CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP019384	Vampirococcus sp. LiM chromosome, complete genome	3 crisprs	RT,cas3,csa3	1	0	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP019384_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019384_1

875578-875727

Orphan

Consensus_repeat	Method
CGCCAGAGGCGACTCGAAAATTCACTTCGCATGTTCGGGACACATTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP019384_1

>merge|CP019384|1|875578-875727|CRISPRCasFinder
CGCCAGAGGCGACTCGAAAATTCACTTCGCATGTTCGGGACACATTTCGCCAGAGGCTTCTGATCGTCCCTGAACATAAGCGCTCGATAATTTTCTCGTAGCCGCCAGAGGCGACTCGAAAATTCTCTTCGCATGTTCGGGACACATTTC

>CP019384|1|1|875578-875727|CRISPRCasFinder
CGCCAGAGGCGACTCGAAAATTCACTTCGCATGTTCGGGACACATTTC	GCCAGAGGCTTCTGATCGTCCCTGAACATAAGCGCTCGATAATTTTCTCGTAGC
CGCCAGAGGCGACTCGAAAATTCTCTTCGCATGTTCGGGACACATTTC

Protein	Signature genes	Signature genes Name	Protein_function
CP019384.1\|QAT16934.1\|866868_867702_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237820
CP019384.1\|QAT16952.1\|889917_891111_-\|electron-transfer-flavoprotein-subunit-alpha	unknown	unknown	gnl\|CDD\|224936
CP019384.1\|QAT16951.1\|886623_889905_-\|chromosome-segregation-protein-SMC,-common-bacterial-type	unknown	unknown	gnl\|CDD\|274008
CP019384.1\|QAT16942.1\|874661_875387_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224495
CP019384.1\|QAT16950.1\|885378_886584_+\|response-regulator-PleD	unknown	unknown	gnl\|CDD\|143635
CP019384.1\|QAT16944.1\|878007_878904_-\|UbiA-prenyltransferase	unknown	unknown	gnl\|CDD\|260125
CP019384.1\|QAT16949.1\|884473_885037_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367140
CP019384.1\|QAT16945.1\|879073_879589_-\|nitroreductase-family-protein	unknown	unknown	gnl\|CDD\|380311
CP019384.1\|QAT16941.1\|872803_873556_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|234640
CP019384.1\|QAT16939.1\|871641_872313_-\|Holliday-junction-DNA-helicase-RuvA	unknown	unknown	gnl\|CDD\|234645
CP019384.1\|QAT16947.1\|881188_883030_-\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
CP019384.1\|QAT16948.1\|883419_884418_-\|NGG1p-interacting-factor-NIF3	unknown	unknown	gnl\|CDD\|223404
CP019384.1\|QAT16946.1\|879615_881172_-\|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl\|CDD\|235549
CP019384.1\|QAT16936.1\|868714_869815_-\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|235064
CP019384.1\|QAT16933.1\|866188_866863_-\|cytidylate-kinase	unknown	unknown	gnl\|CDD\|234579
CP019384.1\|QAT16938.1\|870872_871607_-\|SMC-Scp-complex-subunit-ScpB	unknown	unknown	gnl\|CDD\|377219
CP019384.1\|QAT16937.1\|869821_870883_-\|chorismate-mutase	unknown	unknown	gnl\|CDD\|223155
CP019384.1\|QAT16940.1\|872309_872795_-\|crossover-junction-endodeoxyribonuclease-RuvC	unknown	unknown	gnl\|CDD\|340813
CP019384.1\|QAT16943.1\|876775_877663_-\|type-IV-fimbrial-assembly,-ATPase-PilB	unknown	unknown	gnl\|CDD\|274186
CP019384.1\|QAT16935.1\|867701_868718_-\|3-deoxy-7-phosphoheptulonate-synthase	unknown	unknown	gnl\|CDD\|181535

Protein	Function_ID	Function_description	E-value
CP019384.1\|QAT16934.1\|866868_867702_-\|hypothetical-protein	gnl\|CDD\|237820	PRK14806, PRK14806, bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional.	4.0904e-68
CP019384.1\|QAT16952.1\|889917_891111_-\|electron-transfer-flavoprotein-subunit-alpha	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	4.66925e-135
CP019384.1\|QAT16951.1\|886623_889905_-\|chromosome-segregation-protein-SMC,-common-bacterial-type	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	6.34395e-119
CP019384.1\|QAT16942.1\|874661_875387_-\|hypothetical-protein	gnl\|CDD\|224495	COG1579, COG1579, Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only].	5.32273e-27
CP019384.1\|QAT16950.1\|885378_886584_+\|response-regulator-PleD	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.44545e-61
CP019384.1\|QAT16944.1\|878007_878904_-\|UbiA-prenyltransferase	gnl\|CDD\|260125	cd13962, PT_UbiA_UBIAD1, 1,4-Dihydroxy-2-naphthoate octaprenyltransferase. Human UBIAD1 is an enzyme involved in the synthesis of MK-4. Menaquinones (MKs, also called bacterial forms) are one of the two forms of natural vitamin K, the other being the plant form, phylloquinone (PK). All forms of vitamin K have a 2-methyl-1,4-naphthoquinone (menadione; K3) ring structure in common. At the 3-position of the ring, PK has a phytyl side chain while MKs have several repeating prenyl units. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways.	4.21878e-54
CP019384.1\|QAT16949.1\|884473_885037_-\|hypothetical-protein	gnl\|CDD\|367140	pfam02674, Colicin_V, Colicin V production protein. Colicin V production protein is required in E. Coli for colicin V production from plasmid pColV-K30. This protein is coded for in the purF operon.	8.06901e-09
CP019384.1\|QAT16945.1\|879073_879589_-\|nitroreductase-family-protein	gnl\|CDD\|380311	cd02062, Nitro_FMN_reductase, nitroreductase family protein. Proteins of this family catalyze the reduction of flavin or nitrocompounds using NAD(P)H as electron donor in a obligatory two-electron transfer, utilizing FMN or FAD as cofactor. They are often found to be homodimers. Enzymes of this family are described as NAD(P)H:FMN oxidoreductases, oxygen-insensitive nitroreductase, flavin reductase P, dihydropteridine reductase, NADH oxidase or NADH dehydrogenase.	4.45653e-41
CP019384.1\|QAT16941.1\|872803_873556_-\|transcriptional-regulator	gnl\|CDD\|234640	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator.	2.54484e-134
CP019384.1\|QAT16939.1\|871641_872313_-\|Holliday-junction-DNA-helicase-RuvA	gnl\|CDD\|234645	PRK00116, ruvA, Holliday junction branch migration protein RuvA.	3.18093e-39
CP019384.1\|QAT16947.1\|881188_883030_-\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	0
CP019384.1\|QAT16948.1\|883419_884418_-\|NGG1p-interacting-factor-NIF3	gnl\|CDD\|223404	COG0327, COG0327, Uncharacterized conserved protein [Function unknown].	0.000410649
CP019384.1\|QAT16946.1\|879615_881172_-\|RNA-polymerase-sigma-factor-RpoD	gnl\|CDD\|235549	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated.	0
CP019384.1\|QAT16936.1\|868714_869815_-\|histidinol-phosphate-transaminase	gnl\|CDD\|235064	PRK02731, PRK02731, histidinol-phosphate aminotransferase; Validated.	1.12567e-156
CP019384.1\|QAT16933.1\|866188_866863_-\|cytidylate-kinase	gnl\|CDD\|234579	PRK00023, cmk, (d)CMP kinase.	2.35329e-97
CP019384.1\|QAT16938.1\|870872_871607_-\|SMC-Scp-complex-subunit-ScpB	gnl\|CDD\|377219	pfam04079, SMC_ScpB, Segregation and condensation complex subunit ScpB. This is a family of prokaryotic proteins that form one of the subunits, ScpB, of the segregation and condensation complex, condensin, that plays a key role in the maintenance of the chromosome. In prokaryotes the complex consists of three proteins, SMC, ScpA (kleisin) and ScpB. ScpB dimerizes and binds to ScpA. As originally predicted, ScpB is structurally a winged-helix at both its N- and C-terminal halves. IN Bacillus subtilis,one Smc dimer is bridged by a single ScpAB to generate asymmetric tripartite rings analogous to eukaryotic SMC complex ring-shaped assemblies.	9.17098e-65
CP019384.1\|QAT16937.1\|869821_870883_-\|chorismate-mutase	gnl\|CDD\|223155	COG0077, PheA, Prephenate dehydratase [Amino acid transport and metabolism].	3.74466e-120
CP019384.1\|QAT16940.1\|872309_872795_-\|crossover-junction-endodeoxyribonuclease-RuvC	gnl\|CDD\|340813	cd16962, RuvC, Crossover junction endodeoxyribonuclease RuvC. Crossover junction endodeoxyribonuclease RuvC is also called Holliday junction resolvase RuvC. It is part of the RuvABC pathway in Escherichia coli and other Gram-negative bacteria that is involved in processing Holliday junctions, which are formed by the reciprocal exchange of strands between two DNA duplexes. Holliday junction resolvases (HJRs) are endonucleases that specifically resolve Holliday junction DNA intermediates during homologous recombination. RuvC is thought to bind either on the open, DNA exposed face of a single RuvA tetramer, or to replace one of the two tetramers. Binding is proposed to be mediated by an unstructured loop on RuvC, which becomes structured on binding RuvA. RuvC can be bound to the complex in either orientation, therefore resolving Holliday junctions in either a horizontal or vertical manner. HJRs occur in archaea, bacteria, and in the mitochondria of certain fungi. These are referred to as the RuvC family of Holliday junction resolvases, RuvC being the Escherichia coli HJR. RuvC and its orthologs are homodimers and display structural similarity to RNase H and Hsp70.	2.10115e-54
CP019384.1\|QAT16943.1\|876775_877663_-\|type-IV-fimbrial-assembly,-ATPase-PilB	gnl\|CDD\|274186	TIGR02538, Type_IV_pilus_assembly_protein_PilF, type IV-A pilus assembly ATPase PilB. This model describes a protein of type IV pilus biogenesis designated PilB in Pseudomonas aeruginosa but PilF in Neisseria gonorrhoeae; the more common usage, reflected here, is PilB. This protein is an ATPase involved in protein export for pilin assembly and is closely related to GspE (TIGR02533) of type II secretion, also called the main terminal branch of the general secretion pathway. Note that type IV pilus systems are often divided into type IV-A and IV-B, with the latter group including bundle-forming pilus, mannose-sensitive hemagglutinin, etc. Members of this family are found in type IV-A systems. [Cell envelope, Surface structures, Protein fate, Protein and peptide secretion and trafficking].	2.19953e-18
CP019384.1\|QAT16935.1\|867701_868718_-\|3-deoxy-7-phosphoheptulonate-synthase	gnl\|CDD\|181535	PRK08673, PRK08673, 3-deoxy-7-phosphoheptulonate synthase; Reviewed.	0

>CP019384.1|QAT16942.1|874661_875387_-|hypothetical-protein
MSTPDIRTELIKLVELQGLDKKIFELNQKKEEVPLILERLQKAFEGKKADYKTLESNLQKTQLQQKEKEGDLNAKEEGIKKSQSQLGALKTNKEYQAKLAEIESLKADKSVIEEEILKLMDEVETAKKALDEEKKILAGEEKIYNEEKRAVEEQAKDIEASLQAEQGKRQIAAAGVDKKILQAYEHILHGRGGVALVKVSNNSCEGCHMRVPHQVINEIKMYNRLITCENCSRILYLEEGE
>CP019384.1|QAT16941.1|872803_873556_-|transcriptional-regulator
MSGHSKWASIKHKKAAIDAKRGQLFTKLIKELTAAARSGGGNMETNIRLRTAVAKAKEGNMPWDNIEKAIMRGTGELPGVTYEEVTYEGYGPAGIAIMIDVVTDNKNRTTAELRNMMSKKGGNMAQAGAVSFLFQKKGFLTVDKKAIGEDKLMDIVLNAGAEDMKSEADVYEITTQPHDLESVKNALTAVKIPFENAEITMIPTSTIKIAEKNTANTILSLMDSLEEHEDVQHVYANFDIPDELIESTGE
>CP019384.1|QAT16940.1|872309_872795_-|crossover-junction-endodeoxyribonuclease-RuvC
MLILGIDPGLHVTGYGLIEADRHGFTIKKSGFIKTRIKDELPKRLLQIHGELAEILDRHKPDALVLEKLYAHYKHPLTASLLGHARGVICMLAEEKKVAFFEYPATRVKQVTTGHGHASKEQVQKMIEHMFGAARESFGPVDTTDAISLAVTHALTIRAKL
>CP019384.1|QAT16939.1|871641_872313_-|Holliday-junction-DNA-helicase-RuvA
MIARIGGKLIEKRKNSVILENQGIAYEIFLPVITMTALDNHVDQDGCVRFITYHYHQLEPSRSTPVLIGFLNEIEKEFFEEFITVSGIGPKAALRAINTSIASIARAIDEADVAFLKSLPGIGPQRAKEIIAKLQGKIGKFGLIQEEGASKTAPLPKDIIDEAVDILMQLQYKKHEAKEMIQEAIKKQPLFKDAEELLNFVYKQRINSSPSAAVRRARPERYA
>CP019384.1|QAT16938.1|870872_871607_-|SMC-Scp-complex-subunit-ScpB
MTDMLDPLQIKTDLEALIFVSTKPLLLEDIKKVFTNLQTSEIRDLIESLKKEYEERSSGIRIIEIAGGFQMATAPESAATIKEFYKIKHTEKLTGPSLEALAIIAYKQPVTRIDIEAVRGVNCDGVVKSLLEKNLIRIVGRKEVIGRPFVYGTTRFFLDYFGLKSLNELPKIEEFAQKDMLMNMKLASGEGEITPLSSEEERTLSQESGAAETTPPIREEETAAPEGASQETEPPILKETTDGH
>CP019384.1|QAT16937.1|869821_870883_-|chorismate-mutase
MAIKHLRKDIDAIDKEIVKLLNKRACWILEIGKMKNKTGEAVYAPAREKEVLSKIIRENQGPLNKETLTAIWREIMSASLAMEKPLVIAYMGPRTTFSHLAALKKFGASVSYLSCNTITDVFMEVEKDNADYGVIPIENSIEGAISHTLDMLVDSDLSICSQVMLDISHNLLSKHLKDAIVNIYSNPQVFGQCRLWLESNLPKADLIEVSSTTRAAQIAAKEPRSACIASLLAAKEYGLKVVAREIEDSPHNITRFLVVGKSQAQRTGRDKTSIMFSIKDRVGALHDMLLPFKKYGINLTKIESRPSKRKAWDYFFFVDLTGHIQDDKVKKALMALEDKCKFLKVLGSYPVTE
>CP019384.1|QAT16936.1|868714_869815_-|histidinol-phosphate-transaminase
MKMEPIRKDIDNIDAYKPGKPIEEVKRELGIADVTKLASNENALGPSPRAIAAAKKALPSLNRYPEGSCYYLKRKLARLLGIKEVNLLFGNGSDELIDVILKTIKAPDAEIITADVTFVEYKISGSINGFKVISVPLKDFTFDLEAMAGRITPKTKAVFIANPNNPTGTYVTTRQVLEFLDRIPREVMVVFDEAYVEFAQKEDFPKILELLGHKNVAILRTFSKIYGLAGLRVGYMIADEEFVAAAERIRQPFNVNSVAQAAACAALDDKAFVRKSMTLVAREMKFMEKALTDLGVWFKKSAANFIFVRTGMDARSLFGKMLKKGVIIREMSQYNLDNYSRITIGTRRENIKLIRALRDIIKEDSR
>CP019384.1|QAT16935.1|867701_868718_-|3-deoxy-7-phosphoheptulonate-synthase
MIIVLRPDAKKEDIDHILDRADKLGLKPHISKGTERTIIGLIGPEDALRAIPLEAFHGVENVIPILAPYKLVSREFKKENSVIPIGEHLKIGAKKVVIFAGPCAIENEDLLVEIGEEVKFAGASVLRGGAYKPRTSPYAFQGMGLEGLKILSRVSKKLNMPTVTEVMDVRDVGTVAQYADILQIGARNMQNFTLLKEVGLTRKPILLKRGLANTVKELLMSAEYIMAEGNHNVILCERGIRTFEDATRNTFDVSAIPVVKQLSHLPIIADPSHAAGKWNLVAPLSCAAVAAGADGLIIEAHTKPEEALSDGAQSLLPEKLTTLIQNLEKIALAIHREI
>CP019384.1|QAT16934.1|866868_867702_-|hypothetical-protein
MRRPLFRKITIVGVGLLGGSIGMAVKRLNLSKEVCGYFRNHKKIAQAKRYGAIDTGTNRFAAAVEHSDLIILCSPVEDIKTKLGALKRLGMTKPLITDVGSTKAEIIRAAKGLNFVGSHPLAGSEQSGVSHSRPDLFKGSICIVIPDQAPRSSVRTVCRFWKTLGSRVVTLSALKHDTALAFTSHLPHAVAFTLAAVMPDHCERFAAGGLKDTTRIALSHPEVWSDILLSNRTNVLKSLDAFERSLKRLKSAVAAKNRKTLKKLLVCSRNKRRRILS
>CP019384.1|QAT16933.1|866188_866863_-|cytidylate-kinase
MTDLKPIVAIDGPAGSGKSTVARAVARKLGLFYIDTGAMYRALALKARQEAVDPNDAPAVIALARHTRIDLSYDPREGTLRVDLDGRDVSQDIRRPEITEHVSVIAKIKEVREIMVGLQRSLAEGRRAILEGRDIGTVVFPDAYKKFFLDAACEERVRRRYLEMKEKNIPVEQQGVQNDIETRDRIDSTRACAPLRRTPDAVYIDTTRMTIDEVVAAVIAEINR
>CP019384.1|QAT16943.1|876775_877663_-|type-IV-fimbrial-assembly,-ATPase-PilB
MFMNLNTEINLGTSLMEKRLITAEQLKDAYEHLKIKGGYLSQRLIELGYIKEADIATHLTCEFGYSYIPLKSYIVTEDALACIPAEFACDFCVLPIEKHDKLLTIAMADPLNKGVIELIRQISRCEIVVLISIRSEIRQSIERYYGGHFKEFELDRYKDDVVLRDNLMEKEISNGLYTGVNRRRYKRMQVGLAAEYYVYPNFVKTEIKNLSMGGILFETQNYLHPGTELAINIHLDNYRYITAVVEVSRSEPVNIINAGWDTTSRVIHETGAFFSFMPEKNQEMLAQFLKHMIKS
>CP019384.1|QAT16944.1|878007_878904_-|UbiA-prenyltransferase
MSLPGRFLTVIRGWSLPLSISSVTLGTTAAATTQRGSAWLYLLVVFGVCLFHACANTFNDYFDLKYGVDTPEAPTAIYRAHGVFAGLIAPKALFYLSIILLTIALLIGAALAILRTAYLWPLIILGLFLNLFYTALPGHALKYTALGEPAVFLAFGPVIMEGSFAVQTGYLSWNVFLLSLPVGILVALVLFANNLRDREFDSCKKIKTLATLLGPRAGMKTFIALAYLPYMITGAYVGMKILDWPGLFVLFSLPTTVRTVRSFSQNIPVAADAMASETALSFNFFLLISLIINILIKI
>CP019384.1|QAT16945.1|879073_879589_-|nitroreductase-family-protein
MKDILNIIKTRRSVRHFSDKKLPAAGIVKILEAGRWAPSGLNNQPWRFLVVEDKGLRDRIAAFTAYGSVIRRAAAILIVCLDTADSYNRDKDLMAVGASIQNMLLEAKNLGIGTCWLGEILNKKREVADTLELNKDLDLLAVVAMGYPAGKKQKGCRKALKELLINGSKYS
>CP019384.1|QAT16946.1|879615_881172_-|RNA-polymerase-sigma-factor-RpoD
MEKPVVKKSLDKLIALGKKKGYLTYDEVNDVLPEDIVSSDDIDEVFEMLNDEDIQIVDNELTEEKLEDISKTEEPKELDEVEDRLLPLDDPVKMYLKQMGRISLLSREDELRLAKKIEETENNFRQLLLSSRFVKHAVVLLIKQVLTNEVHIENVVKEDIAIKREKTLKKFSTTLKKLLKTKKDDATAAYLSDLNLATPALEDIVHQMIGLVRQADAADRDLKKIREKKSKGDSRALRQKKNKALRQMGMVPKKFKEQLKLIKIRHARFQRAKKALVEANLRLVVSIAKRYTNRGLSFLDLIQEGNIGLMRAVEKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMTETINKIIRISRIFVQEYGREPSPEEIAKSMRMPQDKIKNILKIAQEPISLQTPIGDEGDTHFGDFIEDKRAISPANATVHVMLKDEMNSALNTLTEREKKILMLRFGISDGAPKTLEEVGNVFKVTRERVRQIEAKALRKLRHPSRSRKLRTFLDMTLAHEREY
>CP019384.1|QAT16947.1|881188_883030_-|DNA-primase
MPRLYPDNLISDVLDRCNIVELISSYIPLKRAGRNFRANCPFHAEKTPSFIVSTDKQIFHCFGCGQGGNAITFVMQYEKVGFREALETVAQRCGIPLPEPELTPSQKGREDNRKTLQGLYEQAASFYHARLFQASDAKNARNYLAGRGISKETAQRFRLGHAPEGWDSLIAHFKSQKVSLAALDKSGLIVAKENGGYYDRYRNRIMFPIADIKGRVIAFGGRVLDDSLPKYINSPETAVYIKGKNLFGLDVSKEYIRQADQVVVVEGYLDMIVPFEAGVKNIVASLGTALTEDQIRLIKRFTNRVVLLYDPDAAGEMATLRALELLIKEDMDIRIASLPKGKDPDAFVRHNGGGALKEIIDKALPIFDYKLNLLLAKYDAKSTHGKDKIVREILPTIRHFKHHTTRAEYVKRAAASVGVDEEALLQDLKNMTETARPAAAPDNDALAFSALEHQRLTEIPVTERMLVKLMLEEMHLIDHLRQLIEPSDFVSDELRKIVTFIFDFFDQGKNLKPNVLMHYLDDDEAINIIAELAALDIHNCPEKEKLIEDCVRRLKRDKILHRCQELHNRIREAQTSGDEGKLHHLVLEYNNLIKKRSAETAGYGTAAKSDRHP
>CP019384.1|QAT16948.1|883419_884418_-|NGG1p-interacting-factor-NIF3
MKLQKIYEFIIASGIEADPRGAKTVQECLKQTSEEYAALSAKEKAWFDTDKLKNPYDDSRLLNGQPDKEIKTIMAGIDIDTSELLLIDRLNESARGAGRQKIDLALSHHPQGKGFAGLHEVMRMQADIYEQIGIPVNVAEGLLGERLKEVGRRIHAANHQRAANAAQLLGIPFICAHTPADNHAVSFLQKLFDRKKPKQLKDVIDLLLDIDEYKIAAKNNNPPVILFGAPRNKTGKIFVDMTGGTEGPKDIADHLLAAGVGTLVGMHVSDEFYKKLQSKNIHVIVAGHISSDSLGLNLLLDKLEKSGNLKVLSCSGFTRVKRSSEAQTYRTK
>CP019384.1|QAT16949.1|884473_885037_-|hypothetical-protein
MLTKYFIGINWVDFLMIAVILRMCYIGVKTGFIVELFKLFSLWLVTVTAFHVYTTPLSDMLNQKLPALPLDAGDVFVFIALVVLVTLLIRIVRESFFLLIKIEAKNVVDKWAGLFIGFVRGLWICSIGLFIMTISTIQYLEVSAKSSLFGHKLIAMAPAIYKGSYEGLIGKFFPGKLNPEPFRAIER
>CP019384.1|QAT16950.1|885378_886584_+|response-regulator-PleD
MENQDKARTINDQDVLLEQLAKARQELSTLYEISNAMHKTLALDEILFIILTGVTSHSGLGFNRAMLFLLDSSAKFLEGRIGIGPDNGEEAKRIWRLIDEQKMDLDDLVNSYAQTHEVIKGSKFFNQVKSVRMPVKEPDGGILAKVFNDGMPFHFKKDNLQSFTGDPLFAIFPSDEFVVIPLKAKDRSNGLIVADNIFTKRSITKDDIRVLMMFANQAGMAIENSQLYERTLIKAHKDALTDLWNHGYFQYVCDEELRRAKDHMSYLSLIMLDIDNFKNYNDTWGHQKGDEILARISQIIMESSRKIDKVCRYGGEEFAVILPDAAKRDVLVVAERIRANIEQCTFTTGTDHPSQKITVSIGVASFPENGKTKLELIRAADAALYDAKKQGKNRVACPPVP
>CP019384.1|QAT16951.1|886623_889905_-|chromosome-segregation-protein-SMC,-common-bacterial-type
MYFKKLEIAGFKSFAEKTVLHFEPGITAIVGPNGCGKSNIFDSMRWCLGEQSIKSLRGAKMEDVIFNGTENVPAQNMAEVSLTISNEAKILPIDYDEVTITRRLFRSGESEYLINNNTVRLKDINELLMGTGIGAESYSLVEQGKIDLVISSKPEDRRLVFDEATGVSKYKVKKKEAMRKLEETDNNLLRVNDIITEVKRQIGSIERQASKARRYKEVFEKLKSSEMAFAAIELKTIKGEAAVVGEMAKKGTQEEVQFNAELQTLDGRLMRQQQELQELDGRIAEMKEEISSLENSSTTCRQHINLNMDRMGDLGQRIQVLTGQEQQLTPKIASHQGNIDELSEQLARLNEVFSEKESHFKEREALLAKMDEDLNRLQAENKELKNRIFELNLNETKTSNLLNENSSSLHGLLARQRRLETEKLKTEEENAQLLKNIEAMGLEISQEKTKIEEIQSRLTGLKAEQAKREAGLKEMDARLRSLENEKLGLQSQIEFLKELRLKYDSMPEAQLGTLEIHGPIDGKISGIIAHARDIAYDEKTATTRITCELKFISFDLEGLEQRSKDIDAETQNLRAELSAKEKELLQIVEDAHKIDEELQQEKFTLTNKEAVNTNLTENARKIQDEISVITLELQDVTQELGTAKGRDEQYRNELNVLSAELTSCDNKITQNTEQAVKISAERETVLVEITQLKAELDNQKAKEDGLRANLKLFEDALNADNHTLTLARQEIAESQEKTRLLEEETQNLEIKIKANEETVNKKSEELRSQSQLRIEEVNAIDFIQKQIMDLEEKLDRIKESIHHYQMQEQEMHFKLTNIKNRILSTYNVDLDDAATVAPEPAEGVDVQALQQEIQSLREKVESFGTVNLVAIEELEELKNRFDFLTQQQNDLVTAKESLKNAILKINRNTRKMFLETFQIVAEEFKNYFRLLFGGGEAKLFLMDEEDVLESGIEIICRPPGKKLQNITLLSGGEKSLAAIALIFAIFKTKPSPFCVLDEIDAALDESNIDRFSRMLGDFAKTSQFITITHNKKTISRANVMYGITMERSGMSKIVSVKLHENAQAKAAAAPAEPQPQPQEDAKEKTPETTSEAA
>CP019384.1|QAT16952.1|889917_891111_-|electron-transfer-flavoprotein-subunit-alpha
MSLIINKEKCVGCTLCVKACPFGALYMENKKAVVRPEQCTLCGACVEACKFDVISIKREKTAQADAQARGVWVFCEQKRGVVQSVSFELLGKGRELANKLGCELCGVLIGHDIESKSQDIIQRGADTVYVVDHPQLKHYVDDAYTAVLVRLIKKYKPEIVLCGATSIGRSLISRVAVKIHTGLTADCTGLDIDPHKKILLQTRPAFGGNIMATIITPNHRPQMATVRHKVMKEAVLDPSRHGKLVKENFEDNVYVSRTKILDIIEDVSATVNIAEADIIVSGGRGIKGPENFKIIEELAEVLNGAVGASRAAVDSGWIPYSHQVGQTGKTVCPSIYIACGISGQIQHLVGMQSSKTIIAINNDPGAPIFQIASYGIVGDLFEVVPLLTKTLREKLRK

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Crispr_ID: CP019384_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019384_2

1062302-1062425

Orphan

Consensus_repeat	Method
CAAGCACTCGACCATTTTTTCCTTATCGGAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP019384_2

>merge|CP019384|2|1062302-1062425|CRISPRCasFinder
CAAGCACTCGACCATTTTTTCCTTATCGGAAAACACTGTGGTGGTCGGCACTTGTTCGGCCTGCTCGCCTTATCGGCTCGCCGCGGCCTCACAAGCACTCGACCATTTTTTCCTTATCGGAAAA

>CP019384|2|2|1062302-1062425|CRISPRCasFinder
CAAGCACTCGACCATTTTTTCCTTATCGGAAAA	CACTGTGGTGGTCGGCACTTGTTCGGCCTGCTCGCCTTATCGGCTCGCCGCGGCCTCA
CAAGCACTCGACCATTTTTTCCTTATCGGAAAA

Protein	Signature genes	Signature genes Name	Protein_function
CP019384.1\|QAT17099.1\|1058673_1059321_-\|phosphopantothenoylcysteine-decarboxylase-/-Phosphopantothenoylcysteine-synthetase	unknown	unknown	gnl\|CDD\|377227
CP019384.1\|QAT17108.1\|1067719_1068109_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|381093
CP019384.1\|QAT17104.1\|1063287_1064289_-\|glycerol-3-phosphate-dehydrogenase-[NAD(P)+]	unknown	unknown	gnl\|CDD\|234629
CP019384.1\|QAT17109.1\|1068112_1072588_-\|transmembrane-receptor-with-multiple-PAS-sensor-domains-and-histidine-kinase-domain	unknown	unknown	gnl\|CDD\|380161
CP019384.1\|QAT17111.1\|1074613_1075465_-\|NAD(P)H-hydrate-dehydratase	unknown	unknown	gnl\|CDD\|238576
CP019384.1\|QAT17097.1\|1055686_1057294_-\|carbon-starvation-protein-A	unknown	unknown	gnl\|CDD\|224877
CP019384.1\|QAT17100.1\|1059317_1060391_-\|threonine-synthase	unknown	unknown	gnl\|CDD\|236013
CP019384.1\|QAT17106.1\|1066568_1067321_-\|thymidylate-synthase	unknown	unknown	gnl\|CDD\|238211
CP019384.1\|QAT17095.1\|1050092_1052882_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
CP019384.1\|QAT18021.1\|1049215_1050076_-\|nicotinate-nucleotide-diphosphorylase-(carboxylating)	unknown	unknown	gnl\|CDD\|238806
CP019384.1\|QAT17107.1\|1067337_1067715_-\|response-regulator	unknown	unknown	gnl\|CDD\|381093
CP019384.1\|QAT17103.1\|1062705_1062933_-\|hypothetical-protein	unknown	unknown	unknown
CP019384.1\|QAT17102.1\|1061865_1062270_-\|DoxX-family-protein	unknown	unknown	gnl\|CDD\|225168
CP019384.1\|QAT17096.1\|1054469_1055690_-\|aspartate-kinase	unknown	unknown	gnl\|CDD\|235843
CP019384.1\|QAT17098.1\|1057290_1058484_-\|cofactor-independent-phosphoglycerate-mutase	unknown	unknown	gnl\|CDD\|179781
CP019384.1\|QAT17112.1\|1075439_1075778_-\|holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|234610
CP019384.1\|QAT17105.1\|1064420_1066469_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|132844
CP019384.1\|QAT17101.1\|1060399_1061686_-\|homoserine-dehydrogenase	unknown	unknown	gnl\|CDD\|235783
CP019384.1\|QAT18020.1\|1052874_1054455_-\|citramalate-synthase	unknown	unknown	gnl\|CDD\|237068
CP019384.1\|QAT17110.1\|1074198_1074573_-\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|371647

Protein	Function_ID	Function_description	E-value
CP019384.1\|QAT17099.1\|1058673_1059321_-\|phosphopantothenoylcysteine-decarboxylase-/-Phosphopantothenoylcysteine-synthetase	gnl\|CDD\|377227	pfam04127, DFP, DNA / pantothenate metabolism flavoprotein. The DNA/pantothenate metabolism flavoprotein (EC:4.1.1.36) affects synthesis of DNA, and pantothenate metabolism.	5.07745e-39
CP019384.1\|QAT17108.1\|1067719_1068109_-\|hypothetical-protein	gnl\|CDD\|381093	cd17538, REC_D1_PleD-like, first (D1) phosphoacceptor receiver (REC) domain of response regulator PleD and similar domains. PleD contains a REC domain (D1) with the phosphorylatable aspartate, a REC-like adaptor domain (D2), and the enzymatic diguanylate cyclase (DGC) domain, also called the GGDEF domain according to a conserved sequence motif, as its output domain. The GGDEF-containing PleD response regulators are global regulators of cell metabolism in some important human pathogens. This model describes D1 of PleD and similar domains. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.43785e-34
CP019384.1\|QAT17109.1\|1068112_1072588_-\|transmembrane-receptor-with-multiple-PAS-sensor-domains-and-histidine-kinase-domain	gnl\|CDD\|380161	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK. This model describes WalK as found in Staphylococcus aureus (sp\|Q2G2U4.1\|WALK_STAA8). A shorter version, as found in Streptococcus pneumoniae, called WalK(Spn) or VicK, is not included. WalK is part of a two-component system and works with partner protein WalR.	1.19524e-52
CP019384.1\|QAT17111.1\|1074613_1075465_-\|NAD(P)H-hydrate-dehydratase	gnl\|CDD\|238576	cd01171, YXKO-related, B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.	4.44084e-91
CP019384.1\|QAT17097.1\|1055686_1057294_-\|carbon-starvation-protein-A	gnl\|CDD\|224877	COG1966, CstA, Carbon starvation protein, predicted membrane protein [Signal transduction mechanisms].	1.42282e-133
CP019384.1\|QAT17100.1\|1059317_1060391_-\|threonine-synthase	gnl\|CDD\|236013	PRK07409, PRK07409, threonine synthase; Validated.	0
CP019384.1\|QAT17106.1\|1066568_1067321_-\|thymidylate-synthase	gnl\|CDD\|238211	cd00351, TS_Pyrimidine_HMase, Thymidylate synthase and pyrimidine hydroxymethylase: Thymidylate synthase (TS) and deoxycytidylate hydroxymethylase (dCMP-HMase) are homologs that catalyze analogous alkylation of C5 of pyrimidine nucleotides. Both enzymes are involved in the biosynthesis of DNA precursors and are active as homodimers. However, they exhibit distinct pyrimidine base specificities and differ in the details of their catalyzed reactions. TS is biologically ubiquitous and catalyzes the conversion of dUMP and methylene-tetrahydrofolate (CH2THF) to dTMP and dihydrofolate (DHF). It also acts as a regulator of its own expression by binding and inactivating its own RNA. Due to its key role in the de novo pathway for thymidylate synthesis and, hence, DNA synthesis, it is one of the most conserved enzymes across species and phyla. TS is a well-recognized target for anticancer chemotherapy, as well as a valuable new target against infectious diseases. Interestingly, in several protozoa, a single polypeptide chain codes for both, dihydrofolate reductase (DHFR) and thymidylate synthase (TS), forming a bifunctional enzyme (DHFR-TS), possibly through gene fusion at a single evolutionary point. DHFR-TS is also active as a dimer. Virus encoded dCMP-HMase catalyzes the reversible conversion of dCMP and CH2THF to hydroxymethyl-dCMP and THF. This family also includes dUMP hydroxymethylase, which is encoded by several bacteriophages that infect Bacillus subtilis, for their own protection against the host restriction system, and contain hydroxymethyl-dUMP instead of dTMP in their DNA.	4.43347e-32
CP019384.1\|QAT17104.1\|1063287_1064289_-\|glycerol-3-phosphate-dehydrogenase-[NAD(P)+]	gnl\|CDD\|234629	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase.	1.2501e-152
CP019384.1\|QAT18021.1\|1049215_1050076_-\|nicotinate-nucleotide-diphosphorylase-(carboxylating)	gnl\|CDD\|238806	cd01572, QPRTase, Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid (QA) with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to produce nicotinic acid mononucleotide (NAMN), pyrophosphate and carbon dioxide. QPRTase functions as a homodimer with two active sites, each formed by the C-terminal region of one subunit and the N-terminal region of the other.	6.3174e-115
CP019384.1\|QAT17107.1\|1067337_1067715_-\|response-regulator	gnl\|CDD\|381093	cd17538, REC_D1_PleD-like, first (D1) phosphoacceptor receiver (REC) domain of response regulator PleD and similar domains. PleD contains a REC domain (D1) with the phosphorylatable aspartate, a REC-like adaptor domain (D2), and the enzymatic diguanylate cyclase (DGC) domain, also called the GGDEF domain according to a conserved sequence motif, as its output domain. The GGDEF-containing PleD response regulators are global regulators of cell metabolism in some important human pathogens. This model describes D1 of PleD and similar domains. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.34751e-33
CP019384.1\|QAT17102.1\|1061865_1062270_-\|DoxX-family-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	1.67747e-07
CP019384.1\|QAT17096.1\|1054469_1055690_-\|aspartate-kinase	gnl\|CDD\|235843	PRK06635, PRK06635, aspartate kinase; Reviewed.	0
CP019384.1\|QAT17098.1\|1057290_1058484_-\|cofactor-independent-phosphoglycerate-mutase	gnl\|CDD\|179781	PRK04200, PRK04200, cofactor-independent phosphoglycerate mutase; Provisional.	0
CP019384.1\|QAT17112.1\|1075439_1075778_-\|holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|234610	PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional.	1.20787e-38
CP019384.1\|QAT17105.1\|1064420_1066469_-\|hypothetical-protein	gnl\|CDD\|132844	cd07205, Pat_PNPLA6_PNPLA7_NTE1_like, Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE hydrolyzes sn-1 esters in lysophosphatidylcholine and lysophosphatidic acid, but shows no lipase activity with substrates like triacylglycerols (TG), cholesteryl esters, retinyl esters (RE), phosphatidylcholine (PC), or monoacylglycerol (MG). This family includes subfamily of PNPLA6 (NTE) and PNPLA7 (NRE)-like phospholipases.	9.27023e-62
CP019384.1\|QAT17095.1\|1050092_1052882_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
CP019384.1\|QAT17101.1\|1060399_1061686_-\|homoserine-dehydrogenase	gnl\|CDD\|235783	PRK06349, PRK06349, homoserine dehydrogenase; Provisional.	0
CP019384.1\|QAT18020.1\|1052874_1054455_-\|citramalate-synthase	gnl\|CDD\|237068	PRK12344, PRK12344, putative alpha-isopropylmalate/homocitrate synthase family transferase; Provisional.	0
CP019384.1\|QAT17110.1\|1074198_1074573_-\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|371647	pfam11645, PDDEXK_5, PD-(D/E)XK endonuclease. This family of endonucleases includes a group I intron-encoded endonuclease. This family belongs to the PD-(D/E)XK superfamily.	1.98763e-15

>CP019384.1|QAT17102.1|1061865_1062270_-|DoxX-family-protein
MVWSELSMHADAGLLVIRLVFGCMFVYYGWPKLVGGPVSWEGVGQAISAVGIRFGFVFWGFLAAAVMVFGGFCVLTGILFRPACLFLFLVMVVAAAMHFRHGDGLKIASHAIEDGIVFLGFMFIGPGRYVLGHF
>CP019384.1|QAT17101.1|1060399_1061686_-|homoserine-dehydrogenase
MKRISVGVIGLGTIGSGVVKALRDKRGLIAERSGVDMHLAMACDVRRSRGAQLGLPPSLFTINPQDIIKNEKIDCVVELIGGQHPARELILQALKHKKHVVTANKALLASDIEDILSVAAKSGRQLKFEASVCGGIPIIKALKEGLVANRIDSLYGIINGTSNYLLSKMSQESLSFAEALSLAKKKGYAERQSRLDIEGIDAAHKLVILCYLLFSKLVPLDAVIREGISGISEMDVRYAGEMGLVIKPMAIAKKDHESLEARVHPTLLPKSHPLAVVNGVFNAILLKGDMVGDMLFYGRGAGQSATTSAVISDIVDLGRDALEEGRRKAKAAARVSRIRRVDEIQSRYYLRFMAIDKPGILARISGVLGKNHIGIAQVSQKERKRAKFVPVVMITHNVLEKNLRKALENIDRLAIVKGKTVKIHMEGF
>CP019384.1|QAT17100.1|1059317_1060391_-|threonine-synthase
MAYQGLIQKYREFLPVTDRTPVVSLLEGDTPLIYSVVLSRATGCRVFLKYEGLNPTGSFKDRGMTMAISKAKEEGSEVVICASTGNTSASAAAYAARAGMKCVVLIPEGAIAMGKLAQALIHGAKVLAIKGNFDDALRLVREIASKYPITLVNSVNPYRIEGQKTGSFEICDDLGEAPAYHAIPVGNAGNITAYWKGYKEYHAKGKTATLPKMLGFQASGAAPIVKGKPVKHPKTIATAIKIGDPASWKQAVAARDESGGLIDTVTDREILSAYKLLAGKEGVFVEPASAASVAGILKLSRSGYFRQEGVTGREAAVVCILTGHGLKDPDRAIASIKKPKVLKADLKAILKEMGFSR
>CP019384.1|QAT17099.1|1058673_1059321_-|phosphopantothenoylcysteine-decarboxylase-/-Phosphopantothenoylcysteine-synthetase
MKGHALAGKKILITAGPTWVPIDDVRVISNTSSGEMGTLLAKEAQACGMDVDVILGPVTYRDPLKGVRVERFKYFDELLRHVSATLARRQYDIILHAAAVSDYLLKPVPGKISSANPQLILRLTSAPKLIDVMRRLNPKAFLVMFKLEGKVTDAVLLKRSLEAMKKASADLVIANRFEGGHYRGFILGSKNILAKSASKQALAASLFKILKEKMA
>CP019384.1|QAT17098.1|1057290_1058484_-|cofactor-independent-phosphoglycerate-mutase
MKYIVLVPDGMADYPVEKLGGKTPLEVAETPNMDYVVKNGLLAQVTTIPDRMAPASDVANLSIIGYDPREFYSGRAPLEAAHLGVDLTAQDVAFRCNLVTIADEKMADYSAGHISTHEASVLIQELNRGLGSDAVRFYPGVSYRHLAVLRGYPVEELSRCLCAPPHDILGEPIRRHIPKGKGAQVLLELMEKSKDVLSRHEINRVRLDLHENPANMIWLWGQGQKSQMPLFRQKYGVTGAVISAVDLIKGIGKLIGLEVINVEGATGYYDTNYTGKAEAGLKALERLDFVFIHVEATDEAGHNGDLRNKIACIERFDKLVVGTILDHFKSSGNGWRLMVLPDHATPVELRKHVADRVCMTMMGQGIAKNGFERFTEEEARKSEVHFEGHQLMEVFLK
>CP019384.1|QAT17097.1|1055686_1057294_-|carbon-starvation-protein-A
MSSLVVLLGCLAVFALGYFVYGGRIAGLFPIDPRRETPAVKKFDGVDYVPAKNWLVLFGHHFSSIAGAGPIIGPVIGCIWWGWFPSVVWIVLGTVLVGGVHDFAALMISVREEGASVAEVSATVVSRKARLIFSVFVWLTLILVIAVFADLCAKTFIAEKKIVLSSLGLIPVAILTGYLMYVRKANLTFSTVLGLLFLAGLLFLGKYVPIDVGGQAYVVWLIVLLVYCFAASVTPVNILLQPRDYLCSFLLLFGAGMGLLGLVVSRPVITQPAFISWQTSQGALWPMMCVTIACGAISGFHAIIASGTTSKQLASERHGRKIGYGAMVAEGLVALIAVLAVVSGIPGKTQQDLCLLFKDQGPICLFGTGYTGLTRVFFGDYGLYIAVMILNAFILTTLDTATRVCRYITQELTGLSNRFVSTLIVVAVAGILAFSGAWSRIWPIFGASNQLVAALALFVASLWFLMKKKPTGYTLVPAIFMFLTTVAALGIQYLSYLRSGQYLLAGLSVVLLILALVMVGEVYRAFFRNKRGQKR
>CP019384.1|QAT17096.1|1054469_1055690_-|aspartate-kinase
MKVLVQKFGGSSVANVDRIKNVARRVVSYRAKGWKLVVVVSALGDTTDELIELAGQITSEPPAREMDMLLSTGEQISCSLLAMAIEELGYDAISFTGGQVGIVTDKTHTKAKIVDISAGRIRRALQEGKIVIVAGFQGVTQDQDITTLGRGGSDLTAVALAKAIGAKTCEIYTDVEGVYTTDPRIVPEARKLKQITYDEMLEMASLGAQVMQARSIEVAKKFDIPIHVRSSFNAAEGTLILKEADKMEDFVISGVTLNKNEAKVTVCDVPDKPGIAAKLFRELSREGINVDTIVQNVSRTGFTDVSFTVSLADLAKTKKVMEKFASKIHAGKVLEDKDIARVSIVGVGMKTHSGVAAGMFEALAQKKINIGMITTSEISISCIIRKKDAEKAVRSIHAKFGLGKQA
>CP019384.1|QAT18020.1|1052874_1054455_-|citramalate-synthase
MKKIELYDTTLRDGSQTEGISYSVADKIKIARKLDELGVAYIEGGFPGSNPKDRMFFEEFKKHPLKNAALTAFGATRKAGVAAKDDPVFAAILHSGVRVATIFGKSWDLHVRDVLRVSLEENLEIIRDSVKYLVAEGLELIYDAEHFFDAYKHNRDYAMATLLAAQDCGARLLCLCDTNGGTLTSQLVAVIADVQKNVKLPLGIHVHNDLGLAVANSIAAVEAGCVQVQGTINGYGERCGNADLIPIVGILKLKMGLDCVTDEQLKELTEVSHFVSEISNMKQADNQPFVGKSAFAHKAGVHINAVYKNPKSYEHIEPERVGNVRRILVSELAGKTPILTKAEELKLQLKKDSPDTKRVVKLLQDLEHEGYQFEAADASFEILVKRALKQYKKFFELEGFRVIVEKRQKGTITSEATIKLKVGGVQEHTSSDGDGPVNALDNALRKALKGFYPVVSKMHLSDFKVRVLDAKDGTAAKVRVLIQSQDERDSWTTVGVSENIIEASWLALVDSIEYKLLKDGAVLPHE
>CP019384.1|QAT17095.1|1050092_1052882_-|valine--tRNA-ligase
MNDLPRELSAQYNPKEVEEKWAGLWARMPLFHASVNPDKEHFTIVIPPPNVTGILHMGHALNNTLQDILIRMRRMQGCEALWMPGTDHAGIATQNVVERQIAKEGLTRGQMGREKFLEKVWEWKENYGSTIINQLKRLGATCDWQRERFTMDEGYSRAITEVFVSLYEKDLIYQGDYIINWCPRCQTALSDEEAPHHDLDGKLYYIKYPLKEPQAAGRKSKRNSKKTAAPEDGIIVATTRPETMLGDTAVAVNPKDKRYKHLIGATLVLPLVGREIGIIADDLVDKSFGTGAVKVTPAHDPNDYQMGKTHELEFINIMQPDAVLNAHAGDYAGMDRFEAREAIIEDLTERKLLVKIEPHRHAVGHCYRCHTIVEPYLSKQWFVRTKPLAKPAIDAVKKGKIAFTPQRWTKVYLNWMENIKDWCISRQIWWGHRLPVYYCQRCMAETGSKSQVPISNFKKNSKNTQKGIIVARVRPEKCPDCGGTDLKQDEDVLDTWFSSWLWPFATFGWPFSDQVSEDAKRRTEEQKKELEYFYPTSVLVTAPEIIFFWVARMIMAGFAFMGSIPFKDVFIHGTVRDAQGRKMSKSLGNSIDPLEVIETYGADALRFSLISACASDIFLSKEKFEQGRNFANKIWNASRFIRMNAAVGVDGSRIDPAACRIQDLWILAELNDTIRRVTKAVDAFRFHEAVNLLYTFFWHSFCDWYVEMAKQTICEKNTQEILVHVLKVSLLLLHPFMPFITDEISSVLGGSSFETIAVAPWPQPEKKFENKEARELMRIIFDAVLLLRERRHELKLNPAVKVRVRMWAAPKKRAALLAAAPVICQLAQASELEWLDDDTAPQNSLSLLVARDAHLYLLLEGLVDIAQERERLAGEIAQGHKQIKAKEALLKNKGFVKKAPEQVVAAERKRLEELKAKTADLEEIRRALQ
>CP019384.1|QAT18021.1|1049215_1050076_-|nicotinate-nucleotide-diphosphorylase-(carboxylating)
MIKAALLEDAAYQDITTLDFIPFSARVTARIIAREKGVVCGAALAAEVFRVFDPSLSVRLLKTDGYVVRAGETLMTVTGKARSVLSCERLALNFLGYLSGIATQTRQACDAVRRAGVRILDTRKTTPLMRSLEKYAVCAGGGMNHRLNLADQYLVKDNHILILKSIGGFDIFARRRKKVLFEIEVENLSELKKAMVYRPDIVMLDNFSPLQVRRAVALLKKIFPDKEHRPLVELSGGIGPQNIRGYAIKGVDFISLGALTHSARALDVSLEIVKVRFKRRLLSREG
>CP019384.1|QAT17103.1|1062705_1062933_-|hypothetical-protein
MNRAGLKFSAEGGSVLAWLTPDQAEVAHLRFFSIYDIGSPAPREEVRGMGFPVRKNVRGVAQFGSALVTNPNIKI
>CP019384.1|QAT17104.1|1063287_1064289_-|glycerol-3-phosphate-dehydrogenase-[NAD(P)+]
MKKNGKIVVLGDGGWGTTLSVLLCRKGFPVTLWSPFKDYALYLARYRTNPRYLQGIPIPRSLNITADISCLEGAGLVVAAVPSKYLRNVLMRGRDFVAPLTPVVSVIKGIEDHTLMRMTEVIREVWASKRIVVLSGPTIAQEVARGIPSTAVVSSSDAEGMRKAQDLFMSPAFRIYTNPDTVGVELGGSLKNVIAIACGISDGLGFGTNAKAAIVARGLAEISRLGAAMGAKRDTFAGIAGLGDLVTTCFNPLSRNHSVGERIGKGESVKHILASMKMVAEGVLTTKSACGLARKFGVSMPISQEIYNVLFKHTHPRTAVRNLMERKKKSEGA
>CP019384.1|QAT17105.1|1064420_1066469_-|hypothetical-protein
MEQPTLLFDKALIFRHIPLFSGLNPFERRMVFDALEIADYKSGETIYRQGDPPDAFYCIISGRVEVFVEKAGHPETLEHIHRGKYFGFISLLTGEPHSVSARAVNDTVMARIPADKFKAILHRIPRLAIDLSRMLSRRLKRRDLHPKSIFESTIVSFFGDALTKNDTALYALNLAIGLKEQTAKKVVLVDFSGGDSLIRGVLGLGPSASILPKDLVYHPTRIFEFVLHSQAGIDVLFVEAKAAGTTDVAAFISLATTLVNDYHFCLVHLPCDFGPQAFKILAQSDAVHLVMAPHADALRKMSRLLDMTGLSCDSSFRKKMRLLIVEGKEAHSKGRQLSVCMEESVFHLPVYATLPPQDMDRPFLVSGHPLDPYSRVIRRVARQMGEVLVGLALGSGSAMGLAHIGIMQVIEEEGIPVDMVSGSSIGAMFGAFWAAGYSAGEIQTIVLKNNKKSYLFGFDDLMMPLRGLIRGGHVRSFLKRYLGDKTFYDLKMPFRVVACDCRSMRQVVFDSGRLVDAIMASISIPGVFAPHAVAGRFYIDGGIINPLPTDVLVEAGAKKIVAVNVLPSPEEIERTYDLLQKKRVRPDFNKQGLWRYPWFYFRDRFHEWLDPNIFGIIVSTVQSMEYLLAQVSSLGQSDVVLHPDMTGISWSCFEHAEELISRGRQEARRCLPQIRSLVLRTE
>CP019384.1|QAT17106.1|1066568_1067321_-|thymidylate-synthase
MPTEQFLSPVFVDAFDLDDAWFQTLSAILDKGRVYTITRGSYKGSKRLEFDFVVVRVRKPSHQIIPIIPEGLNIPAPTDMDYIQGYLSYLLTGAKTETEDYTYGERLVDPKVRFAEDKDGRQMVRELPLHVNQIDEVIRMYRQEGFGTNQAVMEIGMPSDIKLQDPPCLRLIDTKVRDRKLHFFLYFRSWDLWGGFPSNLGGLQLVKQYMAEMIGVEDGEIVAASKGLHLYDYSWEVAKIRTKKTDRVIA
>CP019384.1|QAT17107.1|1067337_1067715_-|response-regulator
MDKQKLLIVDDEPDVLKLLGERLAKAGYEVIKASCGKEAVALAQKKTPDLIILDIAMPGMDGSEVAGILRKDAKTKDIPILFLTCLYTKREEQTEGHELGHNFFLAKPYDPKELLEEIHRLIGPR
>CP019384.1|QAT17108.1|1067719_1068109_-|hypothetical-protein
MAEDKKTILIIDDEVGLRNLLKFRLVSFGFDVIVAEDGYTGIEMAKSMKPDLIILDIMMPYFNGIEVCKKLKSDYATKGIPVVFLSVLAQKEDIEMGKQAGGEFFLTKPYDPEKLNFVLRMALNKKEEE
>CP019384.1|QAT17109.1|1068112_1072588_-|transmembrane-receptor-with-multiple-PAS-sensor-domains-and-histidine-kinase-domain
MQLFFLQNLDYLYFFYGAAFFLLASAGFIFYIRERSHHALTLNWLFFVFFALLRALNKWLDLLAISNADPSLFNSLRLILLVASFVFLMEFSRSSYVLLSGKQINKWLYILPFGVFVLGLFFIRNASILNGFITVTLRGPATFAAGAVFLLYSSRQERASSRWSYRFIGIAFFFYCLPLAPLQIATLPALSASQPSFYYAFLVPAAFQRALGAMLVAFLLIHQATRYVLDLPSRNVRGRRRQVLMYSFLFFYLVFFAGGFMLMGSVDKFEKKHLKQLVLTDARNLADIIGTLDVRQFIAEEDVSVYKKYLKMHNRMSDLPELSLYTKALYLILPGKDRFSFAVGSSPQVFPHEVVPSFGAQIPQKAIADSFYSKKPTLVGPYLGNDGRPAYTVFFPVLDKDDQALALLGVDIDVAKLQGEVYRVRLFVIGICFSFLILLVVGYAFLIIFALKGLELQIQKDNLDKALVSLREAQRELARSEETFRGILNNSPNAIFGFDRDLRLIFWNQGAEKLYGYRKADVIDERNPLRSRKVTDVLGVVSLESEIMEVFEGHTLIRELAQKNMDGEELDVALTVFPVKDPQGHILFVLGLAQDITTHKRYEERLADAHARLRSFLDGASQISMCATNLSGAFQMWNDGAQELFGYTASEILGKTPLVLHDPADLRLFEEEFCRKTGKDLHGFEVITEVVRQGGVLQREWIMVKKDGTRFPVDLTIAGIRNDKGELVGFLGIGIDKSGIRRIEKELLETQEKYRDLVESLNVGVYINTPGPDGRFFEANPALLKIFETDSVENISVKTLYADPAERKRFSDMLLKNGFVKNYEFRGKTLKGRLFWASVTAVVKHDERYGEVFYGIIQDVTEQKHLEASLSEERGRLKTIADSIGAGLSLIDKNFNIVWVNQVMEKWFGKLGTIQGRKCFEVYQLRDSVCLTCPSRRAMETGQVQTGEERSVFPDGRVIDFLLICTPVKNERGEVEQVLELTLDMTERKSMVEMLEFERALSRNVIDSISDSLIVLDCNTKVVLDVNRYFMEQAGMRKEDVIGKPCSEVYRHVCSACEACSFEEVAKHGRTIESTHIHKMRDGREAYVDVTLSPLKDEKGRIIGVIHISHDVTDRKRLEDELKRYSHDLENLIEERTRALQVSELMFRNLFESAQDGILIIDASSGNIISANPYLLHILECTRDQLMGLHYNAVPFFRESQVYDRAFLALKEQMSVLYDDVRLKTCTGREIEAEFRASTYFVEKRKIIQCNIRDITERKKIEKIKTEFVSMVSHELRTPLSAIKEGVEIVADGTQGKINRNQKECLQIALSNINRLNRLIGDILDISKIQSNLLKVHMSPCNICEVIDQVYSLVRIEIEKRGLVFVTDCQKDLPSAMADKDRLIQVLMNLLNNAIKFTRERSRIVLAVRQVHDSVEFSIKDEGVGIPQEEIARLFGKFVQLDSTLVRRVGGTGLGLYISRNLVEAMGGRIWVESTLGEGSTFKFTLPITRG
>CP019384.1|QAT17110.1|1074198_1074573_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MFFLLKQRGFHVLVPWGEDHRFDMVAEKNGIYKKVQVKYVSAKNGILEIPLRSCNNHKVIHYSPLDVDIIAAYHDAARKVYFVPLKNISNRSSFKIRLIPARNNQQEKIVPASRYEARFDFFDK
>CP019384.1|QAT17111.1|1074613_1075465_-|NAD(P)H-hydrate-dehydratase
MLWPALFFDRKKQTHKGDYGHVLIVAGSRSYTGAALLCSGAAMRSGAGYVTLAFPESLQGVIACGVREVVTLPLRSTAQQSVSERALPQLVPVLKKSDCLLVGCGMSRHPSTQALIRSLVRRASTPVVVDADGLNAMAGHLGILRGLKHPVVLTPHPGEMERLCGRRIVAAPAARKEVAKDFSLRYNVTLILKGPRSVVCSSRGRLYENTTGNPGLATAGSGDVLSGIVAAFLGQGMEPFEAACRAVYIHGLAADLAAKEKTQPGMIASDVIDYLPKAFKRCR
>CP019384.1|QAT17112.1|1075439_1075778_-|holo-[acyl-carrier-protein]-synthase
MVRGSGIDIVEIKKLDRAVKRWGDVFLKRVYTAKELAYSRSKRHPLQHLAARFAAKEAIFKALGNSPKLNFRDIEIINDVNGRPFCRIKNRKTSIALSLSHTDHYAVASAIL

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Crispr_ID: CP019384_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP019384_3

1625552-1625657

Orphan

Consensus_repeat	Method
ATTAATTTGTTTAAGGAAACAGGCGACGATGGAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP019384_3

>merge|CP019384|3|1625552-1625657|CRISPRCasFinder
ATTAATTTGTTTAAGGAAACAGGCGACGATGGAAGTCCTGACAAAATTAAGGATCACGCTTCTTTTGCCGAATTAATTTGTTTAAGGAAACAGGCGACGATGGAAG

>CP019384|3|3|1625552-1625657|CRISPRCasFinder
ATTAATTTGTTTAAGGAAACAGGCGACGATGGAAG	TCCTGACAAAATTAAGGATCACGCTTCTTTTGCCGA
ATTAATTTGTTTAAGGAAACAGGCGACGATGGAAG

Protein	Signature genes	Signature genes Name	Protein_function
CP019384.1\|QAT17597.1\|1619060_1619240_-\|hypothetical-protein	unknown	unknown	unknown
CP019384.1\|QAT17601.1\|1621031_1621247_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379097
CP019384.1\|QAT17614.1\|1632889_1634320_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|164795
CP019384.1\|QAT17617.1\|1636523_1636943_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|381116
CP019384.1\|QAT17613.1\|1632287_1632863_-\|hypothetical-protein	unknown	unknown	unknown
CP019384.1\|QAT17616.1\|1635650_1636379_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224108
CP019384.1\|QAT17611.1\|1630322_1630877_-\|hypothetical-protein	unknown	unknown	unknown
CP019384.1\|QAT17600.1\|1620191_1620749_-\|RNA-polymerase-sigma-factor-RpoE	unknown	unknown	gnl\|CDD\|236608
CP019384.1\|QAT17602.1\|1621253_1622138_-\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl\|CDD\|237571
CP019384.1\|QAT17612.1\|1631067_1632288_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240291
CP019384.1\|QAT17604.1\|1623956_1624439_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366659
CP019384.1\|QAT17603.1\|1622147_1623944_-\|phosphoenolpyruvate-carboxykinase	unknown	unknown	gnl\|CDD\|235256
CP019384.1\|QAT17608.1\|1628274_1628988_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237457
CP019384.1\|QAT17598.1\|1619239_1619728_-\|expressed-secreted-protein-of-unknown-function	unknown	unknown	unknown
CP019384.1\|QAT17599.1\|1619745_1620195_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379219
CP019384.1\|QAT17610.1\|1629771_1630188_-\|nickel-responsive-regulator	unknown	unknown	gnl\|CDD\|179855
CP019384.1\|QAT17596.1\|1618795_1618978_-\|hypothetical-protein	unknown	unknown	unknown
CP019384.1\|QAT17605.1\|1624500_1624887_-\|secreted-protein-containing-peptidoglycan-binding-like-domain	unknown	unknown	gnl\|CDD\|366659
CP019384.1\|QAT17615.1\|1634358_1635654_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|100105
CP019384.1\|QAT17609.1\|1628966_1629701_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274139

Protein	Function_ID	Function_description	E-value
CP019384.1\|QAT17617.1\|1636523_1636943_-\|hypothetical-protein	gnl\|CDD\|381116	cd17574, REC_OmpR, phosphoacceptor receiver (REC) domain of OmpR family response regulators. OmpR-like proteins are one of the most widespread transcriptional regulators. OmpR family members contain REC and winged helix-turn-helix (wHTH) DNA-binding output effector domain. They are involved in the control of environmental stress tolerance (such as the oxidative, osmotic and acid stress response), motility, virulence, outer membrane biogenesis and other processes. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.83103e-27
CP019384.1\|QAT17601.1\|1621031_1621247_-\|hypothetical-protein	gnl\|CDD\|379097	pfam13275, S4_2, S4 domain. The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4.	6.02127e-18
CP019384.1\|QAT17614.1\|1632889_1634320_-\|hypothetical-protein	gnl\|CDD\|164795	PHA00370, III, attachment protein.	2.7554e-09
CP019384.1\|QAT17616.1\|1635650_1636379_-\|hypothetical-protein	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	8.35691e-87
CP019384.1\|QAT17615.1\|1634358_1635654_-\|hypothetical-protein	gnl\|CDD\|100105	cd01335, Radical_SAM, Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. Mechanistically, they share the transfer of a single electron from the iron-sulfur cluster to SAM, which leads to its reductive cleavage to methionine and a 5'-deoxyadenosyl radical, which, in turn, abstracts a hydrogen from the appropriately positioned carbon atom. Depending on the enzyme, SAM is consumed during this process or it is restored and reused. Radical SAM enzymes catalyze steps in metabolism, DNA repair, the biosynthesis of vitamins and coenzymes, and the biosynthesis of many antibiotics. Examples are biotin synthase (BioB), lipoyl synthase (LipA), pyruvate formate-lyase (PFL), coproporphyrinogen oxidase (HemN), lysine 2,3-aminomutase (LAM), anaerobic ribonucleotide reductase (ARR), and MoaA, an enzyme of the biosynthesis of molybdopterin.	2.74022e-17
CP019384.1\|QAT17600.1\|1620191_1620749_-\|RNA-polymerase-sigma-factor-RpoE	gnl\|CDD\|236608	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional.	1.27739e-45
CP019384.1\|QAT17602.1\|1621253_1622138_-\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl\|CDD\|237571	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional.	3.1947e-173
CP019384.1\|QAT17599.1\|1619745_1620195_-\|hypothetical-protein	gnl\|CDD\|379219	pfam13490, zf-HC2, Putative zinc-finger. This is a putative zinc-finger found in some anti-sigma factor proteins.	4.15365e-05
CP019384.1\|QAT17604.1\|1623956_1624439_-\|hypothetical-protein	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	3.12891e-20
CP019384.1\|QAT17603.1\|1622147_1623944_-\|phosphoenolpyruvate-carboxykinase	gnl\|CDD\|235256	PRK04210, PRK04210, phosphoenolpyruvate carboxykinase (GTP).	0
CP019384.1\|QAT17608.1\|1628274_1628988_-\|hypothetical-protein	gnl\|CDD\|237457	PRK13647, cbiO, cobalt transporter ATP-binding subunit; Provisional.	2.75049e-91
CP019384.1\|QAT17612.1\|1631067_1632288_-\|hypothetical-protein	gnl\|CDD\|240291	PTZ00146, PTZ00146, fibrillarin; Provisional.	1.47345e-07
CP019384.1\|QAT17610.1\|1629771_1630188_-\|nickel-responsive-regulator	gnl\|CDD\|179855	PRK04460, PRK04460, nickel-responsive transcriptional regulator NikR.	5.09438e-56
CP019384.1\|QAT17605.1\|1624500_1624887_-\|secreted-protein-containing-peptidoglycan-binding-like-domain	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	1.77466e-19
CP019384.1\|QAT17609.1\|1628966_1629701_-\|hypothetical-protein	gnl\|CDD\|274139	TIGR02454, Uncharacterized_protein_MJ1089, cobalt ECF transporter T component CbiQ. This model represents the CbiQ component of the cobalt-specific ECF-type. CbiQ is now recognized as the T component of energy-coupling factor (ECF)-type transporters. The S component confers specificity (CbiM-N for cobalt systems), which CbiO is the ABC-family ATPase. In general, proteins found by this model reside next to the other putative subunits of the complex, identified as CbiN, CbiO, or CbiM. Note that the designation of cobalt transporter has been spread excessively among ECF system transporters with many other specificities. [Transport and binding proteins, Cations and iron carrying compounds].	1.52005e-25

>CP019384.1|QAT17605.1|1624500_1624887_-|secreted-protein-containing-peptidoglycan-binding-like-domain
MNRMWMGVGVLAAALTVAGCATTKSGSASLENRVQVLESKVQTLEGPVMTSEAPVSFEKESSGATAATMTKKQIQQALKNAGYYDGKIDGKIGPKTTAAIKQFQKDLGLKADGIAGKNTKEKLLKYLP
>CP019384.1|QAT17604.1|1623956_1624439_-|hypothetical-protein
MFSLRFACAIFVIFGFAVSGCGKDSNKKQKFAVEEGVLNLSEADNLLSGSRDEAVEIVDNGQQAQTQVAVDVPVPADAPVLEEARPSAVVLGETPDEKGIQTALKDLGFYQGEIDGKIGPKTKAAIREFQQKNGLVADGKVGPKTWAALKAALTVSRDPQ
>CP019384.1|QAT17603.1|1622147_1623944_-|phosphoenolpyruvate-carboxykinase
MPDKNQPPTKHARLKTWVSEMASLCRPDRIVWIDGSEEEKRRLEDEAVATGEIIRLNQEKLPGCLYHRTAANDVARTEHLTFICTKKKEDAGPTNNWMSPRDAYRKASDYFRGAMKGRTMYVVPFSMGPVGSPFSKIGVELTDSIYVVLNMRIMTRIGQKVLDFLGADGEFTKCLHSKADLDIGKRLILHFPEDNAIWSVGSGYGGNVLLGKKCLSLRIASYMGLREGWMAEHMLIMGIEEPNGHVEYIAAAFPSACGKTNLAMLIPPEGLKSKGYKIWTVGDDIAWMRIDSDGALWAVNPEAGFFGVAPGTNSKSNPNAMATIRKNTIFTNVLLKKDFTVWWEDGNEPPPPEGMDWRGQPWRPGMKDEHGKIIKGAHPNSRFTAPASQCPSISFRLEHHHGVPISAIVFGGRRAHLAPLVYEAFSWQHGVYVGSTMASERTAAQMGTVGEVRRDPMAMLPFCGYHMGDYFKHWLAMGKKMEKQPKIFHVNWFRLDEHGKFLWPGYSENLRILEWILDRCNNRVEAVKTPAGYVPRLQDLDLTGLNISRDALQKVLEIDRFEWLQEMESQREFLKTFGDRLPRELWAEWEAQNKRLQE
>CP019384.1|QAT17602.1|1621253_1622138_-|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MSENVLLQTNFSDLKLLRRGKVRDVYDLGDSLLIVATDRISCFDVVLGCGIPHKGEVLTKISLFWFDYLRDICENHLLTADVNAYPPQAKKYHEALRGRSMLVKKAEPLAIECIVRGYLSGSGWKEYLKTQSVCGIRLPAGLKESQKLPQTIFTPSTKADIGHDINVDEAGAARIVGKEALADVRAKAVALYEKAAAYAQTKGIIIADTKFEFGGYGGKLILIDEVLTPDSSRFWPQEGYAPGRPQPSFDKQFVRDYLETLSWDKTPPAPDVSADVIQKTSEKYLHALKVLAGL
>CP019384.1|QAT17601.1|1621031_1621247_-|hypothetical-protein
MEFALRGDYIELDNLLKASGIAASGAEARDLIRQGLILVNGEKESRLRRKIRKGDKVAAGRILLEIISSVV
>CP019384.1|QAT17600.1|1620191_1620749_-|RNA-polymerase-sigma-factor-RpoE
MKEDAFYIEQFLGGEEKAFEAIVRKYQNRVLNIVFSLIGKDRESEDIAQEAFLKAYRGLKGFRRRCSFSTWLYRIVLNTTYDFLRKRRDVVTEEEALGQSVDARGGHNDVLFVLLMKERDVLIQKALGKVPLAYRSAVVLKDIEGLSYAEISKILSCRIGTVESRIYRARQLLKKELMKFGGDVI
>CP019384.1|QAT17599.1|1619745_1620195_-|hypothetical-protein
MNACARTRRLLSRYIDKEAAKRDAAFIETHVAGCFSCRKELRELSCVREVLLKKERRTLPEGELARRLLREVLRRRSGQEDSSPGGMGYFARRLIFLPAIGIALSAAFLILVPQQTNRYSWEEHILSGAPTTTAMTLGLLLGARVNSTP
>CP019384.1|QAT17598.1|1619239_1619728_-|expressed-secreted-protein-of-unknown-function
MNRNAVYLAVFAVLCVLAGVLAGAGIVRKAVCPEFGPPGRPDFAARAEHFMRRGPGGGVGPGSPVEMLADRLDLSKEQKADVEKILEESRQEVEKLGEDVRYTIDKIKNEGDERIMKILDPGQQERFMELLEEIHGSGRPGEGQGPMGEYGPPPSEDLPSRR
>CP019384.1|QAT17597.1|1619060_1619240_-|hypothetical-protein
MGMSSLLPQPGFREEDCFFIEFKKRKDGFDENAGVCLGPEDSDVFDFMFFVMFGGERLW
>CP019384.1|QAT17596.1|1618795_1618978_-|hypothetical-protein
MKAPPQEAIDACSGKAEGDTCQCRGPRGEEETGICVSTPDKKYFVCRPDRASRGPQDEQD
>CP019384.1|QAT17608.1|1628274_1628988_-|hypothetical-protein
MSYAVEIEHLYFSYPDGTQVLKDLSVAISEDDSVGLIGPNGAGKTTLLLHLNGILRGEGKIKVFSREICDETLARVRRDVGLVFQDPDTQLFMPTVFDDVAFGPLNMGLPQDEIGRRVHRTLGAVDMEASAERPSHHLSFGEKKRVSVATVLAMAPRLLVLDEPTSNLDPGHRQQLMEILRGVSMTKLIASHDLEMIRVLTRQVILLSGGRIVAYGPTREILSDHQLLKSNGFFLLS
>CP019384.1|QAT17609.1|1628966_1629701_-|hypothetical-protein
MHHNFIDAYSHTDSFLCRRDPRVKLFVFGLFILLVLLQPSTGMRGLVFYGVLLAVVFIFSHLPLRPIAGRILTLLPFVLLTGWSMRAASGGLAVTVIKAVEAMVAVFLMVSTTPFPRLLKALEAMRCPSIVIRMLSFLYRYIYLILDEFMKMRQAQLSRTVGGRLSPGRQAKIFSSILGHLFVRSYEKGERVYLAMCARGYDGTVRVLAYPGFARTAAWADGAFLVISILIMGSLEALCLMPWK
>CP019384.1|QAT17610.1|1629771_1630188_-|nickel-responsive-regulator
MSKLSRFGVSMEEEFLGRFDAYMRRKGYKNRSEAIRDLIRGVFVAQEWQANERVAGALLVVYDHHRRDLVENLLGIQHGAQEHIVSTQHIHLDHHNCLEIIVVRGRARRIQDLYDRIQALKGIKHTSLSMATTGSKIL
>CP019384.1|QAT17611.1|1630322_1630877_-|hypothetical-protein
MIFTVAVVAAAVFQGDTMADQDFSYQSSFCTLRYPKGWTLRESKGKTEAYTQVHVFGERNKDLGFGPSITLTVYPKKDKGGVYASAQALADHAVQAAHGLSSFKLESRSTVKLPFGIDALRCVMTYVLRLPIYQVNAKDVLLKEETYYFEKGDDIYVLSYKNTDVDFAAQESLFLDTLESFKLS
>CP019384.1|QAT17612.1|1631067_1632288_-|hypothetical-protein
MNSPASKAREVERFLRGRRGQGVLEFVLMFTVLAITVVFSAFHIFKPSVTKMYADAGTKMNDSGGLIAEDVGQPLNMFDDETGAASGGGFAGNSGGSSGGFSGPGGFGSGSSSGGGTGGGGGGGGAGTGGGIGATGGSGGGSDAGAGGSFPGSGGGAEGVGRSFPQTPLAIGNDSFLSLSWEAATGTPVSYNIYRATAPGGPYEFFVEGWTATWFTDVWTTNGSTYYYRVDAVYDDGAVVSSGVFSGTPSADSVYAVAAAEALTKLDESSNGSALADIIDLYDVKIGFGTGVSDAVGWYSSYFNTIIVDLSQFGLSQGVQTSILAHEGTHAWWTNDTSQGQPERGTNLGDSIDQEYNAFLNGAAVWNEIKDGDTDANQDGWASVVALDEASAKEIIRTAYPDLPEY
>CP019384.1|QAT17613.1|1632287_1632863_-|hypothetical-protein
MKLKSIAVVLFFLVCGVLLVILFLPRMEGVSYQSSFCTLRYPKGWTLRESKGKTEAYTQVHVFGERNKDLGFGPSITLTVYPKKDKGGVYASAQALADHAVQAAHGLSSFKLESRSTVKLPFGIDALRCVMTYVLRLPIYQVNAKDVLLKEETYYFEKGDDIYVLSYKNIAKDFTPNLASFRMIKKSIRIK
>CP019384.1|QAT17614.1|1632889_1634320_-|hypothetical-protein
MNNLCRMSRRLKDCAARLHFAAGLDRRRFSLRAGFTLLEIVIIVVVTSVLASLAAVSYFHVTSKAQDAEALNNLAAVRKAQLSEAAAKGAFVNATNTQEINERLTEVQIEDKDFTYKIVNVTADDFAAVAERVDEEKAQEKPIVIAMYADGHVGYTYASGSSSGGSSSYGGGGGSSGGGSSGGSSGGSLGGSSGSSGSSGSGSSGGSSSTGSSGDGSSGGSTGGGTVAAMGFTYPPVATGNDGFVTIGWAGIGIYPDSYDIYRSTSAAGEFELLYENWYGTTDYYTDLTVTNDTTYYYRIDAHYGEQATYSSEIFSATPSATSQYALQAAEALLELATSPTGATIAEIILLYDVKVGFGNCDNSVAAWYEPLFNTIRINLDEFSSTAEVQAAILAHEGTHAWWTNDINQGQPERGENLGDSIDQEYNAFLNGATVWGDIKGGQTDYNQDSWASVIAQGEADAKEVIRLYYPDLPEY
>CP019384.1|QAT17615.1|1634358_1635654_-|hypothetical-protein
MTGSALSRAPRMVFCDAKGDVFVHPSLKALGFDGQGFVLPAQEEWISLPAGSSFFYLPGHRAFGFDPLAGKAAVLEEIQGRGVYPAAGFMVPGYTRFYLPAARKTDPRLTLPLWPYTAVGYAQGKFVAAAVRIDAGRKQRPSCYADRPSIVNGMRRLSRQYPSNRLLKHLRHCALQYNCRNAQNLFLGRWEAPLPVSPLCNSRCLGCLSAQDTDCSSSHSRIRFVPSAGEVAEIAIHHLKHARAPIVSFGQGCEGEPLLEVDVLKEAIIRMRRATKRGTIHLNSNGCDAARIRALAACGLDSVRISINSFHPRLYGAYYRPRGYAFSDVIASIKEAKSNGLFVSLNYLTFPGFTDDADDVARLVSFLKKGNADLLQLRNLCIDPEVFSEKMALVNGRPVGILRMIRRIRQEVPRLRLGYFNLPKENFRPSL
>CP019384.1|QAT17616.1|1635650_1636379_-|hypothetical-protein
MRLQVFLSHAGICSRRKALEPILAGRVTVNGKQITEPSFDVRPSSDKVCFDSRPVHLPQKIYLLLHKPQATISTVSDPHASKTVLELIPQHLRSGLHPVGRLDKDTTGLLLLTNDGELTHKMSHPSYEVEKVYRVVLNKEAGDGDIRRISQGILLEGQKTLPCRIVKRGPMELEMAIHEGRKRQIRKVFALFHYHVERLKRIRQGGLELGSLKEGEWRFLTPQEVARIMQEIRKTPKGKKKK
>CP019384.1|QAT17617.1|1636523_1636943_-|hypothetical-protein
MMPMMDQEEGGGSKIKSILIIDDEKDILDSLSGYLERNGYDVEAADNGAEGLRLVRDRRPDLVILDLMLPDIDGSDIAARLLEDPLTSRIPIIFLTSIVRKSEQLKPRRVTKRCVVAKPCSPAEILGRVRSIIGPPRVS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP019384_3	3.1\|1625587\|36\|CP019384\|CRISPRCasFinder	1625587-1625622	36	CP019384.1	833738-833773	1	0.972

1. spacer 3.1|1625587|36|CP019384|CRISPRCasFinder matches to position: 833738-833773, mismatch: 1, identity: 0.972

tcctgacaaaattaaggatcacgcttcttttgccga	CRISPR spacer
tcctgacaaaattaagggtcacgcttcttttgccga	Protospacer
*****************.******************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

322420 : 330188

uncultured_marine_virus(16.67%)

protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAT16413.1\|322420_323434_+	D-beta-D-heptose 7-phosphate kinase	A0A0F7L837	uncultured_marine_virus	6.0e-11	26.5
QAT16414.1\|323513_324263_+	3-deoxy-D-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
QAT16415.1\|324369_325212_+	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	1.3e-54	43.0
QAT16416.1\|325221_326181_+	arabinose 5-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	1.0e-39	33.3
QAT16417.1\|326334_326919_+	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase	A0A222YVZ6	Synechococcus_phage	4.4e-06	27.9
QAT16418.1\|326918_327827_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
QAT16419.1\|327813_328536_+	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.6e-24	28.5
QAT16420.1\|328568_329438_+	cell division trigger factor	NA	NA	NA	NA
QAT16421.1\|329603_330188_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	1.8e-52	54.7

DBSCAN-SWA_2

435380 : 442616

uncultured_Caudovirales_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAT16512.1\|435380_436457_+	N-acetylmuramoyl-L-alanine amidase	A0A2H4JCM7	uncultured_Caudovirales_phage	9.9e-20	32.5
QAT16513.1\|436749_437547_+	glutamate racemase	NA	NA	NA	NA
QAT16514.1\|437558_437930_+	6-carboxytetrahydropterin synthase QueD	A0A088FAL2	Vibrio_phage	8.1e-06	41.8
QAT16515.1\|437926_438586_+	7-cyano-7-deazaguanine synthase QueC	M1PKZ7	Cellulophaga_phage	4.3e-26	32.4
QAT16516.1\|438582_439254_+	queuosine Biosynthesis QueE Radical SAM	J9PV61	Bacillus_phage	6.6e-14	26.3
QAT16517.1\|439283_439676_+	NADPH-dependent 7-cyano-7-deazaguanine reductaseQueF	A0A1V0DYD3	Dinoroseobacter_phage	2.9e-14	47.5
QAT16518.1\|439672_440512_+	fumarate hydratase	NA	NA	NA	NA
QAT16519.1\|440735_441278_+	fumarate hydratase	NA	NA	NA	NA
QAT16520.1\|441274_441991_+	ribonuclease PH	NA	NA	NA	NA
QAT17981.1\|442010_442616_+	non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family	E5DUE6	Cassava_brown_streak_virus	2.4e-07	29.3

DBSCAN-SWA_3

1003993 : 1012877

Klosneuvirus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAT17058.1\|1003993_1004512_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	2.5e-29	47.7
QAT17059.1\|1004698_1005550_-	DNA-binding transcriptional regulator, LacI/PurR family	NA	NA	NA	NA
QAT17060.1\|1005550_1006369_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	3.1e-34	33.5
QAT17061.1\|1006467_1009224_-	pyruvate phosphate dikinase	A0A2D2W2B1	Stenotrophomonas_phage	3.7e-71	37.1
QAT17062.1\|1009293_1010847_-\|tRNA	glycine--tRNA ligase	A0A2I2L3K8	Orpheovirus	8.9e-46	27.8
QAT17063.1\|1011034_1011889_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	1.1e-53	42.0
QAT17064.1\|1012037_1012877_-	hypothetical protein	A0A1V0SIV0	Klosneuvirus	4.8e-22	32.3

DBSCAN-SWA_4

1031346 : 1041237

Klosneuvirus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAT17083.1\|1031346_1032753_-\|tRNA	aspartyl-tRNA synthetase	A0A1V0SJ84	Klosneuvirus	3.1e-21	24.8
QAT17084.1\|1032746_1034000_-\|tRNA	histidyl-tRNA synthetase	A0A2I2L577	Orpheovirus	3.2e-22	24.7
QAT17085.1\|1034078_1034282_-	cold-shock protein	Q9AZD3	Lactococcus_phage	2.8e-16	58.1
QAT17086.1\|1034470_1034749_-	DNA-binding protein similar to integration host factor beta subunit	NA	NA	NA	NA
QAT17087.1\|1034808_1038246_-	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	3.2e-229	38.3
QAT18018.1\|1038403_1039960_-	GMP synthase (glutamine amidotransferase II)	A0A1V0SH76	Hokovirus	3.8e-20	33.7
QAT17088.1\|1040076_1041237_-	inosine 5-monophosphate dehydrogenase	A0A1V0SHK8	Klosneuvirus	4.3e-13	38.7

DBSCAN-SWA_5

1536387 : 1548591

Bacillus_phage(12.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAT17516.1\|1536387_1536843_-	cytidine deaminase	A7KUY9	Bacillus_phage	2.4e-23	41.2
QAT17517.1\|1536842_1538123_-	serine hydroxymethyltransferase	G9I092	Helicoverpa_zea_nudivirus	4.2e-94	46.7
QAT17518.1\|1538209_1538674_-	ribose 5-phosphate isomerase B	NA	NA	NA	NA
QAT17519.1\|1538670_1539732_-	threonylcarbamoyl-AMP synthase	S4VW33	Pandoravirus	5.7e-28	41.8
QAT17520.1\|1539728_1540217_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	2.9e-19	43.1
QAT17521.1\|1540268_1541552_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
QAT17522.1\|1541604_1542615_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	2.4e-60	42.8
QAT17523.1\|1542618_1544046_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	8.4e-51	31.5
QAT17524.1\|1544055_1544829_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA
QAT18063.1\|1544978_1545620_-	Rossman fold protein, TIGR00730 family	A0A1D8KUT5	Synechococcus_phage	8.2e-22	35.1
QAT17525.1\|1545675_1548591_-	phosphoribosylformylglycinamidine synthase II	A6N228	Microbacterium_phage	3.3e-94	32.6

DBSCAN-SWA_6

1863341 : 1892807

uncultured_Mediterranean_phage(11.11%)

portal,tail,terminase,protease,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAT17828.1\|1863341_1866959_-\|tail	phage tail fiber protein	K7YBH6	uncultured_Mediterranean_phage	8.1e-50	24.1
QAT17829.1\|1866942_1867425_-	hypothetical protein	NA	NA	NA	NA
QAT17830.1\|1867349_1867961_-\|tail	phage minor tail protein	D6PGV4	uncultured_phage	2.6e-09	26.5
QAT17831.1\|1867930_1868299_-	hypothetical protein	NA	NA	NA	NA
QAT17832.1\|1868295_1870071_-	hypothetical protein	NA	NA	NA	NA
QAT17833.1\|1870067_1870391_-	hypothetical protein	NA	NA	NA	NA
QAT17834.1\|1870393_1870819_-	hypothetical protein	NA	NA	NA	NA
QAT17835.1\|1870833_1871979_-	hypothetical protein	NA	NA	NA	NA
QAT17836.1\|1872000_1872468_-	hypothetical protein	NA	NA	NA	NA
QAT17837.1\|1872467_1873076_-	hypothetical protein	NA	NA	NA	NA
QAT17838.1\|1873078_1873405_-	hypothetical protein	NA	NA	NA	NA
QAT17839.1\|1873479_1874436_-\|capsid	major capsid protein	F4YXT5	Roseobacter_phage	4.5e-08	23.8
QAT17840.1\|1874455_1874809_-	hypothetical protein	NA	NA	NA	NA
QAT17841.1\|1874827_1875892_-	hypothetical protein	NA	NA	NA	NA
QAT17842.1\|1875930_1877541_-\|portal	phage portal protein	V5Q9Y6	Xylella_phage	6.8e-57	32.6
QAT17843.1\|1877537_1877753_-	hypothetical protein	NA	NA	NA	NA
QAT17844.1\|1877930_1878179_-	hypothetical protein	NA	NA	NA	NA
QAT17845.1\|1878178_1880023_-\|terminase	phage terminase, large subunit	A0A2K9V301	Faecalibacterium_phage	3.9e-101	39.3
QAT17846.1\|1879991_1880618_-	hypothetical protein	NA	NA	NA	NA
QAT17847.1\|1880610_1881915_-	DNA modification methylase	Q708N6	Streptococcus_phage	4.2e-49	31.1
QAT17848.1\|1882161_1882965_-	hypothetical protein	NA	NA	NA	NA
QAT17849.1\|1882976_1883225_-	hypothetical protein	NA	NA	NA	NA
QAT17850.1\|1883249_1883567_-	hypothetical protein	NA	NA	NA	NA
QAT17851.1\|1883563_1883854_-	hypothetical protein	NA	NA	NA	NA
QAT17852.1\|1883903_1884476_-	hypothetical protein	NA	NA	NA	NA
QAT17853.1\|1884588_1884804_-	hypothetical protein	NA	NA	NA	NA
QAT17854.1\|1885012_1885339_+	hypothetical protein	NA	NA	NA	NA
QAT17855.1\|1885410_1887507_+	DNA-invertase	A0A0S2SXR4	Bacillus_phage	6.6e-36	25.0
QAT17856.1\|1887523_1888009_-	hypothetical protein	NA	NA	NA	NA
QAT17857.1\|1888023_1889112_-	hypothetical protein	NA	NA	NA	NA
QAT17858.1\|1889120_1890038_-	lipase family protein	A0A285PYI9	Cedratvirus	6.5e-12	31.9
QAT17859.1\|1890120_1890960_-	type II restriction endonuclease, TdeIII	NA	NA	NA	NA
QAT18075.1\|1890956_1892120_-	modification methylase, type II R/M system	NA	NA	NA	NA
QAT18076.1\|1892183_1892807_-\|protease	SOS-response repressor and protease LexA	U3PIS7	Lactobacillus_phage	2.6e-12	36.4

DBSCAN-SWA_7

1963461 : 1971145

Tupanvirus(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAT17938.1\|1963461_1965183_-\|tRNA	threonine--tRNA ligase	A0A2K9L6B6	Tupanvirus	1.6e-125	40.9
QAT17939.1\|1965218_1965677_-	hypothetical protein	NA	NA	NA	NA
QAT17940.1\|1966438_1966990_-	hypothetical protein	A0A1V0QGA1	Shearwaterpox_virus	1.6e-21	34.2
QAT17941.1\|1966986_1967199_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
QAT18082.1\|1967427_1968039_-	guanylate kinase	A0A212Q4J6	Cowpox_virus	5.1e-13	26.9
QAT17942.1\|1968043_1968865_-	nicotinamidase/pyrazinamidase	NA	NA	NA	NA
QAT17943.1\|1968861_1969365_-	nucleoside diphosphate kinase	D2E8E1	Anguillid_herpesvirus	1.3e-11	32.1
QAT17944.1\|1969412_1970315_-	hypothetical protein	S5VSZ7	Leptospira_phage	3.7e-12	39.2
QAT17945.1\|1970314_1971145_-	sporulation initiation inhibitor Soj	Q8JL10	Natrialba_phage	3.5e-25	32.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP019384

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection