLNTLFYSYDQIGTLILQISAFTAIALGFFTVISALMQGLSRNRDIIRYYLIGLLVKIVIQLPCIYFLSTAGPLVATAIGMMVASLMAMYDLEVNFGIRYVKLLPKINRILVYSILTYVTARLVVYGLNFVLNEHSKTQSFLIVALAVIAGGAVYVYLALRSRMADLMIGTKAAGLRRKLRIK
>CP035113.1|QAR37387.1|1100352_1101093_+|16S-rRNA-pseudouridine(516)-synthase
MRVDKFLHAMRIGTRTQVRRLIKDGHITANGEPVISGKQQINPGSDTVFLDDVQVRYQQYFYYVMNKPVGVITATTDSAAKTVMDLFNTTDFRDDLFPVGRLDKDTEGILVITNDGTLSHDLLSPNHHVTKVYEAEVTGEITAAQLANFNDGITLKDGTELQPAQAEIVQFHEIENFTTIRIMIHEGKYHQVKRMVGTLGERVVGLRRIKFGSLTLPVGLLAGNYRALTDDELTALKADANQPVGE
>CP035113.1|QAR37388.1|1101229_1102066_-|NAD(P)H-hydrate-dehydratase
MQPITTEIVSRTIIKRPADSHKGNYGRIMLIGGNQNFGGAIIMAATAATYSGAGLVTVATDPSNFTSLHARLPEAMVIDYHQTDTLLNLLAGMDVIVIGPGLGTDTVADQLLTAVLAATHVPQRLVIDGSALTLLAQQARPLPATDIVVTPHQMEWQRLSGIAIKDQTPTANHDAQQRLGVTAVVKAHRTTVYTDERVWFNPGGTPAMATGGMGDTLAGMIGGFVSQFHNFTDAVLSAVYLHSAIADDLAATRYVVLPHQISTRIPTYMHRFSQIERP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP035113_1	1.1\|347796\|18\|CP035113\|CRT	347796-347813	18	CP035113.1	2856471-2856488	2	0.889
CP035113_1	1.12\|348204\|18\|CP035113\|CRT	348204-348221	18	CP035113.1	1236855-1236872	2	0.889

1. spacer 1.1|347796|18|CP035113|CRT matches to position: 2856471-2856488, mismatch: 2, identity: 0.889

gccgctaagaaacataag	CRISPR spacer
gccgctaaggaacatcag	Protospacer
*********.***** **

2. spacer 1.12|348204|18|CP035113|CRT matches to position: 1236855-1236872, mismatch: 2, identity: 0.889

tcttccaagaagcatggt	CRISPR spacer
tcttccaagaacaatggt	Protospacer
***********  *****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP035113_2	2.28\|1086622\|22\|CP035113\|CRT	1086622-1086643	22	NZ_CP023562	Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence	21244-21265	1	0.955
CP035113_2	2.28\|1086622\|22\|CP035113\|CRT	1086622-1086643	22	NZ_CP047808	Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence	15865-15886	1	0.955
CP035113_2	2.28\|1086622\|22\|CP035113\|CRT	1086622-1086643	22	NZ_LT009691	Staphylococcus aureus strain NZAK3 plasmid 2	9802-9823	1	0.955
CP035113_2	2.28\|1086622\|22\|CP035113\|CRT	1086622-1086643	22	NZ_LT009691	Staphylococcus aureus strain NZAK3 plasmid 2	9946-9967	1	0.955
CP035113_2	2.11\|1085140\|40\|CP035113\|CRT	1085140-1085179	40	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	1753-1792	2	0.95
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	152041-152068	2	0.929
CP035113_2	2.28\|1086622\|22\|CP035113\|CRT	1086622-1086643	22	NZ_CP023562	Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence	21082-21103	2	0.909
CP035113_2	2.28\|1086622\|22\|CP035113\|CRT	1086622-1086643	22	NZ_CP047808	Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence	15469-15490	2	0.909
CP035113_2	2.28\|1086622\|22\|CP035113\|CRT	1086622-1086643	22	NZ_CP047808	Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence	15577-15598	2	0.909
CP035113_2	2.28\|1086622\|22\|CP035113\|CRT	1086622-1086643	22	NZ_CP047808	Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence	15703-15724	2	0.909
CP035113_2	2.28\|1086622\|22\|CP035113\|CRT	1086622-1086643	22	NZ_LT009691	Staphylococcus aureus strain NZAK3 plasmid 2	9640-9661	2	0.909
CP035113_2	2.28\|1086622\|22\|CP035113\|CRT	1086622-1086643	22	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	2077-2098	2	0.909
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	NZ_CP035292	Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence	19970-19997	2	0.929
CP035113_2	2.10\|1085080\|34\|CP035113\|CRT	1085080-1085113	34	NZ_CP047808	Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence	15595-15628	3	0.912
CP035113_2	2.10\|1085080\|34\|CP035113\|CRT	1085080-1085113	34	NZ_CP047808	Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence	15721-15754	3	0.912
CP035113_2	2.11\|1085140\|40\|CP035113\|CRT	1085140-1085179	40	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	1507-1546	3	0.925
CP035113_2	2.11\|1085140\|40\|CP035113\|CRT	1085140-1085179	40	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	3379-3418	3	0.925
CP035113_2	2.11\|1085140\|40\|CP035113\|CRT	1085140-1085179	40	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	3691-3730	3	0.925
CP035113_2	2.11\|1085140\|40\|CP035113\|CRT	1085140-1085179	40	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	151897-151936	3	0.925
CP035113_2	2.11\|1085140\|40\|CP035113\|CRT	1085140-1085179	40	CP052430	Klebsiella pneumoniae strain C16KP0129 plasmid pC16KP0129-3, complete sequence	1075-1114	3	0.925
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	154096-154123	3	0.893
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	154132-154159	3	0.893
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	1183-1210	3	0.893
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	1561-1588	3	0.893
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	2131-2158	3	0.893
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	1255-1282	3	0.893
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	1489-1516	3	0.893
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	3097-3124	3	0.893
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	3361-3388	3	0.893
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	152023-152050	3	0.893
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	157426-157453	4	0.857
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	151879-151906	4	0.857
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	153154-153181	4	0.857
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	153208-153235	4	0.857
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	154738-154765	4	0.857
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	154936-154963	4	0.857
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	155134-155161	4	0.857
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	155368-155395	4	0.857
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	155488-155515	4	0.857
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	156268-156295	4	0.857
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	156604-156631	4	0.857
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	1615-1642	4	0.857
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	1735-1762	4	0.857
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	3547-3574	4	0.857
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	154468-154495	5	0.821
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	153826-153853	5	0.821
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	156100-156127	5	0.821
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	156574-156601	5	0.821
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	28-55	5	0.821
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	1543-1570	5	0.821
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	1849-1876	5	0.821
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	2425-2452	5	0.821
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	2689-2716	5	0.821
CP035113_2	2.12\|1085206\|28\|CP035113\|CRT	1085206-1085233	28	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	2767-2794	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	NZ_CP035292	Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence	16556-16583	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	NZ_CP035292	Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence	17234-17261	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	NZ_CP035292	Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence	18038-18065	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	NZ_CP035292	Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence	18980-19007	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	NZ_CP035292	Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence	19520-19547	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	151549-151576	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	151585-151612	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	154060-154087	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	156808-156835	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	156976-157003	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	151861-151888	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	151987-152014	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	153190-153217	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	154720-154747	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	154918-154945	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	155116-155143	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	155350-155377	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	155866-155893	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	155920-155947	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	2221-2248	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	1831-1858	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	2593-2620	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	2875-2902	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	NZ_CP023562	Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence	21142-21169	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	NZ_CP023562	Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence	21340-21367	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	NZ_CP047808	Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence	15943-15970	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	NZ_LT009691	Staphylococcus aureus strain NZAK3 plasmid 2	9700-9727	5	0.821
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	NZ_LT009691	Staphylococcus aureus strain NZAK3 plasmid 2	9844-9871	5	0.821
CP035113_2	2.10\|1085080\|34\|CP035113\|CRT	1085080-1085113	34	NZ_CP035292	Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence	18908-18941	6	0.824
CP035113_2	2.11\|1085140\|40\|CP035113\|CRT	1085140-1085179	40	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	156844-156883	6	0.85
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	153952-153979	6	0.786
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	154774-154801	6	0.786
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	155170-155197	6	0.786
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	155224-155251	6	0.786
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	155404-155431	6	0.786
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	157282-157309	6	0.786
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	157318-157345	6	0.786
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	157606-157633	6	0.786
CP035113_2	2.31\|1086820\|28\|CP035113\|CRT	1086820-1086847	28	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	1345-1372	6	0.786
CP035113_1	1.2\|347832\|30\|CP035113\|CRT	347832-347861	30	NZ_CP006988	Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence	31047-31076	7	0.767
CP035113_2	2.10\|1085080\|34\|CP035113\|CRT	1085080-1085113	34	NZ_CP035292	Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence	18398-18431	7	0.794
CP035113_2	2.10\|1085080\|34\|CP035113\|CRT	1085080-1085113	34	NZ_CP035292	Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence	19118-19151	7	0.794
CP035113_2	2.10\|1085080\|34\|CP035113\|CRT	1085080-1085113	34	NZ_CP023562	Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence	21442-21475	7	0.794
CP035113_2	2.11\|1085140\|40\|CP035113\|CRT	1085140-1085179	40	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	154504-154543	7	0.825
CP035113_2	2.26\|1086472\|46\|CP035113\|CRT	1086472-1086517	46	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	156010-156055	7	0.848
CP035113_1	1.2\|347832\|30\|CP035113\|CRT	347832-347861	30	NC_042345	Phage Salvo, complete genome	4721-4750	8	0.733
CP035113_2	2.8\|1084936\|46\|CP035113\|CRT	1084936-1084981	46	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	153064-153109	8	0.826
CP035113_2	2.10\|1085080\|34\|CP035113\|CRT	1085080-1085113	34	NZ_CP035292	Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence	18188-18221	8	0.765
CP035113_2	2.10\|1085080\|34\|CP035113\|CRT	1085080-1085113	34	NZ_CP035292	Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence	19670-19703	8	0.765
CP035113_2	2.11\|1085140\|40\|CP035113\|CRT	1085140-1085179	40	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	155746-155785	8	0.8
CP035113_2	2.26\|1086472\|46\|CP035113\|CRT	1086472-1086517	46	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	155710-155755	8	0.826
CP035113_2	2.8\|1084936\|46\|CP035113\|CRT	1084936-1084981	46	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	156358-156403	9	0.804
CP035113_2	2.8\|1084936\|46\|CP035113\|CRT	1084936-1084981	46	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	154258-154303	10	0.783
CP035113_2	2.8\|1084936\|46\|CP035113\|CRT	1084936-1084981	46	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	2767-2812	10	0.783
CP035113_2	2.26\|1086472\|46\|CP035113\|CRT	1086472-1086517	46	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	3223-3268	10	0.783
CP035113_2	2.16\|1085476\|76\|CP035113\|CRT	1085476-1085551	76	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	3013-3088	21	0.724
CP035113_2	2.18\|1085668\|76\|CP035113\|CRT	1085668-1085743	76	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	156292-156367	21	0.724
CP035113_2	2.18\|1085668\|76\|CP035113\|CRT	1085668-1085743	76	CP052500	Klebsiella pneumoniae strain B17KP0021 plasmid unnamed	3013-3088	24	0.684

1. spacer 2.28|1086622|22|CP035113|CRT matches to NZ_CP023562 (Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence) position: , mismatch: 1, identity: 0.955

cgattctgactcagacagtgat	CRISPR spacer
cgattcggactcagacagtgat	Protospacer
****** ***************

2. spacer 2.28|1086622|22|CP035113|CRT matches to NZ_CP047808 (Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.955

cgattctgactcagacagtgat	CRISPR spacer
cgattcggactcagacagtgat	Protospacer
****** ***************

3. spacer 2.28|1086622|22|CP035113|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 1, identity: 0.955

cgattctgactcagacagtgat	CRISPR spacer
cgattcggactcagacagtgat	Protospacer
****** ***************

4. spacer 2.28|1086622|22|CP035113|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 1, identity: 0.955

cgattctgactcagacagtgat	CRISPR spacer
cgattcggactcagacagtgat	Protospacer
****** ***************

5. spacer 2.11|1085140|40|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 2, identity: 0.95

cgacagtgattctgactcggacagcgattcggactccgac	CRISPR spacer
cgacagtgattcggactctgacagcgattcggactccgac	Protospacer
************ ***** *********************

6. spacer 2.12|1085206|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 2, identity: 0.929

ggactccgacagtgattcggatagcgac	CRISPR spacer
ggactctgacagcgattcggatagcgac	Protospacer
******.*****.***************

7. spacer 2.28|1086622|22|CP035113|CRT matches to NZ_CP023562 (Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence) position: , mismatch: 2, identity: 0.909

cgattctgactcagacagtgat	CRISPR spacer
tgattcagactcagacagtgat	Protospacer
.***** ***************

8. spacer 2.28|1086622|22|CP035113|CRT matches to NZ_CP047808 (Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.909

cgattctgactcagacagtgat	CRISPR spacer
tgattcagactcagacagtgat	Protospacer
.***** ***************

9. spacer 2.28|1086622|22|CP035113|CRT matches to NZ_CP047808 (Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.909

cgattctgactcagacagtgat	CRISPR spacer
tgattcagactcagacagtgat	Protospacer
.***** ***************

10. spacer 2.28|1086622|22|CP035113|CRT matches to NZ_CP047808 (Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.909

cgattctgactcagacagtgat	CRISPR spacer
tgattcagactcagacagtgat	Protospacer
.***** ***************

11. spacer 2.28|1086622|22|CP035113|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 2, identity: 0.909

cgattctgactcagacagtgat	CRISPR spacer
tgattcagactcagacagtgat	Protospacer
.***** ***************

12. spacer 2.28|1086622|22|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 2, identity: 0.909

cgattctgactcagacagtgat	CRISPR spacer
cgattctgactctgacagtgac	Protospacer
************ ********.

13. spacer 2.31|1086820|28|CP035113|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.929

agatagcgacagcgactcagattccgac	CRISPR spacer
agatagcgacagcgactctgattcagac	Protospacer
****************** ***** ***

14. spacer 2.10|1085080|34|CP035113|CRT matches to NZ_CP047808 (Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.912

cgactctgatagcgactcagattcagacagtgat	CRISPR spacer
agactcagatagcgactccgattcagacagtgat	Protospacer
 ***** *********** ***************

15. spacer 2.10|1085080|34|CP035113|CRT matches to NZ_CP047808 (Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.912

cgactctgatagcgactcagattcagacagtgat	CRISPR spacer
agactcagatagcgactccgattcagacagtgat	Protospacer
 ***** *********** ***************

16. spacer 2.11|1085140|40|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 3, identity: 0.925

cgacagtgattctgactcggacagcgattcggactccgac	CRISPR spacer
ggacagcgactctgactcggacagcgattcggactccgac	Protospacer
 *****.**.******************************

17. spacer 2.11|1085140|40|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 3, identity: 0.925

cgacagtgattctgactcggacagcgattcggactccgac	CRISPR spacer
ggacagtgattccgactctgacagcgattcggactccgac	Protospacer
 ***********.***** *********************

18. spacer 2.11|1085140|40|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 3, identity: 0.925

cgacagtgattctgactcggacagcgattcggactccgac	CRISPR spacer
ggacagtgattccgactctgacagcgattcggactccgac	Protospacer
 ***********.***** *********************

19. spacer 2.11|1085140|40|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 3, identity: 0.925

cgacagtgattctgactcggacagcgattcggactccgac	CRISPR spacer
tgacagtgactctgactcggacagtgattcggactccgac	Protospacer
.********.**************.***************

20. spacer 2.11|1085140|40|CP035113|CRT matches to CP052430 (Klebsiella pneumoniae strain C16KP0129 plasmid pC16KP0129-3, complete sequence) position: , mismatch: 3, identity: 0.925

cgacagtgattctgactcggacagcgattcggactccgac	CRISPR spacer
tgacagcgactctgactcggacagcgattcggactccgac	Protospacer
.*****.**.******************************

21. spacer 2.12|1085206|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 3, identity: 0.893

ggactccgacagtgattcggatagcgac	CRISPR spacer
cgactccgacagcgattcggatagtgac	Protospacer
 ***********.***********.***

22. spacer 2.12|1085206|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 3, identity: 0.893

ggactccgacagtgattcggatagcgac	CRISPR spacer
cgactccgacagcgattcggatagtgac	Protospacer
 ***********.***********.***

23. spacer 2.12|1085206|28|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 3, identity: 0.893

ggactccgacagtgattcggatagcgac	CRISPR spacer
tgattccgacagtgattcggacagcgac	Protospacer
 **.*****************.******

24. spacer 2.12|1085206|28|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 3, identity: 0.893

ggactccgacagtgattcggatagcgac	CRISPR spacer
cgactccgacagtgattcggattccgac	Protospacer
 *********************  ****

25. spacer 2.12|1085206|28|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 3, identity: 0.893

ggactccgacagtgattcggatagcgac	CRISPR spacer
cgactccgacagtgactcggacagcgac	Protospacer
 **************.*****.******

26. spacer 2.12|1085206|28|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 3, identity: 0.893

ggactccgacagtgattcggatagcgac	CRISPR spacer
ggactccgacagtgattcggattcggac	Protospacer
**********************   ***

27. spacer 2.12|1085206|28|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 3, identity: 0.893

ggactccgacagtgattcggatagcgac	CRISPR spacer
ggactccgacagtgattcggattcggac	Protospacer
**********************   ***

28. spacer 2.12|1085206|28|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 3, identity: 0.893

ggactccgacagtgattcggatagcgac	CRISPR spacer
ggactccgacagtgattcggattcggac	Protospacer
**********************   ***

29. spacer 2.12|1085206|28|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 3, identity: 0.893

ggactccgacagtgattcggatagcgac	CRISPR spacer
ggactccgacagtgattcggattcggac	Protospacer
**********************   ***

30. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 3, identity: 0.893

agatagcgacagcgactcagattccgac	CRISPR spacer
ggatagcgacagcgactcggattcggac	Protospacer
.*****************.***** ***

31. spacer 2.12|1085206|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 4, identity: 0.857

ggactccgacagtgattcggatagcgac	CRISPR spacer
ggactccgacagtgattcggactcggac	Protospacer
*********************.   ***

32. spacer 2.12|1085206|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 4, identity: 0.857

ggactccgacagtgattcggatagcgac	CRISPR spacer
ggactccgacagtgattccgattcggac	Protospacer
****************** ***   ***

33. spacer 2.12|1085206|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 4, identity: 0.857

ggactccgacagtgattcggatagcgac	CRISPR spacer
ggactccgacagtgactcggattctgac	Protospacer
***************.******  .***

34. spacer 2.12|1085206|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 4, identity: 0.857

ggactccgacagtgattcggatagcgac	CRISPR spacer
ggactccgacagcgattcggattcggac	Protospacer
************.*********   ***

35. spacer 2.12|1085206|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 4, identity: 0.857

ggactccgacagtgattcggatagcgac	CRISPR spacer
ggactccgacagtgattccgattcggac	Protospacer
****************** ***   ***

36. spacer 2.12|1085206|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 4, identity: 0.857

ggactccgacagtgattcggatagcgac	CRISPR spacer
ggactccgacagtgattccgattcggac	Protospacer
****************** ***   ***

37. spacer 2.12|1085206|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 4, identity: 0.857

ggactccgacagtgattcggatagcgac	CRISPR spacer
ggactccgacagtgattccgattcggac	Protospacer
****************** ***   ***

38. spacer 2.12|1085206|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 4, identity: 0.857

ggactccgacagtgattcggatagcgac	CRISPR spacer
ggactccgacagtgattccgattcggac	Protospacer
****************** ***   ***

39. spacer 2.12|1085206|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 4, identity: 0.857

ggactccgacagtgattcggatagcgac	CRISPR spacer
ggactccgacagtgattccgattctgac	Protospacer
****************** ***  .***

40. spacer 2.12|1085206|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 4, identity: 0.857

ggactccgacagtgattcggatagcgac	CRISPR spacer
ggactccgacagtgattccgattctgac	Protospacer
****************** ***  .***

41. spacer 2.12|1085206|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 4, identity: 0.857

ggactccgacagtgattcggatagcgac	CRISPR spacer
ggactccgacagtgattccgattcagac	Protospacer
****************** ***   ***

42. spacer 2.12|1085206|28|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 4, identity: 0.857

ggactccgacagtgattcggatagcgac	CRISPR spacer
ggattccgacagtgattcggattctgac	Protospacer
***.******************  .***

43. spacer 2.12|1085206|28|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 4, identity: 0.857

ggactccgacagtgattcggatagcgac	CRISPR spacer
ggactccgacagcgattcggatgctgac	Protospacer
************.*********. .***

44. spacer 2.12|1085206|28|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 4, identity: 0.857

ggactccgacagtgattcggatagcgac	CRISPR spacer
ggattccgacagtgattcggattctgac	Protospacer
***.******************  .***

45. spacer 2.12|1085206|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.821

ggactccgacagtgattcggatagcgac	CRISPR spacer
cgactccgacagtgattcggactctgac	Protospacer
 ********************.  .***

46. spacer 2.12|1085206|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.821

ggactccgacagtgattcggatagcgac	CRISPR spacer
cgactccgacagcgattcggattctgac	Protospacer
 ***********.*********  .***

47. spacer 2.12|1085206|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.821

ggactccgacagtgattcggatagcgac	CRISPR spacer
cgactccgacagcgattcggattctgac	Protospacer
 ***********.*********  .***

48. spacer 2.12|1085206|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.821

ggactccgacagtgattcggatagcgac	CRISPR spacer
cgactccgacagcgattcggattctgac	Protospacer
 ***********.*********  .***

49. spacer 2.12|1085206|28|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 5, identity: 0.821

ggactccgacagtgattcggatagcgac	CRISPR spacer
tgactccgacagcgattcggattctgac	Protospacer
 ***********.*********  .***

50. spacer 2.12|1085206|28|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 5, identity: 0.821

ggactccgacagtgattcggatagcgac	CRISPR spacer
ggattccgacagtgattcggactcggac	Protospacer
***.*****************.   ***

51. spacer 2.12|1085206|28|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 5, identity: 0.821

ggactccgacagtgattcggatagcgac	CRISPR spacer
cgactccgacagcgattcggattctgac	Protospacer
 ***********.*********  .***

52. spacer 2.12|1085206|28|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 5, identity: 0.821

ggactccgacagtgattcggatagcgac	CRISPR spacer
tgactccgacagcgattcggattctgac	Protospacer
 ***********.*********  .***

53. spacer 2.12|1085206|28|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 5, identity: 0.821

ggactccgacagtgattcggatagcgac	CRISPR spacer
tgactccgacagcgattcggattctgac	Protospacer
 ***********.*********  .***

54. spacer 2.12|1085206|28|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 5, identity: 0.821

ggactccgacagtgattcggatagcgac	CRISPR spacer
cgactccgacagcgattcggattctgac	Protospacer
 ***********.*********  .***

55. spacer 2.31|1086820|28|CP035113|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
agatagcgacagcgattcagacagcgat	Protospacer
***************.*****.  ***.

56. spacer 2.31|1086820|28|CP035113|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
agatagcgacagcgattcagacagcgat	Protospacer
***************.*****.  ***.

57. spacer 2.31|1086820|28|CP035113|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
agatagcgacagcgattcagacagcgat	Protospacer
***************.*****.  ***.

58. spacer 2.31|1086820|28|CP035113|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
agatagcgacagcgattcagacagcgat	Protospacer
***************.*****.  ***.

59. spacer 2.31|1086820|28|CP035113|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
agatagcgacagcgattcagacagcgat	Protospacer
***************.*****.  ***.

60. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
cgactccgacagcgactcggattccgac	Protospacer
 **.  ************.*********

61. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
cgactccgacagcgactcggattccgac	Protospacer
 **.  ************.*********

62. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
cgactccgacagcgactcggattccgac	Protospacer
 **.  ************.*********

63. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
ggactccgacagcgactcggattccgac	Protospacer
.**.  ************.*********

64. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
ggactccgacagcgactcggattccgac	Protospacer
.**.  ************.*********

65. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
cgattcggacagcgactcggattccgac	Protospacer
 ***   ***********.*********

66. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
cgattcggacagcgactcggattccgac	Protospacer
 ***   ***********.*********

67. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
ggattcggacagcgactcggattccgac	Protospacer
.***   ***********.*********

68. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
cgattcggacagcgactcggattccgac	Protospacer
 ***   ***********.*********

69. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
cgattcggacagcgactcggattccgac	Protospacer
 ***   ***********.*********

70. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
cgattcggacagcgactcggattccgac	Protospacer
 ***   ***********.*********

71. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
cgattcggacagcgactcggattccgac	Protospacer
 ***   ***********.*********

72. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
cgattcggacagcgactcggattccgac	Protospacer
 ***   ***********.*********

73. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
ggattcggacagcgactcggattccgac	Protospacer
.***   ***********.*********

74. spacer 2.31|1086820|28|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
cgactccgacagcgactcagactccgac	Protospacer
 **.  ***************.******

75. spacer 2.31|1086820|28|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
ggattctgacagcgactccgattccgac	Protospacer
.***  .*********** *********

76. spacer 2.31|1086820|28|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
ggattctgacagcgactcagactccgac	Protospacer
.***  .**************.******

77. spacer 2.31|1086820|28|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
ggatgctgacagcgactcggattccgac	Protospacer
.***. .***********.*********

78. spacer 2.31|1086820|28|CP035113|CRT matches to NZ_CP023562 (Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
agactcagacagcgactcagattcagac	Protospacer
***.   ***************** ***

79. spacer 2.31|1086820|28|CP035113|CRT matches to NZ_CP023562 (Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
agactcagacagcgactcagattcagac	Protospacer
***.   ***************** ***

80. spacer 2.31|1086820|28|CP035113|CRT matches to NZ_CP047808 (Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
agactcagacagcgactcagattcagac	Protospacer
***.   ***************** ***

81. spacer 2.31|1086820|28|CP035113|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
agactcagacagcgactcagattcagac	Protospacer
***.   ***************** ***

82. spacer 2.31|1086820|28|CP035113|CRT matches to NZ_LT009691 (Staphylococcus aureus strain NZAK3 plasmid 2) position: , mismatch: 5, identity: 0.821

agatagcgacagcgactcagattccgac	CRISPR spacer
agactcagacagcgactcagattcagac	Protospacer
***.   ***************** ***

83. spacer 2.10|1085080|34|CP035113|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

cgactctgatagcgactcagattcagacagtgat	CRISPR spacer
agacagcgatagcgactctgattcagacagcgat	Protospacer
 ***  .*********** ***********.***

84. spacer 2.11|1085140|40|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 6, identity: 0.85

cgacagtgattctgactcggacagcgattcggactccgac	CRISPR spacer
tgactccgattcggactctgacagcgattcggactccgac	Protospacer
.***  .***** ***** *********************

85. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 6, identity: 0.786

agatagcgacagcgactcagattccgac	CRISPR spacer
ggactctgacagcgactcggattccgac	Protospacer
.**.  .***********.*********

86. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 6, identity: 0.786

agatagcgacagcgactcagattccgac	CRISPR spacer
cgactctgacagcgactcggattccgac	Protospacer
 **.  .***********.*********

87. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 6, identity: 0.786

agatagcgacagcgactcagattccgac	CRISPR spacer
cgactctgacagcgactcggattccgac	Protospacer
 **.  .***********.*********

88. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 6, identity: 0.786

agatagcgacagcgactcagattccgac	CRISPR spacer
cgactctgacagcgactcggattccgac	Protospacer
 **.  .***********.*********

89. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 6, identity: 0.786

agatagcgacagcgactcagattccgac	CRISPR spacer
cgactctgacagcgactcggattccgac	Protospacer
 **.  .***********.*********

90. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 6, identity: 0.786

agatagcgacagcgactcagattccgac	CRISPR spacer
ggactcggacagcgactccgattccgac	Protospacer
.**.   *********** *********

91. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 6, identity: 0.786

agatagcgacagcgactcagattccgac	CRISPR spacer
ggactctgacagcgactccgattccgac	Protospacer
.**.  .*********** *********

92. spacer 2.31|1086820|28|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 6, identity: 0.786

agatagcgacagcgactcagattccgac	CRISPR spacer
cgactctgacagcgactccgattccgac	Protospacer
 **.  .*********** *********

93. spacer 2.31|1086820|28|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 6, identity: 0.786

agatagcgacagcgactcagattccgac	CRISPR spacer
tgactctgacagcgactccgattccgac	Protospacer
 **.  .*********** *********

94. spacer 1.2|347832|30|CP035113|CRT matches to NZ_CP006988 (Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence) position: , mismatch: 7, identity: 0.767

cacaagaagaaagcggccaagaaacataag	CRISPR spacer
cacaagaataaagccgccaagaagctccgg	Protospacer
******** ***** ********.* . .*

95. spacer 2.10|1085080|34|CP035113|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.794

cgactctgatagcgactcagattcagacagtgat	CRISPR spacer
agatagcgatagcgactctgattcagacagcgat	Protospacer
 **.  .*********** ***********.***

96. spacer 2.10|1085080|34|CP035113|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.794

cgactctgatagcgactcagattcagacagtgat	CRISPR spacer
agatagcgatagcgactctgattcagacagcgat	Protospacer
 **.  .*********** ***********.***

97. spacer 2.10|1085080|34|CP035113|CRT matches to NZ_CP023562 (Staphylococcus aureus strain TF3198 plasmid pTF3198, complete sequence) position: , mismatch: 7, identity: 0.794

cgactctgatagcgactcagattcagacagtgat	CRISPR spacer
tacatcagatagcgactcagattcagacagcgac	Protospacer
..  ** ***********************.**.

98. spacer 2.11|1085140|40|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 7, identity: 0.825

cgacagtgattctgactcggacagcgattcggactccgac	CRISPR spacer
tgacagtgattccgactctgacagcgattcggatagtgac	Protospacer
.***********.***** **************.  .***

99. spacer 2.26|1086472|46|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 7, identity: 0.848

tgatagtgacagtgactccgactcggacagcgattcagactcagac	CRISPR spacer
ggactccgacagtgactccgattcggacagcgattccgactcagac	Protospacer
 **.  .**************.************** *********

100. spacer 1.2|347832|30|CP035113|CRT matches to NC_042345 (Phage Salvo, complete genome) position: , mismatch: 8, identity: 0.733

cacaagaagaaagcggccaagaaacataag	CRISPR spacer
ccggggaagtaagcggacaagaaacatact	Protospacer
*  ..**** ****** ***********

101. spacer 2.8|1084936|46|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 8, identity: 0.826

agatagcgacagtgactccgactcggacagtgattcggatagcgac	CRISPR spacer
ggactccgacagtgactccgattcggacagtgattcggattcggac	Protospacer
.**.  ***************.******************   ***

102. spacer 2.10|1085080|34|CP035113|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

cgactctgatagcgactcagattcagacagtgat	CRISPR spacer
agatagcgatagcgactcagactcagacagcgac	Protospacer
 **.  .**************.********.**.

103. spacer 2.10|1085080|34|CP035113|CRT matches to NZ_CP035292 (Staphylococcus haemolyticus strain ATCC 29970 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

cgactctgatagcgactcagattcagacagtgat	CRISPR spacer
agatagcgatagcgactcagactcagacagcgac	Protospacer
 **.  .**************.********.**.

104. spacer 2.11|1085140|40|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 8, identity: 0.8

cgacagtgattctgactcggacagcgattcggactccgac	CRISPR spacer
tgacgccgacagtgactctgacagcgattcggactccgac	Protospacer
.***. .**.  ****** *********************

105. spacer 2.26|1086472|46|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 8, identity: 0.826

tgatagtgacagtgactccgactcggacagcgattcagactcagac	CRISPR spacer
ggactccgacagtgactccgactccgacagcgattcagactcggat	Protospacer
 **.  .***************** *****************.**.

106. spacer 2.8|1084936|46|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 9, identity: 0.804

agatagcgacagtgactccgactcggacagtgattcggatagcgac	CRISPR spacer
ggactccgacagtgactccgattcggacagtgactcggattcggac	Protospacer
.**.  ***************.***********.******   ***

107. spacer 2.8|1084936|46|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 10, identity: 0.783

agatagcgacagtgactccgactcggacagtgattcggatagcgac	CRISPR spacer
cgactccgacagtgactccgactctgacagcgattcggactctgac	Protospacer
 **.  ****************** *****.********.  .***

108. spacer 2.8|1084936|46|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 10, identity: 0.783

agatagcgacagtgactccgactcggacagtgattcggatagcgac	CRISPR spacer
cgactctgacagtgactccgactccgacagcgattcggattctgac	Protospacer
 **.  .***************** *****.*********  .***

109. spacer 2.26|1086472|46|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 10, identity: 0.783

tgatagtgacagtgactccgactcggacagcgattcagactcagac	CRISPR spacer
cgactccgacagtgactccgattcggacagcgattccgacagcgac	Protospacer
.**.  .**************.************** ***   ***

110. spacer 2.16|1085476|76|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 21, identity: 0.724

ggacagcgacagtgactcagattcggacagtgattcggactcggacagcgattcagactc	CRISPR spacer
cgacagcgacagtgactcggattcggacagtgattcggactcggacagcgattcggatgc	Protospacer
 *****************.***********************************.**. *

111. spacer 2.18|1085668|76|CP035113|CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 21, identity: 0.724

ggacagcgacagtgactccgattcggacagtgattcggactcggacagcgattccgactc	CRISPR spacer
ggattcggacagtgactcggattcggacagtgattcggactcggacagcgattccgactc	Protospacer
***.   *********** *****************************************

112. spacer 2.18|1085668|76|CP035113|CRT matches to CP052500 (Klebsiella pneumoniae strain B17KP0021 plasmid unnamed) position: , mismatch: 24, identity: 0.684

ggacagcgacagtgactccgattcggacagtgattcggactcggacagcgatt------c	CRISPR spacer
cgacagcgacagtgactcggattcggacagtgattcggactcggacagcgattcggatgc	Protospacer
 ***************** **********************************      *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

515513 : 606468

112

Lactobacillus_phage(27.27%)

protease,head,capsid,portal,tail,holin,tRNA,integrase,terminase

attL 512389:512406|attR 569984:570001

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
512389:512406	attL	NA	NA	NA	NA
QAR36863.1\|515513_516206_+\|protease	matrixin family metalloprotease	NA	NA	NA	NA
QAR36864.1\|516395_517727_-	aminopeptidase	R4TV59	Phaeocystis_globosa_virus	4.1e-68	33.3
QAR36865.1\|517802_518486_-	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA
QAR36866.1\|518494_518791_-	N-acetyltransferase	NA	NA	NA	NA
QAR36867.1\|518929_519466_+	dUTP diphosphatase	J9PV85	Bacillus_phage	6.4e-36	46.4
QAR36868.1\|520243_520450_-	hypothetical protein	NA	NA	NA	NA
QAR36869.1\|520591_521971_+	DNA repair protein RadA	NA	NA	NA	NA
QAR36870.1\|521986_523162_+	PIN/TRAM domain-containing protein	NA	NA	NA	NA
QAR36871.1\|523487_524978_+\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
QAR36872.1\|525255_526668_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.1e-45	30.2
QAR36873.1\|526669_527080_+	Mini-ribonuclease 3	NA	NA	NA	NA
QAR36874.1\|527069_527837_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
QAR36875.1\|527838_528387_+	NYN domain-containing protein	NA	NA	NA	NA
QAR36876.1\|528893_529496_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
QAR36877.1\|529557_529707_+	50S ribosomal protein L33	NA	NA	NA	NA
QAR36878.1\|529718_529904_+	preprotein translocase subunit SecE	NA	NA	NA	NA
QAR36879.1\|530008_530557_+	transcription termination/antitermination protein NusG	NA	NA	NA	NA
QAR36880.1\|530584_531472_+	alpha/beta hydrolase	NA	NA	NA	NA
QAR36881.1\|531573_531999_+	50S ribosomal protein L11	NA	NA	NA	NA
QAR36882.1\|532099_532789_+	50S ribosomal protein L1	NA	NA	NA	NA
QAR36883.1\|532987_533491_+	50S ribosomal protein L10	NA	NA	NA	NA
QAR36884.1\|533552_533921_+	50S ribosomal protein L7/L12	NA	NA	NA	NA
QAR36885.1\|534072_535275_-\|integrase	integrase	A0A126GGK4	Streptococcus_phage	1.4e-35	29.0
QAR36886.1\|535343_535550_-	hypothetical protein	NA	NA	NA	NA
QAR36887.1\|535627_536350_-	hypothetical protein	A0A0R6PER3	Moraxella_phage	8.4e-07	25.1
QAR36888.1\|536351_537473_-	DUF262 domain-containing protein	A0A0R6PJX3	Moraxella_phage	5.1e-51	37.6
QAR36889.1\|537430_538465_-	DNA cytosine methyltransferase	A0A0R6PG08	Moraxella_phage	7.4e-89	50.4
QAR36890.1\|538882_539518_-	DUF2304 domain-containing protein	NA	NA	NA	NA
QAR36891.1\|539651_540074_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
QAR36892.1\|540088_540607_-	XRE family transcriptional regulator	S6C481	Thermus_phage	3.5e-15	34.1
QAR36893.1\|540748_541003_+	XRE family transcriptional regulator	A0A2H4JFN1	uncultured_Caudovirales_phage	1.5e-06	41.3
QAR36894.1\|541361_541544_+	hypothetical protein	NA	NA	NA	NA
QAR36895.1\|541604_542159_+	hypothetical protein	O03909	Lactobacillus_phage	2.6e-93	95.1
QAR36896.1\|542164_542452_+	DNA-binding protein	NA	NA	NA	NA
QAR36897.1\|542707_542965_+	hypothetical protein	NA	NA	NA	NA
QAR36898.1\|542961_543093_+	hypothetical protein	NA	NA	NA	NA
QAR36899.1\|543085_543598_+	hypothetical protein	NA	NA	NA	NA
QAR36900.1\|543600_544248_+	erf family protein	D6PSU1	Lactobacillus_phage	8.7e-64	59.0
QAR36901.1\|544244_544640_+	single-stranded DNA-binding protein	D6PSU2	Lactobacillus_phage	7.2e-45	66.4
QAR36902.1\|544726_545635_+	DnaD domain protein	NA	NA	NA	NA
QAR36903.1\|545631_545919_+	hypothetical protein	NA	NA	NA	NA
QAR36904.1\|545915_546638_+	oxidoreductase	A0A141E1D3	Streptococcus_phage	5.5e-51	46.4
QAR36905.1\|546642_547161_+	hypothetical protein	O03915	Lactobacillus_phage	1.9e-37	52.6
QAR36906.1\|547157_547538_+	hypothetical protein	NA	NA	NA	NA
QAR36907.1\|547886_548078_+	hypothetical protein	NA	NA	NA	NA
QAR36908.1\|548123_548507_+	hypothetical protein	A0A2K9V535	Lactobacillus_phage	5.4e-45	63.0
QAR36909.1\|548888_549356_+	hypothetical protein	B4XYT9	Lactobacillus_phage	1.4e-15	40.0
QAR36910.1\|549591_549759_+	BC1881 family protein	NA	NA	NA	NA
QAR36911.1\|549755_549965_-	KTSC domain-containing protein	NA	NA	NA	NA
QAR36912.1\|550213_550408_+	hypothetical protein	NA	NA	NA	NA
QAR36913.1\|550461_550971_+\|terminase	terminase small subunit	O03926	Lactobacillus_phage	6.6e-59	77.2
QAR36914.1\|551175_552474_+\|terminase	PBSX family phage terminase large subunit	B7T0C6	Staphylococcus_virus	2.2e-114	50.1
QAR36915.1\|552463_554140_+\|portal	phage portal protein	D2IZF6	Enterococcus_phage	4.4e-67	33.4
QAR36916.1\|554153_555098_+\|head	phage head morphogenesis protein	A0A0P0IR98	Acinetobacter_phage	1.2e-05	23.9
QAR36917.1\|555207_555855_+	DUF4355 domain-containing protein	NA	NA	NA	NA
QAR36918.1\|555868_556951_+\|capsid	phage capsid protein	A0A0P0HSG2	Acinetobacter_phage	1.3e-40	33.2
QAR36919.1\|556965_557331_+\|head,tail	phage head-tail connector protein	H9A0V3	Staphylococcus_phage	8.8e-05	38.9
QAR36920.1\|557335_557659_+	hypothetical protein	NA	NA	NA	NA
QAR36921.1\|557648_558203_+\|tail	phage tail protein	NA	NA	NA	NA
QAR36922.1\|558204_558591_+	DUF3168 domain-containing protein	NA	NA	NA	NA
QAR36923.1\|558602_559196_+\|tail	phage tail protein	NA	NA	NA	NA
QAR36924.1\|559213_559726_+	hypothetical protein	NA	NA	NA	NA
QAR36925.1\|559794_560031_+	hypothetical protein	NA	NA	NA	NA
QAR36926.1\|560030_564107_+	tape measure protein	E9LUR1	Lactobacillus_phage	5.3e-82	46.0
QAR36927.1\|564116_565013_+\|tail	phage tail family protein	A8ATA8	Listeria_phage	7.0e-19	29.3
QAR36928.1\|565009_566191_+	hypothetical protein	A0A0M7RDS2	Lactobacillus_phage	2.8e-23	32.3
QAR36929.1\|566187_566454_+	hypothetical protein	NA	NA	NA	NA
QAR36930.1\|566443_566746_+	hypothetical protein	NA	NA	NA	NA
QAR36931.1\|566745_568341_+	DUF2479 domain-containing protein	O03968	Lactobacillus_phage	7.7e-69	47.6
QAR36932.1\|568340_569315_+	hypothetical protein	NA	NA	NA	NA
QAR36933.1\|569317_569578_+	hypothetical protein	NA	NA	NA	NA
QAR36934.1\|569570_569702_+	XkdX family protein	NA	NA	NA	NA
QAR39175.1\|569829_570183_+	hypothetical protein	D6PSR9	Lactobacillus_phage	6.1e-27	50.9
569984:570001	attR	NA	NA	NA	NA
QAR36935.1\|570175_570550_+	hypothetical protein	NA	NA	NA	NA
QAR36936.1\|570488_570773_+\|holin	phage holin	A0A1D6Z272	Staphylococcus_phage	2.4e-05	36.4
QAR36937.1\|570756_571911_+	LysM peptidoglycan-binding domain-containing protein	O03950	Lactobacillus_phage	1.2e-42	38.2
QAR36938.1\|572011_572548_+	DUF4065 domain-containing protein	A0A0R6PCI9	Moraxella_phage	2.2e-20	38.1
QAR36939.1\|572480_573335_+	hypothetical protein	Q938J2	Temperate_phage	2.6e-07	28.5
QAR36940.1\|573946_574924_-	hydroxyacid dehydrogenase	NA	NA	NA	NA
QAR36941.1\|574936_575605_-	cell surface protein	NA	NA	NA	NA
QAR36942.1\|575908_578512_+	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	NA	NA	NA	NA
QAR36943.1\|578686_579262_-	TIGR00730 family Rossman fold protein	A0A1G5S9X4	Enterococcus_phage	6.4e-26	41.7
QAR36944.1\|579343_580354_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	3.1e-108	60.5
QAR36945.1\|580381_582547_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	5.7e-269	63.5
QAR36946.1\|582685_582916_-	redoxin NrdH	X2KRY7	Enterococcus_phage	2.8e-09	40.0
QAR36947.1\|583138_583747_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
QAR36948.1\|583749_584256_+	nucleoside deaminase	NA	NA	NA	NA
QAR36949.1\|584781_586479_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	3.0e-55	37.0
QAR36950.1\|586500_586809_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
QAR36951.1\|586824_587424_+	recombination protein RecR	NA	NA	NA	NA
QAR36952.1\|587438_587690_+	DUF2508 family protein	NA	NA	NA	NA
QAR36953.1\|588088_588754_+	dTMP kinase	M1PSC7	Streptococcus_phage	6.4e-54	53.2
QAR36954.1\|588750_589080_+	hypothetical protein	NA	NA	NA	NA
QAR36955.1\|589096_590116_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	2.1e-32	33.5
QAR36956.1\|590140_590488_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	2.4e-12	33.3
QAR36957.1\|590586_591483_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	9.9e-82	55.7
QAR36958.1\|591486_592272_+	acyl-ACP thioesterase	NA	NA	NA	NA
QAR36959.1\|592410_593406_+	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	5.9e-51	38.2
QAR36960.1\|593539_594640_-	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA
QAR36961.1\|594661_595459_-	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA
QAR36962.1\|595483_596338_-	ABC transporter permease subunit	NA	NA	NA	NA
QAR39176.1\|596334_597123_-	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
QAR36963.1\|597127_597898_-	phosphonate ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.1e-12	32.4
QAR36964.1\|597935_598988_-	phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
QAR36965.1\|599267_599993_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
QAR36966.1\|599976_600555_+	ribosomal-protein-alanine N-acetyltransferase	NA	NA	NA	NA
QAR36967.1\|600547_601003_+	ribosomal-protein-alanine N-acetyltransferase	NA	NA	NA	NA
QAR36968.1\|601007_602054_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	3.5e-62	41.7
QAR36969.1\|602166_602370_+	hypothetical protein	NA	NA	NA	NA
QAR36970.1\|602830_604813_-	ABC transporter ATP-binding protein	A0A2K9L0W2	Tupanvirus	2.6e-50	28.8
QAR36971.1\|604981_605659_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
QAR36972.1\|605823_606468_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_2

1180004 : 1189849

Lactobacillus_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAR37450.1\|1180004_1181243_+	hypothetical protein	A0A2P0ZL72	Lactobacillus_phage	1.4e-216	97.7
QAR37451.1\|1181333_1182305_-	peptidase S41	A0A2P0ZL68	Lactobacillus_phage	9.4e-179	97.2
QAR37452.1\|1182490_1183438_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	2.7e-178	100.0
QAR37453.1\|1183781_1184396_+	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	3.1e-111	99.5
QAR37454.1\|1184398_1186837_+	flavocytochrome c	A0A2P0ZL82	Lactobacillus_phage	0.0e+00	99.5
QAR37455.1\|1186924_1187485_+	hypothetical protein	A0A2P0ZL75	Lactobacillus_phage	2.7e-101	100.0
QAR37456.1\|1187555_1187996_-	nucleoside 2-deoxyribosyltransferase	A0A2P0ZL88	Lactobacillus_phage	3.0e-76	98.6
QAR37457.1\|1188091_1188229_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
QAR37458.1\|1188853_1189849_+	glycosyltransferase	S5FKN0	Shigella_phage	7.7e-51	38.2

DBSCAN-SWA_3

1696083 : 1783069

Lactobacillus_phage(78.57%)

protease,lysis,capsid,holin,tail,portal,transposase,tRNA,integrase,terminase

attL 1721602:1721619|attR 1789831:1789848

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAR37934.1\|1696083_1697007_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
QAR37935.1\|1699052_1700351_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
QAR37936.1\|1700364_1700892_-	amino acid biosynthesis protein	NA	NA	NA	NA
QAR37937.1\|1700900_1702070_-	chorismate synthase	NA	NA	NA	NA
QAR37938.1\|1702062_1703517_-	MFS transporter	NA	NA	NA	NA
QAR37939.1\|1704165_1704519_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA
QAR37940.1\|1704541_1707118_-	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	9.6e-21	23.3
QAR37941.1\|1707132_1707438_-	hypothetical protein	NA	NA	NA	NA
QAR37942.1\|1707427_1707727_-	YlxR family protein	NA	NA	NA	NA
QAR37943.1\|1707771_1708989_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
QAR37944.1\|1709009_1709486_-	ribosome maturation factor RimP	NA	NA	NA	NA
QAR37945.1\|1709781_1714095_-	PolC-type DNA polymerase III	A0A1X9SH08	Bradyrhizobium_phage	1.0e-14	34.0
QAR37946.1\|1714588_1716298_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
QAR37947.1\|1716337_1717615_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
QAR37948.1\|1717652_1718438_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
QAR37949.1\|1718453_1719233_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	1.1e-23	43.1
QAR37950.1\|1719352_1719916_-	ribosome recycling factor	NA	NA	NA	NA
QAR37951.1\|1719917_1720640_-	UMP kinase	NA	NA	NA	NA
QAR37952.1\|1720839_1721718_-	elongation factor Ts	NA	NA	NA	NA
1721602:1721619	attL	NA	NA	NA	NA
QAR37953.1\|1721820_1722624_-	30S ribosomal protein S2	NA	NA	NA	NA
QAR37954.1\|1722848_1723571_+	HAD family hydrolase	NA	NA	NA	NA
QAR37955.1\|1723858_1724857_-	D-2-hydroxyacid dehydrogenase	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	2.3e-47	34.9
QAR37956.1\|1724941_1725247_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
QAR37957.1\|1725230_1725989_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
QAR37958.1\|1726100_1726736_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
QAR37959.1\|1726793_1727030_-	YneF family protein	NA	NA	NA	NA
QAR37960.1\|1727127_1727367_-	DUF896 domain-containing protein	NA	NA	NA	NA
QAR37961.1\|1727518_1728151_+	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	2.3e-16	56.2
QAR39196.1\|1728240_1728471_-	hypothetical protein	NA	NA	NA	NA
QAR37962.1\|1728774_1729404_+	hypothetical protein	NA	NA	NA	NA
QAR37963.1\|1729453_1730623_-	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
QAR37964.1\|1731213_1731606_+	hypothetical protein	NA	NA	NA	NA
QAR37965.1\|1732051_1732993_+	glycosyltransferase	V9QJB1	Oenococcus_phage	3.1e-78	48.7
QAR37966.1\|1734416_1735586_-	LytR family transcriptional regulator	NA	NA	NA	NA
QAR37967.1\|1735566_1736358_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.5e-30	36.8
QAR37968.1\|1738343_1739519_-\|transposase	IS256 family transposase	NA	NA	NA	NA
QAR37969.1\|1739956_1741168_-	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA
QAR37970.1\|1742411_1742789_-\|holin	holin	A0A2K9VCG4	Lactobacillus_phage	3.7e-14	63.8
QAR37971.1\|1742801_1743065_-\|holin	holin	E9LUR9	Lactobacillus_phage	2.0e-38	100.0
QAR37972.1\|1743064_1744123_-	LysM peptidoglycan-binding domain-containing protein	A0A2P0ZLG2	Lactobacillus_phage	4.2e-116	71.6
QAR37973.1\|1744122_1744407_-\|lysis	lysis protein	A0A2P0ZLE8	Lactobacillus_phage	2.0e-41	96.8
QAR37974.1\|1744406_1744616_-	hypothetical protein	A0A2P0ZLG4	Lactobacillus_phage	1.3e-08	58.0
QAR37975.1\|1744621_1745002_-	hypothetical protein	A0A2P0ZLF7	Lactobacillus_phage	2.7e-49	75.2
QAR37976.1\|1745018_1745453_-	hypothetical protein	A0A2P0ZLE9	Lactobacillus_phage	3.7e-58	80.6
QAR37977.1\|1745454_1745946_-	DUF1617 family protein	A0A2P0ZLE0	Lactobacillus_phage	3.9e-48	63.1
QAR37978.1\|1745972_1750949_-	hypothetical protein	A0A2P0ZLE1	Lactobacillus_phage	1.6e-298	51.7
QAR37979.1\|1750968_1751790_-\|tail	phage tail protein	A0A2P0ZLE2	Lactobacillus_phage	1.2e-150	96.3
QAR37980.1\|1751793_1756338_-\|tail	phage tail tape measure protein	A0A2P0ZLF1	Lactobacillus_phage	0.0e+00	90.4
QAR37981.1\|1756356_1756578_-\|tail	phage tail tape measure protein	A0A2P0ZLD9	Lactobacillus_phage	1.0e-32	100.0
QAR37982.1\|1756601_1756916_-	hypothetical protein	A0A2P0ZLF3	Lactobacillus_phage	2.4e-51	96.2
QAR37983.1\|1757008_1757620_-\|tail	phage tail protein	A0A2P0ZLF5	Lactobacillus_phage	4.3e-105	96.1
QAR37984.1\|1757634_1758057_-	hypothetical protein	A0A2P0ZLE4	Lactobacillus_phage	7.4e-72	98.6
QAR37985.1\|1758053_1758461_-	hypothetical protein	A0A2P0ZLD7	Lactobacillus_phage	2.0e-66	94.1
QAR37986.1\|1758457_1758847_-	hypothetical protein	A0A2P0ZLD1	Lactobacillus_phage	5.8e-63	89.1
QAR39197.1\|1758827_1759085_-	hypothetical protein	A0A2P0ZLD5	Lactobacillus_phage	4.2e-38	95.3
QAR37987.1\|1759256_1760429_-\|capsid	phage major capsid protein	A0A2P0ZLD6	Lactobacillus_phage	1.0e-110	54.8
QAR37988.1\|1760451_1761174_-\|protease	Clp protease ClpP	A0A2P0ZLE3	Lactobacillus_phage	5.3e-94	74.2
QAR37989.1\|1761160_1762303_-\|portal	phage portal protein	A0A2P0ZLC9	Lactobacillus_phage	4.0e-213	97.6
QAR37990.1\|1762321_1764001_-\|terminase	terminase large subunit	A0A2P0ZLE5	Lactobacillus_phage	0.0e+00	97.7
QAR37991.1\|1763997_1764285_-	hypothetical protein	A0A2P0ZLC8	Lactobacillus_phage	2.2e-43	96.8
QAR37992.1\|1764393_1764636_-	hypothetical protein	A0A2P0ZLD2	Lactobacillus_phage	6.8e-38	95.0
QAR37993.1\|1764653_1764896_-	hypothetical protein	A0A2P0ZLD3	Lactobacillus_phage	1.5e-32	82.5
QAR37994.1\|1764895_1765234_-	HNH endonuclease	A0A2P0ZLC6	Lactobacillus_phage	6.6e-63	98.2
QAR37995.1\|1765217_1765418_-	hypothetical protein	A0A2P0ZLC2	Lactobacillus_phage	5.1e-15	86.4
QAR37996.1\|1765483_1766164_-\|terminase	terminase	Q20DE0	Lactobacillus_phage	3.0e-46	47.8
QAR37997.1\|1766316_1767018_-	hypothetical protein	NA	NA	NA	NA
QAR37998.1\|1767093_1767507_-	hypothetical protein	A0A2P0ZLC0	Lactobacillus_phage	8.9e-70	98.5
QAR37999.1\|1767518_1767830_-	hypothetical protein	A0A2P0ZLD0	Lactobacillus_phage	8.5e-49	93.2
QAR38000.1\|1768037_1768466_-	hypothetical protein	Q5ULU9	Lactobacillus_virus	3.1e-73	87.9
QAR38001.1\|1768607_1768766_-	hypothetical protein	A0A2P0ZLB5	Lactobacillus_phage	1.9e-17	90.4
QAR38002.1\|1768758_1769067_-	hypothetical protein	E9LUN7	Lactobacillus_phage	1.3e-46	90.2
QAR38003.1\|1769202_1769988_-	ATP-binding protein	E9LUN6	Lactobacillus_phage	1.6e-131	90.4
QAR38004.1\|1771513_1771975_-	single-stranded DNA-binding protein	A0A218MNB4	uncultured_virus	1.1e-39	70.9
QAR38005.1\|1771971_1772598_-	single-stranded DNA-binding protein	D7RWM8	Brochothrix_phage	2.3e-13	37.4
QAR38006.1\|1772597_1773458_-	DUF1351 domain-containing protein	A0A0P0IV40	Lactobacillus_phage	1.4e-32	35.6
QAR38007.1\|1773652_1773877_-	hypothetical protein	E9LUT8	Lactobacillus_phage	7.0e-29	87.7
QAR38008.1\|1773888_1774089_-	hypothetical protein	E9LUT7	Lactobacillus_phage	2.9e-26	87.9
QAR38009.1\|1774091_1774340_-	tagatose-bisphosphate aldolase	E9LUT6	Lactobacillus_phage	1.9e-35	84.1
QAR38010.1\|1774481_1774742_-	hypothetical protein	NA	NA	NA	NA
QAR38011.1\|1774799_1775177_+	hypothetical protein	NA	NA	NA	NA
QAR38012.1\|1775879_1776089_-	hypothetical protein	NA	NA	NA	NA
QAR39198.1\|1776100_1776817_-	phage regulatory protein	D2IYT0	Enterococcus_phage	2.2e-63	58.6
QAR38013.1\|1776873_1777125_+	hypothetical protein	NA	NA	NA	NA
QAR38014.1\|1777995_1778211_-	hypothetical protein	NA	NA	NA	NA
QAR38015.1\|1778467_1778794_+	XRE family transcriptional regulator	A0A1B0Y2R0	Lactobacillus_phage	6.9e-17	44.1
QAR39199.1\|1778824_1779214_+	ImmA/IrrE family metallo-endopeptidase	D6PSS8	Lactobacillus_phage	4.6e-36	54.3
QAR38016.1\|1779276_1780155_+	hypothetical protein	A0A2H4J549	uncultured_Caudovirales_phage	2.3e-06	34.8
QAR38017.1\|1780169_1780370_+	hypothetical protein	E9LUS6	Lactobacillus_phage	4.9e-26	100.0
QAR38018.1\|1780675_1780858_+	hypothetical protein	A0A2P0ZL93	Lactobacillus_phage	8.8e-14	66.7
QAR38019.1\|1781027_1781216_+	hypothetical protein	E9LUS5	Lactobacillus_phage	2.1e-26	100.0
QAR38020.1\|1781372_1781735_+	hypothetical protein	E9LUS2	Lactobacillus_phage	4.7e-59	95.0
QAR38021.1\|1781905_1783069_+\|integrase	site-specific integrase	B4XYR4	Lactobacillus_phage	5.4e-56	36.5
1789831:1789848	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2075189 : 2082522

Lactobacillus_phage(40.0%)

head,capsid,portal,tail,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAR38285.1\|2075189_2075459_-\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
QAR38286.1\|2075868_2077410_-\|capsid	phage major capsid protein	B8R651	Lactobacillus_phage	3.3e-45	25.8
QAR38287.1\|2077406_2078507_-\|portal	phage portal protein	A0A2H4J9Q5	uncultured_Caudovirales_phage	8.8e-48	34.0
QAR38288.1\|2078507_2078708_-	hypothetical protein	NA	NA	NA	NA
QAR38289.1\|2078661_2080365_-\|terminase	terminase large subunit	A0A2H4JBN3	uncultured_Caudovirales_phage	2.4e-121	40.3
QAR38290.1\|2080361_2080835_-\|terminase	phage terminase small subunit P27 family	NA	NA	NA	NA
QAR38291.1\|2081801_2082191_-	HNH endonuclease	A0A1J0MFT4	Staphylococcus_phage	3.0e-19	45.2
QAR38292.1\|2082183_2082522_-\|head,tail	head-tail adaptor protein	A0A2P0ZLF0	Lactobacillus_phage	1.2e-08	33.7

DBSCAN-SWA_5

2769540 : 2777792

Streptococcus_phage(16.67%)

bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAR38881.1\|2769540_2770653_-	glycerate kinase	W6LM47	Streptococcus_phage	4.3e-34	34.6
QAR38882.1\|2770788_2772123_+	NAD(P)/FAD-dependent oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	1.0e-26	26.4
QAR38883.1\|2772317_2772647_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
QAR38884.1\|2772833_2774132_-	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	3.8e-18	33.6
QAR38885.1\|2774448_2775738_+	adenylosuccinate synthase	L7Y4J5	Megavirus	2.7e-72	37.0
QAR38886.1\|2775780_2776758_+	GMP reductase	Q4ZCY7	Staphylococcus_virus	1.4e-137	71.2
QAR38887.1\|2776850_2777792_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	2.3e-17	30.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP035115

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

787 : 62543

Staphylococcus_phage(20.0%)

integrase,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAR39317.1\|787_1603_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.0e-14	28.5
QAR39318.1\|1692_2091_+	DUF1722 domain-containing protein	NA	NA	NA	NA
QAR39319.1\|2335_3445_-	hypothetical protein	NA	NA	NA	NA
QAR39320.1\|3446_4889_-	hypothetical protein	NA	NA	NA	NA
QAR39321.1\|5103_5643_+\|transposase	IS30 family transposase	NA	NA	NA	NA
QAR39375.1\|5672_5924_+	PspC domain-containing protein	NA	NA	NA	NA
QAR39322.1\|6105_6663_+	DUF1541 domain-containing protein	NA	NA	NA	NA
QAR39323.1\|6767_7766_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.9e-49	38.4
QAR39324.1\|7989_9159_+	serine/threonine protein phosphatase	NA	NA	NA	NA
QAR39325.1\|9649_9913_+	ribonuclease G	NA	NA	NA	NA
QAR39326.1\|9985_10384_-	hypothetical protein	NA	NA	NA	NA
QAR39327.1\|10376_10697_-	acetyl-CoA carboxylase	NA	NA	NA	NA
QAR39328.1\|10689_11991_-	Y-family DNA polymerase	M1Q231	Streptococcus_phage	1.1e-81	40.0
QAR39329.1\|12104_12416_+	hypothetical protein	NA	NA	NA	NA
QAR39330.1\|12637_12907_-	hypothetical protein	NA	NA	NA	NA
QAR39331.1\|12893_13796_-	chromosome partitioning protein ParA	F0PIG8	Enterococcus_phage	4.1e-27	32.1
QAR39332.1\|14655_16188_+	plasmid replication protein	NA	NA	NA	NA
QAR39376.1\|17346_17646_+	replication protein	NA	NA	NA	NA
QAR39333.1\|18750_19029_-	hypothetical protein	NA	NA	NA	NA
QAR39334.1\|19050_19260_-	hypothetical protein	NA	NA	NA	NA
QAR39335.1\|19530_21591_+	nickase	NA	NA	NA	NA
QAR39336.1\|21849_22005_+	hypothetical protein	NA	NA	NA	NA
QAR39337.1\|22435_27058_+	LPXTG cell wall anchor domain-containing protein	A0A1B0T6A2	Bacillus_phage	7.8e-13	26.6
QAR39338.1\|27503_28748_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	3.2e-46	31.9
QAR39339.1\|28950_29187_-	hypothetical protein	NA	NA	NA	NA
QAR39340.1\|29116_29407_+	hypothetical protein	NA	NA	NA	NA
QAR39341.1\|29513_29810_+	hypothetical protein	NA	NA	NA	NA
QAR39342.1\|29890_30016_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
QAR39343.1\|30042_30888_+\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	2.6e-23	29.7
QAR39344.1\|31028_31520_-	DUF1836 domain-containing protein	NA	NA	NA	NA
QAR39345.1\|31547_32396_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	6.2e-09	39.2
QAR39346.1\|32872_34048_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	7.0e-27	28.8
QAR39347.1\|34188_34791_-\|integrase	integrase	D2XR58	Bacillus_phage	2.2e-32	42.5
QAR39348.1\|36021_36123_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
QAR39349.1\|37374_38145_+	polysaccharide biosynthesis protein	NA	NA	NA	NA
QAR39350.1\|38156_38885_+	tyrosine-protein kinase family protein	NA	NA	NA	NA
QAR39351.1\|39704_40373_+	sugar transferase	NA	NA	NA	NA
QAR39352.1\|40423_41557_+	glycosyltransferase	A0A1V0SL50	Klosneuvirus	1.0e-06	28.8
QAR39353.1\|41635_42412_+	glycosyltransferase	NA	NA	NA	NA
QAR39354.1\|42431_43559_+	EpsG family protein	NA	NA	NA	NA
QAR39355.1\|43601_44318_+	glycosyl transferase	A0A1V0SBP5	Catovirus	1.5e-08	34.3
QAR39356.1\|44372_45596_+	hypothetical protein	NA	NA	NA	NA
QAR39357.1\|45595_46012_+	glycerol-3-phosphate cytidylyltransferase	A0A1V0SGE7	Hokovirus	7.7e-13	36.1
QAR39358.1\|46015_47056_+	asparagine synthase	NA	NA	NA	NA
QAR39359.1\|47138_48593_+	hypothetical protein	NA	NA	NA	NA
QAR39360.1\|49103_50173_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	6.3e-35	33.2
QAR39361.1\|50314_50737_+	Spx/MgsR family RNA polymerase-binding regulatory protein	NA	NA	NA	NA
QAR39362.1\|51266_52526_-	cytochrome P450	NA	NA	NA	NA
QAR39377.1\|52958_53012_+	hypothetical protein	NA	NA	NA	NA
QAR39363.1\|53217_54141_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.0e-49	41.2
QAR39364.1\|54450_55005_+	recombinase family protein	A0A1J1J8Z4	Escherichia_phage	1.5e-32	45.1
QAR39365.1\|56326_56416_+	hypothetical protein	NA	NA	NA	NA
QAR39366.1\|56974_57427_+	ribonucleotide reductase assembly protein NrdI	NA	NA	NA	NA
QAR39367.1\|57433_59602_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	6.2e-255	60.3
QAR39368.1\|59708_60635_+	ribonucleoside-diphosphate reductase	A0A2H4P8A9	Corynebacterium_phage	1.9e-35	31.4
QAR39369.1\|60649_61600_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	7.2e-99	54.6
QAR39370.1\|61727_62543_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.0e-14	28.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. CP035116

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

7878 : 63804

Lactobacillus_phage(25.0%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAR39382.1\|7878_7983_-\|holin	putative holin-like toxin	NA	NA	NA	NA
QAR39383.1\|8110_9079_+	FRG domain-containing protein	NA	NA	NA	NA
QAR39384.1\|10929_13647_+	glycoside hydrolase family 65 protein	NA	NA	NA	NA
QAR39385.1\|13665_14337_+	beta-phosphoglucomutase	A0A1D8KNV9	Synechococcus_phage	6.0e-07	22.7
QAR39386.1\|16836_17391_+	recombinase family protein	A0A1J1J8Z4	Escherichia_phage	3.4e-32	44.6
QAR39387.1\|18229_18922_+	hypothetical protein	NA	NA	NA	NA
QAR39388.1\|18938_19868_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.9e-25	29.0
QAR39389.1\|19894_20035_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
QAR39390.1\|20051_21443_+	MATE family efflux transporter	NA	NA	NA	NA
QAR39391.1\|21572_21872_-	hypothetical protein	NA	NA	NA	NA
QAR39392.1\|21873_22734_-	ParA family protein	F0PIG8	Enterococcus_phage	1.7e-43	40.2
QAR39393.1\|23110_23317_+	hypothetical protein	NA	NA	NA	NA
QAR39394.1\|23323_23530_-	hypothetical protein	NA	NA	NA	NA
QAR39395.1\|23681_24014_+	hypothetical protein	NA	NA	NA	NA
QAR39396.1\|24683_26351_-	alpha-glucosidase	NA	NA	NA	NA
QAR39491.1\|26312_26507_+	hypothetical protein	NA	NA	NA	NA
QAR39397.1\|26496_27888_-	MFS transporter	NA	NA	NA	NA
QAR39398.1\|28266_29253_+	LacI family transcriptional regulator	NA	NA	NA	NA
QAR39399.1\|29404_30192_-\|transposase	IS5 family transposase	NA	NA	NA	NA
QAR39400.1\|31320_31518_+	hypothetical protein	NA	NA	NA	NA
QAR39401.1\|31568_32450_+	filamentation induced by cAMP protein fic	NA	NA	NA	NA
QAR39402.1\|32439_32718_-	hypothetical protein	NA	NA	NA	NA
QAR39403.1\|32737_32947_-	hypothetical protein	NA	NA	NA	NA
QAR39404.1\|33219_35283_+	nickase	NA	NA	NA	NA
QAR39405.1\|36841_37345_+	type 1 glutamine amidotransferase	NA	NA	NA	NA
QAR39406.1\|38275_38527_+\|transposase	IS3 family transposase	Q6J1X3	Lactobacillus_phage	9.2e-38	96.4
QAR39407.1\|38580_39273_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	1.5e-117	97.7
QAR39408.1\|39211_39412_+	hypothetical protein	Q6J1X2	Lactobacillus_phage	4.9e-26	100.0
QAR39409.1\|39836_40259_+	Spx/MgsR family RNA polymerase-binding regulatory protein	NA	NA	NA	NA
QAR39410.1\|40788_42048_-	cytochrome P450	NA	NA	NA	NA
QAR39492.1\|42480_42534_+	hypothetical protein	NA	NA	NA	NA
QAR39493.1\|42709_43546_-\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	3.0e-24	32.2
QAR39411.1\|43832_46100_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	2.0e-126	30.9
QAR39412.1\|46384_46945_+	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA
QAR39413.1\|46956_47142_+	DUF2273 domain-containing protein	NA	NA	NA	NA
QAR39414.1\|47169_47712_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
QAR39415.1\|47726_47978_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
QAR39416.1\|47988_48129_+	hypothetical protein	NA	NA	NA	NA
QAR39417.1\|48467_49643_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.1e-27	29.2
QAR39418.1\|49804_50260_+	hypothetical protein	NA	NA	NA	NA
QAR39419.1\|50321_50564_-	hypothetical protein	NA	NA	NA	NA
QAR39420.1\|50812_51121_-	hypothetical protein	NA	NA	NA	NA
QAR39421.1\|51113_51980_-	ParA family protein	F0PIG8	Enterococcus_phage	3.4e-55	44.4
QAR39422.1\|52514_52697_-	hypothetical protein	NA	NA	NA	NA
QAR39423.1\|53266_53956_+	hypothetical protein	NA	NA	NA	NA
QAR39424.1\|54636_55323_+	MgtC/SapB family protein	G3MA03	Bacillus_virus	1.2e-18	39.3
QAR39494.1\|55803_56103_+	replication protein	NA	NA	NA	NA
QAR39425.1\|57130_57409_-	hypothetical protein	NA	NA	NA	NA
QAR39426.1\|57425_57641_-	hypothetical protein	NA	NA	NA	NA
QAR39427.1\|57911_59972_+	nickase	NA	NA	NA	NA
QAR39428.1\|62215_62431_+	hypothetical protein	NA	NA	NA	NA
QAR39429.1\|62434_63559_+	hypothetical protein	NA	NA	NA	NA
QAR39430.1\|63699_63804_-\|holin	putative holin-like toxin	NA	NA	NA	NA

DBSCAN-SWA_2

74749 : 135355

unidentified_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAR39435.1\|74749_75679_-\|transposase	IS30 family transposase	NA	NA	NA	NA
QAR39495.1\|75705_75789_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
QAR39436.1\|78030_78219_-	hypothetical protein	NA	NA	NA	NA
QAR39437.1\|79347_79566_+	hypothetical protein	NA	NA	NA	NA
QAR39438.1\|79904_80825_-	prenyltransferase	NA	NA	NA	NA
QAR39439.1\|81700_83113_+	MATE family efflux transporter	NA	NA	NA	NA
QAR39440.1\|83366_83951_+	recombinase family protein	A0A219YA40	Aeromonas_phage	6.5e-18	35.5
QAR39441.1\|83999_84863_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-18	28.8
QAR39442.1\|84864_85725_+	ABC transporter permease	NA	NA	NA	NA
QAR39443.1\|85970_86513_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
QAR39444.1\|86595_86790_-	hypothetical protein	NA	NA	NA	NA
QAR39496.1\|86809_88579_-	oleate hydratase	NA	NA	NA	NA
QAR39445.1\|89003_89222_-	hypothetical protein	NA	NA	NA	NA
QAR39446.1\|90267_91434_-	MFS transporter	NA	NA	NA	NA
QAR39447.1\|91533_92550_-	general stress protein	NA	NA	NA	NA
QAR39448.1\|92571_93942_-	MFS transporter	NA	NA	NA	NA
QAR39449.1\|94109_94358_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
QAR39450.1\|94702_94900_+	hypothetical protein	NA	NA	NA	NA
QAR39451.1\|94877_95351_+	DUF4355 domain-containing protein	NA	NA	NA	NA
QAR39452.1\|96145_97885_-	pyruvate oxidase	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	9.6e-33	26.8
QAR39453.1\|97991_98921_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	28.1
QAR39454.1\|98947_99079_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
QAR39455.1\|99218_100160_+	LysM domain-containing protein	K4ID66	Lactobacillus_phage	4.7e-10	55.7
QAR39456.1\|101620_101722_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
QAR39457.1\|101808_102156_-	hypothetical protein	NA	NA	NA	NA
QAR39458.1\|102157_102958_-	ParA family protein	F0PIG8	Enterococcus_phage	2.1e-67	50.6
QAR39459.1\|103396_103603_-	hypothetical protein	NA	NA	NA	NA
QAR39460.1\|103815_104094_+	hypothetical protein	NA	NA	NA	NA
QAR39461.1\|104486_104750_-	hypothetical protein	NA	NA	NA	NA
QAR39462.1\|104798_105728_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	9.7e-24	28.4
QAR39497.1\|105754_105835_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
QAR39463.1\|105986_107363_-	sugar porter family MFS transporter	NA	NA	NA	NA
QAR39464.1\|107630_107921_-	hypothetical protein	NA	NA	NA	NA
QAR39465.1\|108073_108283_-	hypothetical protein	NA	NA	NA	NA
QAR39466.1\|108555_110619_+	nickase	NA	NA	NA	NA
QAR39467.1\|112973_113189_+	hypothetical protein	NA	NA	NA	NA
QAR39468.1\|113514_114678_+	glycosyltransferase family 1 protein	NA	NA	NA	NA
QAR39469.1\|118071_118335_+	hypothetical protein	NA	NA	NA	NA
QAR39470.1\|118449_120222_+	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA
QAR39471.1\|120270_122352_+	K(+)-transporting ATPase subunit B	E4ZFI9	Streptococcus_phage	1.2e-32	28.1
QAR39472.1\|122370_122970_+	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA
QAR39473.1\|123917_124838_+\|transposase	IS30-like element ISLsa1 family transposase	Q9MBM9	Staphylococcus_prophage	7.8e-50	37.9
QAR39474.1\|126897_127599_+	response regulator transcription factor	NA	NA	NA	NA
QAR39475.1\|127764_129801_+	potassium transporter Kup	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	1.4e-62	33.2
QAR39476.1\|130183_130621_+	MarR family transcriptional regulator	NA	NA	NA	NA
QAR39477.1\|131000_131555_+	recombinase family protein	A0A1J1J8Z4	Escherichia_phage	3.4e-32	44.6
QAR39478.1\|132393_133086_+	hypothetical protein	NA	NA	NA	NA
QAR39479.1\|133102_134032_-\|transposase	IS30 family transposase	NA	NA	NA	NA
QAR39498.1\|134058_134142_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
QAR39480.1\|134116_135355_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	4.6e-37	28.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP035114

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP035113

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP035115

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. CP035116

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection