CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP035281	Aminipila sp. JN-39 chromosome, complete genome	3 crisprs	csa3,cas3,PD-DExK,RT,cas2,cas1,cas4,cas7,cas8c,cas5,WYL	0	17	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP035281_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP035281_1

543999-544102

Orphan

Consensus_repeat	Method
TGTGGTATAATGATTCCAAAGATTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP035281_1

>merge|CP035281|1|543999-544102|CRISPRCasFinder
TGTGGTATAATGATTCCAAAGATTGGAGTCGGCTTTGCCGCAAGGAAAGAATCATTGAATCACACGTCGACGTAGCTTGTGTGGTATAATGATTCCAAAGATTG

>CP035281|1|1|543999-544102|CRISPRCasFinder
TGTGGTATAATGATTCCAAAGATTG	GAGTCGGCTTTGCCGCAAGGAAAGAATCATTGAATCACACGTCGACGTAGCTTG
TGTGGTATAATGATTCCAAAGATTG

Protein	Signature genes	Signature genes Name	Protein_function
CP035281.1\|QAT42195.1\|545620_545959_+\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
CP035281.1\|QAT42199.1\|548287_549841_+\|DUF4173-domain-containing-protein	unknown	unknown	gnl\|CDD\|379362
CP035281.1\|QAT42192.1\|542270_543128_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377672
CP035281.1\|QAT42198.1\|548015_548222_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|226181
CP035281.1\|QAT42190.1\|539205_540096_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
CP035281.1\|QAT42194.1\|544171_545320_+\|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|341459
CP035281.1\|QAT42202.1\|552326_552746_+\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|223894
CP035281.1\|QAT42185.1\|534333_535200_+\|spore-coat-associated-protein-CotJA	unknown	unknown	gnl\|CDD\|237030
CP035281.1\|QAT42186.1\|535190_535445_+\|spore-coat-protein-CotJB	unknown	unknown	gnl\|CDD\|378904
CP035281.1\|QAT42201.1\|550617_551781_-\|hypothetical-protein	unknown	unknown	unknown
CP035281.1\|QAT42193.1\|543143_543899_+\|exodeoxyribonuclease-III	unknown	unknown	gnl\|CDD\|197321
CP035281.1\|QAT42188.1\|536092_536350_-\|hypothetical-protein	unknown	unknown	unknown
CP035281.1\|QAT42189.1\|538030_538957_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
CP035281.1\|QAT42203.1\|552945_554460_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|225174
CP035281.1\|QAT42200.1\|549918_550500_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239945
CP035281.1\|QAT42196.1\|546075_547140_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|197216
CP035281.1\|QAT42187.1\|535447_535870_+\|manganese-catalase-family-protein	unknown	unknown	gnl\|CDD\|226076
CP035281.1\|QAT42184.1\|533751_534246_+\|DUF1836-domain-containing-protein	unknown	unknown	gnl\|CDD\|378076
CP035281.1\|QAT42197.1\|547551_548004_+\|DUF2975-domain-containing-protein	unknown	unknown	gnl\|CDD\|378586
CP035281.1\|QAT42191.1\|540295_541849_+\|recombinase	unknown	unknown	gnl\|CDD\|239739

Protein	Function_ID	Function_description	E-value
CP035281.1\|QAT42195.1\|545620_545959_+\|XRE-family-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	1.88022e-14
CP035281.1\|QAT42199.1\|548287_549841_+\|DUF4173-domain-containing-protein	gnl\|CDD\|379362	pfam13777, DUF4173, Domain of unknown function (DUF4173). This domain of unknown function contains multiple predicted transmembrane domains.	1.54547e-50
CP035281.1\|QAT42192.1\|542270_543128_+\|hypothetical-protein	gnl\|CDD\|377672	pfam06541, ABC_trans_CmpB, Putative ABC-transporter type IV. CmpB is a family of membrane proteins that are likely to be part of a two-component type IV ABC-transporter system. Families can transport multiple drugs including ethidium and fluoroquinolones. UniProtKB:Q83XH0 is a member of TCDB family 3.A.1.121.4.	5.18497e-70
CP035281.1\|QAT42198.1\|548015_548222_+\|transcriptional-regulator	gnl\|CDD\|226181	COG3655, COG3655, Predicted transcriptional regulator [Transcription].	1.4526e-28
CP035281.1\|QAT42190.1\|539205_540096_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	6.54825e-47
CP035281.1\|QAT42194.1\|544171_545320_+\|iron-containing-alcohol-dehydrogenase	gnl\|CDD\|341459	cd08180, PDD, 1,3-propanediol dehydrogenase (PPD) catalyzes the reduction of 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol in glycerol metabolism. 1,3-propanediol dehydrogenase (PPD) plays a role in glycerol metabolism of some bacteria in anaerobic conditions. In this degradation pathway, glycerol is converted in a two-step process to 1,3-propanediol (1,3-PD) which is then excreted into the extracellular medium. The first reaction involves the transformation of glycerol into 3-hydroxypropionaldehyde (3-HPA) by a coenzyme B-12-dependent dehydratase. The second reaction involves the dismutation of the 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol by the NADH-linked 1,3-propanediol dehydrogenase (PPD). The enzyme requires iron ion for its function. Because many genes in this pathway are present in the propanediol utilization (pdu) operon, they are also named pdu genes. PPD is a member of the iron-containing alcohol dehydrogenase superfamily. The PPD structure has a dehydroquinate synthase-like fold.	0
CP035281.1\|QAT42202.1\|552326_552746_+\|acyl-CoA-thioesterase	gnl\|CDD\|223894	COG0824, FcbC, Predicted thioesterase [General function prediction only].	5.04157e-38
CP035281.1\|QAT42185.1\|534333_535200_+\|spore-coat-associated-protein-CotJA	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	1.2135e-17
CP035281.1\|QAT42186.1\|535190_535445_+\|spore-coat-protein-CotJB	gnl\|CDD\|378904	pfam12652, CotJB, CotJB protein. CotJ is a sigma E-controlled operon involved in the spore coat of Bacillus subtilis. This protein has been identified as a spore coat protein.	2.37846e-37
CP035281.1\|QAT42193.1\|543143_543899_+\|exodeoxyribonuclease-III	gnl\|CDD\|197321	cd09087, Ape1-like_AP-endo, Human Ape1-like subfamily of the ExoIII family apurinic/apyrimidinic (AP) endonucleases. This subfamily includes human Ape1 (also known as Apex, Hap1, or Ref-1) and related proteins. These are Escherichia coli exonuclease III (ExoIII)-like AP endonucleases and they belong to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. AP endonucleases participate in the DNA base excision repair (BER) pathway. AP sites are one of the most common lesions in cellular DNA. During BER, the damaged DNA is first recognized by DNA glycosylase. AP endonucleases then catalyze the hydrolytic cleavage of the phosphodiester bond 5' to the AP site, and this is followed by the coordinated actions of DNA polymerase, deoxyribose phosphatase, and DNA ligase. If left unrepaired, AP sites block DNA replication, and have both mutagenic and cytotoxic effects. AP endonucleases can carry out a variety of excision and incision reactions on DNA, including 3'-5' exonuclease, 3'-deoxyribose phosphodiesterase, 3'-phosphatase, and occasionally, nonspecific DNase activities. Different AP endonuclease enzymes catalyze the different reactions with different efficiences. Many organisms have two AP endonucleases, usually one is the dominant AP endonuclease, the other has weak AP endonuclease activity; for example, Ape1 and Ape2 in humans. Ape1 is found in this subfamily, it exhibits strong AP-endonuclease activity but shows weak 3'-5' exonuclease and 3'-phosphodiesterase activities. Class II AP endonucleases have been classified into two families, designated ExoIII and EndoIV, based on their homology to the Escherichia coli enzymes exonuclease III (ExoIII) and endonuclease IV (EndoIV). This subfamily belongs to the ExoIII family; the EndoIV family belongs to a different superfamily.	1.92392e-155
CP035281.1\|QAT42197.1\|547551_548004_+\|DUF2975-domain-containing-protein	gnl\|CDD\|378586	pfam11188, DUF2975, Protein of unknown function (DUF2975). This family of bacterial proteins have no known function. These proteins are likely to be integral membrane proteins. The proteins contain a highly conserved glutamic acid close to their C-terminus.	1.2726e-16
CP035281.1\|QAT42189.1\|538030_538957_-\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	8.02429e-17
CP035281.1\|QAT42203.1\|552945_554460_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|225174	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis].	1.98483e-142
CP035281.1\|QAT42200.1\|549918_550500_+\|hypothetical-protein	gnl\|CDD\|239945	cd04501, SGNH_hydrolase_like_4, Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.	8.09274e-42
CP035281.1\|QAT42196.1\|546075_547140_+\|hypothetical-protein	gnl\|CDD\|197216	cd09117, PLDc_Bfil_DEXD_like, Catalytic domain of type II restriction endonucleases BfiI and NgoFVII, and uncharacterized proteins with a DEAD domain. Catalytic domain of type II restriction endonucleases BfiI and NgoFVII, uncharacterized type III restriction endonuclease Res subunit, and uncharacterized DNA/RNA helicase superfamily II members. Proteins in this family are found mainly in prokaryotes. They contain one copy of the conserved HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue) in a single polypeptide chain, and have been classified as members of the phospholipase D (PLD, EC 3.1.4.4) superfamily. BfiI consists of two discrete domains with distinct functions: an N-terminal catalytic domain with non-specific nuclease activity and dimerization function that is more closely related to Nuc, an EDTA-resistant nuclease from the phospholipase D (PLD) superfamily; and a C-terminal domain that specifically recognizes its target sequences, 5'-ACTGGG-3'. BfiI forms a functionally active homodimer which has two DNA-binding surfaces located at the C-terminal domains but only one active site, located at the dimer interface between the two N-terminal catalytic domains that contain the two HKD motifs from both subunits. BfiI utilizes a single active site to cut both DNA strands, which represents a novel mechanism for the scission of double-stranded DNA. It uses a histidine residue from the HKD motif in one subunit as the nucleophile for the cleavage of the target phosphodiester bond in both of the anti-parallel DNA strands, while the symmetrically-related histidine residue from the HKD motif of the opposite subunit acts as the proton donor/acceptor during both strand-scission events.	7.61396e-11
CP035281.1\|QAT42187.1\|535447_535870_+\|manganese-catalase-family-protein	gnl\|CDD\|226076	COG3546, COG3546, Mn-containing catalase [Inorganic ion transport and metabolism].	4.10478e-45
CP035281.1\|QAT42184.1\|533751_534246_+\|DUF1836-domain-containing-protein	gnl\|CDD\|378076	pfam08876, DUF1836, Domain of unknown function (DUF1836). This family of proteins are functionally uncharacterized.	2.22922e-26
CP035281.1\|QAT42191.1\|540295_541849_+\|recombinase	gnl\|CDD\|239739	cd03770, SR_TndX_transposase, Serine Recombinase (SR) family, TndX-like transposase subfamily, catalytic domain; composed of large serine recombinases similar to Clostridium TndX and TnpX transposases. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. TndX mediates the excision and circularization of the conjugative transposon Tn5397 from Clostridium difficile. TnpX is responsible for the movement of the nonconjugative chloramphenicol resistance elements of the Tn4451/3 family. Mobile genetic elements such as transposons are important vehicles for the transmission of virulence and antibiotic resistance in many microorganisms.	5.13297e-33

>CP035281.1|QAT42193.1|543143_543899_+|exodeoxyribonuclease-III
MKLITWNVNGLRACMGKGFLEFVKKEEADFVCLQETKMQQGQAEVPLEGYHQFWNSAEKKGYSGTAIFAKEEPLSVHYHINAEGHDTEGRAITLEYKDFYLMTEYTPNAKDKLARIDYRLEWEAARRAYVKELDLKKPVILCGDLNVAHQEIDLKNPKTNRGNAGFSDEERNAFGELLGLGLTDTYRHLYPEQTGAYTWWSYRFNARANNAGWRIDYFLVSDRIKERVREVELRNDILGSDHCPVILHIDL
>CP035281.1|QAT42192.1|542270_543128_+|hypothetical-protein
MYEFLCYFVIYSFLGWCMEVAYAAVNSGRFVNRGFLNGPVCPIYGFGMIIVISCLTPLLYNKVFLFLGAVVLTSALEWITGFALEKIFHGKWWDYSEMPFNLNGYICLKFSIMWGLACVLIMDVIQPVIFTIVSKLPVTAGWILLSAICAVMLADAISTVVTVNNLNKQLARLSEISEKLREVSDDLGENIYESVTTIKEKSEAIKERSEELKEELERKAEGLEKRAEALEKRAGDFRNELRNAYEEEIERHFFGQKRMLKAFPNLKSIANGEHLTKLKDKIKQL
>CP035281.1|QAT42191.1|540295_541849_+|recombinase
MRAALYCRLSEEDRNKRTEKDDSESIQNQKSMLVRYAVEKQWDIYRIYSDDDYTGSDRNRPEFNKMLADAESGKFDVILCKTQSRFTRELELVEKYIHGLFPVWGVRFISIVDNADTENKGNKKSRQINGLVNEWYLEDMSDNIKSVLTDKRKKGMHIGAFALYGYKKDPNQKGHLIIDEEAAEIVREVFLLFSKGYGKTAIARSLNERGIPNPTEYKRLKGLRYRQPKDENSTLWKYYTIADMLNNEIYIGNMVQGKYGSVSYKSKKNRPRPRAQWYVVEGTHEPIIERELWDKVQAIIGHHAKPFKGGTLGLFAKKAVCANCGYTMRSSKSHEKYYLKCPTRYVLKKACEGAFISVEKLEETVLLEINALIAQYMDEEYIKKNMDMDSPLLPRKKKLESRIQAYINRKEEYSRALKQLYLDKAKNWMTEEQYLEFTQGFEADKKKMERLIQVSRKELDEVIEKLSDTAHKEQAVDPCRSLEKLDRQMVEELIDFISIGKRDQITGILPIEIHWSF
>CP035281.1|QAT42190.1|539205_540096_+|LysR-family-transcriptional-regulator
MSTQKYEAFIKTAELGSFKKAAESLGYTQAGISYMLNTLEDELGVILFIRDYGGVRLTSEGEQILPWIRDVCNSERRLNARLNELKSVESGIIRVAAFTSISIHWLPGMIHAFLQEHPKVEFDLRWSDDSNELEQLIYRGDVDCGFLILPAPKDLITIPLKKEHLMAVLPENHPLADAPYFPIAALAEYPYIGLKEEELYSETEQVFTSHDIKPNVFITAENDYTVMALVSKGFGFSIFPELSLLSPCFPMVRKELESPVYRELAIAIRSYETASTATLSFLECAEQWVNDFYKEE
>CP035281.1|QAT42189.1|538030_538957_-|DMT-family-transporter
MEKKKTILYGSLLLIECFLWGVGNPIMKIGLEVIPPLFCLSVRYILAFLIFLLFFAKKVFAQVTVKQLPAYIIIAACTAASFITSAFSLMYTTATNAGFLMSLAVIFTPFLSYFVLKAKMNKKHIFAVLMVTIGLFLLCSSGGSFQFGLGEAIALLCSVSGSCMLVFSSKYIQDMDPLVTSVMQTGFTGLFCLIFTLMFEDIPSLTSIPMVGWGVIVYLAVGCTCIAYICQNIALRHVSATYVALAFCSEPIFTAIASYFLLGEVLSARGLLGAVLIMISIVIASLLPEEVPNTVEENRLEVSAEAEL
>CP035281.1|QAT42188.1|536092_536350_-|hypothetical-protein
MDNLKNTRNAENRTQNSRNNAENRTQNSRNNAENRTQDSRNNSQNTTGSNSTDSRNSTGARNDSKDCRNNTQNSYRDAAKDSKQR
>CP035281.1|QAT42187.1|535447_535870_+|manganese-catalase-family-protein
MWIYDKKLQFPVNIKNPNPAMAKYIISQYGGPDGELGASLRYLSQRYSMPFKQCIGILNDVGTEEIGHFEMIATIVHQLTRNLTIDEIKESGFGDYFVDHTTGIYTVSAAGIPFDATCFASKGDAITDLMEDMAADAALL
>CP035281.1|QAT42186.1|535190_535445_+|spore-coat-protein-CotJB
MQMNRIDLMRRVQMLSFVLVDVSLYLDTHPTDKAGLNFFNKYNTLYQSAKEEYEKNYGPLTIAGTNDTNSWSWIDEPWPWQREV
>CP035281.1|QAT42185.1|534333_535200_+|spore-coat-associated-protein-CotJA
MNSNISGPARGGAVLQKKGETRREPNEPYVGMPIYLDDSFFDLFSGDGSFECPVPENTDEDMNEVSPTPTPAPAPTPTPTPTPAPRPTPTPAPAPTPTPAPAPTPAPTPTPTPTPAPTPTPAPTPTPTPAPRPTPTPAPAPTPTPDNGGWMPDMCNGGGRMPNRRDDDWMQGGCNDGCRMPSRRDDDWMSDRCNNRDWMQDRCNGGNMAPGTGNGGKVSPETGNGGGRMPEMGDGRGRMPDDCVGNCPIAMAYVPWQQWNDTYDLEKGFLSGTIFPELDLPWVGGACK
>CP035281.1|QAT42184.1|533751_534246_+|DUF1836-domain-containing-protein
MEELKELKRILQEQRPNNWEDIPDIDLYMDQVLNYMVRQHIGLESGETLTSAMVNNYIKKELLPRAKGKRYERQHIAYLTAICLFKQILSVDSTKELLKSQLADSDIKSFYEKYCVKLDQEYTGVAEKIDEKMTKQDISELVLELAISSYAQKIACERLLELLV
>CP035281.1|QAT42194.1|544171_545320_+|iron-containing-alcohol-dehydrogenase
MKEFSISTQVFFGEGSLDRLNQIVNKKVLIVCDSFMVKSGMVDQIKDRLKDCEVAIFSDVVPDPPVEVIAAGMMALKNCGANVMIALGGGSSIDAAKAIRDFARRLPDIGVTVEECYAIPTTSGTGSEVTQFSVITNAQEGIKYPMANKDLIPMVAILDPELVTSVPDFITADTGMDVLTHAIEAYVSTDATDFSDALAEKAVTLVFRFLPEAFKNGNDLLAREKMHNASCLAGMAFNAAGLGINHSLAHAVGGKLHISHGRSNAMLLPCVIEYNANLDKGGYNKEFDVAAKKYQRLAKLLDLPANTVYVGVNSFTRKIVELQKMLKVPATLKELGADLNLVQEERGDILEAAMNDICTKTNPRKTNKEDLSKILDKLIGAK
>CP035281.1|QAT42195.1|545620_545959_+|XRE-family-transcriptional-regulator
MDKKQIDYKALGNRVRKWRKEKGVTQEELAGAIEKTVQHISNIERAHTKVSLGTLTDIANFLDVSLNDLMCDSLRNSGNAYQLEYSLMIKDCDEDQYRKLNKTIKALMDTWD
>CP035281.1|QAT42196.1|546075_547140_+|hypothetical-protein
MFNIQDPRYQNSRLLNEALLEACEYAVYGAGTYAFVSADGVHLLMKNQTFEKFITRGTYHLIIGMDEITNIKTLAALKEYGRKFPNLRSDAFIHHTAGSTFHPKYSWFKYETGGMLVLGSGNLTARGLRKNTEAFVVQKLNEEEILSIETKWKDWVDSSRECIKSLQDPEVILKASENAGLAVKNLKTAGWEDEKGVWTFGPDSEVFIAEIRDHWKSTRYKMDVDLPTGNFFFGLGFLPEKEIVLKKVAARGNLEEIESKTMSFTSDKKYRMEFTIQENEEKKIKGCPFTVFVRLAPRTFLYTIILPDERGYKQLRRQLKRMPRDQEGLIRYHTNGGQLKERVNALAILDYLNR
>CP035281.1|QAT42197.1|547551_548004_+|DUF2975-domain-containing-protein
MWNSNKSLQLSCICTRFVMVLVVVCAAALPYLIDIYLSIGPHYISEMDMGPFMVILYACCIPALAALFNLDRLLRNIKKEEVFTDKNVTCLRRISWCCFGAAVLVVMAGYYYFLFYFVAVVIAFIGLILRVVKNVIEQAVIIKAENDFTI
>CP035281.1|QAT42198.1|548015_548222_+|transcriptional-regulator
MAIIVNLDVIMAKRKMSAGELSEKIGITPANLSILKNNKAKAIRFSTLEEICKALDCQPGDILEFVED
>CP035281.1|QAT42199.1|548287_549841_+|DUF4173-domain-containing-protein
MKYYFTKSGEVNPNGHEKSYDIKGIGMKPMKFELADFWFAAALLFCGFLYWNFIWTTDMGAGVTAFSFILCGAVYLYFKAKGVTQSRKSMVWLALTAVSSVQFLLFDGYTVKCLNLLFTSACFIYWIAVSTGRCLDIKLSGYTLWDLLNQTFIVPFSNIACEFFGLKQGLSKSRYGRNVVYIAAGAIVFLPLMVFVTEQLSLADAAFEGVLDKILQSISLNSVLTYTFQFIMGIPVACYLFGLIYGNTAGRNTDSMSREEIRRISDTVSFAPKLTVYTVMIVFNLIYLLFFVSQTAYFLSAFQNILPDTFTYAEYARRGFFELCKVSGVNAFLIFLAHAFVTKKEKSEEVYKSPKMLRFQTAFMSVMTISLIITALRKMYMYIQFYGLTQLRVYTSWFMVMLLLAFIILFIRQIKVFNAARIMIIGGILGFMVLSYGNADGNIAKYNIENYENGRLEEMDYNALFTLSDGAVPYAYDLYKKTEDAEKKQILYNYIVYGNQEGQNITHEKSFRDFNIQ
>CP035281.1|QAT42200.1|549918_550500_+|hypothetical-protein
MSKIVFIGNSIINGFPYDRNQEFVSLYRQASGNEVINKGINGDTIRGVAGRFAQDVLAYKPDQVAILTGTNEFIYKEALPEQCMKEIAYLAELARKQHIEPVLLTPLPVDPVMAKSRWMVCDDVDYELVQEQITELKKRMILYGKENYVQVIDTNYAFSEYVEKVGVQTAYYDGIHPTREGHRFLAEIIGRFL
>CP035281.1|QAT42201.1|550617_551781_-|hypothetical-protein
MKIESSTIAVNSAREYESVEFTKAKSKNEIWVPADPDNKKDQIEEEDNLSKFLNATKKLLADDGSPMQSGSASFFSYNKKSEKSSSGSVLSTGKSEEGSFSLMDMEDYKIMLLRKMIELLTRDSKGGFCYKGLTERSQQTLKSLSLNFEVPAELSGTQAAPAPGMWVRNVYAEHFLSEEESTTFSSVGIAKTQDGRELSFGIDLEMSRSFMEYTGIKWSEQVVMSDPLVINLDNNPVSLSDQKFCFDIDSDGKDDQISYLSKGRGYLALDKNEDGKINNGKELFGAKTGNGFAELSAYDTDKNGWIDESDEIYNKLKIWIKAEDGTDQLLSLKAADIGAIYLDSAKTDFLLKSAESGQVNGQIRRTGLYLKESTGEAQTAQQIDVSI
>CP035281.1|QAT42202.1|552326_552746_+|acyl-CoA-thioesterase
MKKYETEIRVIYADTDAMGIVYHTNYIKWFEAGRNELLRQIGYPYSRLEEEGIWLPVIAVTCEYKHPGKYDDILLIKSWVKELRAATVLMGYEIFRKETGELLVTGTTKHGITSPELKPVRLKKVNPTLYDRLAEDLGG
>CP035281.1|QAT42203.1|552945_554460_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MEKGQKCQLQIDDMSNEGQGIGRAEGMAVFVKGAMPGDTVIAEITKVKKNYAFAVTTEIIEPSPYRIEMECPYAGDCGGCTYAGMNYEGQLAVKERQVREKLIRLGGLEHPKLNPIVGMDKPYAYRNKAQMPISTGGIITRKGGIIENLGKCTIGFYKAKSHDVVNCTQCLLQAPPVTAVAEVLRQFMKSDNITAYDPKWEKGLMRHLVVKTAMGTGEVMAILVINGKGIPNSSKLIEMMDEAVGNLPVQENGIEYSLESVVININKGKTSEIMGKECLTIAGKPTILERVGDMEFEISPLAFYQVNPVQMEVLYNKVLEYAQLKGHERILDLYCGVGTIGLFCAEAMRKAGKDADTGNTGQVLGIESVKGAVLDANRNAVINGLVNAQFLCGRAEEELPKVLAGYVDKEGFEIPPFQPDLIILDPPRAGCAPELLEATAAAAPDKVIYVSCDPATLARDVKILGKLGYKFVEGTPVDMFPWTRCVETCVLLSHKNPQTSPPSL

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Crispr_ID: CP035281_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP035281_2

565624-565775

Orphan

Consensus_repeat	Method
TTTTATTACGTAGGAAATATCGCAAGCGATATTGACGGAGTATCATAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP035281_2

>merge|CP035281|2|565624-565775|CRISPRCasFinder
TTTTATTACGTAGGAAATATCGCAAGCGATATTGACGGAGTATCATAAAGAGCTACCACTAAATGCGAGCGAATGCGAGCTAAAAGCGCCTCGCAGAGGATTTTTTTATTACGTAGGAAATATCGCAAGCGATATTGACGGGGTATCATAAA

>CP035281|2|2|565624-565775|CRISPRCasFinder
TTTTATTACGTAGGAAATATCGCAAGCGATATTGACGGAGTATCATAAA	GAGCTACCACTAAATGCGAGCGAATGCGAGCTAAAAGCGCCTCGCAGAGGATTT
TTTTATTACGTAGGAAATATCGCAAGCGATATTGACGGGGTATCATAAA

Protein	Signature genes	Signature genes Name	Protein_function
CP035281.1\|QAT42215.1\|568218_570249_+\|Na+/H+-antiporter	unknown	unknown	gnl\|CDD\|223104
CP035281.1\|QAT42212.1\|563156_564062_+\|DUF2935-domain-containing-protein	unknown	unknown	gnl\|CDD\|378573
CP035281.1\|QAT42213.1\|564204_565344_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|308585
CP035281.1\|QAT42216.1\|570262_570874_+\|DNA-3-methyladenine-glycosylase	unknown	unknown	gnl\|CDD\|187726
CP035281.1\|QAT42208.1\|558874_559645_+\|4,5-DOPA-dioxygenase-extradiol	unknown	unknown	gnl\|CDD\|153375
CP035281.1\|QAT42223.1\|580625_581198_+\|indolepyruvate-oxidoreductase-subunit-beta	unknown	unknown	gnl\|CDD\|180732
CP035281.1\|QAT42218.1\|572109_572883_+\|Ku-protein	unknown	unknown	gnl\|CDD\|238408
CP035281.1\|QAT42204.1\|555424_556639_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|162098
CP035281.1\|QAT42214.1\|565853_568202_+\|ferrous-iron-transport-protein-B	unknown	unknown	gnl\|CDD\|223447
CP035281.1\|QAT42217.1\|571046_571946_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235853
CP035281.1\|QAT42219.1\|572887_575329_+\|DNA-ligase-D	unknown	unknown	gnl\|CDD\|235658
CP035281.1\|QAT42206.1\|557863_558109_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|211578
CP035281.1\|QAT42222.1\|578856_580629_+\|indolepyruvate-ferredoxin-oxidoreductase-subunit-alpha	unknown	unknown	gnl\|CDD\|274526
CP035281.1\|QAT42209.1\|559961_560432_+\|hypothetical-protein	unknown	unknown	unknown
CP035281.1\|QAT42220.1\|575467_576235_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235506
CP035281.1\|QAT42205.1\|556714_557365_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
CP035281.1\|QAT42211.1\|562563_562929_+\|DUF4180-domain-containing-protein	unknown	unknown	gnl\|CDD\|379371
CP035281.1\|QAT42210.1\|560433_562473_+\|ATPase	unknown	unknown	gnl\|CDD\|238731
CP035281.1\|QAT42207.1\|558111_558426_+\|DNA-methyltransferase	unknown	unknown	gnl\|CDD\|226219
CP035281.1\|QAT42221.1\|576536_578597_+\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|226350

Protein	Function_ID	Function_description	E-value
CP035281.1\|QAT42215.1\|568218_570249_+\|Na+/H+-antiporter	gnl\|CDD\|223104	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism].	4.66555e-83
CP035281.1\|QAT42212.1\|563156_564062_+\|DUF2935-domain-containing-protein	gnl\|CDD\|378573	pfam11155, DUF2935, Domain of unknown function (DUF2935). This family of proteins with unknown function appears to be restricted to Firmicutes. The structure of this protein has been solved and each domain is composed of four alpha helices. A metal cluster composed of iron and magnesium lies between the two domains.	3.59182e-30
CP035281.1\|QAT42213.1\|564204_565344_-\|hypothetical-protein	gnl\|CDD\|308585	pfam03022, MRJP, Major royal jelly protein. Royal jelly is the food of queen bee larvae, and is responsible for the high reproductive ability of the queen. Major royal jelly proteins make up around 90% of larval jelly proteins. This family also the sequence-related yellow protein of drosophila which controls pigmentation of the adult cuticle and larval mouth parts.	1.12419e-25
CP035281.1\|QAT42216.1\|570262_570874_+\|DNA-3-methyladenine-glycosylase	gnl\|CDD\|187726	cd00540, AAG, Alkyladenine DNA glycosylase catalyzes the first step in base excision repair. Alkyladenine DNA glycosylase (AAG), also known as 3-methyladenine DNA glycosylase, catalyzes the first step in base excision repair (BER) by cleaving damaged DNA bases within double-stranded DNA to produce an abasic site. AAG bends DNA by intercalating between the base pairs, causing the damaged base to flip out of the double helix and into the enzyme active site for cleavage. Although AAG represents one of six DNA glycosylase classes, it lacks the helix-hairpin-helix active site motif associated with other BER glycosylases and is structurally distinct from them.	6.34685e-104
CP035281.1\|QAT42208.1\|558874_559645_+\|4,5-DOPA-dioxygenase-extradiol	gnl\|CDD\|153375	cd07363, 45_DOPA_Dioxygenase, The Class III extradiol dioxygenase, 4,5-DOPA Dioxygenase, catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine. This subfamily is composed of plant 4,5-DOPA Dioxygenase, the uncharacterized Escherichia coli protein Jw3007, and similar proteins. 4,5-DOPA Dioxygenase catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine (4,5-DOPA). The reaction results in the opening of the cyclic ring between carbons 4 and 5 and producing an unstable seco-DOPA that rearranges to betalamic acid. 4,5-DOPA Dioxygenase is a key enzyme in the biosynthetic pathway of the plant pigment betalain. Homologs of DODA are present not only in betalain-producing plants but also in bacteria and archaea. This enzyme is a member of the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon.	7.97655e-116
CP035281.1\|QAT42223.1\|580625_581198_+\|indolepyruvate-oxidoreductase-subunit-beta	gnl\|CDD\|180732	PRK06853, PRK06853, indolepyruvate oxidoreductase subunit beta; Reviewed.	1.08775e-90
CP035281.1\|QAT42218.1\|572109_572883_+\|Ku-protein	gnl\|CDD\|238408	cd00789, KU_like, Ku-core domain, Ku-like subfamily; composed of prokaryotic homologs of the eukaryotic DNA binding protein Ku. The alignment includes the core domain shared by the prokaryotic YkoV-like proteins and the eukaryotic Ku70 and Ku80. The prokaryotic Ku homologs are predicted to form homodimers. It is proposed that the Ku homologs are functionally associated with ATP-dependent DNA ligase and the eukaryotic-type primase, probably as components of a double-strand break repair system.	2.41765e-114
CP035281.1\|QAT42204.1\|555424_556639_-\|MFS-transporter	gnl\|CDD\|162098	TIGR00900, multidrug_transporter, H+ Antiporter protein. [Transport and binding proteins, Cations and iron carrying compounds].	1.69726e-66
CP035281.1\|QAT42214.1\|565853_568202_+\|ferrous-iron-transport-protein-B	gnl\|CDD\|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	0
CP035281.1\|QAT42217.1\|571046_571946_-\|SDR-family-oxidoreductase	gnl\|CDD\|235853	PRK06701, PRK06701, short chain dehydrogenase; Provisional.	5.65712e-165
CP035281.1\|QAT42219.1\|572887_575329_+\|DNA-ligase-D	gnl\|CDD\|235658	PRK05972, ligD, ATP-dependent DNA ligase; Reviewed.	0
CP035281.1\|QAT42206.1\|557863_558109_+\|hypothetical-protein	gnl\|CDD\|211578	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM). Function: methylation of specific adenine residues; required for both restriction and modification activities. The ECOR124/3 I enzyme recognizes 5'GAA(N7)RTCG. for E.coli see (J. Mol. Biol. 257: 960-969 (1996)). [DNA metabolism, Restriction/modification].	1.55814e-09
CP035281.1\|QAT42222.1\|578856_580629_+\|indolepyruvate-ferredoxin-oxidoreductase-subunit-alpha	gnl\|CDD\|274526	TIGR03336, IOR_alpha, indolepyruvate ferredoxin oxidoreductase, alpha subunit. Indolepyruvate ferredoxin oxidoreductase (IOR) is an alpha 2/beta 2 tetramer related to ketoacid oxidoreductases for pyruvate (1.2.7.1, POR), 2-ketoglutarate (1.2.7.3, KOR), and 2-oxoisovalerate (1.2.7.7, VOR). These multi-subunit enzymes typically are found in anaerobes and are inactiviated by oxygen. IOR in Pyrococcus acts in fermentation of all three aromatic amino acids, following removal of the amino group by transamination. In Methanococcus maripaludis, by contrast, IOR acts in the opposite direction, in pathways of amino acid biosynthesis from phenylacetate, indoleacetate, and p-hydroxyphenylacetate. In M. maripaludis and many other species, iorA and iorB are found next to an apparent phenylacetate-CoA ligase.	0
CP035281.1\|QAT42220.1\|575467_576235_+\|SDR-family-oxidoreductase	gnl\|CDD\|235506	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional.	1.78195e-76
CP035281.1\|QAT42205.1\|556714_557365_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	4.88953e-18
CP035281.1\|QAT42211.1\|562563_562929_+\|DUF4180-domain-containing-protein	gnl\|CDD\|379371	pfam13788, DUF4180, Domain of unknown function (DUF4180).	4.17692e-50
CP035281.1\|QAT42210.1\|560433_562473_+\|ATPase	gnl\|CDD\|238731	cd01454, vWA_norD_type, norD type: Denitrifying bacteria contain both membrane bound and periplasmic nitrate reductases. Denitrification plays a major role in completing the nitrogen cycle by converting nitrate or nitrite to nitrogen gas. The pathway for microbial denitrification has been established as NO3- ------> NO2- ------> NO -------> N2O ---------> N2. This reaction generally occurs under oxygen limiting conditions. Genetic and biochemical studies have shown that the first srep of the biochemical pathway is catalyzed by periplasmic nitrate reductases. This family is widely present in proteobacteria and firmicutes. This version of the domain is also present in some archaeal members. The function of the vWA domain in this sub-group is not known. Members of this subgroup have a conserved MIDAS motif.	1.3249e-43
CP035281.1\|QAT42207.1\|558111_558426_+\|DNA-methyltransferase	gnl\|CDD\|226219	COG3695, COG3695, Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair].	3.58053e-26
CP035281.1\|QAT42221.1\|576536_578597_+\|PAS-domain-containing-protein	gnl\|CDD\|226350	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms].	7.75379e-136

>CP035281.1|QAT42213.1|564204_565344_-|hypothetical-protein
MKYHILLSWNRLDWNFPDANMKSEFEMNQYWKHAIPTGIKVDQNGIIYAAVPRWAEGIPATMNYITIENEKPILHAFPSWEWNQAGNIQVLQSVMGYEIDEHNRMWILDQGKIAYAPSEPGSQKLIIWDLNSNQMIDYITIPNEIAPYRTSFLNDIVVDNKNGFAYITDSGSGWPNHPVVGGIIIYDMKTKAFRRVLDQHYSTQDFPGFIFEIDYRPVYSDRPMKLGADGIALSADRSTLYYCPLTARNLYAVDTALLRDYNIPLEVISNAVQYLGSKGTTTDGMCADNKENVFYTMLEGKGIGFYHADTGQFHKLIAEDRMVWVDGVAFDQNGSILFNSNRLNQIFENPQTQIDWDYPYNFVLWKACINQNIKSYLYG
>CP035281.1|QAT42212.1|563156_564062_+|DUF2935-domain-containing-protein
MPYLQNSMELNLFFLRILKEHALFMQLSFMPRDKEWANMAVDLRERLTQLLKQAVILSKGYISQEVMTSGELFTQYTEEAERQMEGFTGVPIDIQITMDEYDMGGAMIPPSSMKPYMDALNQNALALSQQLLQFMKRVLGDVDACRAITTLYPTQIDHLAREVRHYIFMLKMLLSGDMEITPQEFAGEQAFWNEIMREHAQFIDGLLDPSETGLKEQASVFAEQFANLVQQAENAEENPEILPQVTADSKDATYGIENFKSQGAQGILSCKIQSIINPLLSDHVLREANYYLRILGENAQA
>CP035281.1|QAT42211.1|562563_562929_+|DUF4180-domain-containing-protein
MEIRIIKENNVEIAIVNSNELLITDVQSAIDFMGTTEYETGCSCFIVNKSAICEDFFNLSTKIAGEILQKFITYHKKIAIIGDFSIYTSKSLKDFIYECNNGKDIFFLPDEQQAVEKLSRF
>CP035281.1|QAT42210.1|560433_562473_+|ATPase
MKQTYRLSPARQMTEEEESLVWQKPSSHIESEAERRIYQEVVRNWNRGEMKISTILLEGDAGSGKTQLAKALSADFNLPYTKVTCFADMDKSDVLGSILPVLSEKDDKSGTVEYQYYPSEIVRAYENGWLLEIQEPTVIRDAAVLMALNSALEPDGSLNLPTRIVHRHPDFIAVITTNRGYNGCRPLNEALRDRVQHAEKLDLPPKAVMMERAEAKTGYHSEKVLSLLAEAIILLDKTAQANAIKGVAGMRSYIFWVDAVASGASVQNTLYYKVLYKITTDPQELALLEQALISHGLTAKLEELDRACHSHPDGENPEVMELHIAENGEYSAELDQTDKNAIRLRKSTDSEGHSDTNSDKSTDVTSNDNGDNGTPFYHELNQSITTELQKKEFRKQLNREARQSNQGTCHEAIRLIVHRPEATSQSREEYHNMAADLLPVIRELIRKTNPLLEHEVSSEFAKSRLYGTKFCADQAAALDFRVFARKRPPEEEPSLAVALRIDESASMSAFGRLEAAKQAAVALYEFCTGCGIPIMIYGDTADRSKLEQMSIYAYVDFESRDADEKYTLMNIQARSNNRDGMALRIISDRLLHAPQKTKLIISISDGQPKAMPDYSGEKAAHDMKDTLQEFRRKGIQFLAAAIGQDKEAIRELYGAENTLDITDLKQLPARLVQIIARLL
>CP035281.1|QAT42209.1|559961_560432_+|hypothetical-protein
MEMNEKVVIISNGYDRIDGRNAYQSDIKRLTLGAPMLEENKKMQIAVQIWKMNKEDELIVAQELPVHQVFDMMIFLSRTLLYFKEAYRLPLLYDPEKPTVERIGVQGDVLPVEVCTDNQNINEDIKAFAQSLNDLGELIGERQRVLGRILEELECY
>CP035281.1|QAT42208.1|558874_559645_+|4,5-DOPA-dioxygenase-extradiol
MSKMPMMFVGHGSPMNAIEDNRYTRGWRKMVEKIPKPEAIISISAHWYTKGTKIMNEENPKTIYDMYGFPKELYEIRYNAPGNPPLAGNAKSLISRRSVFDNSWGIDHGTWSVLVHMYPERDIPVFQISIDASAPPEVHYQMGMELKSLRQQGVLLLGTGNIVHNLQLVDWEMKDKGFNWAYQFDDFIKENIENGNHDEVIHYQGMGETARLAVPTPDHFNPILYILGAVDKEDNILVYNNSCMMGSLSMTSYLFT
>CP035281.1|QAT42207.1|558111_558426_+|DNA-methyltransferase
MKKVLEENLIYEILSVVEEIPKGSVATYGQIARLVGRDKNARLVGKVLSRAEYYGEYPCHRVVNHAGRLVPGWIEQGNLLRNEGIPLKDETHVDLKKCQWQILL
>CP035281.1|QAT42206.1|557863_558109_+|hypothetical-protein
MFFGVYIPITSLVFKENRKTKDLLLIDAANEFEKEKNQDNLTDKNINKIIETYQESGKLRRTFKIHIFSRDVKKHIRKIWR
>CP035281.1|QAT42205.1|556714_557365_-|TetR/AcrR-family-transcriptional-regulator
MARNKYPEITVNRILDTAMKLFMTKGYEHTTVQDIINELGDLSKGAIYHHFKSKEDIMGAVNNRMLKQGLGSMQTIAADNSLTGIEKLHKVLLFSISSAKQEAIDSIMPSFMKNPQLLALHMRDTLGSASNLFVGIIEDGLRDCSIHTSQPRELSQMILLCFNVWINPWMYSWKPEEIKNIVVFIKNTFEQIDIPIMTPEIIKALEELYAITGNEK
>CP035281.1|QAT42204.1|555424_556639_-|MFS-transporter
MLKNASWKQKFFTIALGQTISLIGSSAVQFSLIWWMASKTESPMLLALAGLSAYVPQFFLGPFVGVWIDRLKRKQVIIIADLFTGMIALMFSVFFFIGEPPYWSVCIVLGVRAIGNIFQTPAIQSVTPMLVPHNELVRANSWNQFMQSGSLMLGPVVGAAMYAILPMPIILISDMAGAIIAATTVAITKIPELKPQLKDSYNFISELKDGISVFLQDKKLCIVTVAAAICMIFYMPISSFFPLMSSSYFHVTVWHASIVQFGYAGGMMLCSLLISLYGTIRNKLKTVHLGLLGLSITIFLCGILPQTEFAFWGFALLCTLMGASGNFYNIPYIAYMQETIPKEKQGRAFSIMNSLMSVTMPLGLIIAGPFAEVHGVSSWFFISGIVFIVITGMSFFLIRMQDKR
>CP035281.1|QAT42214.1|565853_568202_+|ferrous-iron-transport-protein-B
MTLQELEIGKSASILSVGGEGALRQHFLDMGLIPGAEVTMVKLAPMGDPMQLKIHGYELTIRIADAKKIQIKPIDTPAEEKEINRNKKQIPHPGLGEGGKYHVKANEHPLKDGEQLTFALAGNQNSGKTTFFNRLTGANQHVGNFPGVTVDRKDGVIKGHENTLVTDLPGIYSMSPYSSEEIVTREFILHEKPKGIINIVDASNIERNLYLTLQLMELEVPMVIALNMMDEVRENGGSILINEMEQLLGVPVVPISAAKNEGIDETIEHALHVAKYQEKPGRMDFCSTDGEGSAVHRCIHSIMHLIEDHAKKAGIPERFAATKLAERDKLVLEKLNLDDNEKDILEHIILQMEKERGLDCAAAIADMRFSFIQKLCSATVIKPKESKEHARSRKIDQILTGKYTAIPAFIAIMGLVFWLTFNVIGAFFVNLLDMGITWLTNITDTALGALDVNPALHSLIIDGVFNGVGSVLSFLPIIVTLFFFLSMLEDSGYMARVAFVMDKLLRKIGLSGRSIVPMLIGFGCTVPGVMASRTLSSERDRKMTILLTPFMSCSAKLPIYVFFTAAFFPKHGALVMIALYFTGIAMGILVTFLLKGSVFRGEAVPFVMELPNYRMPGSKNVAQLLWEKAKDFMQRAFTIIFIATIVIWVLQTFDLRFEIVTNSQDSILASAAGIIAPIFKPLGFGDWRISTALITGFIAKESVVSTLSVLIPSKTILFSLLTPLNAAGLLVFCLLYTPCVAAVASIKRELGGKWTMVVVIGQCVIAWLAAFIVHMVGLLIGL
>CP035281.1|QAT42215.1|568218_570249_+|Na+/H+-antiporter
MDLLAIILLLMLALLISNVIGHYVPFIPMALTQIIFGVIIALIIGDYTFEIGAEWFLLLFVAPLLYNDGRHFSREELWGMKAQIFGNAFVLVILTTVICGYVINQLIPSVPIAAALALAAILSPTDPVAVNGIAKRINVPEKVMVLVRGESLINDASGLIAFKYAIAAAVTGYFSLKEAALDFSYTFLIAVISGVLFGLVITFTRFNLRKNGINDPVFHSLLQILTPFGIYIVTEDLLHASGIIAVVAAGIIYSIVREHTETYMAEEQLLTENTWSIILFVLNGFVFLLLGMNIPSAMFETISNPDMGNWLVFGYVAVIGFVILAIRFVWSLVSKAYSYYVGKRKDAEKPEIKTALITTLAGVRGAVTMAGVLTVPAVLENGEIFPARSLIIFIAAGVILLLLILATVLLPLLCKENPESNAQEGTDLTWAKNKLLLSAIKKIKEETTVENESAALQLIDEYTVSFQKNLYGHKSDEEHAERYNRKINEIRLLALNMQRKYISELLEKDEIDSTVFAFLTKFLDYREENVDYNFRSGAVFFLKRVMRGFSRLSGKRYKKSGVELEHLHFIRDVQIKAMEAAVEGLEKYAKTQEQPEYIYAVVFDYEKMLQRVKRTNDRDDDRMEEQKEELRFKVLDAERSEIRRLYEAGEINGEQEKELRRFTNYIESIILYEHNE
>CP035281.1|QAT42216.1|570262_570874_+|DNA-3-methyladenine-glycosylase
MKKLDREFYDRDSVLVAKELLGKILVHETNGQRISAKIVETEAYMGVEDKAAHSYGGKRTPRVEVMYGSSGFSYIFMIYGMHCCFNIVTNEKEKPQAVLIRAAEPLEGVEWMAQKRFKKPYEQLTKLQRRGLTNGPGKLCCALSLDRSFNGMDLCGDEVYVEDGKTRNSNIVTTKRVNIDYAEEARDYPWRFYIKDNEYVSVK
>CP035281.1|QAT42217.1|571046_571946_-|SDR-family-oxidoreductase
MNPFYPYLGYKEECNQVPIQFPPQHQPVQPGLETLMVPKPVFNDPAYIGTGKLKGKVALITGGDSGIGRAASVAFAKEGADVCIVYYNEHEDARITKSYIESHGRKCLLFAGDIRDEDFCRKTVSDCVSELGRLDVLVNNAGVQFPQDSIEDISMEQMETTFRINFFGMFLMTKLALPHLTCGSAIINTASVTAYIGYDDLIDYSSTKGAIVSFTRAMARSLVSKGIRVNAVAPGPIWTPLQPASRSAEYIETFGSDNPMKRAGQPVELAPTYVYLACDDSSYVTGQVLHVDGGQSMQS
>CP035281.1|QAT42218.1|572109_572883_+|Ku-protein
MISRKSVITFGMVAIPIAMHTTTQDHDIHFNQLHKEDNSRIRYKKTCAHCGKEITAGDIVKGFEYDKDKYVVVTDEEIEKVKTEKEKSIQILHFAQLNQISPVYYEKTYQAVPETGGEKAFELLRSALMTEQKIAIGKTVMGTKDTLMAIIPREDGILISTMFYADDIKELQKQYVKPEVSDQELNMAKVLIDSMDTPFDPSKYKDEYQERLRALIETKISGKEIVAAEPDRAGKVIDLMDALKASVEKAKKDKEMA
>CP035281.1|QAT42219.1|572887_575329_+|DNA-ligase-D
MEKKLSEYNQKRDFGKTFEPEGKIEDSEEQLKFAVQHHRARRDHYDLRLEWMGVLLSWAVPKGPTYNTKEKRLAVRVEEHPLEYRNFEGTIPKGQYGGGTVMLWDEGFWEPYGNVSEGLLKGEMKFVLKGRRLKGKWALIRWKARSDEKSENWLLLKEKDEYANTEDAISEWTTSIRTGRTMEEIQRGEDEKIKRNPFSKADVQLAKLVQKVPGGEEWLYELKYDGYRILAFVEGNSARLLTRNGKDYIGRFPDIAASLIDLSAGRAVVLDGEMVITDLSGKTDFQALQNYMKNPRTKNLTYIVFDILALDGKDLRKEPLIYRKQTLETFMKDAPKNLYYSRYVRGHGKESFDAACQTHMEGVVGKKADAIYSGTRNGDWIKLKCDKRQEFVIGGYTISDKRVNGISSLLLGVYEGKELIYAGRAGTGIGEADRKMLEEKFQGLQRTEAPFKLAPEPRAKEKIIWLEPLLAAEIKFAEWTEEDLLRQASFKGIRTDKDPKEIKREKASEEIMLQSPAAEGEISMETNQDSMIIEGIKISSPDKVLFNDPVITKAEVIQYYAKISERMMPYVHRRVLSIVRCPKGISQACFFKKHPGAGSKGVITIPITNSDGETEDYFYIEDTAGLISEVQMGTLEFHTWGSRIDELEKPDMMVFDLDPDEGMELSRIRQGVRDMRNILSELSLNSYLKTSGGKGYHVVVPLKPVADWDTFHDFAKGVAQVMEQKWPDRYTSNVRKAKRSGKIFIDWIRNGRGATSVAPYSIRARKGAGVSMPIAWDELDTVAPDGIHMPEALSRMSSLDPWEDFFRNDQRLK
>CP035281.1|QAT42220.1|575467_576235_+|SDR-family-oxidoreductase
MRLDGKVVVITGVSSGMGRATAELFAAEGAKVIGMARRKEMLDTLKKDIEAKGGVFVPYQGDVSIEEQAEGVIDFAVAKFGKLDVAFFNAGLADGNYPIAEVTDELWKKIMGINLDGVFWGTRRAVQIMLDQGYGNIITTASVGGLHGGVAGTAYVTAKHAVIGMTKNIAYYYGRKGIRANAICPGGVRSEIVTKGVGFEHSSQYGNEMQKLGLDTSNGMGEPEDIANLALFLAGEDSKFVNGAALVIDGGWTAY
>CP035281.1|QAT42221.1|576536_578597_+|PAS-domain-containing-protein
MGKNIVIAGYRKQVNENYANQLKSLFGDDLQIQFLEIGKPMLREIKEESIVLIPSYDVYQSVEPCLPSSANIIFIRSTLQTECLKQVRKLLETRVVLVAGDNMELALELIKNLLQFGVKRFQLKPADLSDPKLFKDQVVLVSGIPQEEIPDARQVVGVKLPMLDLPTILDVGLKLPRKDLLTRKNITQDYIPFLPQHHGIIWSLENSNTFNSSIKILLSVIDGAVISVTQSGKVRACNKRIESFFGISASEAMGKNGITLFPQIPFQKVISESKSIVESLLTINDEPMIVTVKPIINSGKYYGAIAVIKKFNDEERRHHKLRTLSVGKGHRAKYKFEDIVGSSSVMKQCRGIARRMAVSNSSILITGETGTGKEMFAQAIHQASERKEYQFVAVNCGAIPESLLESELFGYEEGAFTGARKGGKLGLFELAHKGTLFLDEISEMPLLLQKRLLRVLQEREVVRLGGDSVIHVDVRIIAATNVDLQAMTKRGEFREDLYYRLSVLPLVIPALRERKGDVRLLAEFFKQDLGGNFELTEEAWDTLEQYKWPGNVRELRNYVEYFTNLSSIKVGVEELSHVIPLQGTVESVPVVTKSIESEKTPETGTAIIDEKNIFILSMLKEGLEKGRRLGRRSLSDSARKQGLFLGEQEIRKILGQLEKRGLVEIRPNKAGTVITPKGLEVLAKMK
>CP035281.1|QAT42222.1|578856_580629_+|indolepyruvate-ferredoxin-oxidoreductase-subunit-alpha
MRKIMTGNEAVARGAYEAGLEFASAYPGTPSTEILENIVHYKDVIYCEWAPNEKVALEAAIGASVAGARSMAAMKHVGVNVAADPLFTFAYTGVTGGCVLVSADDPGMHSSQNEQDNRNYATAARVLMLEPSDSQESKDFMKLGLELSEKFDTPVLLRMTTRVCHSKSLVTLEDREPRKIIPYEHNIAKYVATPANGKVLRRKLIDRLKNMEAYSNTTEINRAEYNDTEIGVISSGVAYQYAREVFGDKASYLKLGMTFPMPMAKIKEFASKVKKIYVIEEMDPYIENHLKMAGIPCIGKEVIPEMDELNTDIVRQAVFGTEMKTLDSEMEAVVRPPTLCAGCPHRGIFYTLSKKKNLMVTGDIGCYTLGSAPPLSAMHTCFCMGGSVSTGHGASTVLKRAGSDLKVAAVIGDSTFFHSGITSLIDVVYNKGNSVTIILDNRITAMTGHQQNPGTGYTLMGEPATEVDIPMLCKAIGVKDENLFIINPLELDKSGEIVDKALATDEPTVIITKWPCILKKFTDQDKAEFDLSPKKCEIDQEKCTKCRMCVRTGCPAINSGEMVEIDPQSCTGCGVCRQVCKFGAIKEVKR
>CP035281.1|QAT42223.1|580625_581198_+|indolepyruvate-oxidoreductase-subunit-beta
MNSVKNILLVGVGGQGTILASKILSEGLVEAGYDVKMSEIHGMSQRGGNVSTQIRFGEKVYSPIIGKGEADVIVAFEKMEALRWIGYLKEGGKMVVNDFEIPSAPIQQGKAKYPEGILEELSSKADVFVFKAADIAAQVGNMRTMNIVLFGALVKAMNLPGIEWEQVIKKNVKPEFAEINVKAFQAGYKL

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Crispr_ID: CP035281_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP035281_3

2048267-2053735

TypeI

Consensus_repeat	Method
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	PILER-CR
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CRISPRCasFinder
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CRT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	PILER-CR

81 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of CP035281_3

>merge|CP035281|3|2048267-2053735|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
ATTTCAATCCACACTCCCCTTGCGAGGAGCGACGTCTTTATCATCCTCATAGATTCCCATCAGCTCTATTTCAATCCACACTCCCCTTGCGAGGAGCGACGATCATCCCCAGCTAAATATAGCAGTTTGCTTTTTTCATTTCAATCCACACTCCCCTTGCGAGGAGCGACACACACTCAAAATGTGAAAAGAGGTGCTAAAGATGATTTCAATCCACACTCCCCTTGCGAGGAGCGACTTGCAATTGGTGTTGCTAATATGGGAGATGGTACATTTCAATCCACACTCCCCTTGCGAGGAGCGACTCACCTCTTGGTTCCATGTTATGCCGATAAAAATATATTTCAATCCACACTCCCCTTGCGAGGAGCGACTACAAAAGTCATTTGTAAATTTATGTGATTTAAAATTTCAATCCACACTCCCCTTGCGAGGAGCGACTTTTAATATATTTGTCGTTGGTGCATCCAGTTTGTATTTCAATCCACACTCCCCTTGCGAGGAGCGACGTTTATTCGCTTGGTTAGTGCTTCAAAGTCTGAAGTATTTCAATCCACACTCCCCTTGCGAGGAGCGACGGATAACTTATGATTATCTGTGGATAAGTATAGTATTTCAATCCACACTCCCCTTGCGAGGAGCGACTAGAATCCTCCATAGACAACGGAGTACCGCAACCATTTCAATCCACACTCCCCTTGCGAGGAGCGACCTATGCAGTTTATTCCGCAACAAGGCGTATACGAATTTCAATCCACACTCCCCTTGCGAGGAGCGACAGTTCTGGATGTGTAATTGATAAACCTGTCAGTATTTCAATCCACACTCCCCTTGCGAGGAGCGACTCGTAAGACTTCACCAACTTGCTCCATGTTATGACATTTCAATCCACACTCCCCTTGCGAGGAGCGACTAATTCTTCGGCTTGCTTAATCCATTGTAAAAAGATTTCAATCCACACTCCCCTTGCGAGGAGCGACGTAATTCTTCGGCTTGCTTAATCCATTGTAAAAAGATTTCAATCCACACTCCCCTTGCGAGGAGCGACCGTAAGACTTCACCAACTTGCTCCATGTTATAACATTTCAATCCACACTCCCCTTGCGAGGAGCGACGAAACTAGATAAACACAATCTAAAATGGACATTTATTTCAATCCACACTCCCCTTGCGAGGAGCGACTACAAGATACAGAAGACAATATAATTCAAGTTGATTTCAATCCACACTCCCCTTGCGAGGAGCGACTGTAAACAAAATATAATTTTAATCAAAGTAAATATTTCAATCCACACTCCCCTTGCGAGGAGCGACATAATACCATAAATAAAAACTATTGTTATAATAATTTCAATCCACACTCCCCTTGCGAGGAGCGACAATTCTTCGGCTTGCTTAATCCATTGTAAAAAGATTTCAATCCACACTCCCCTTGCGAGGAGCGACCTTTTAATATTTTGTAATGTTGAATTTGAACAGATTTCAATCCACACTCCCCTTGCGAGGAGCGACGAGCCTTCTTGTGGTATTGGTAATATTGCAGATATTTCAATCCACACTCCCCTTGCGAGGAGCGACACTAAGAGAACTAACTCCGTGATTCTATCAATACATTTCAATCCACACTCCCCTTGCGAGGAGCGACTTACATTCATGTTTATACCTCGTCATTCTCATTATTTCAATCCACACTCCCCTTGCGAGGAGCGACAGTCGATGCTCCGAAGTCTGTTAGTTTAAAGCCATTTCAATCCACACTCCCCTTGCGAGGAGCGACATCGCCGGACTTGTGTTCTTTTCTTCGTTACTACTATTTCAATCCACACTCCCCTTGCGAGGAGCGACTTACGGCTAATGAATAACACGCCCGTTTCATACATTTCAATCCACACTCCCCTTGCGAGGAGCGACACGATGTATAATTTTATTTTAAATATGTGGGTTATATTTCAATCCACACTCCCCTTGCGAGGAGCGACGGTATCGTTCATTTAAAGGGGCGCATTTCGGGAGATTTCAATCCACACTCCCCTTGCGAGGAGCGACATATGGATCCTAAACTGGACGGGGAGGTCATAGAATTTCAATCCACACTCCCCTTGCGAGGAGCGACATTATAGAGGAAGAGAGCGACCGACCGGAGCAAAGATTTCAATCCACACTCCCCTTGCGAGGAGCGACAAGTTGCGTCGGTTTCTTCCCCGTCTATTCGTAAATTTCAATCCACACTCCCCTTGCGAGGAGCGACACAAATTCATTTATGATTGACGTTACCGCAATCGATTTCAATCCACACTCCCCTTGCGAGGAGCGACGGATTTTTTAATACTTCCCCCGATGGTTGGCTTATTTCAATCCACACTCCCCTTGCGAGGAGCGACTCGGACTAATGGCTATTACATTTATTGTTTTCGCATTTCAATCCACACTCCCCTTGCGAGGAGCGACTGACGCGCACCCTATGTCTGCTATCACTAATTTAATTTCAATCCACACTCCCCTTGCGAGGAGCGACCTTTACTTGTGGCACTAAAGTTTTTAGTGGAAAGTATTTCAATCCACACTCCCCTTGCGAGGAGCGACGGTATCGTTCATTTAAAGGGGCGCATTTCGGGAGATTTCAATCCACACTCCCCTTGCGAGGAGCGACGTGTTTACGCGCCGTAACTGACGCGATAAGACCATTTCAATCCACACTCCCCTTGCGAGGAGCGACTCTGTTGCGCAGCTGCACGCACATCTGGATTGGTATTTCAATCCACACTCCCCTTGCGAGGAGCGACAAAGCATAATTTATTGCCATCTGCTTCACTGACTGATTTCAATCCACACTCCCCTTGCGAGGAGCGACTATATAGAAAGAGGTGTCCAAAATGACTGTGAATTTCAATCCACACTCCCCTTGCGAGGAGCGACATTGTTACCTTAATTCAACAGGAAGTTGAAAGAATTTCAATCCACACTCCCCTTGCGAGGAGCGACTGTATCATCTTGTTGGCTTTTCATAACAAAGGTATTTCAATCCACACTCCCCTTGCGAGGAGCGACAAAATAAAGCCGTAGATAGCTTTTTAAACATGTGATTTCAATCCACACTCCCCTTGCGAGGAGCGACACAAAGGATTCTGGTTGTAGTGCTACTTCATCAAAATTTCAATCCACACTCCCCTTGCGAGGAGCGACGAGGAAAATTTAAAAGCACTTGGAGCAATTCCAATATTTCAATCCACACTCCCCTTGCGAGGAGCGACCTTGGCTGTATAGGCTGCCCTATGAGTACAAAGGCATTTCAATCCACACTCCCCTTGCGAGGAGCGACAGACCTATAACCTTTCGAGAGGCCAGCGACTTTATATTTCAATCCACACTCCCCTTGCGAGGAGCGACAGAACCATTAGTCGCACAGCAGATTATAGATACTATTTCAATCCACACTCCCCTTGCGAGGAGCGACTTTAGCCATACGGCTCACCTCCTTTTATGTAATATTTCAATCCACACTCCCCTTGCGAGGAGCGACCATCTTCATTTGCAATTCTTCTTAATTCTCTTATATTTCAATCCACACTCCCCTTGCGAGGAGCGACCTGTATTGTTTTGAATTATTTTTGTATAAACAAATTTCAATCCACACTCCCCTTGCGAGGAGCGACATATTAGTCATCATTACTTTAATTAATTCTATAATTTCAATCCACACTCCCCTTGCGAGGAGCGACTAAAATCACCTTCCCAATAACCTTTATTGTAACCATTTCAATCCACACTCCCCTTGCGAGGAGCGACACCTAACCTCCATTCTAAATAATAAAAGGGAGGATTTCAATCCACACTCCCCTTGCGAGGAGCGACTCTATTAAAGTAGCATTATAAGCAAGCAATTCTTATTTCAATCCACACTCCCCTTGCGAGGAGCGACTTCCTGCAGCTCCGTCATATCCACCCCCGACTAAATTTCAATCCACACTCCCCTTGCGAGGAGCGACACCATATATTTTGTATAAATTGTATTTGTGGCAATTTCAATCCACACTCCCCTTGCGAGGAGCGACATTTATAAATTCATCCACCGAATCTATTTCAATTGATTTCAATCCACACTCCCCTTGCGAGGAGCGACTAGTGATGAGCACACAAAATATCATACAGCTCTAAATTTCAATCCACACTCCCCTTGCGAGGAGCGACAATTATAAACCATCAGGAAAAATATGTAAACAATATTTCAATCCACACTCCCCTTGCGAGGAGCGACCTAATTTCACCTCACTTTTAATCATTATAACATAATTTCAATCCACACTCCCCTTGCGAGGAGCGACGCAATCTCCTGCACCTGTTCTAATCTAGTGCAAGATTTCAATCCACACTCCCCTTGCGAGGAGCGACCTTTTAAGAGAAATTAACGATTTAACACAAACTATTTCAATCCACACTCCCCTTGCGAGGAGCGACGCGGCTTTCTCTTGTAGGGCTTGGATGGCTAAGCTATTTCAATCCACACTCCCCTTGCGAGGAGCGACTATAATGTATTTAGATAAGTTCGATAAGTTCATGATTTCAATCCACACTCCCCTTGCGAGGAGCGACGTAGTGGAAAATTGCAATTAATCCCAAATAAAATTATTTCAATCCACACTCCCCTTGCGAGGAGCGACGCCTACAAGGCTATCCTCTTTATACACTCCAACAATTTCAATCCACACTCCCCTTGCGAGGAGCGACAAAGCAATAATTAAAGATAAAGAATGTATTTTTAAATTTCAATCCACACTCCCCTTGCGAGGAGCGACACTATCAACTAATAAACCACTTTCTGTTCCAATAATTTCAATCCACACTCCCCTTGCGAGGAGCGACATTAGCTTTCATAGCTGAAGTCAACATATCTAATATTTCAATCCACACTCCCCTTGCGAGGAGCGACCTATACACCACTTAACAATATATTTACTACTATGATATTTCAATCCACACTCCCCTTGCGAGGAGCGACTCCTTTAGAGCGTGACCAATAAGTAATTTTACATATTTCAATCCACACTCCCCTTGCGAGGAGCGACATATAATACACCTTGTAAATGGTCGTATTCATGCTATTTCAATCCACACTCCCCTTGCGAGGAGCGACGTAGACTGGATTACAGAAATTGCAGGGGAACAAATTTCAATCCACACTCCCCTTGCGAGGAGCGACCTTTTCTAGTTCGATTTCTCTTTCAAGCTTTTCAATTTCAATCCACACTCCCCTTGCGAGGAGCGACACGTATCTCAATCTCTGTTACAACTTCCATTACATATTTCAATCCACACTCCCCTTGCGAGGAGCGACTTCATCTAATGTTTCATTTAAACTGTTCCCACTTTATTTCAATCCACACTCCCCTTGCGAGGAGCGACCATTAGCATATTGTCAATCTTTAACATATATGGATTATTTCAATCCACACTCCCCTTGCGAGGAGCGAC

>CP035281|3|1|2048267-2049246|PILER-CR
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GTCTTTATCATCCTCATAGATTCCCATCAGCTCT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GATCATCCCCAGCTAAATATAGCAGTTTGCTTTTTTC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACACACTCAAAATGTGAAAAGAGGTGCTAAAGATG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTGCAATTGGTGTTGCTAATATGGGAGATGGTAC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCACCTCTTGGTTCCATGTTATGCCGATAAAAATAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TACAAAAGTCATTTGTAAATTTATGTGATTTAAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTTTAATATATTTGTCGTTGGTGCATCCAGTTTGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GTTTATTCGCTTGGTTAGTGCTTCAAAGTCTGAAGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GGATAACTTATGATTATCTGTGGATAAGTATAGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TAGAATCCTCCATAGACAACGGAGTACCGCAACC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTATGCAGTTTATTCCGCAACAAGGCGTATACGA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AGTTCTGGATGTGTAATTGATAAACCTGTCAGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCGTAAGACTTCACCAACTTGCTCCATGTTATGAC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TAATTCTTCGGCTTGCTTAATCCATTGTAAAAAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGACGTAATTCTTCGGCTTGCTTAATCCATTGTAAAAAGATTTCAATCCACACTCCCCTTGCGAGGAGCGACCGTAAGACTTCACCAACTTGCTCCATGTTATAACATTTCAATCCACACTCCCCTTGCGAGGAGCGACGAAACTAGATAAACACAATCTAAAATGGACATTTATTTCAATCCACACTCCCCTTGCGAGGAGCGACTACAAGATACAGAAGACAATATAATTCAAGTTGATTTCAATCCACACTCCCCTTGCGAGGAGCGACTGTAAACAAAATATAATTTTAATCAAAGTAAATATTTCAATCCACACTCCCCTTGCGAGGAGCGACATAATACCATAAATAAAAACTATTGTTATAATAATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AATTCTTCGGCTTGCTTAATCCATTGTAAAAAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTTTTAATATTTTGTAATGTTGAATTTGAACAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GAGCCTTCTTGTGGTATTGGTAATATTGCAGAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACTAAGAGAACTAACTCCGTGATTCTATCAATAC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTACATTCATGTTTATACCTCGTCATTCTCATT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AGTCGATGCTCCGAAGTCTGTTAGTTTAAAGCC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATCGCCGGACTTGTGTTCTTTTCTTCGTTACTACT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTACGGCTAATGAATAACACGCCCGTTTCATAC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACGATGTATAATTTTATTTTAAATATGTGGGTTAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GGTATCGTTCATTTAAAGGGGCGCATTTCGGGAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATATGGATCCTAAACTGGACGGGGAGGTCATAGA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATTATAGAGGAAGAGAGCGACCGACCGGAGCAAAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AAGTTGCGTCGGTTTCTTCCCCGTCTATTCGTAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACAAATTCATTTATGATTGACGTTACCGCAATCG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GGATTTTTTAATACTTCCCCCGATGGTTGGCTT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCGGACTAATGGCTATTACATTTATTGTTTTCGC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TGACGCGCACCCTATGTCTGCTATCACTAATTTA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTTTACTTGTGGCACTAAAGTTTTTAGTGGAAAGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GGTATCGTTCATTTAAAGGGGCGCATTTCGGGAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GTGTTTACGCGCCGTAACTGACGCGATAAGACC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCTGTTGCGCAGCTGCACGCACATCTGGATTGGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AAAGCATAATTTATTGCCATCTGCTTCACTGACTG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TATATAGAAAGAGGTGTCCAAAATGACTGTGA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATTGTTACCTTAATTCAACAGGAAGTTGAAAGA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TGTATCATCTTGTTGGCTTTTCATAACAAAGGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AAAATAAAGCCGTAGATAGCTTTTTAAACATGTG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACAAAGGATTCTGGTTGTAGTGCTACTTCATCAAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GAGGAAAATTTAAAAGCACTTGGAGCAATTCCAAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTTGGCTGTATAGGCTGCCCTATGAGTACAAAGGC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AGACCTATAACCTTTCGAGAGGCCAGCGACTTTAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AGAACCATTAGTCGCACAGCAGATTATAGATACT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTTAGCCATACGGCTCACCTCCTTTTATGTAAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CATCTTCATTTGCAATTCTTCTTAATTCTCTTAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTGTATTGTTTTGAATTATTTTTGTATAAACAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATATTAGTCATCATTACTTTAATTAATTCTATA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TAAAATCACCTTCCCAATAACCTTTATTGTAACC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACCTAACCTCCATTCTAAATAATAAAAGGGAGG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCTATTAAAGTAGCATTATAAGCAAGCAATTCTT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTCCTGCAGCTCCGTCATATCCACCCCCGACTAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACCATATATTTTGTATAAATTGTATTTGTGGCA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATTTATAAATTCATCCACCGAATCTATTTCAATTG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TAGTGATGAGCACACAAAATATCATACAGCTCTAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AATTATAAACCATCAGGAAAAATATGTAAACAAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTAATTTCACCTCACTTTTAATCATTATAACATA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GCAATCTCCTGCACCTGTTCTAATCTAGTGCAAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTTTTAAGAGAAATTAACGATTTAACACAAACT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GCGGCTTTCTCTTGTAGGGCTTGGATGGCTAAGCT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TATAATGTATTTAGATAAGTTCGATAAGTTCATG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GTAGTGGAAAATTGCAATTAATCCCAAATAAAATT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GCCTACAAGGCTATCCTCTTTATACACTCCAACA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AAAGCAATAATTAAAGATAAAGAATGTATTTTTAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACTATCAACTAATAAACCACTTTCTGTTCCAATA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATTAGCTTTCATAGCTGAAGTCAACATATCTAAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTATACACCACTTAACAATATATTTACTACTATGAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCCTTTAGAGCGTGACCAATAAGTAATTTTACAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATATAATACACCTTGTAAATGGTCGTATTCATGCT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GTAGACTGGATTACAGAAATTGCAGGGGAACAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTTTTCTAGTTCGATTTCTCTTTCAAGCTTTTCA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACGTATCTCAATCTCTGTTACAACTTCCATTACAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTCATCTAATGTTTCATTTAAACTGTTCCCACTTT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CATTAGCATATTGTCAATCTTTAACATATATGGATT


>CP035281|3|3|2048267-2053735|CRISPRCasFinder
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GTCTTTATCATCCTCATAGATTCCCATCAGCTCT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GATCATCCCCAGCTAAATATAGCAGTTTGCTTTTTTC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACACACTCAAAATGTGAAAAGAGGTGCTAAAGATG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTGCAATTGGTGTTGCTAATATGGGAGATGGTAC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCACCTCTTGGTTCCATGTTATGCCGATAAAAATAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TACAAAAGTCATTTGTAAATTTATGTGATTTAAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTTTAATATATTTGTCGTTGGTGCATCCAGTTTGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GTTTATTCGCTTGGTTAGTGCTTCAAAGTCTGAAGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GGATAACTTATGATTATCTGTGGATAAGTATAGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TAGAATCCTCCATAGACAACGGAGTACCGCAACC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTATGCAGTTTATTCCGCAACAAGGCGTATACGA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AGTTCTGGATGTGTAATTGATAAACCTGTCAGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCGTAAGACTTCACCAACTTGCTCCATGTTATGAC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TAATTCTTCGGCTTGCTTAATCCATTGTAAAAAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GTAATTCTTCGGCTTGCTTAATCCATTGTAAAAAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CGTAAGACTTCACCAACTTGCTCCATGTTATAAC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GAAACTAGATAAACACAATCTAAAATGGACATTT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TACAAGATACAGAAGACAATATAATTCAAGTTG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TGTAAACAAAATATAATTTTAATCAAAGTAAAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATAATACCATAAATAAAAACTATTGTTATAATA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AATTCTTCGGCTTGCTTAATCCATTGTAAAAAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTTTTAATATTTTGTAATGTTGAATTTGAACAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GAGCCTTCTTGTGGTATTGGTAATATTGCAGAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACTAAGAGAACTAACTCCGTGATTCTATCAATAC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTACATTCATGTTTATACCTCGTCATTCTCATT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AGTCGATGCTCCGAAGTCTGTTAGTTTAAAGCC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATCGCCGGACTTGTGTTCTTTTCTTCGTTACTACT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTACGGCTAATGAATAACACGCCCGTTTCATAC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACGATGTATAATTTTATTTTAAATATGTGGGTTAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GGTATCGTTCATTTAAAGGGGCGCATTTCGGGAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATATGGATCCTAAACTGGACGGGGAGGTCATAGA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATTATAGAGGAAGAGAGCGACCGACCGGAGCAAAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AAGTTGCGTCGGTTTCTTCCCCGTCTATTCGTAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACAAATTCATTTATGATTGACGTTACCGCAATCG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GGATTTTTTAATACTTCCCCCGATGGTTGGCTT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCGGACTAATGGCTATTACATTTATTGTTTTCGC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TGACGCGCACCCTATGTCTGCTATCACTAATTTA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTTTACTTGTGGCACTAAAGTTTTTAGTGGAAAGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GGTATCGTTCATTTAAAGGGGCGCATTTCGGGAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GTGTTTACGCGCCGTAACTGACGCGATAAGACC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCTGTTGCGCAGCTGCACGCACATCTGGATTGGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AAAGCATAATTTATTGCCATCTGCTTCACTGACTG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TATATAGAAAGAGGTGTCCAAAATGACTGTGA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATTGTTACCTTAATTCAACAGGAAGTTGAAAGA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TGTATCATCTTGTTGGCTTTTCATAACAAAGGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AAAATAAAGCCGTAGATAGCTTTTTAAACATGTG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACAAAGGATTCTGGTTGTAGTGCTACTTCATCAAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GAGGAAAATTTAAAAGCACTTGGAGCAATTCCAAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTTGGCTGTATAGGCTGCCCTATGAGTACAAAGGC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AGACCTATAACCTTTCGAGAGGCCAGCGACTTTAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AGAACCATTAGTCGCACAGCAGATTATAGATACT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTTAGCCATACGGCTCACCTCCTTTTATGTAAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CATCTTCATTTGCAATTCTTCTTAATTCTCTTAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTGTATTGTTTTGAATTATTTTTGTATAAACAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATATTAGTCATCATTACTTTAATTAATTCTATA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TAAAATCACCTTCCCAATAACCTTTATTGTAACC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACCTAACCTCCATTCTAAATAATAAAAGGGAGG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCTATTAAAGTAGCATTATAAGCAAGCAATTCTT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTCCTGCAGCTCCGTCATATCCACCCCCGACTAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACCATATATTTTGTATAAATTGTATTTGTGGCA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATTTATAAATTCATCCACCGAATCTATTTCAATTG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TAGTGATGAGCACACAAAATATCATACAGCTCTAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AATTATAAACCATCAGGAAAAATATGTAAACAAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTAATTTCACCTCACTTTTAATCATTATAACATA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GCAATCTCCTGCACCTGTTCTAATCTAGTGCAAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTTTTAAGAGAAATTAACGATTTAACACAAACT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GCGGCTTTCTCTTGTAGGGCTTGGATGGCTAAGCT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TATAATGTATTTAGATAAGTTCGATAAGTTCATG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GTAGTGGAAAATTGCAATTAATCCCAAATAAAATT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GCCTACAAGGCTATCCTCTTTATACACTCCAACA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AAAGCAATAATTAAAGATAAAGAATGTATTTTTAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACTATCAACTAATAAACCACTTTCTGTTCCAATA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATTAGCTTTCATAGCTGAAGTCAACATATCTAAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTATACACCACTTAACAATATATTTACTACTATGAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCCTTTAGAGCGTGACCAATAAGTAATTTTACAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATATAATACACCTTGTAAATGGTCGTATTCATGCT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GTAGACTGGATTACAGAAATTGCAGGGGAACAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTTTTCTAGTTCGATTTCTCTTTCAAGCTTTTCA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACGTATCTCAATCTCTGTTACAACTTCCATTACAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTCATCTAATGTTTCATTTAAACTGTTCCCACTTT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CATTAGCATATTGTCAATCTTTAACATATATGGATT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC

>CP035281|3|1|2048267-2053735|CRT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GTCTTTATCATCCTCATAGATTCCCATCAGCTCT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GATCATCCCCAGCTAAATATAGCAGTTTGCTTTTTTC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACACACTCAAAATGTGAAAAGAGGTGCTAAAGATG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTGCAATTGGTGTTGCTAATATGGGAGATGGTAC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCACCTCTTGGTTCCATGTTATGCCGATAAAAATAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TACAAAAGTCATTTGTAAATTTATGTGATTTAAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTTTAATATATTTGTCGTTGGTGCATCCAGTTTGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GTTTATTCGCTTGGTTAGTGCTTCAAAGTCTGAAGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GGATAACTTATGATTATCTGTGGATAAGTATAGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TAGAATCCTCCATAGACAACGGAGTACCGCAACC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTATGCAGTTTATTCCGCAACAAGGCGTATACGA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AGTTCTGGATGTGTAATTGATAAACCTGTCAGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCGTAAGACTTCACCAACTTGCTCCATGTTATGAC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TAATTCTTCGGCTTGCTTAATCCATTGTAAAAAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GTAATTCTTCGGCTTGCTTAATCCATTGTAAAAAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CGTAAGACTTCACCAACTTGCTCCATGTTATAAC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GAAACTAGATAAACACAATCTAAAATGGACATTT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TACAAGATACAGAAGACAATATAATTCAAGTTG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TGTAAACAAAATATAATTTTAATCAAAGTAAAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATAATACCATAAATAAAAACTATTGTTATAATA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AATTCTTCGGCTTGCTTAATCCATTGTAAAAAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTTTTAATATTTTGTAATGTTGAATTTGAACAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GAGCCTTCTTGTGGTATTGGTAATATTGCAGAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACTAAGAGAACTAACTCCGTGATTCTATCAATAC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTACATTCATGTTTATACCTCGTCATTCTCATT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AGTCGATGCTCCGAAGTCTGTTAGTTTAAAGCC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATCGCCGGACTTGTGTTCTTTTCTTCGTTACTACT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTACGGCTAATGAATAACACGCCCGTTTCATAC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACGATGTATAATTTTATTTTAAATATGTGGGTTAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GGTATCGTTCATTTAAAGGGGCGCATTTCGGGAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATATGGATCCTAAACTGGACGGGGAGGTCATAGA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATTATAGAGGAAGAGAGCGACCGACCGGAGCAAAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AAGTTGCGTCGGTTTCTTCCCCGTCTATTCGTAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACAAATTCATTTATGATTGACGTTACCGCAATCG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GGATTTTTTAATACTTCCCCCGATGGTTGGCTT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCGGACTAATGGCTATTACATTTATTGTTTTCGC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TGACGCGCACCCTATGTCTGCTATCACTAATTTA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTTTACTTGTGGCACTAAAGTTTTTAGTGGAAAGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GGTATCGTTCATTTAAAGGGGCGCATTTCGGGAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GTGTTTACGCGCCGTAACTGACGCGATAAGACC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCTGTTGCGCAGCTGCACGCACATCTGGATTGGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AAAGCATAATTTATTGCCATCTGCTTCACTGACTG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TATATAGAAAGAGGTGTCCAAAATGACTGTGA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATTGTTACCTTAATTCAACAGGAAGTTGAAAGA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TGTATCATCTTGTTGGCTTTTCATAACAAAGGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AAAATAAAGCCGTAGATAGCTTTTTAAACATGTG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACAAAGGATTCTGGTTGTAGTGCTACTTCATCAAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GAGGAAAATTTAAAAGCACTTGGAGCAATTCCAAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTTGGCTGTATAGGCTGCCCTATGAGTACAAAGGC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AGACCTATAACCTTTCGAGAGGCCAGCGACTTTAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AGAACCATTAGTCGCACAGCAGATTATAGATACT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTTAGCCATACGGCTCACCTCCTTTTATGTAAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CATCTTCATTTGCAATTCTTCTTAATTCTCTTAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTGTATTGTTTTGAATTATTTTTGTATAAACAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATATTAGTCATCATTACTTTAATTAATTCTATA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TAAAATCACCTTCCCAATAACCTTTATTGTAACC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACCTAACCTCCATTCTAAATAATAAAAGGGAGG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCTATTAAAGTAGCATTATAAGCAAGCAATTCTT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTCCTGCAGCTCCGTCATATCCACCCCCGACTAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACCATATATTTTGTATAAATTGTATTTGTGGCA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATTTATAAATTCATCCACCGAATCTATTTCAATTG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TAGTGATGAGCACACAAAATATCATACAGCTCTAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AATTATAAACCATCAGGAAAAATATGTAAACAAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTAATTTCACCTCACTTTTAATCATTATAACATA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GCAATCTCCTGCACCTGTTCTAATCTAGTGCAAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTTTTAAGAGAAATTAACGATTTAACACAAACT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GCGGCTTTCTCTTGTAGGGCTTGGATGGCTAAGCT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TATAATGTATTTAGATAAGTTCGATAAGTTCATG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GTAGTGGAAAATTGCAATTAATCCCAAATAAAATT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GCCTACAAGGCTATCCTCTTTATACACTCCAACA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AAAGCAATAATTAAAGATAAAGAATGTATTTTTAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACTATCAACTAATAAACCACTTTCTGTTCCAATA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATTAGCTTTCATAGCTGAAGTCAACATATCTAAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTATACACCACTTAACAATATATTTACTACTATGAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCCTTTAGAGCGTGACCAATAAGTAATTTTACAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATATAATACACCTTGTAAATGGTCGTATTCATGCT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GTAGACTGGATTACAGAAATTGCAGGGGAACAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTTTTCTAGTTCGATTTCTCTTTCAAGCTTTTCA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACGTATCTCAATCTCTGTTACAACTTCCATTACAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTCATCTAATGTTTCATTTAAACTGTTCCCACTTT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CATTAGCATATTGTCAATCTTTAACATATATGGATT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC

>CP035281|3|2|2049614-2053735|PILER-CR
	GTCTTTATCATCCTCATAGATTCCCATCAGCTCT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GATCATCCCCAGCTAAATATAGCAGTTTGCTTTTTTC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACACACTCAAAATGTGAAAAGAGGTGCTAAAGATG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTGCAATTGGTGTTGCTAATATGGGAGATGGTAC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCACCTCTTGGTTCCATGTTATGCCGATAAAAATAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TACAAAAGTCATTTGTAAATTTATGTGATTTAAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTTTAATATATTTGTCGTTGGTGCATCCAGTTTGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GTTTATTCGCTTGGTTAGTGCTTCAAAGTCTGAAGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GGATAACTTATGATTATCTGTGGATAAGTATAGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TAGAATCCTCCATAGACAACGGAGTACCGCAACC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTATGCAGTTTATTCCGCAACAAGGCGTATACGA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AGTTCTGGATGTGTAATTGATAAACCTGTCAGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCGTAAGACTTCACCAACTTGCTCCATGTTATGAC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TAATTCTTCGGCTTGCTTAATCCATTGTAAAAAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGACGTAATTCTTCGGCTTGCTTAATCCATTGTAAAAAGATTTCAATCCACACTCCCCTTGCGAGGAGCGACCGTAAGACTTCACCAACTTGCTCCATGTTATAACATTTCAATCCACACTCCCCTTGCGAGGAGCGACGAAACTAGATAAACACAATCTAAAATGGACATTTATTTCAATCCACACTCCCCTTGCGAGGAGCGACTACAAGATACAGAAGACAATATAATTCAAGTTGATTTCAATCCACACTCCCCTTGCGAGGAGCGACTGTAAACAAAATATAATTTTAATCAAAGTAAATATTTCAATCCACACTCCCCTTGCGAGGAGCGACATAATACCATAAATAAAAACTATTGTTATAATAATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AATTCTTCGGCTTGCTTAATCCATTGTAAAAAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTTTTAATATTTTGTAATGTTGAATTTGAACAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GAGCCTTCTTGTGGTATTGGTAATATTGCAGAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACTAAGAGAACTAACTCCGTGATTCTATCAATAC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTACATTCATGTTTATACCTCGTCATTCTCATT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AGTCGATGCTCCGAAGTCTGTTAGTTTAAAGCC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATCGCCGGACTTGTGTTCTTTTCTTCGTTACTACT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTACGGCTAATGAATAACACGCCCGTTTCATAC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACGATGTATAATTTTATTTTAAATATGTGGGTTAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GGTATCGTTCATTTAAAGGGGCGCATTTCGGGAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATATGGATCCTAAACTGGACGGGGAGGTCATAGA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATTATAGAGGAAGAGAGCGACCGACCGGAGCAAAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AAGTTGCGTCGGTTTCTTCCCCGTCTATTCGTAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACAAATTCATTTATGATTGACGTTACCGCAATCG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GGATTTTTTAATACTTCCCCCGATGGTTGGCTT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCGGACTAATGGCTATTACATTTATTGTTTTCGC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TGACGCGCACCCTATGTCTGCTATCACTAATTTA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTTTACTTGTGGCACTAAAGTTTTTAGTGGAAAGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GGTATCGTTCATTTAAAGGGGCGCATTTCGGGAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GTGTTTACGCGCCGTAACTGACGCGATAAGACC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCTGTTGCGCAGCTGCACGCACATCTGGATTGGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AAAGCATAATTTATTGCCATCTGCTTCACTGACTG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TATATAGAAAGAGGTGTCCAAAATGACTGTGA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATTGTTACCTTAATTCAACAGGAAGTTGAAAGA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TGTATCATCTTGTTGGCTTTTCATAACAAAGGT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AAAATAAAGCCGTAGATAGCTTTTTAAACATGTG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACAAAGGATTCTGGTTGTAGTGCTACTTCATCAAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GAGGAAAATTTAAAAGCACTTGGAGCAATTCCAAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTTGGCTGTATAGGCTGCCCTATGAGTACAAAGGC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AGACCTATAACCTTTCGAGAGGCCAGCGACTTTAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AGAACCATTAGTCGCACAGCAGATTATAGATACT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTTAGCCATACGGCTCACCTCCTTTTATGTAAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CATCTTCATTTGCAATTCTTCTTAATTCTCTTAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTGTATTGTTTTGAATTATTTTTGTATAAACAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATATTAGTCATCATTACTTTAATTAATTCTATA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TAAAATCACCTTCCCAATAACCTTTATTGTAACC
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACCTAACCTCCATTCTAAATAATAAAAGGGAGG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCTATTAAAGTAGCATTATAAGCAAGCAATTCTT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTCCTGCAGCTCCGTCATATCCACCCCCGACTAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACCATATATTTTGTATAAATTGTATTTGTGGCA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATTTATAAATTCATCCACCGAATCTATTTCAATTG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TAGTGATGAGCACACAAAATATCATACAGCTCTAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AATTATAAACCATCAGGAAAAATATGTAAACAAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTAATTTCACCTCACTTTTAATCATTATAACATA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GCAATCTCCTGCACCTGTTCTAATCTAGTGCAAG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTTTTAAGAGAAATTAACGATTTAACACAAACT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GCGGCTTTCTCTTGTAGGGCTTGGATGGCTAAGCT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TATAATGTATTTAGATAAGTTCGATAAGTTCATG
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GTAGTGGAAAATTGCAATTAATCCCAAATAAAATT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GCCTACAAGGCTATCCTCTTTATACACTCCAACA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	AAAGCAATAATTAAAGATAAAGAATGTATTTTTAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACTATCAACTAATAAACCACTTTCTGTTCCAATA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATTAGCTTTCATAGCTGAAGTCAACATATCTAAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTATACACCACTTAACAATATATTTACTACTATGAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TCCTTTAGAGCGTGACCAATAAGTAATTTTACAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ATATAATACACCTTGTAAATGGTCGTATTCATGCT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	GTAGACTGGATTACAGAAATTGCAGGGGAACAA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CTTTTCTAGTTCGATTTCTCTTTCAAGCTTTTCA
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	ACGTATCTCAATCTCTGTTACAACTTCCATTACAT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	TTCATCTAATGTTTCATTTAAACTGTTCCCACTTT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC	CATTAGCATATTGTCAATCTTTAACATATATGGATT
ATTTCAATCCACACTCCCCTTGCGAGGAGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
CP035281.1\|QAT44139.1\|2058651_2059395_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187782
CP035281.1\|QAT43418.1\|2042297_2043233_-\|glycyl-radical-enzyme-activating-protein	unknown	unknown	gnl\|CDD\|274163
CP035281.1\|QAT43428.1\|2062480_2062687_-\|hypothetical-protein	unknown	unknown	unknown
CP035281.1\|QAT43420.1\|2045817_2047077_-\|divalent-metal-cation-transporter	unknown	unknown	gnl\|CDD\|334596
CP035281.1\|QAT43425.1\|2056699_2058655_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl\|CDD\|378245
CP035281.1\|QAT43413.1\|2036373_2036766_-\|fluoride-efflux-transporter-CrcB	unknown	unknown	gnl\|CDD\|184579
CP035281.1\|QAT43414.1\|2036785_2037349_-\|DUF190-domain-containing-protein	unknown	unknown	gnl\|CDD\|376875
CP035281.1\|QAT44138.1\|2034378_2036025_+\|peptidase	unknown	unknown	gnl\|CDD\|173804
CP035281.1\|QAT43417.1\|2040726_2042238_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|223903
CP035281.1\|QAT43415.1\|2037675_2038563_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381364
CP035281.1\|QAT43427.1\|2062242_2062491_-\|phage-holin	unknown	unknown	gnl\|CDD\|377377
CP035281.1\|QAT43416.1\|2038801_2040655_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
CP035281.1\|QAT43429.1\|2062696_2063428_-\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|366703
CP035281.1\|QAT43426.1\|2059432_2061775_-\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP035281.1\|QAT43424.1\|2055885_2056719_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|187820
CP035281.1\|QAT43412.1\|2036006_2036381_-\|fluoride-efflux-transporter-CrcB	unknown	unknown	gnl\|CDD\|172693
CP035281.1\|QAT43421.1\|2053901_2054192_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP035281.1\|QAT43419.1\|2043245_2045615_-\|formate-C-acetyltransferase/glycerol-dehydratase-family-glycyl-radical-enzyme	unknown	unknown	gnl\|CDD\|153086
CP035281.1\|QAT43423.1\|2055229_2055889_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
CP035281.1\|QAT43422.1\|2054204_2055233_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360

Protein	Function_ID	Function_description	E-value
CP035281.1\|QAT44139.1\|2058651_2059395_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187782	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.15481e-92
CP035281.1\|QAT43418.1\|2042297_2043233_-\|glycyl-radical-enzyme-activating-protein	gnl\|CDD\|274163	TIGR02494, PFLE_PFLC, glycyl-radical enzyme activating protein. This subset of the radical-SAM family (pfam04055) includes a number of probable activating proteins acting on different enzymes all requiring an amino-acid-centered radical. The closest relatives to this family are the pyruvate-formate lyase activating enzyme (PflA, 1.97.1.4, TIGR02493) and the anaerobic ribonucleotide reductase activating enzyme (TIGR02491). Included within this subfamily are activators of hydroxyphenyl acetate decarboxylase (HdpA), benzylsuccinate synthase (BssD), gycerol dehydratase (DhaB2) as well as enzymes annotated in E. coli as activators of different isozymes of pyruvate-formate lyase (PFLC and PFLE) however, these appear to lack characterization and may activate enzymes with distinctive functions. Most of the sequence-level variability between these forms is concentrated within an N-terminal domain which follows a conserved group of three cysteines and contains a variable pattern of 0 to 8 additional cysteines.	1.67245e-91
CP035281.1\|QAT43420.1\|2045817_2047077_-\|divalent-metal-cation-transporter	gnl\|CDD\|334596	pfam01566, Nramp, Natural resistance-associated macrophage protein. The natural resistance-associated macrophage protein (NRAMP) family consists of Nramp1, Nramp2, and yeast proteins Smf1 and Smf2. The NRAMP family is a novel family of functional related proteins defined by a conserved hydrophobic core of ten transmembrane domains. This family of membrane proteins are divalent cation transporters. Nramp1 is an integral membrane protein expressed exclusively in cells of the immune system and is recruited to the membrane of a phagosome upon phagocytosis. By controlling divalent cation concentrations Nramp1 may regulate the interphagosomal replication of bacteria. Mutations in Nramp1 may genetically predispose an individual to susceptibility to diseases including leprosy and tuberculosis conversely this might however provide protection form rheumatoid arthritis. Nramp2 is a multiple divalent cation transporter for Fe2+, Mn2+ and Zn2+ amongst others it is expressed at high levels in the intestine; and is major transferrin-independent iron uptake system in mammals. The yeast proteins Smf1 and Smf2 may also transport divalent cations.	5.27218e-118
CP035281.1\|QAT43425.1\|2056699_2058655_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	2.63312e-100
CP035281.1\|QAT43413.1\|2036373_2036766_-\|fluoride-efflux-transporter-CrcB	gnl\|CDD\|184579	PRK14231, PRK14231, fluoride efflux transporter CrcB.	2.27174e-30
CP035281.1\|QAT43414.1\|2036785_2037349_-\|DUF190-domain-containing-protein	gnl\|CDD\|376875	pfam02641, DUF190, Uncharacterized ACR, COG1993.	2.3408e-23
CP035281.1\|QAT44138.1\|2034378_2036025_+\|peptidase	gnl\|CDD\|173804	cd07478, Peptidases_S8_CspA-like, Peptidase S8 family domain in CspA-like proteins. GSP (germination-specific protease) converts the spore peptidoglycan hydrolase (SleC) precursor to an active enzyme during germination of Clostridium perfringens S40 spores. Analysis of an enzyme fraction of GSP showed that it was composed of a gene cluster containing the processed forms of products of cspA, cspB, and cspC which are positioned in a tandem array just upstream of the 5' end of sleC. The amino acid sequences deduced from the nucleotide sequences of the csp genes showed significant similarity and showed a high degree of homology with those of the catalytic domain and the oxyanion binding region of subtilisin-like serine proteases. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	2.66915e-176
CP035281.1\|QAT43417.1\|2040726_2042238_-\|amino-acid-permease	gnl\|CDD\|223903	COG0833, LysP, Amino acid transporters [Amino acid transport and metabolism].	0
CP035281.1\|QAT43415.1\|2037675_2038563_-\|aldo/keto-reductase	gnl\|CDD\|381364	cd19138, AKR_YeaE, Escherichia coli YeaE and similar proteins. Escherichia coli YeaE is the prototype of this family. It acts as an aldo-keto reductase (AKR) that catalyzes the reversible reduction of ketones to the respective alcohols using NAD(P)H as a hydride donor.	2.30324e-141
CP035281.1\|QAT43427.1\|2062242_2062491_-\|phage-holin	gnl\|CDD\|377377	pfam04531, Phage_holin_1, Bacteriophage holin. This family of holins is found in several staphylococcal and streptococcal bacteriophages. Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis. It is thought that the temporal precision of holin-mediated lysis may occur through the buildup of a holin oligomer which causes the lysis.	2.0813e-22
CP035281.1\|QAT43416.1\|2038801_2040655_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	3.24098e-19
CP035281.1\|QAT43429.1\|2062696_2063428_-\|M23-family-metallopeptidase	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	1.30823e-32
CP035281.1\|QAT43426.1\|2059432_2061775_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	4.71066e-56
CP035281.1\|QAT43424.1\|2055885_2056719_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	1.48526e-103
CP035281.1\|QAT43412.1\|2036006_2036381_-\|fluoride-efflux-transporter-CrcB	gnl\|CDD\|172693	PRK14205, PRK14205, fluoride efflux transporter CrcB.	4.29869e-27
CP035281.1\|QAT43421.1\|2053901_2054192_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.88571e-31
CP035281.1\|QAT43419.1\|2043245_2045615_-\|formate-C-acetyltransferase/glycerol-dehydratase-family-glycyl-radical-enzyme	gnl\|CDD\|153086	cd01677, PFL2_DhaB_BssA, Pyruvate formate lyase 2 and related enzymes. This family includes pyruvate formate lyase 2 (PFL2), B12-independent glycerol dehydratase (DhaB) and the alpha subunit of benzylsuccinate synthase (BssA), all of which have a highly conserved ten-stranded alpha/beta barrel domain, which is similar to those of PFL1 (pyruvate formate lyase 1) and RNR (ribonucleotide reductase). Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. DhaB catalyzes the first step in the conversion of glycerol to 1,3-propanediol while BssA catalyzes the first step in the anaerobic mineralization of both toluene and m-xylene.	0
CP035281.1\|QAT43423.1\|2055229_2055889_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	3.09973e-29
CP035281.1\|QAT43422.1\|2054204_2055233_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	5.91267e-168

>CP035281.1|QAT43420.1|2045817_2047077_-|divalent-metal-cation-transporter
MNWFQKKFNRELHDPVKEAKDFIKYIGPGLLVTVGFIDPGNWASNLAAGSDYGYKLLWMVTLSTIMLILLQHNVAHLGIVTGDCLSEATAKHLKPALSKILLSTAVLASISTALAEILGGAIALELLFKIPIRLGSLIVAGFVTWMLFSSSYKRLEKWIIGFVSIIGVSFIYELSIVHVNWGEAAASFVTPSMPANSMPIIMAVLGAVVMPHNLFLHSEIIQSREWNKEDDAVIKKQLKYEFGDTLISMLIGWAINSAMIILAAAAFHAKNIQVSELGQAQQLLQPLLGQASAVIFGIALLMAGLASTTTAGMAGGSIIAGMFQEPYDIKDLHTKVGVGGIFAVATAAIFLISDPFKGLIYSQMLLSIQLPITVFLQIYLTSSAKVMGKYKNTWLDKILLGIIGIVVSILNIMLLISLV
>CP035281.1|QAT43419.1|2043245_2045615_-|formate-C-acetyltransferase/glycerol-dehydratase-family-glycyl-radical-enzyme
MLNERLQRMKNKYFDTTPSITAERLVLATEAHKKFAGDAIPIFRARIAQYVMENMTTLVLADELIVGTPTNEYRGANLFPEYTSSSWLIEDIDDFPVRKTDPYNIKPEDRETILETLKYWKGRALEDLAPEILPDYIENARQKDLISVGCRNGVSGETTPNHKKFLNLGLRGFIAECRENIDRVKGGTKEKQEQVDFWKACIIICEGMITYAHRMAEEAEKQAGACTDQKRKAELMQIAENCRVVPENPPQSFHQAVQMIWFIQVAFHIEAPTTACGFGRFDQYMYPFYQADLEAGKITEAEALELIECFYLKCCEVYEVRDRWYSKSFAGYPMWEILMVGGQTTDGKDATNDLSYLCLEAGSDLQTTQPVLAVRVHEGTPEKLFRKGAEMMQAGMANPGFFNDDAAIPMVLGKGCTMEEARDWNIVGCIQPAPGGGTTDSSPDAGYVNAPKVLELVLHNGRDPKTGEQLGLQTGEAKDFKDVKELTEAVKKQLIYFYQMIKDGYDLMVPYHMLRLPVIFASMAVDGCVELGKSVQEGGAKYSTAGMFITGAANLADSLVAIEEVVYKDKTISMDELITALDNNFQGNERLRQLLINKPPKFGNDNEYVDGVARDILGFVAETVQQWEDSRHGHYSFCNLSQTVNISHGEVCGATPDGRLAGQPYCDNSSPTMGRDICGPTATVKSVAAIDQKKFHDGALFNIRFDPKGISGEKGLQTIEGVIKTYFKHGGEHIQINVVDDETLRKAQEKPEDYKGLMVRVAGYMAYFTELDKAAQDTIIDRTAHLKIS
>CP035281.1|QAT43418.1|2042297_2043233_-|glycyl-radical-enzyme-activating-protein
MKKESLSVLVGGIQKFSTEDGPGIRTTVFLKGCPLNCVWCHNPELISFEQEVIESPNSCIQCGYCIPACPDKAIYLDEQGRIRINREACSKCLTCTEVCYSKGLQPVATHMTVEEVLYQVAQDKGFYDHTNGGLTISGGEMLSHPRFVEALVDQAAEKEINVCLDTSGFGDGNVLEKLSRKENVDFILYDMKFMDNEKHVTYTGQENTKILENLCRLTQIPEVVGKIVMRMPLIKGMNDSWEMMKKTSDFYKKNNIKSVTLLPYHDLGLSKMNRIGGVQQRYEPPSEEYVLEIKKLFEEEAAMEVEILGKI
>CP035281.1|QAT43417.1|2040726_2042238_-|amino-acid-permease
MGKDGIHERENLERGLKSRHLTMIAIGGTIGTGLFLAMGGTIHDAGPGGAVLAYAIMGVVVYFMMTALGEIATELPVPGAFTAYADRFIDPAWGFMNGWSYWFGCAMTVAAELIAGSIIIKYWFPGTNSSLWAMLFLAILMAINLFSVKGFGEAEYWFAGIKVVVTIIFLIVGVLMIAGIMGVGGHEVEFSNWVLDGGEAGKAPFPNGAGGVILVFLVAAFSFSNTEVIGLTAAESENPSKDVPKAIKSVFWRILIFYIGAILVIATLIPFTEPTLLDAAEDNIAASPFTIVFKNAGFAAAASLMNAVILTSVLSCGNASLYCASRTIQVMAKKGAAPSYFAKLNNKGVPVRAIVLTGLIASSAFIASLVGDGVAYTAAYYLCGVAGIVNWLTISLAHYRFRKGWIKQGHSLDELKYKAPCYPYGTLFSITICTFVLITCNYWVFSDFSWFNFITSYGLIPLGFIFFFGYKKKKHTKWVRYEDMDFTPPEGADRHSISAIEMD
>CP035281.1|QAT43416.1|2038801_2040655_+|AraC-family-transcriptional-regulator
MLLEKNFYPDDFPMNIRIGNLKEYPIHYHYDIEFVFVLKGEIKLKNGYYTYTLKEGDIFTNNGHEVHAIYEGLGENIVAVIQVSNLFFTQYVPDLCKSCYRTYTAKEYDPRYDKLKKMLLMILLDYLKKSRNYEQQCIHSMLEFIQYLNSNFNLFAFEDQVVVQVKNNNAVLMERMSRIINYIYENHSEKITLKDLAKLENLNEYYISHLIKEFTGMSFRELLCFARVEWSEIYLLNTDKTIASIAREVGFSTTAFYETHFIKWFKKTPEEHRKIYAPMASNIRSTQFDIIPINQAIHIIKQNLSSMNSQDKNTNQVQKLSLDISVDAAAEPLRTLEPEFEIALTPAGYDTLGIRLYDHLSNFNCKEVTIKTNSSSSDSPVFILKRELEQKGYKTAVKSTEVLNGFTSFGLDSAAHGIHILKENLFGQNKRISINLIDLGDKETILKGMPSILTSGGIPKPSYYAYWLLSILRGTLICRGKHYAVIRACGTHPDYFIVVFNYNEEIDRLCTRNATVHETQDVLHSFNDQLDIHFILNHLSGDYLISRYSIDHHNNLFDYMSKLNFPDSLNLSNHKTALLYTVPFLEIYTEKVTQDLNLHISLNGLGIQFIRIQQHLS
>CP035281.1|QAT43415.1|2037675_2038563_-|aldo/keto-reductase
MEILKQQRVKLPDGSYMPKLGQGTWLMGEDDSNYEREINGLRHGIDMGMTLIDTAEMYADGKAENIVGNAIRNVERKDVYLVSKVYPKNACKKHIYSSLERSLKLLETNYLDLYLLHWREDTDLSEMVYCMEDLKQKGRIKRWGVSNFDVEDMEDLWKVPDGNQCSTNQVLYNLGTRGIEYDLLHWQRERQIPFMAYSPVGQAGGLTTQDGISKAILMKDQNVCQVAKKHGISVVQLLLAFVLRLEDMVAIPKAVGVEHIEENAAASRIILTEEDLEQLSKSFPAPTEKIDMEKY
>CP035281.1|QAT43414.1|2036785_2037349_-|DUF190-domain-containing-protein
MNYLWEHEIPGVTMRRGNAGIDEQGSIQYDILEDAYFNNLPIIIETVIPKELADKVKGGLKSLMKHGQISITKGLEEDEIQEHEYFVIKVYTRENKKKLLKKDEYEKILTFLQEKNVLWATVTKGIAGYGRDHVIYSQHLFPLSENLPLVIECMVEREQLSGILEELKQIVTDGVIFTLPVQVILNR
>CP035281.1|QAT43413.1|2036373_2036766_-|fluoride-efflux-transporter-CrcB
MYYLYIAVFGAIGAAARYWISITFETGDFPYDILCINILGSFLLAITLRYLATVSRFSHSLITGIGIGLIGSFTTFSTFSAQVMDLLLREQYITAAAYILSNLIGGFLSAALGVYVSNRLITRKELKENA
>CP035281.1|QAT43412.1|2036006_2036381_-|fluoride-efflux-transporter-CrcB
MLESLIVMIGGSFGAVCRFAVSSFIKKAFSTEFPISTLFINVAGCFLMGGLLASHPGNLDQLLLGTGFLGGFTTFSTFEMENVTLFQQKEYGKLSVYVLCSCVISVFAVFLGAYAGHAFYSSRI
>CP035281.1|QAT44138.1|2034378_2036025_+|peptidase
MIRKSASYAPQILAHPGLIAAHSIGMYFICYAKTEDYLEMMEYVGSDYINTVPTILGLLDRASLEAAGIIQVQQQPYLNLNGSNVLIGFVDTGIDYTQPAFRYEDGRSKIRFIYDQSIPGNPPEGFPLGTEYTNENIQTALSSDTPYEVVPHMDTAGHGTFLASIAAGRPADNFTGAAPDSEIIMVKLKKSYPFYLDRFCVPEEQENAFSATAVMLGVEYILQKAEKLNRPVVICIGLGSNYDSHDGYGIFAEYLYNISNNPGVCLCIAVGNESQARHHFSQQFSSDGAPQNIDIMVGENAGDIFVLIGNTISDRISVSVRSPTGELVNRVTPISGYTFNSQLVLERSQVTVSYYYPLEGSGDQITIIRILDATPGIWTITAYGDIVLNGSLNAWLPLTGFVSPTVEFLSSTPYNTITSPANAPGGVHCGAYNSFRNSLYPNSSWGSTILPLDLPDFVAPGYQVGGFYPTGYGTMDGTSVAAAITAGACALMLQWGIVESNDLGFSTPLIRAYLIRGCQRTDVMDYPNPQWGFGTLNLLQTFFYMREL
>CP035281.1|QAT43421.1|2053901_2054192_-|CRISPR-associated-endonuclease-Cas2
MLVLVTYDVSTETMAGKKRLRHVAKKCLSYGQRVQNSVFECNIDWSQYLNLQNELKTIINTKEDSLRFYNLGNNYSEKVIHIGAKPSIDLEGDLII
>CP035281.1|QAT43422.1|2054204_2055233_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNVLFVTQTDAKVYLETENVCVRKEDELLIRVPLLNLEQIVLFNYYGATPQLLGECVKRKISVSFLSEYGKYYGTFHGESSGNVLLRREQYRIADDNRGLEYAKAFIFGKLHNQKWVIERGIRDYSLRIDTPLLKKQSSFISEQLKQVLSVDSGETLRAAEGNAAHYYFSAFDELILQNKEFFTFKTRNRRPPTDAVNAMLSFAYTLLASECRHALEVVGLDSYVGFLHADRPGRASLALDLMEELRPHVADRFVLSLINRSEVAESDFEVQSSGAVYLSAQSRKKFLSSWQNRKKEEIVHPFLKEKIEWGLVPYCQALLLARTIRGDLDGYPPFLWK
>CP035281.1|QAT43423.1|2055229_2055889_-|CRISPR-associated-protein-Cas4
MIYEEEDYLLLSGIQHYAFCPRQWALIHIEDQWNENYLTTGGRLLHSKAHNGESVEKRGNLIIFRGLKVRSSELGISGECDIVEFHKSHDGVSLHGYSDLWSPYPVEYKRGKSKLDDCDRLQLCAQAVCLEEMLCVKIENGALFYGEPRRREVVAFTLELRTTLKDTVTTMHQLFMQKYTPKAVKGKYCKSCSIKELCLPNLGKADKTSVKRYMEAHLE
>CP035281.1|QAT43424.1|2055885_2056719_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MATLQNKIDFALIFTVKNANPNGDPLGGNRPRTTSDGLGEVSDVCLKRKIRNRLQELGSDIFVQMDENNRDGKKSLSERFNDFLSTLSKDEQKVKDTVAAKACEKWMDVRSFGQVFAFKKGSTTAEVSMGIRGPVTIQSAFSKEPIVIESIQITKSVNGDPTSDGKKSSDTMGMKHRVSKAVYVTYGSISPQLAEKTGFSDGDADAIKNVLVSLFEGDESSARPSGSMQVLNVVWVAHNSKSGQYSSAKVHNSINVGEDGSVTIEELDGLSYEVLES
>CP035281.1|QAT43425.1|2056699_2058655_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MVGLFQNLLETYEKCSEAVGIVQVDADGNANEKKTLLPIGHMTFKSQICVTIDEDGVFVRASRDNKETTIIAPCTEISAGRSSGIAAHSLCDQLDYVGDINEGKIAAYLSQLNSWKGNIPELNAIYTYVSGKTMMDDLLNSRIFKESEYQTKTDEHGESQLDKEKIRKLGVRFIVQMTDNMVKVWESTELRNAWIDNMSSNSTFNEEAFDYLSGEVVHQVAAQHPKNINSLTGNAKLLSCNDTSGFTFRGRFAKQNDAVIVDYIQSQKMHQMLRWLIANYGYAADSQVIVTWGVDRDTEVKAKVQDNSLDFFENMEEVKTKADILSGTKGGIYADYADKLKNLLQGFGNAKDIKQHFCKICIAVFDAATTGRMGLVFYQELPKNTYLENIVNWHSDTSYFLTAWKKERDEHGKDKNTPIHYIGAPSFDDIVFAVYGKSHGDKSYEILKKNTRKQLLECMFGNFAFPKNMVEMAANRASNPMGFMDLNGKFSENDWKRALSITCALTRKFYKQQKEEIPLELDTDRTNRDYLFGRLLSVADKLESAALYKADKQNTRPTNATKLMSAFRVKPHSTWGILYDQLIPYRNQLNGAGYYQSLIDNILVLFEEGDYEDNSPLSPLYLLGYAAQNRAFLKNNNNEKTEGTDNGYITE
>CP035281.1|QAT44139.1|2058651_2059395_-|type-I-C-CRISPR-associated-protein-Cas5
MIKKRNSVEFEVYGKYALFSDPITRVGGEKFSYQVPTYQALKGILESVYWKPTFIWVIDAVRVMNKIQTEGKGIRPIKMNGGNDLSYYTYLKEARYQVLAHFEWNENRPGLQNDRNENKHHNIAKRSIGKGGRRDIFLGTRECQGYVEHCEFGRGSGFYDDYGELNFGFMFHGIDYPDENPTKNEEGIPLRNFDVRFYNCTMKDGIILFPAPSDSSLKRRTVFENQQMKEFVIGQNLLPVETEGGDE
>CP035281.1|QAT43426.1|2059432_2061775_-|CRISPR-associated-helicase-Cas3'
MYETSIARKSSEGKVQSLWEHSTNVAEISNDMSHFPNTSKLLAYLHDLGKVSAEFQEYINKGGEPGSVIHAWQGAFLSNEWLPTDCASEILIKEIIGFCVTAHHNHLADGVAPDGTTNYFDKFLKDSDPKYFLDEIKGKISESEKAELQRLFEHAKPEVNGLLAQIKEVYKNKSSANFALGLFVKYLFSCLVDADRLDAYLFDINETYSNQPFDWEPLILIFENELSEFPIDSNISIIRGAVSDKCKAAADKETGIYQLSVPTGGGKTLSSFRFALHHSRQYNKKRIIYVIPYLSIIEQTGNTLQDILNLPDDNNVIFEHHSNIVEPEDDKASEIRKLSAARWSSPVILTTMVQFLESVMSAKSGKLRKFASMADSVIIFDEIQSMPIKAIHCFNEVVTFLSKILNATIILCSATQPTLESTQRTNLLLHEEAKLIDCTEEFKGMKRVTVSAESEKDCETASDFILEKANVNGNCLIIVNTRKSALEIYNRLKSKTASFKILHLSTSMCPNHRVQIIHEMKTYLKENEKVICVSTQLIEAGVDISFACVVRAMSGLDSIAQAAGRCNRNGESAVPKIVYTFPLKDENLDRLMDIKSGKEITEQIIHGKNDELDLLDERVMATFYQRYFSGKDDQMDYPTAEGEWIYEMLSGNGYGKRNYKNRTGTLFSHCIPQAFHSAGENFSVIDKNTKSAIVIFGESESLIEDFRKQPTGILTKQKAHIMKKLQKYSVSLYEWEWKKLSEQGALDILDEETAILLLSGSYYSEETGVVLEIIQDDLII
>CP035281.1|QAT43427.1|2062242_2062491_-|phage-holin
MKINWKLRLKNKTTLAALVACVVAFVYQVLGILGITAPISQDQVAQGISIVINLLVAVGVLVDPTTSGTGDSTRALTYKKPN
>CP035281.1|QAT43428.1|2062480_2062687_-|hypothetical-protein
MTTEFWIQMIVYAVSLGSFGGMVITKLNNLEKKQDKHNGLMERMVVVEQSVKSAHHRIDEIKEEYHEN
>CP035281.1|QAT43429.1|2062696_2063428_-|M23-family-metallopeptidase
MAGRKINHTGAEMPPFSFAERRDKMINLKCLPVDNLNLDAVKGTAAYGPRVNPITKKQQIHHGVDLNKLTTGQAVNNKPVKATAGGIVIVSKMQGNGKGYGNYIVIDHGNFYTLHAHLSSRKITAGQSVKAGTVIGAVGSTGNSTGPHLHFGICTSYSMADPDGKSSWLDPLPYLKDLLKVEEEEEEMKRYNKVEELPKSLQQEVRALVNAGALKGDENGNLDITEDMARCMIINKRYADSKK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP035281_3	3.22\|2049713\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2049713-2049745	33	NZ_CP031069	Bacillus sp. JAS24-2 plasmid pl626, complete sequence	499827-499859	5	0.848
CP035281_3	3.54\|2051854\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2051854-2051886	33	NC_011246	Borrelia recurrentis A1 plasmid pl124, complete sequence	96974-97006	6	0.818
CP035281_3	3.54\|2051854\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2051854-2051886	33	NC_011247	Borrelia duttonii Ly plasmid pl165, complete sequence	136632-136664	6	0.818
CP035281_3	3.72\|2053060\|34\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2053060-2053093	34	NZ_CP031089	Spiroplasma phoeniceum P40 plasmid pSPh535, complete sequence	30879-30912	6	0.824
CP035281_3	3.72\|2053060\|34\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2053060-2053093	34	NZ_CP031089	Spiroplasma phoeniceum P40 plasmid pSPh535, complete sequence	31113-31146	6	0.824
CP035281_3	3.20\|2049581\|33\|CP035281\|CRISPRCasFinder,CRT	2049581-2049613	33	NZ_CP021873	Borrelia miyamotoi strain CA17-2241 plasmid lp72, complete sequence	29708-29740	7	0.788
CP035281_3	3.22\|2049713\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2049713-2049745	33	MN032614	Aeromonas phage PS1, complete genome	141324-141356	7	0.788
CP035281_3	3.22\|2049713\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2049713-2049745	33	MN453779	Aeromonas phage PS2, complete genome	140801-140833	7	0.788
CP035281_3	3.53\|2051787\|34\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2051787-2051820	34	LR597655	Escherichia phage T5_ev219 genome assembly, chromosome: 1	32868-32901	8	0.765
CP035281_3	3.53\|2051787\|34\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2051787-2051820	34	MT653146	Salmonella phage 8sent1748, complete genome	32890-32923	8	0.765
CP035281_3	3.53\|2051787\|34\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2051787-2051820	34	NC_047835	Escherichia phage OSYSP, complete genome	5664-5697	8	0.765
CP035281_3	3.53\|2051787\|34\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2051787-2051820	34	NC_048203	Escherichia virus vB_Eco_mar003J3 genome assembly, chromosome: 1	113422-113455	8	0.765
CP035281_3	3.53\|2051787\|34\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2051787-2051820	34	MT653143	Salmonella phage 3sent1, complete genome	30603-30636	8	0.765
CP035281_3	3.53\|2051787\|34\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2051787-2051820	34	MT311645	Salmonella phage vB_Sen-E22, complete genome	13830-13863	8	0.765
CP035281_3	3.53\|2051787\|34\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2051787-2051820	34	MK972716	Salmonella phage SE8, complete genome	5096-5129	8	0.765
CP035281_3	3.53\|2051787\|34\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2051787-2051820	34	NC_048857	Phage NBSal005, complete genome	88390-88423	8	0.765
CP035281_3	3.53\|2051787\|34\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2051787-2051820	34	MH102285	Salmonella phage vB_SenS_PHB06, partial genome	70599-70632	8	0.765
CP035281_3	3.53\|2051787\|34\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2051787-2051820	34	MK972715	Salmonella phage SE11, complete genome	36972-37005	8	0.765
CP035281_3	3.54\|2051854\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2051854-2051886	33	NC_022111	Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence	584513-584545	8	0.758
CP035281_3	3.57\|2052053\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052053-2052085	33	MK448894	Streptococcus phage Javan272, complete genome	22267-22299	8	0.758
CP035281_3	3.57\|2052053\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052053-2052085	33	MK448725	Streptococcus phage Javan275, complete genome	21593-21625	8	0.758
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	CP037991	Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence	472858-472890	8	0.758
CP035281_3	3.71\|2052992\|35\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052992-2053026	35	MN694632	Marine virus AFVG_250M389, complete genome	43217-43251	8	0.771
CP035281_3	3.19\|2049515\|33\|CP035281\|CRISPRCasFinder,CRT	2049515-2049547	33	NZ_CP012424	Spiroplasma kunkelii CR2-3x plasmid pSKU205, complete sequence	13774-13806	9	0.727
CP035281_3	3.19\|2049515\|33\|CP035281\|CRISPRCasFinder,CRT	2049515-2049547	33	NZ_CP012424	Spiroplasma kunkelii CR2-3x plasmid pSKU205, complete sequence	18761-18793	9	0.727
CP035281_3	3.20\|2049581\|33\|CP035281\|CRISPRCasFinder,CRT	2049581-2049613	33	NZ_AP023151	Klebsiella pneumoniae strain SMKP03 plasmid pSMKP03S, complete sequence	24174-24206	9	0.727
CP035281_3	3.20\|2049581\|33\|CP035281\|CRISPRCasFinder,CRT	2049581-2049613	33	CP052339	Klebsiella pneumoniae strain D17KP0018 plasmid unnamed	5443-5475	9	0.727
CP035281_3	3.20\|2049581\|33\|CP035281\|CRISPRCasFinder,CRT	2049581-2049613	33	NZ_CP032224	Klebsiella pneumoniae strain AR_0046 plasmid unnamed2, complete sequence	13504-13536	9	0.727
CP035281_3	3.20\|2049581\|33\|CP035281\|CRISPRCasFinder,CRT	2049581-2049613	33	NZ_CP027046	Klebsiella pneumoniae strain 1_GR_13 plasmid unnamed, complete sequence	49402-49434	9	0.727
CP035281_3	3.43\|2051118\|32\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2051118-2051149	32	NZ_CP013709	Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence	189371-189402	9	0.719
CP035281_3	3.45\|2051249\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2051249-2051281	33	CP015514	Vibrio vulnificus strain FORC_036 plasmid unnamed, complete sequence	854228-854260	9	0.727
CP035281_3	3.54\|2051854\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2051854-2051886	33	NZ_LR214953	Mycoplasma neurolyticum strain NCTC10166 plasmid 3	4928-4960	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP023002	Bacillus anthracis strain 14RA5914 plasmid pX01, complete sequence	101738-101770	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_AP019732	Bacillus anthracis strain PCr plasmid PCr-pXO1	96117-96149	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP029324	Bacillus anthracis strain 17OD930 plasmid pXO1, complete sequence	119528-119560	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP007665	Bacillus anthracis str. Vollum plasmid unnamed, complete sequence	97657-97689	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP009340	Bacillus anthracis strain Ohio ACB plasmid 1, complete sequence	154427-154459	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP009696	Bacillus anthracis strain RA3 plasmid pXO1, complete sequence	92612-92644	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP009463	Bacillus anthracis strain SK-102 plasmid pXO1, complete sequence	138725-138757	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP009699	Bacillus anthracis strain BA1035 plasmid pXO1, complete sequence	101513-101545	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP009540	Bacillus anthracis str. Sterne plasmid pXO1, complete sequence	71167-71199	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP009324	Bacillus anthracis strain PAK-1 plasmid 1, complete sequence	95798-95830	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP009980	Bacillus anthracis strain Ames isolate BACI008 plasmid unnamed1, complete sequence	3481-3513	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP047132	Bacillus anthracis str. BF1 plasmid pXO1, complete sequence	118648-118680	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_KT186230	Bacillus anthracis strain P.NO2 plasmid pXO1, complete sequence	104277-104309	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP036355	Bacillus sp. SYJ plasmid unnamed1, complete sequence	123569-123601	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NC_014331	Bacillus cereus biovar anthracis str. CI plasmid pCI-XO1, complete sequence	104497-104529	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP022045	Bacillus anthracis strain FDAARGOS_341 plasmid unnamed1, complete sequence	41163-41195	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NC_007322	Bacillus anthracis str. 'Ames Ancestor' plasmid pXO1, complete sequence	104254-104286	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NC_012579	Bacillus anthracis str. CDC 684 plasmid pX01, complete sequence	104574-104606	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP015777	Bacillus anthracis strain Tangail-1 plasmid pXO1, complete sequence	104254-104286	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP018904	Bacillus anthracis strain Tyrol 4675 plasmid pXO1, complete sequence	104629-104661	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_AP018444	Bacillus anthracis strain CZC5 plasmid pXO1, complete sequence	104339-104371	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NC_012656	Bacillus anthracis str. A0248 plasmid pXO1, complete sequence	104518-104550	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NC_010934	Bacillus cereus strain G9241 plasmid pBCXO1, complete sequence	162349-162381	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP019589	Bacillus anthracis strain SPV842_15 plasmid pX01, complete sequence	104254-104286	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP010853	Bacillus anthracis strain A1144 plasmid pXO1, complete sequence	104235-104267	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP008847	Bacillus anthracis strain HYU01 plasmid pX01, complete sequence	104596-104628	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP006743	Bacillus anthracis str. SVA11 plasmid pXO1, complete sequence	104507-104539	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_AP014834	Bacillus anthracis strain Shikan-NIID plasmid pXO1	104338-104370	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP029806	Bacillus anthracis strain London_499 plasmid pX01, complete sequence	103241-103273	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NC_001496	Bacillus anthracis virulence plasmid PX01, complete sequence	104203-104235	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NC_017726	Bacillus anthracis str. H9401 plasmid BAP1, complete sequence	104307-104339	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP014177	Bacillus anthracis strain Stendal plasmid pXO1, complete sequence	104254-104286	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP009597	Bacillus anthracis str. V770-NP-1R plasmid pXO1, complete sequence	77936-77968	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP009901	Bacillus anthracis strain 2002013094 plasmid pXO1, complete sequence	75436-75468	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP009592	Bacillus cereus G9241 plasmid pBCX01, complete sequence	43719-43751	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP009543	Bacillus anthracis strain BA1015 plasmid pXO1, complete sequence	9148-9180	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP010321	Bacillus anthracis strain Canadian Bison isolate A0369 plasmid 1, complete sequence	172442-172474	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP009330	Bacillus anthracis strain K3 plasmid 1, complete sequence	142093-142125	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP009327	Bacillus anthracis strain Vollum 1B plasmid 1, complete sequence	148068-148100	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP001975	Bacillus anthracis str. A16R plasmid pXO1, complete sequence	104308-104340	9	0.727
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP001971	Bacillus anthracis str. A16 plasmid pXO1, complete sequence	104339-104371	9	0.727
CP035281_3	3.63\|2052455\|34\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052455-2052488	34	MN693524	Marine virus AFVG_25M219, complete genome	25972-26005	9	0.735
CP035281_3	3.19\|2049515\|33\|CP035281\|CRISPRCasFinder,CRT	2049515-2049547	33	MN694423	Marine virus AFVG_250M1001, complete genome	29166-29198	10	0.697
CP035281_3	3.22\|2049713\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2049713-2049745	33	CP024913	Cyanobacterium sp. HL-69 plasmid pCHL69-1, complete sequence	46256-46288	10	0.697
CP035281_3	3.41\|2050983\|34\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2050983-2051016	34	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	146956-146989	10	0.706
CP035281_3	3.44\|2051183\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2051183-2051215	33	AC171169	Escherichia virus H8 clone h8_phage, WORKING DRAFT SEQUENCE	24324-24356	10	0.697
CP035281_3	3.44\|2051183\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2051183-2051215	33	NC_031022	Shigella phage SHSML-45, complete genome	60788-60820	10	0.697
CP035281_3	3.44\|2051183\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2051183-2051215	33	NC_028754	Salmonella phage Shivani, complete genome	35393-35425	10	0.697
CP035281_3	3.44\|2051183\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2051183-2051215	33	NC_042307	Escherichia virus H8, complete genome, * SEQUENCING IN PROGRESS *	24324-24356	10	0.697
CP035281_3	3.54\|2051854\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2051854-2051886	33	CP033563	Acinetobacter nosocomialis strain 2010S01-197 plasmid p2010S01-197-2, complete sequence	87019-87051	10	0.697
CP035281_3	3.56\|2051986\|34\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2051986-2052019	34	NZ_CP015592	Bacillus cereus strain AR156 plasmid pAR460, complete sequence	356024-356057	10	0.706
CP035281_3	3.57\|2052053\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052053-2052085	33	MK250021	Prevotella phage Lak-B2, complete genome	438794-438826	10	0.697
CP035281_3	3.57\|2052053\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052053-2052085	33	MK250023	Prevotella phage Lak-B4, complete genome	438004-438036	10	0.697
CP035281_3	3.60\|2052253\|33\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052253-2052285	33	NZ_CP009691	Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence	233326-233358	10	0.697
CP035281_3	3.71\|2052992\|35\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052992-2053026	35	NZ_CP024445	Moraxella osloensis strain NP7 plasmid pNP7-2, complete sequence	67682-67716	10	0.714
CP035281_3	3.71\|2052992\|35\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052992-2053026	35	NZ_CP016589	Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence	114332-114366	10	0.714
CP035281_3	3.71\|2052992\|35\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2052992-2053026	35	MW012634	Bacillus phage DLc1, complete genome	5514-5548	10	0.714
CP035281_3	3.17\|2049382\|34\|CP035281\|CRISPRCasFinder,CRT	2049382-2049415	34	NZ_CP024283	Escherichia albertii strain 2014C-4356 plasmid unnamed1, complete sequence	12086-12119	11	0.676
CP035281_3	3.32\|2050380\|35\|CP035281\|CRISPRCasFinder,CRT,PILER-CR	2050380-2050414	35	KP790010	Gordonia phage GordDuk1, complete genome	12762-12796	11	0.686

1. spacer 3.22|2049713|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031069 (Bacillus sp. JAS24-2 plasmid pl626, complete sequence) position: , mismatch: 5, identity: 0.848

cttttaatattttgtaatgttgaatttgaacag	CRISPR spacer
atgttaaaattttgtaatgttgaattttaacaa	Protospacer
 * **** ******************* ****.

2. spacer 3.54|2051854|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NC_011246 (Borrelia recurrentis A1 plasmid pl124, complete sequence) position: , mismatch: 6, identity: 0.818

ctgta-ttgttttgaattatttttgtataaacaa	CRISPR spacer
-tgtatttgttttgaaatatttttttataaattt	Protospacer
 **** ********** ******* ******.

3. spacer 3.54|2051854|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NC_011247 (Borrelia duttonii Ly plasmid pl165, complete sequence) position: , mismatch: 6, identity: 0.818

ctgta-ttgttttgaattatttttgtataaacaa	CRISPR spacer
-tgtatttgttttgaaatatttttttataaattt	Protospacer
 **** ********** ******* ******.

4. spacer 3.72|2053060|34|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031089 (Spiroplasma phoeniceum P40 plasmid pSPh535, complete sequence) position: , mismatch: 6, identity: 0.824

actatca--actaataaaccactttctgttccaata	CRISPR spacer
--tttcaacacaaataaaccactatctgttccaaaa	Protospacer
  * ***  ** *********** ********** *

5. spacer 3.72|2053060|34|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031089 (Spiroplasma phoeniceum P40 plasmid pSPh535, complete sequence) position: , mismatch: 6, identity: 0.824

actatca--actaataaaccactttctgttccaata	CRISPR spacer
--tttcaacacaaataaaccactatctgttccaaaa	Protospacer
  * ***  ** *********** ********** *

6. spacer 3.20|2049581|33|CP035281|CRISPRCasFinder,CRT matches to NZ_CP021873 (Borrelia miyamotoi strain CA17-2241 plasmid lp72, complete sequence) position: , mismatch: 7, identity: 0.788

ataatacca----taaataaaaactattgttataata	CRISPR spacer
----tcccaaaactaaataataactattattataata	Protospacer
    * ***    ******* *******.********

7. spacer 3.22|2049713|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to MN032614 (Aeromonas phage PS1, complete genome) position: , mismatch: 7, identity: 0.788

cttttaatattttgtaatgttgaatttgaacag	CRISPR spacer
cacggaatgttttctaatgttgaatttgaacaa	Protospacer
* .  ***.**** ******************.

8. spacer 3.22|2049713|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to MN453779 (Aeromonas phage PS2, complete genome) position: , mismatch: 7, identity: 0.788

cttttaatattttgtaatgttgaatttgaacag	CRISPR spacer
cacggaatgttttctaatgttgaatttgaacaa	Protospacer
* .  ***.**** ******************.

9. spacer 3.53|2051787|34|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to LR597655 (Escherichia phage T5_ev219 genome assembly, chromosome: 1) position: , mismatch: 8, identity: 0.765

catcttcatttgcaattcttcttaattctcttat	CRISPR spacer
aaaattcatttgctattctgcttaattctctgta	Protospacer
 *  ********* ***** ***********

10. spacer 3.53|2051787|34|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to MT653146 (Salmonella phage 8sent1748, complete genome) position: , mismatch: 8, identity: 0.765

catcttcatttgcaattcttcttaattctcttat	CRISPR spacer
aaaattcatttgctattctgcttaattctctgta	Protospacer
 *  ********* ***** ***********

11. spacer 3.53|2051787|34|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NC_047835 (Escherichia phage OSYSP, complete genome) position: , mismatch: 8, identity: 0.765

catcttcatttgcaattcttcttaattctcttat	CRISPR spacer
aaaattcatttgctattctgcttaattctctgta	Protospacer
 *  ********* ***** ***********

12. spacer 3.53|2051787|34|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NC_048203 (Escherichia virus vB_Eco_mar003J3 genome assembly, chromosome: 1) position: , mismatch: 8, identity: 0.765

catcttcatttgcaattcttcttaattctcttat	CRISPR spacer
aaaattcatttgctattctgcttaattctctgta	Protospacer
 *  ********* ***** ***********

13. spacer 3.53|2051787|34|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to MT653143 (Salmonella phage 3sent1, complete genome) position: , mismatch: 8, identity: 0.765

catcttcatttgcaattcttcttaattctcttat	CRISPR spacer
aaaattcatttgctattctgcttaattctctgta	Protospacer
 *  ********* ***** ***********

14. spacer 3.53|2051787|34|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to MT311645 (Salmonella phage vB_Sen-E22, complete genome) position: , mismatch: 8, identity: 0.765

catcttcatttgcaattcttcttaattctcttat	CRISPR spacer
aaaattcatttgctattctgcttaattctctgta	Protospacer
 *  ********* ***** ***********

15. spacer 3.53|2051787|34|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to MK972716 (Salmonella phage SE8, complete genome) position: , mismatch: 8, identity: 0.765

catcttcatttgcaattcttcttaattctcttat	CRISPR spacer
aaaattcatttgctattctgcttaattctctgta	Protospacer
 *  ********* ***** ***********

16. spacer 3.53|2051787|34|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NC_048857 (Phage NBSal005, complete genome) position: , mismatch: 8, identity: 0.765

catcttcatttgcaattcttcttaattctcttat	CRISPR spacer
aaaattcatttgctattctgcttaattctctgta	Protospacer
 *  ********* ***** ***********

17. spacer 3.53|2051787|34|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to MH102285 (Salmonella phage vB_SenS_PHB06, partial genome) position: , mismatch: 8, identity: 0.765

catcttcatttgcaattcttcttaattctcttat	CRISPR spacer
aaaattcatttgctattctgcttaattctctgta	Protospacer
 *  ********* ***** ***********

18. spacer 3.53|2051787|34|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to MK972715 (Salmonella phage SE11, complete genome) position: , mismatch: 8, identity: 0.765

catcttcatttgcaattcttcttaattctcttat	CRISPR spacer
aaaattcatttgctattctgcttaattctctgta	Protospacer
 *  ********* ***** ***********

19. spacer 3.54|2051854|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NC_022111 (Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence) position: , mismatch: 8, identity: 0.758

ctgtattgttttgaattatttttgtataaacaa	CRISPR spacer
ctgtattgttttaaattattattgtgttatttt	Protospacer
************.******* ****.* * .

20. spacer 3.57|2052053|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to MK448894 (Streptococcus phage Javan272, complete genome) position: , mismatch: 8, identity: 0.758

acctaacctccattctaaataataaaagggagg	CRISPR spacer
atttttcctcctttctaaataataaaaaggcga	Protospacer
*..*  ***** ***************.** *.

21. spacer 3.57|2052053|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to MK448725 (Streptococcus phage Javan275, complete genome) position: , mismatch: 8, identity: 0.758

acctaacctccattctaaataataaaagggagg	CRISPR spacer
atttttcctcctttctaaataataaaaaggcga	Protospacer
*..*  ***** ***************.** *.

22. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

accatatattttgtataaattgtatttgtggca	CRISPR spacer
aaataatcttttgtattaattgtatttgtgcct	Protospacer
*    ** ******** ************* *

23. spacer 3.71|2052992|35|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to MN694632 (Marine virus AFVG_250M389, complete genome) position: , mismatch: 8, identity: 0.771

aaagcaataattaaagataaagaatgtatttttaa-----	CRISPR spacer
aaaggtataattaaagataaagaatgga-----aagaatt	Protospacer
****  ******************** *     **

24. spacer 3.19|2049515|33|CP035281|CRISPRCasFinder,CRT matches to NZ_CP012424 (Spiroplasma kunkelii CR2-3x plasmid pSKU205, complete sequence) position: , mismatch: 9, identity: 0.727

tgtaaacaaaatataattttaatcaaagtaaat	CRISPR spacer
ctaacaaaaaatacaattttaataaaagtaagc	Protospacer
.  * * ******.********* *******..

25. spacer 3.19|2049515|33|CP035281|CRISPRCasFinder,CRT matches to NZ_CP012424 (Spiroplasma kunkelii CR2-3x plasmid pSKU205, complete sequence) position: , mismatch: 9, identity: 0.727

tgtaaacaaaatataattttaatcaaagtaaat	CRISPR spacer
ctaacaaaaaatacaattttaataaaagtaagc	Protospacer
.  * * ******.********* *******..

26. spacer 3.20|2049581|33|CP035281|CRISPRCasFinder,CRT matches to NZ_AP023151 (Klebsiella pneumoniae strain SMKP03 plasmid pSMKP03S, complete sequence) position: , mismatch: 9, identity: 0.727

ataataccataaataaaaactattgttataata	CRISPR spacer
ttgctgtaataaataaaaaatattgttattatt	Protospacer
 *. *.. *********** ********* **

27. spacer 3.20|2049581|33|CP035281|CRISPRCasFinder,CRT matches to CP052339 (Klebsiella pneumoniae strain D17KP0018 plasmid unnamed) position: , mismatch: 9, identity: 0.727

ataataccataaataaaaactattgttataata	CRISPR spacer
ttgctgtaataaataaaaaatattgttattatt	Protospacer
 *. *.. *********** ********* **

28. spacer 3.20|2049581|33|CP035281|CRISPRCasFinder,CRT matches to NZ_CP032224 (Klebsiella pneumoniae strain AR_0046 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

ataataccataaataaaaactattgttataata	CRISPR spacer
ttgctgtaataaataaaaaatattgttattatt	Protospacer
 *. *.. *********** ********* **

29. spacer 3.20|2049581|33|CP035281|CRISPRCasFinder,CRT matches to NZ_CP027046 (Klebsiella pneumoniae strain 1_GR_13 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

ataataccataaataaaaactattgttataata	CRISPR spacer
ttgctgtaataaataaaaaatattgttattatt	Protospacer
 *. *.. *********** ********* **

30. spacer 3.43|2051118|32|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013709 (Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence) position: , mismatch: 9, identity: 0.719

tatatagaaagaggtgtccaaaatgactgtga	CRISPR spacer
acaatagaaagaggtgtataaaatgaaaataa	Protospacer
   ************** .*******  .*.*

31. spacer 3.45|2051249|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to CP015514 (Vibrio vulnificus strain FORC_036 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

tgtatcatcttgttggcttttcataacaaaggt	CRISPR spacer
tattgactcttgttggtttttcataaccaagaa	Protospacer
*.*    *********.********** ***.

32. spacer 3.54|2051854|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214953 (Mycoplasma neurolyticum strain NCTC10166 plasmid 3) position: , mismatch: 9, identity: 0.727

ctgtattgttttgaattatttttgtataaacaa	CRISPR spacer
tagtattgttttcaattatttttttatcatttt	Protospacer
. ********** ********** *** * .

33. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023002 (Bacillus anthracis strain 14RA5914 plasmid pX01, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

34. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019732 (Bacillus anthracis strain PCr plasmid PCr-pXO1) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

35. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029324 (Bacillus anthracis strain 17OD930 plasmid pXO1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

36. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007665 (Bacillus anthracis str. Vollum plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

37. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009340 (Bacillus anthracis strain Ohio ACB plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

38. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009696 (Bacillus anthracis strain RA3 plasmid pXO1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

39. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009463 (Bacillus anthracis strain SK-102 plasmid pXO1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

40. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009699 (Bacillus anthracis strain BA1035 plasmid pXO1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

41. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009540 (Bacillus anthracis str. Sterne plasmid pXO1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

42. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009324 (Bacillus anthracis strain PAK-1 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

43. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009980 (Bacillus anthracis strain Ames isolate BACI008 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

44. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047132 (Bacillus anthracis str. BF1 plasmid pXO1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

45. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KT186230 (Bacillus anthracis strain P.NO2 plasmid pXO1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

46. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP036355 (Bacillus sp. SYJ plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

47. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NC_014331 (Bacillus cereus biovar anthracis str. CI plasmid pCI-XO1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

48. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022045 (Bacillus anthracis strain FDAARGOS_341 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

49. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NC_007322 (Bacillus anthracis str. 'Ames Ancestor' plasmid pXO1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

50. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NC_012579 (Bacillus anthracis str. CDC 684 plasmid pX01, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

51. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015777 (Bacillus anthracis strain Tangail-1 plasmid pXO1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

52. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018904 (Bacillus anthracis strain Tyrol 4675 plasmid pXO1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

53. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018444 (Bacillus anthracis strain CZC5 plasmid pXO1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

54. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NC_012656 (Bacillus anthracis str. A0248 plasmid pXO1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

55. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NC_010934 (Bacillus cereus strain G9241 plasmid pBCXO1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

56. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019589 (Bacillus anthracis strain SPV842_15 plasmid pX01, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

57. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010853 (Bacillus anthracis strain A1144 plasmid pXO1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

58. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP008847 (Bacillus anthracis strain HYU01 plasmid pX01, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

59. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006743 (Bacillus anthracis str. SVA11 plasmid pXO1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

60. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014834 (Bacillus anthracis strain Shikan-NIID plasmid pXO1) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

61. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029806 (Bacillus anthracis strain London_499 plasmid pX01, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

62. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NC_001496 (Bacillus anthracis virulence plasmid PX01, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

63. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NC_017726 (Bacillus anthracis str. H9401 plasmid BAP1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

64. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014177 (Bacillus anthracis strain Stendal plasmid pXO1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

65. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009597 (Bacillus anthracis str. V770-NP-1R plasmid pXO1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

66. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009901 (Bacillus anthracis strain 2002013094 plasmid pXO1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

67. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009592 (Bacillus cereus G9241 plasmid pBCX01, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

68. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009543 (Bacillus anthracis strain BA1015 plasmid pXO1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

69. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010321 (Bacillus anthracis strain Canadian Bison isolate A0369 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

70. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009330 (Bacillus anthracis strain K3 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

71. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009327 (Bacillus anthracis strain Vollum 1B plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

72. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP001975 (Bacillus anthracis str. A16R plasmid pXO1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

73. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP001971 (Bacillus anthracis str. A16 plasmid pXO1, complete sequence) position: , mismatch: 9, identity: 0.727

accatatattttgtataaattgtatttgtggca	CRISPR spacer
gtaatagattttgtataaattttattttttata	Protospacer
.. *** ************** ***** * ..*

74. spacer 3.63|2052455|34|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to MN693524 (Marine virus AFVG_25M219, complete genome) position: , mismatch: 9, identity: 0.735

aattataaaccatcaggaaaaatatgtaaacaat	CRISPR spacer
tgatataaacgatcaagaaaaatatgtaagaggt	Protospacer
 . ******* ****.*************. ..*

75. spacer 3.19|2049515|33|CP035281|CRISPRCasFinder,CRT matches to MN694423 (Marine virus AFVG_250M1001, complete genome) position: , mismatch: 10, identity: 0.697

tgtaaacaaaatataattttaatcaaagtaaat	CRISPR spacer
caaaaacaaaaaataattttaataaaaaacgaa	Protospacer
.. ******** *********** ***.  .*

76. spacer 3.22|2049713|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to CP024913 (Cyanobacterium sp. HL-69 plasmid pCHL69-1, complete sequence) position: , mismatch: 10, identity: 0.697

cttttaatattttgtaatgttgaatttgaacag	CRISPR spacer
tcaataattttttgtaaggttgaatttgttgat	Protospacer
..  **** ******** **********   *

77. spacer 3.41|2050983|34|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 10, identity: 0.706

tctgttgcgcagctgcacgcacatctggattggt	CRISPR spacer
cataagccgcaactgcaagcacatctggattatt	Protospacer
. *.   ****.***** *************. *

78. spacer 3.44|2051183|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to AC171169 (Escherichia virus H8 clone h8_phage, WORKING DRAFT SEQUENCE) position: , mismatch: 10, identity: 0.697

attgttaccttaattcaacaggaagttgaaaga	CRISPR spacer
ttacaaaccgcaattcaacaggaagttgaagag	Protospacer
 *    *** .*******************...

79. spacer 3.44|2051183|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NC_031022 (Shigella phage SHSML-45, complete genome) position: , mismatch: 10, identity: 0.697

attgttaccttaattcaacaggaagttgaaaga	CRISPR spacer
ttacaaaccgcaattcaacaggaagttgaagag	Protospacer
 *    *** .*******************...

80. spacer 3.44|2051183|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NC_028754 (Salmonella phage Shivani, complete genome) position: , mismatch: 10, identity: 0.697

attgttaccttaattcaacaggaagttgaaaga	CRISPR spacer
ttacaaaccgcaattcaacaggaagttgaagag	Protospacer
 *    *** .*******************...

81. spacer 3.44|2051183|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NC_042307 (Escherichia virus H8, complete genome, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.697

attgttaccttaattcaacaggaagttgaaaga	CRISPR spacer
ttacaaaccgcaattcaacaggaagttgaagag	Protospacer
 *    *** .*******************...

82. spacer 3.54|2051854|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to CP033563 (Acinetobacter nosocomialis strain 2010S01-197 plasmid p2010S01-197-2, complete sequence) position: , mismatch: 10, identity: 0.697

ctgtattgttttgaattatttttgtataaacaa	CRISPR spacer
agctattgttttcaagtatttttgtatttctat	Protospacer
   ********* ** ***********   .*

83. spacer 3.56|2051986|34|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015592 (Bacillus cereus strain AR156 plasmid pAR460, complete sequence) position: , mismatch: 10, identity: 0.706

taaaatcaccttcccaataacctttattgtaacc	CRISPR spacer
ggaaatcaccttcccaataaaatttatatagata	Protospacer
 .******************  *****   .*.

84. spacer 3.57|2052053|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to MK250021 (Prevotella phage Lak-B2, complete genome) position: , mismatch: 10, identity: 0.697

acctaacctccattctaaataataaaagggagg	CRISPR spacer
gtataacgtccattctaaatactaaaagtacta	Protospacer
.. **** ************* ****** .  .

85. spacer 3.57|2052053|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to MK250023 (Prevotella phage Lak-B4, complete genome) position: , mismatch: 10, identity: 0.697

acctaacctccattctaaataataaaagggagg	CRISPR spacer
gtataacgtccattctaaatactaaaagtacta	Protospacer
.. **** ************* ****** .  .

86. spacer 3.60|2052253|33|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009691 (Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence) position: , mismatch: 10, identity: 0.697

accatatattttgtataaattgtatttgtggca	CRISPR spacer
cccacatattttttataaattgtatacagttcc	Protospacer
 ***.******* ************ ..   *

87. spacer 3.71|2052992|35|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024445 (Moraxella osloensis strain NP7 plasmid pNP7-2, complete sequence) position: , mismatch: 10, identity: 0.714

aaagcaataattaaagataaagaatgtatttttaa	CRISPR spacer
aaaacattaattaaagataaagaatctgatagccc	Protospacer
***.** ****************** *. *  .

88. spacer 3.71|2052992|35|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016589 (Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence) position: , mismatch: 10, identity: 0.714

aaagcaataattaaagataaagaatgtatttttaa	CRISPR spacer
cgtgtcaattttaaagataatgaatggatttttaa	Protospacer
 . *. *   ********** ***** ********

89. spacer 3.71|2052992|35|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to MW012634 (Bacillus phage DLc1, complete genome) position: , mismatch: 10, identity: 0.714

aaagcaataattaaagataaagaatgtatttttaa	CRISPR spacer
ggttatatgtttaaaggtaaagaaggtatttttaa	Protospacer
..    **. ******.******* **********

90. spacer 3.17|2049382|34|CP035281|CRISPRCasFinder,CRT matches to NZ_CP024283 (Escherichia albertii strain 2014C-4356 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.676

gaaactagataaacacaatctaaaatggacattt	CRISPR spacer
tttaagggataaatacaatctaaaatcgacaaac	Protospacer
   *  .******.************ ****  .

91. spacer 3.32|2050380|35|CP035281|CRISPRCasFinder,CRT,PILER-CR matches to KP790010 (Gordonia phage GordDuk1, complete genome) position: , mismatch: 11, identity: 0.686

attatagaggaagagagcgaccgaccggagcaaag	CRISPR spacer
gccatacaggaaaagagcgaccgaccggaatcgga	Protospacer
...*** *****.****************.. ...

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

635438 : 705804

Erysipelothrix_phage(56.82%)

holin,tail,capsid,portal,transposase,head,protease,terminase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAT42269.1\|635438_636176_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.9e-37	39.8
QAT42270.1\|636166_636988_+	hypothetical protein	NA	NA	NA	NA
QAT42271.1\|637556_639137_-	recombinase family protein	Q6DMS5	Streptococcus_phage	9.7e-141	50.1
QAT42272.1\|639129_640431_-	recombinase family protein	A0A1B0RXM0	Streptococcus_phage	9.3e-73	45.1
QAT42273.1\|640644_641046_-	RNA polymerase subunit sigma-70	NA	NA	NA	NA
QAT44066.1\|641171_642125_-	LysM peptidoglycan-binding domain-containing protein	H7BVK7	unidentified_phage	3.8e-47	47.4
QAT42274.1\|642111_642531_-\|holin	holin	A0A2K5B2A2	Erysipelothrix_phage	2.9e-52	70.6
QAT42275.1\|642601_645067_-	glycosyl hydrolase	A0A2K5B2A1	Erysipelothrix_phage	0.0e+00	77.6
QAT42276.1\|645066_645630_-	hypothetical protein	A0A2K5B2A0	Erysipelothrix_phage	9.3e-70	65.6
QAT42277.1\|645622_645820_-	hypothetical protein	A0A2K5B299	Erysipelothrix_phage	1.6e-24	72.3
QAT42278.1\|645832_648358_-	hypothetical protein	A0A2K5B298	Erysipelothrix_phage	0.0e+00	74.8
QAT42279.1\|648362_649139_-\|tail	phage tail family protein	A0A2I4R672	Erysipelothrix_phage	5.5e-105	68.2
QAT42280.1\|649155_651651_-\|tail	phage tail protein	A0A2K5B297	Erysipelothrix_phage	5.9e-108	74.5
QAT42281.1\|651856_652240_-	hypothetical protein	A0A2K5B295	Erysipelothrix_phage	9.8e-47	78.2
QAT42282.1\|652253_652850_-\|tail	phage tail protein	A0A2K5B294	Erysipelothrix_phage	8.8e-87	81.9
QAT42283.1\|652853_653195_-	hypothetical protein	A0A2K5B293	Erysipelothrix_phage	1.9e-33	60.4
QAT42284.1\|653191_653623_-	HK97 gp10 family phage protein	A0A2K5B292	Erysipelothrix_phage	3.3e-51	69.9
QAT42285.1\|653609_653951_-\|head,tail	head-tail adaptor protein	A0A2K5B291	Erysipelothrix_phage	6.4e-42	74.1
QAT42286.1\|653953_654265_-\|head,tail	phage gp6-like head-tail connector protein	A0A2K5B290	Erysipelothrix_phage	5.5e-40	81.0
QAT42287.1\|654283_655486_-\|capsid	phage major capsid protein	A0A2I4R671	Erysipelothrix_phage	8.2e-108	51.5
QAT42288.1\|655492_656224_-\|protease	Clp protease ClpP	Q6DMU1	Streptococcus_phage	4.6e-69	66.1
QAT42289.1\|656120_657485_-\|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	3.4e-190	77.1
QAT42290.1\|657500_659066_-\|terminase	terminase large subunit	A0A2K5B285	Erysipelothrix_phage	1.3e-270	84.0
QAT42291.1\|659147_659453_-	hypothetical protein	A0A2K9VGV4	Faecalibacterium_phage	6.0e-07	54.7
QAT44067.1\|659424_659685_-	hypothetical protein	NA	NA	NA	NA
QAT42292.1\|659823_660000_-	DUF5049 domain-containing protein	NA	NA	NA	NA
QAT42293.1\|659989_660226_-	DUF4314 domain-containing protein	A0A2K5B281	Erysipelothrix_phage	4.1e-19	62.5
QAT42294.1\|660216_660918_-	virulence protein	A0A2K5B280	Erysipelothrix_phage	1.7e-60	51.5
QAT42295.1\|661009_662914_-	DNA (cytosine-5-)-methyltransferase	A0A2K9V3X0	Faecalibacterium_phage	4.3e-34	63.2
QAT42296.1\|662906_664142_-	DNA modification methylase	A0A2I4R670	Erysipelothrix_phage	1.1e-176	71.5
QAT42297.1\|664138_664921_-	S-adenosylmethionine synthetase	NA	NA	NA	NA
QAT42298.1\|664923_665469_-\|terminase	terminase	A0A2K5B277	Erysipelothrix_phage	4.5e-61	64.6
QAT42299.1\|665589_665949_-	HNH endonuclease	A0A2K5B276	Erysipelothrix_phage	1.1e-39	61.5
QAT44068.1\|666072_666534_-	hypothetical protein	NA	NA	NA	NA
QAT42300.1\|666591_667956_-	DEAD/DEAH box helicase	A0A1X9I6B0	Streptococcus_phage	3.9e-154	59.4
QAT44069.1\|667936_668218_-	VRR-NUC domain-containing protein	M1PFY8	Streptococcus_phage	1.3e-27	65.6
QAT42301.1\|668360_670637_-	DNA primase	E4ZFK6	Streptococcus_phage	6.4e-202	48.6
QAT42302.1\|670636_670960_-	hypothetical protein	NA	NA	NA	NA
QAT42303.1\|670943_671381_-	hypothetical protein	A0A2K5B270	Erysipelothrix_phage	5.7e-43	58.9
QAT42304.1\|671461_673402_-	hypothetical protein	A0A2K5B2B0	Erysipelothrix_phage	6.9e-282	71.4
QAT42305.1\|673649_674225_-	DUF2815 family protein	E4ZFK3	Streptococcus_phage	4.2e-70	73.0
QAT42306.1\|674226_675354_-	DUF2800 domain-containing protein	Q6DMW2	Streptococcus_phage	4.7e-121	56.2
QAT42307.1\|675343_675655_-	DNA ligase	A0A2K5B2A7	Erysipelothrix_phage	4.5e-10	42.9
QAT44070.1\|675590_675797_-	hypothetical protein	NA	NA	NA	NA
QAT42308.1\|675939_676467_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
QAT42309.1\|677115_677316_+	XRE family transcriptional regulator	A0A2K5B261	Erysipelothrix_phage	2.5e-09	45.3
QAT42310.1\|677335_678400_+	DNA cytosine methyltransferase	A0A191SB20	Nostoc_phage	1.8e-29	30.0
QAT42311.1\|678396_679461_+	DNA cytosine methyltransferase	A7XXH6	Thermus_virus	7.2e-31	28.7
QAT42312.1\|679463_680816_+	hypothetical protein	NA	NA	NA	NA
QAT42313.1\|680827_682771_+	hypothetical protein	M1NSM1	Streptococcus_phage	2.5e-37	35.5
QAT42314.1\|682767_684240_+	LlaJI family restriction endonuclease	NA	NA	NA	NA
QAT42315.1\|684330_686223_+	transcriptional regulator	E4ZFJ9	Streptococcus_phage	1.0e-83	29.6
QAT42316.1\|686254_687604_+	hypothetical protein	NA	NA	NA	NA
QAT44071.1\|688348_689671_+	hypothetical protein	A0A2R2ZGJ6	Clostridioides_phage	5.1e-18	41.9
QAT42317.1\|689685_690366_+	hypothetical protein	NA	NA	NA	NA
QAT42318.1\|690378_690618_+	hypothetical protein	NA	NA	NA	NA
QAT42319.1\|690634_691741_+	hypothetical protein	NA	NA	NA	NA
QAT42320.1\|691744_692527_+	hypothetical protein	NA	NA	NA	NA
QAT42321.1\|692703_692955_+	hypothetical protein	NA	NA	NA	NA
QAT42322.1\|693519_693861_+	ArsR family transcriptional regulator	A0A2H4PQT4	Staphylococcus_phage	8.8e-15	42.9
QAT42323.1\|693848_695498_+	dehydrogenase	NA	NA	NA	NA
QAT42324.1\|695494_696559_+	ACR3 family arsenite efflux transporter	NA	NA	NA	NA
QAT42325.1\|696581_696953_+	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA
QAT42326.1\|696953_698690_+	arsenical pump-driving ATPase	NA	NA	NA	NA
QAT42327.1\|699053_699989_+	recombinase family protein	D0R0F3	Streptococcus_phage	2.3e-65	45.3
QAT42328.1\|700126_700309_+	DNA-binding protein	NA	NA	NA	NA
QAT42329.1\|700327_701749_+	FRG domain-containing protein	NA	NA	NA	NA
QAT42330.1\|701741_702488_+	hypothetical protein	NA	NA	NA	NA
QAT42331.1\|702484_703615_+\|protease	ATP-dependent Clp protease ATP-binding subunit	NA	NA	NA	NA
QAT42332.1\|703736_704300_+	hypothetical protein	NA	NA	NA	NA
QAT42333.1\|705290_705524_-	hypothetical protein	NA	NA	NA	NA
QAT42334.1\|705495_705804_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

2062242 : 2081815

Geobacillus_phage(27.78%)

holin,tail,capsid,portal,head,protease,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAT43427.1\|2062242_2062491_-\|holin	phage holin	A0A1Q1PW49	Staphylococcus_phage	4.0e-09	39.5
QAT43428.1\|2062480_2062687_-	hypothetical protein	NA	NA	NA	NA
QAT43429.1\|2062696_2063428_-	M23 family metallopeptidase	A0A2L1IVP0	Streptomyces_phage	3.6e-13	49.0
QAT43430.1\|2063409_2063640_-	hypothetical protein	NA	NA	NA	NA
QAT43431.1\|2063887_2064148_-	hypothetical protein	NA	NA	NA	NA
QAT43432.1\|2064156_2065176_-	hypothetical protein	NA	NA	NA	NA
QAT43433.1\|2065255_2065750_+	hypothetical protein	NA	NA	NA	NA
QAT43434.1\|2065746_2067594_-	hypothetical protein	A0A0U4B063	Bacillus_phage	6.5e-104	43.5
QAT43435.1\|2067593_2068127_-	hypothetical protein	NA	NA	NA	NA
QAT43436.1\|2068137_2068536_-	hypothetical protein	NA	NA	NA	NA
QAT43437.1\|2068535_2069084_-	hypothetical protein	NA	NA	NA	NA
QAT43438.1\|2069080_2071381_-\|tail	phage tail protein	A0A0S2SXL7	Bacillus_phage	2.1e-43	32.6
QAT43439.1\|2071608_2071980_-	hypothetical protein	Q0H232	Geobacillus_phage	9.5e-23	49.6
QAT43440.1\|2071990_2072812_-	hypothetical protein	Q0H233	Geobacillus_phage	5.2e-45	51.4
QAT43441.1\|2072824_2073130_-	hypothetical protein	M1Q1Z4	Streptococcus_phage	6.4e-25	55.4
QAT43442.1\|2073113_2073527_-	HK97 gp10 family phage protein	Q9AZY1	Lactococcus_phage	6.7e-17	42.1
QAT43443.1\|2073504_2073843_-\|head,tail	phage head-tail adapter protein	A6XMK0	Bacillus_virus	7.3e-30	60.8
QAT43444.1\|2073848_2074118_-	hypothetical protein	A6XMJ8	Bacillus_virus	8.1e-32	72.7
QAT43445.1\|2074132_2075809_-\|capsid	phage major capsid protein	A6XMJ6	Bacillus_virus	4.9e-135	66.7
QAT43446.1\|2075799_2076384_-\|head,protease	HK97 family phage prohead protease	Q0H262	Geobacillus_phage	1.6e-64	66.0
QAT43447.1\|2076380_2077586_-\|portal	phage portal protein	A6XMJ5	Bacillus_virus	1.5e-157	68.1
QAT43448.1\|2077586_2079422_-\|terminase	terminase large subunit	Q0H264	Geobacillus_phage	7.4e-225	64.2
QAT43449.1\|2079412_2079763_-\|terminase	P27 family phage terminase small subunit	A0A0U4JV93	Exiguobacterium_phage	2.1e-27	59.3
QAT43450.1\|2079874_2080201_-	HNH endonuclease	Q0H266	Geobacillus_phage	4.9e-23	52.2
QAT43451.1\|2080210_2080441_-	hypothetical protein	A0A223LEC3	Bacillus_phage	1.1e-13	45.6
QAT43452.1\|2080540_2080957_-	hypothetical protein	NA	NA	NA	NA
QAT43453.1\|2081011_2081815_-	hypothetical protein	I2E8X7	Clostridium_phage	3.4e-33	35.4

DBSCAN-SWA_3

2086968 : 2096816

uncultured_Caudovirales_phage(11.11%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAT43463.1\|2086968_2087292_-	nucleotide pyrophosphohydrolase	A0A2H4J7H8	uncultured_Caudovirales_phage	1.4e-25	53.7
QAT44141.1\|2087334_2087760_-	RusA family crossover junction endodeoxyribonuclease	NA	NA	NA	NA
QAT43464.1\|2087746_2088415_-	hypothetical protein	NA	NA	NA	NA
QAT43465.1\|2088411_2089218_-	hypothetical protein	A6XMI1	Bacillus_virus	2.8e-19	28.3
QAT43466.1\|2089150_2089957_-	DUF4373 domain-containing protein	A0A0H4TKJ7	Bacillus_phage	1.0e-21	34.5
QAT43467.1\|2089979_2090252_-	hypothetical protein	NA	NA	NA	NA
QAT43468.1\|2090235_2091132_-	hypothetical protein	A0A290GJV0	Caldibacillus_phage	9.6e-53	39.5
QAT44142.1\|2091091_2091988_-	recombinase RecT	S0A2Z5	Cellulophaga_phage	8.1e-60	48.1
QAT43469.1\|2092228_2092603_-	DUF3846 domain-containing protein	A0A2K9V361	Faecalibacterium_phage	3.9e-08	35.3
QAT43470.1\|2092617_2092950_-	hypothetical protein	NA	NA	NA	NA
QAT43471.1\|2093387_2093582_-	hypothetical protein	NA	NA	NA	NA
QAT43472.1\|2093591_2093858_-	stage V sporulation protein S	A0A1J0GVV0	Streptomyces_phage	5.1e-10	49.4
QAT43473.1\|2094123_2094258_+	hypothetical protein	NA	NA	NA	NA
QAT43474.1\|2094443_2094647_-	DNA-binding protein	NA	NA	NA	NA
QAT43475.1\|2094726_2094930_-	XRE family transcriptional regulator	NA	NA	NA	NA
QAT43476.1\|2095084_2095477_+	XRE family transcriptional regulator	A0A1X9I660	Streptococcus_phage	8.8e-19	61.4
QAT43477.1\|2095493_2095718_+	hypothetical protein	NA	NA	NA	NA
QAT43478.1\|2095898_2096816_+	Abi family protein	A3QSC6	Clostridium_virus	4.9e-44	37.0

DBSCAN-SWA_4

2160965 : 2167905

Paenibacillus_phage(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAT43534.1\|2160965_2161580_-	RNA polymerase sporulation sigma factor SigH	R9TNI5	Paenibacillus_phage	2.7e-06	25.0
QAT43535.1\|2161563_2162361_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
QAT43536.1\|2162320_2162806_-	dihydrofolate reductase	D0VXF2	Bacillus_phage	2.9e-19	37.7
QAT43537.1\|2162871_2163702_-	thymidylate synthase	A0A0H3V0R8	Geobacillus_virus	2.0e-68	46.4
QAT43538.1\|2163727_2164141_-	ribonuclease III	NA	NA	NA	NA
QAT43539.1\|2164231_2165629_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	8.5e-56	33.1
QAT43540.1\|2165766_2167068_-	LysM peptidoglycan-binding domain-containing protein	A0A7K9	Microcystis_virus	4.7e-16	43.1
QAT43541.1\|2167416_2167905_-	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	2.3e-24	43.6

DBSCAN-SWA_5

2542613 : 2552417

Prochlorococcus_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAT43859.1\|2542613_2544146_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	1.2e-66	45.6
QAT43860.1\|2544204_2544792_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	7.5e-22	35.1
QAT43861.1\|2544785_2545817_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	1.0e-69	44.1
QAT43862.1\|2545828_2547256_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.7e-56	32.6
QAT43863.1\|2547325_2548030_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	E3SPA9	Prochlorococcus_phage	9.6e-40	38.1
QAT43864.1\|2548096_2548576_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	8.2e-27	45.8
QAT43865.1\|2548586_2552417_-	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	2.3e-34	27.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP035281

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection