CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP035366	Escherichia coli O157:H7 strain C1-057 chromosome, complete genome	4 crisprs	DinG,PrimPol,cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	1	7	14	0
CP035367	Escherichia coli O157:H7 strain C1-057 plasmid pC1-057, complete sequence	0 crisprs	NA	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP035366_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP035366_1

72803-72937

Orphan

Consensus_repeat	Method
TGCCGGATGCGCGTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP035366_1

>merge|CP035366|1|72803-72937|CRISPRCasFinder
TGCCGGATGCGCGTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCAGGCGCTGAATGCCGGATGCGCGTTGCTTATCCGGCCTACAAAATTGCAGCGTGTAGGCC

>CP035366|1|1|72803-72937|CRISPRCasFinder
TGCCGGATGCGCGTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCC	AGATAAGACGCGTCAGCGTCGCATCAGGCGCTGAA
TGCCGGATGCGCGTTGCTTATCCGGCCTACAAAATTGCAGCGTGTAGGCC

Protein	Signature genes	Signature genes Name	Protein_function
CP035366.1\|QAV71775.1\|79037_80648_-\|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP	unknown	unknown	gnl\|CDD\|181853
CP035366.1\|QAV71766.1\|63875_65089_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
CP035366.1\|QAV71772.1\|74501_76202_-\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
CP035366.1\|QAV71763.1\|58385_59672_-\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
CP035366.1\|QAV71778.1\|82776_84435_-\|HTH-type-transcriptional-regulator-SgrR	unknown	unknown	gnl\|CDD\|184188
CP035366.1\|QAV71764.1\|59724_62079_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
CP035366.1\|QAV76635.1\|84523_84655_+\|glucose-uptake-inhibitor-SgrT	unknown	unknown	gnl\|CDD\|374203
CP035366.1\|QAV71767.1\|65926_66586_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
CP035366.1\|QAV71777.1\|81978_82548_+\|type-III-effector	unknown	unknown	unknown
CP035366.1\|QAV71768.1\|66597_69504_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
CP035366.1\|QAV71771.1\|72988_74491_-\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
CP035366.1\|QAV71762.1\|57396_58386_-\|4-hydroxythreonine-4-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|234696
CP035366.1\|QAV71765.1\|62333_63149_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
CP035366.1\|QAV76634.1\|76540_77419_+\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
CP035366.1\|QAV71773.1\|77504_78269_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
CP035366.1\|QAV71761.1\|56578_57400_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
CP035366.1\|QAV71769.1\|69667_72019_-\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
CP035366.1\|QAV71774.1\|78355_79054_-\|thiamine-ABC-transporter-ATP-binding-protein-ThiQ	unknown	unknown	gnl\|CDD\|182716
CP035366.1\|QAV71776.1\|80623_81607_-\|thiamine-ABC-transporter-substrate-binding-subunit	unknown	unknown	gnl\|CDD\|236883
CP035366.1\|QAV71770.1\|72093_72789_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181

Protein	Function_ID	Function_description	E-value
CP035366.1\|QAV71775.1\|79037_80648_-\|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP	gnl\|CDD\|181853	PRK09433, thiP, thiamine transporter membrane protein; Reviewed.	0
CP035366.1\|QAV71766.1\|63875_65089_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.21825e-157
CP035366.1\|QAV71772.1\|74501_76202_-\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
CP035366.1\|QAV71763.1\|58385_59672_-\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
CP035366.1\|QAV71778.1\|82776_84435_-\|HTH-type-transcriptional-regulator-SgrR	gnl\|CDD\|184188	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR.	0
CP035366.1\|QAV71764.1\|59724_62079_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
CP035366.1\|QAV76635.1\|84523_84655_+\|glucose-uptake-inhibitor-SgrT	gnl\|CDD\|374203	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT.	0.00111324
CP035366.1\|QAV71767.1\|65926_66586_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	5.25024e-158
CP035366.1\|QAV71768.1\|66597_69504_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
CP035366.1\|QAV71771.1\|72988_74491_-\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
CP035366.1\|QAV71762.1\|57396_58386_-\|4-hydroxythreonine-4-phosphate-dehydrogenase	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
CP035366.1\|QAV71765.1\|62333_63149_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	1.09407e-169
CP035366.1\|QAV76634.1\|76540_77419_+\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
CP035366.1\|QAV71773.1\|77504_78269_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.79494e-49
CP035366.1\|QAV71761.1\|56578_57400_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	2.27697e-148
CP035366.1\|QAV71769.1\|69667_72019_-\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
CP035366.1\|QAV71774.1\|78355_79054_-\|thiamine-ABC-transporter-ATP-binding-protein-ThiQ	gnl\|CDD\|182716	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ.	5.93317e-163
CP035366.1\|QAV71776.1\|80623_81607_-\|thiamine-ABC-transporter-substrate-binding-subunit	gnl\|CDD\|236883	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional.	0
CP035366.1\|QAV71770.1\|72093_72789_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	3.528e-179

>CP035366.1|QAV71770.1|72093_72789_-|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPSGVDYSIMTADDMVVVSIETGEVVEGAKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ
>CP035366.1|QAV71769.1|69667_72019_-|DNA-polymerase-II
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILRGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPVWVEGDMHNGAIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGPENGDASALDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRIPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLVSSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEATKIGRALVQHVNVWWAETLQKQQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYFRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF
>CP035366.1|QAV71768.1|66597_69504_-|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ
>CP035366.1|QAV71767.1|65926_66586_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFRERVPKKQYVTRVWGHPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPADF
>CP035366.1|QAV71766.1|63875_65089_+|IS3-family-transposase
MTKNTRFSPEVRQRAIRMVLESQDEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTSAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKKLMPLLDKLREQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQHDDWLKREIQRVYDENHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTIHHSDKGSQYVSLAYTERLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLGRLGHTPPAEAEKAYYASIGNDDLAA
>CP035366.1|QAV71765.1|62333_63149_+|co-chaperone-DjlA
MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQFGGGYQQQSGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK
>CP035366.1|QAV71764.1|59724_62079_-|LPS-assembly-protein-LptD
MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQGDTNDLPVTINANHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVSIFYSPYLQLPVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWNHSGVMDQVWRFNVDYTKVSDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEPQLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTEAKLLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTLEPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRIYDDAAVERFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRGGIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGISQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWDNDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNTL
>CP035366.1|QAV71763.1|58385_59672_-|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN
>CP035366.1|QAV71762.1|57396_58386_-|4-hydroxythreonine-4-phosphate-dehydrogenase
MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTDRAAMLGLPLTLRPYSPNSPAQPQTTGTLTLLPVALRESVTAGQLAIENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLDELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGEADVGSFITALNLAIKMIVNTQ
>CP035366.1|QAV71761.1|56578_57400_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPFQES
>CP035366.1|QAV71771.1|72988_74491_-|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVKALNTEAKLPCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQFHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERIGSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDVNALVDEYESCYTMTPATQIHGEKRQNVLEAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFEKGNDLVLGSHMLEVCPSIAAEEKPILDVQHLGIGGKDDPARLIFNTQTGPAIVASLIDLGDRYRLLVNCIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR
>CP035366.1|QAV71772.1|74501_76202_-|ribulokinase
MAIAIGLDFGSDSVRALAVDCTTGEEIATSVEWYPRWQKGQFCDAPNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKILHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLPPASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAGQSAFGDIYAWFGRVLGWPLEQLAAQHPELKEQIDASQKQLLPALTEAWAKNPSLDHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPRSEQAQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVPTL
>CP035366.1|QAV76634.1|76540_77419_+|arabinose-operon-transcriptional-regulator-AraC
MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRAYWHEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCEEKVNDVAVKLS
>CP035366.1|QAV71773.1|77504_78269_+|DedA-family-protein
MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLVRHPLMPVYIDILRKVVGV
>CP035366.1|QAV71774.1|78355_79054_-|thiamine-ABC-transporter-ATP-binding-protein-ThiQ
MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNLIAGFLTPASGALTIDGVDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAVQQEKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGMTNELLSGKASASALLGITG
>CP035366.1|QAV71775.1|79037_80648_-|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP
MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGDWSAVWQDSYLWHVVRFSFWQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGWLASLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPGEQRQLAAQLGMRGWHFFRFVEWPWLRRQIPPVTALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDPARAAMLALIQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDRLHSRICDTMLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQALEMSGMLILAMPGIVLATGFFLLLNNTIGLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFSVIEKIPGRNVKTD
>CP035366.1|QAV71776.1|80623_81607_-|thiamine-ABC-transporter-substrate-binding-subunit
MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDIFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQAWISEWQRAVSR
>CP035366.1|QAV71777.1|81978_82548_+|type-III-effector
MKVRNPEQISIPASNTTKDPGLTNSQIIRMANLVKKTENMNIFEELWETLRNLFQSDKHSQTAARQILKDAFYFQNSDDYSKYFTGAVDGKARDKLTHWLIKFNELKEYAKDPENMAAKASLSPEGTLCVSFFIGDEAIFTLELQLKKSTRTGGIDLSNAYFNGVVICGIDCLEVDLSNAETNNSRWYD
>CP035366.1|QAV71778.1|82776_84435_-|HTH-type-transcriptional-regulator-SgrR
MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIADIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRNSTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEGCYYLLFDSRTHRGANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHARTITSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLEIKEISYDQWHEGEIESDIWLNSANFTLPLDFSLFAHLCEVPLLQHCIPIDWQVDAARWRNGEMNLANWCQQLVASKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDPE
>CP035366.1|QAV76635.1|84523_84655_+|glucose-uptake-inhibitor-SgrT
MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEELMQWEGSHSDY

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Crispr_ID: CP035366_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP035366_3

3576120-3576332

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACACA	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACACA	PILER-CR

3 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of CP035366_3

>merge|CP035366|3|3576120-3576332|CRISPRCasFinder,CRT,PILER-CR
CGGTTTATCCCCGCTGATGCGGGGAACACAGCGGCACGCTGGATTGAACAAATCCCTGGGCCGGTTTATCCCCGCTGGCGCGGGGAACACAAACCGAAACACACGATCAATCCGAATATGAGCGGTTTATCCCCGCTGGCGCGGGGAACACTTTGGTGACAGTTTTTGTCACTGTTTTGGTGACGGTTTATCCCCGCTGGCGCGGGGAACACA

>CP035366|3|2|3576120-3576331|CRISPRCasFinder
CGGTTTATCCCCGCTGATGCGGGGAACAC	AGCGGCACGCTGGATTGAACAAATCCCTGGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AAACCGAAACACACGATCAATCCGAATATGAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTGGTGACAGTTTTTGTCACTGTTTTGGTGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>CP035366|3|1|3576120-3576332|CRT
CGGTTTATCCCCGCTGATGCGGGGAACACA	GCGGCACGCTGGATTGAACAAATCCCTGGGC
CGGTTTATCCCCGCTGGCGCGGGGAACACA	AACCGAAACACACGATCAATCCGAATATGAG
CGGTTTATCCCCGCTGGCGCGGGGAACACT	TTGGTGACAGTTTTTGTCACTGTTTTGGTGA
CGGTTTATCCCCGCTGGCGCGGGGAACACA

>CP035366|3|2|3576181-3576332|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACACA	AACCGAAACACACGATCAATCCGAATATGAG
CGGTTTATCCCCGCTGGCGCGGGGAACACT	TTGGTGACAGTTTTTGTCACTGTTTTGGTGA
CGGTTTATCCCCGCTGGCGCGGGGAACACA

Protein	Signature genes	Signature genes Name	Protein_function
CP035366.1\|QAV75001.1\|3573840_3574749_-\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP035366.1\|QAV74997.1\|3570928_3571240_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
CP035366.1\|QAV75003.1\|3576427_3576721_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
CP035366.1\|QAV75009.1\|3580626_3582189_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP035366.1\|QAV75010.1\|3582286_3584986_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP035366.1\|QAV75008.1\|3580093_3580630_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
CP035366.1\|QAV75002.1\|3575000_3576038_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP035366.1\|QAV75000.1\|3572411_3573839_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
CP035366.1\|QAV75004.1\|3576717_3577641_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
CP035366.1\|QAV74993.1\|3567932_3568694_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
CP035366.1\|QAV74995.1\|3569720_3570200_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP035366.1\|QAV74998.1\|3571433_3571757_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
CP035366.1\|QAV74999.1\|3571806_3572412_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
CP035366.1\|QAV75012.1\|3585593_3586328_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP035366.1\|QAV75006.1\|3578269_3579016_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
CP035366.1\|QAV75005.1\|3577637_3578288_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
CP035366.1\|QAV75011.1\|3585177_3585330_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
CP035366.1\|QAV74994.1\|3568674_3569724_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
CP035366.1\|QAV74996.1\|3570199_3570910_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
CP035366.1\|QAV75007.1\|3579026_3580082_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843

Protein	Function_ID	Function_description	E-value
CP035366.1\|QAV75001.1\|3573840_3574749_-\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP035366.1\|QAV74997.1\|3570928_3571240_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
CP035366.1\|QAV75003.1\|3576427_3576721_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	2.35543e-65
CP035366.1\|QAV75009.1\|3580626_3582189_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
CP035366.1\|QAV75010.1\|3582286_3584986_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
CP035366.1\|QAV75008.1\|3580093_3580630_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	3.2742e-30
CP035366.1\|QAV75002.1\|3575000_3576038_+\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP035366.1\|QAV75000.1\|3572411_3573839_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
CP035366.1\|QAV75004.1\|3576717_3577641_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	7.06391e-157
CP035366.1\|QAV74993.1\|3567932_3568694_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
CP035366.1\|QAV74995.1\|3569720_3570200_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
CP035366.1\|QAV74998.1\|3571433_3571757_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	3.44794e-52
CP035366.1\|QAV74999.1\|3571806_3572412_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
CP035366.1\|QAV75012.1\|3585593_3586328_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	5.85899e-137
CP035366.1\|QAV75006.1\|3578269_3579016_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.00414e-48
CP035366.1\|QAV75005.1\|3577637_3578288_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	5.5854e-93
CP035366.1\|QAV75011.1\|3585177_3585330_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	8.32243e-12
CP035366.1\|QAV74994.1\|3568674_3569724_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
CP035366.1\|QAV74996.1\|3570199_3570910_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	6.38982e-120
CP035366.1\|QAV75007.1\|3579026_3580082_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.45802e-155

>CP035366.1|QAV75002.1|3575000_3576038_+|aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPQSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>CP035366.1|QAV75001.1|3573840_3574749_-|sulfate-adenylyltransferase-subunit-2
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHQNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>CP035366.1|QAV75000.1|3572411_3573839_-|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRSRVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGEK
>CP035366.1|QAV74999.1|3571806_3572412_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>CP035366.1|QAV74998.1|3571433_3571757_-|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLMTVGIMFGALFMWLLG
>CP035366.1|QAV74997.1|3570928_3571240_-|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>CP035366.1|QAV74996.1|3570199_3570910_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVYALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGAAITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>CP035366.1|QAV74995.1|3569720_3570200_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>CP035366.1|QAV74994.1|3568674_3569724_-|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELVELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>CP035366.1|QAV74993.1|3567932_3568694_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW
>CP035366.1|QAV75003.1|3576427_3576721_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ
>CP035366.1|QAV75004.1|3576717_3577641_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARRSVDQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFRSTKLTGKLIPLIEKVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRGG
>CP035366.1|QAV75005.1|3577637_3578288_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESETFTIECRSFVPELRTGQQLCFNLRANPTICKAGKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEV
>CP035366.1|QAV75006.1|3578269_3579016_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSAPDLLSAIISRRDYYTDAWWMVAVATTPDAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNASDVLRNAYQQYQDSFRELKVSLPKLQDECWWEGEHDGLVASKILRRRDVPLNRQQWLFGERTINQGPWLSKEEPCTSQE
>CP035366.1|QAV75007.1|3579026_3580082_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEEKKAIEWAAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLALLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTEQPRSLAAAFYEPINGTRQLDVAVQRITTLRENMNTVYEQKTECASFDVMNKQGSMKDVLDFICA
>CP035366.1|QAV75008.1|3580093_3580630_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKEEHKATLRKWHEELQEKRGERASLRRSTTVNDVCLTDGFRLFLKNRQIKWQDEPEWRITALALIAALSANVKAIDERLPFAAQLAAVMSKGRFTRLSAVKTPDELLRQLRRVVRLLNGSVNLDSLAEGVFRWCQESDDLLNHHRRHQRPTEFIRIRWALEYYQAGDVDNEQNQ
>CP035366.1|QAV75009.1|3580626_3582189_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADLQGAAWQFLLGLLQSSFAPKDYRRWDDIWEDGLEAEKLREALLSLEHPFQFGPDSPSFMQDFEVLMGDKVQVASLLPEIPGAQTTKFNKDHFIKRGVTEHVCSHCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYQGNQQAPLWRKLWLNVMPQDEADLPLPKKFDDLVFPWLGPTRTSELAGAVVTDDQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQSDALLSLMTTKNYGANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLNKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRLVRQIEEGQDADELLGKWQKEIWLFARQDFDERVFTNPYEPVDLERVMTARKKYFTTSAEKQSAKAAREKKQEAAE
>CP035366.1|QAV75010.1|3582286_3584986_-|CRISPR-associated-helicase/endonuclease-Cas3
MRKYPLSLLKDKNIVTFFDFWGKTRRGEKEGGDGYHLLCWHSLDVAAMGYLMVKRNCFGLADYFRQLGISDKEQAAQFFAWLLCWHDIGKFARSFQQLYLAPELKIPEGSRKNYEKISHSTLGYWLWNYYLSECEELLPSSSLSSRKLTRVIEMWMSITTGHHGRPPDRIDELDNFLPEDKAAARDFLLEIKALFPLIEIPTFWDDDEGVELLKQLSWYISATVVLADWTGSSTRFFPRVAHPMDIKDYWQKTLVQAQNALTVFPPKAETAPFTGINTLFPFIEHPTPLQQKVLDLDISQPGPQLFILEDVTGAGKTEAALILAHRLMAARKAQGLFFGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTFSQGCAAWFANSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGTEGQQEAPFLEKDDYPWLTHVTKSDVNSHRVATRKDVERSVSVGWLHSEQESIARIESAVSQGKCIAWIRNSVDDAIKVHRQLLARGVIPASSLSLFHSRFAFSDRQRIEMETLARFGKEDGSQRAGKVLICTQVLEQSVDCDLDEMISDLAPVDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDAPGDEWFGSAMRNSAYVYPDHGRIWLTQRVLREQGAIQMPHAARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRAMAKKFVLNFKPGYAANINDYLPEKLSTRLAEESVSLWLATCIAGVVKPYATGAHAWEMSVVRVRRSWWKKHRDEFSLLEGEAFRQWCIEQRQDPEMANVILVTDDESCGYSAREGLIGKVD
>CP035366.1|QAV75011.1|3585177_3585330_-|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>CP035366.1|QAV75012.1|3585593_3586328_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAQLEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKNGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG

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Crispr_ID: CP035366_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP035366_4

3601962-3602050

Unclear

I-E

Consensus_repeat	Method
GGTTTATCCCCACTGGCGCGGGGAACTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP035366_4

>merge|CP035366|4|3601962-3602050|CRISPRCasFinder
GGTTTATCCCCACTGGCGCGGGGAACTCCTCGACTTTAATTTTTTCGCTGCCCGCTTTTGCGGTTTATCCCCGCTGGCGCGGGGAACTC

>CP035366|4|3|3601962-3602050|CRISPRCasFinder
GGTTTATCCCCACTGGCGCGGGGAACTC	CTCGACTTTAATTTTTTCGCTGCCCGCTTTTGC
GGTTTATCCCCGCTGGCGCGGGGAACTC

Protein	Signature genes	Signature genes Name	Protein_function
CP035366.1\|QAV75025.1\|3603849_3604524_+\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
CP035366.1\|QAV75026.1\|3604757_3605906_+\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
CP035366.1\|QAV75028.1\|3608262_3609900_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
CP035366.1\|QAV75014.1\|3588113_3589913_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
CP035366.1\|QAV75023.1\|3602389_3603061_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP035366.1\|QAV75030.1\|3610989_3611325_-\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
CP035366.1\|QAV76809.1\|3605902_3606817_+\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
CP035366.1\|QAV76808.1\|3597501_3598287_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
CP035366.1\|QAV75020.1\|3595977_3597432_-\|FAD-linked-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
CP035366.1\|QAV75015.1\|3590228_3590594_+\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP035366.1\|QAV75029.1\|3610127_3610919_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP035366.1\|QAV75016.1\|3590671_3591943_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
CP035366.1\|QAV75021.1\|3598605_3599883_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
CP035366.1\|QAV75024.1\|3603215_3603836_+\|LemA-family-protein	unknown	unknown	gnl\|CDD\|224618
CP035366.1\|QAV75027.1\|3606876_3608175_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
CP035366.1\|QAV75018.1\|3592210_3592786_+\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
CP035366.1\|QAV75019.1\|3593790_3594570_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
CP035366.1\|QAV75017.1\|3591933_3592194_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
CP035366.1\|QAV75022.1\|3599909_3601388_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
CP035366.1\|QAV75031.1\|3611324_3611573_-\|MazF-MazE-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082

Protein	Function_ID	Function_description	E-value
CP035366.1\|QAV75025.1\|3603849_3604524_+\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	3.44494e-83
CP035366.1\|QAV75026.1\|3604757_3605906_+\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	5.38776e-66
CP035366.1\|QAV75028.1\|3608262_3609900_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP035366.1\|QAV75014.1\|3588113_3589913_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP035366.1\|QAV75023.1\|3602389_3603061_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
CP035366.1\|QAV75030.1\|3610989_3611325_-\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
CP035366.1\|QAV76809.1\|3605902_3606817_+\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	1.30872e-104
CP035366.1\|QAV76808.1\|3597501_3598287_-\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	2.24046e-138
CP035366.1\|QAV75020.1\|3595977_3597432_-\|FAD-linked-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	4.96301e-83
CP035366.1\|QAV75015.1\|3590228_3590594_+\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	9.8593e-60
CP035366.1\|QAV75029.1\|3610127_3610919_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	1.24402e-159
CP035366.1\|QAV75016.1\|3590671_3591943_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	4.44674e-126
CP035366.1\|QAV75021.1\|3598605_3599883_+\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	7.69151e-30
CP035366.1\|QAV75024.1\|3603215_3603836_+\|LemA-family-protein	gnl\|CDD\|224618	COG1704, LemA, Uncharacterized conserved protein [Function unknown].	2.13345e-77
CP035366.1\|QAV75027.1\|3606876_3608175_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP035366.1\|QAV75018.1\|3592210_3592786_+\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	1.96043e-88
CP035366.1\|QAV75019.1\|3593790_3594570_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.2806e-65
CP035366.1\|QAV75017.1\|3591933_3592194_+\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	1.18571e-41
CP035366.1\|QAV75022.1\|3599909_3601388_+\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.25899e-108
CP035366.1\|QAV75031.1\|3611324_3611573_-\|MazF-MazE-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48

>CP035366.1|QAV75022.1|3599909_3601388_+|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMEKFNIPRHMLFDVQMPGTVLGQITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFIPIESNAKRYDAMNKGIFKALTKHTDVILKKSYEVMHGELGNADSIQSWSNA
>CP035366.1|QAV75021.1|3598605_3599883_+|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTQPAAEAYRNMWLMGMAALAMVIVFTFLLFQKIRTADSAPAMASSK
>CP035366.1|QAV76808.1|3597501_3598287_-|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANVFIPSFVKDNGETKEMIENQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASQASNYVNGHLLVVDGGYLVR
>CP035366.1|QAV75020.1|3595977_3597432_-|FAD-linked-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVNCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>CP035366.1|QAV75019.1|3593790_3594570_-|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAHGNSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFASEFVARHIAEWQRQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDAPFITLEQRTEHGLRCCRIRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAELPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>CP035366.1|QAV75018.1|3592210_3592786_+|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISQIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>CP035366.1|QAV75017.1|3591933_3592194_+|ferredoxin-family-protein
MSVARNLWRAADAPHIVPADSVERQMVQRLINACPVGLFSLTPEGDLRVDYHGCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>CP035366.1|QAV75016.1|3590671_3591943_+|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDCATTFSSLQPGGESWSVLRARFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGGICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLARFKTHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDTALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPVLLQRPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLLWRHLRRHGLWNLAGDVIRSVRCL
>CP035366.1|QAV75015.1|3590228_3590594_+|6-carboxytetrahydropterin-synthase-QueD
MMSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYRGE
>CP035366.1|QAV75014.1|3588113_3589913_-|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVLNQQPAALAATPAPAAEMPGITIISASQTGNARRVAEALRDDLLTAKLNVKLVNAGDYKFKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSVATGVVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVEGKTLPLNEALQWHFELTVNTANIVENYATLTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIASSQEEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY
>CP035366.1|QAV75023.1|3602389_3603061_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>CP035366.1|QAV75024.1|3603215_3603836_+|LemA-family-protein
MKRDLNTLRIFIVIIFIFNLSGCGYNDIQTYDEQVNASWSEVLNQYQRRADLIPNLVASIKGYSSHERDVLEAVTLARSQANRASSDLQQTPGDEQKLQAWQQAQAQVTRTLGQLTIISERYPELKSQELYQNLMVQLEGSENRIAVARGRYIKAIEQYNVTIRKFPAVLTAKVMDYTPKKNYLPDDVAAVSKAPTIDFSQNANAH
>CP035366.1|QAV75025.1|3603849_3604524_+|YgcG-family-protein
MRNFIFLMAFFCSSVFATQIPVPESPKYVNDLTGTLTNSEVNTLTNQIKALTQKNYAQLVVLVVETTGDETIEQYATRVFDSWKPGDKDRDDGVLLLVAWQDHTVRIEIGYGLEGIITDAQSGKIIRNSIIPAFKKGDLAGGLQKGISDIESRLTGNNLATITPTDHPLPFSGWWALLVWAIVLTFISARGYIKTLGVICFAAIVLAFVLPIAGFSGSWGVLAT
>CP035366.1|QAV75026.1|3604757_3605906_+|YgcG-family-protein
MRIFLLLLMLCGFQVFAERLPSVTDLTGTLTTEEQTALTQQLQTLEQQNHFQVAVLVTPTTGGKNIKLAASQRYGVYHWKPVGEKRYGEGILILVVWPEGLASMKIGHGLEEMLPPEQAAQIVRYHMQPEFEKNNLFAGLTGGIESIAQFTHIKANLSPLDALANHLFANPQRSLPCLAWTLLMIVAIVVLWLFASRPRRGIWMISMITPMVWFFSFQDDVIIRRVSVVCFSLLLATTCKQRLAVVFNMCRVFPMMLTPKNKNAKVKKQKKTPQVRESGRNSLFVVMLIIIVGWCLVFASNKDIAFISTIIGLIDHFIGPITIAGIVLLIIVAKFTGNLKLGSGEKSNRKTGNRNAHSRSSSRNSFRGGGGSSGGGGSSVRW
>CP035366.1|QAV76809.1|3605902_3606817_+|YgcG-family-protein
MIVMRLIFILFTLWCLPGLAQQIAVPELRQQVTDITGTLSTSEQQSLTQQLQDITHKTRAQVAVLVVPSTGDDSIEQYATRVFDSWKLGDKQRNDGILLLVAWEDHAVRIEVGYGLEGVVTDLQAAKIIRDILIPAFKSDDLMGGLTLASENIGALLLNGELPEDRGDYYSINPPIPLSLAVIILLAVLSYFIVFTDPSNLPWITLTGAIYGMVFLYVAEPGPWTNLIVACGMLTPFAIVPLVIFWLIVNKKLRAKYKKLSKDRASRKGSSSSSSGGGSSGGGSGGGFSGGGGSSGGGGASGRW
>CP035366.1|QAV75027.1|3606876_3608175_-|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP035366.1|QAV75028.1|3608262_3609900_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>CP035366.1|QAV75029.1|3610127_3610919_-|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATITPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>CP035366.1|QAV75030.1|3610989_3611325_-|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>CP035366.1|QAV75031.1|3611324_3611573_-|MazF-MazE-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW

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Crispr_ID: CP035366_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP035366_5

5292152-5292301

Orphan

Consensus_repeat	Method
CGCGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP035366_5

>merge|CP035366|5|5292152-5292301|CRISPRCasFinder
CGCGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCATGCCGCATCCGACAATAACAGCATTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCA

>CP035366|5|4|5292152-5292301|CRISPRCasFinder
CGCGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	TGCCGCATCCGACAATAACAGCATTGCCTGATGCGACGCTTG
CGCGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCA

Protein	Signature genes	Signature genes Name	Protein_function
CP035366.1\|QAV76510.1\|5287434_5288631_+\|DUF898-domain-containing-protein	unknown	unknown	gnl\|CDD\|226719
CP035366.1\|QAV76509.1\|5286738_5287242_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP035366.1\|QAV76518.1\|5300996_5301302_+\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
CP035366.1\|QAV76507.1\|5285110_5286115_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179587
CP035366.1\|QAV76516.1\|5298090_5299110_-\|NADPH-dependent-aldehyde-reductase-Ahr	unknown	unknown	gnl\|CDD\|176186
CP035366.1\|QAV76517.1\|5299554_5300829_+\|DUF4102-domain-containing-protein	unknown	unknown	gnl\|CDD\|170049
CP035366.1\|QAV76519.1\|5302150_5303395_-\|DNA-cytosine-methyltransferase	unknown	unknown	gnl\|CDD\|223348
CP035366.1\|QAV76506.1\|5283299_5285054_+\|hypothetical-protein	unknown	unknown	unknown
CP035366.1\|QAV76520.1\|5303404_5303668_-\|hypothetical-protein	unknown	unknown	unknown
CP035366.1\|QAV76511.1\|5288685_5291541_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
CP035366.1\|QAV76504.1\|5281986_5282580_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
CP035366.1\|QAV76515.1\|5296458_5297961_-\|DUF853-domain-containing-protein	unknown	unknown	gnl\|CDD\|283518
CP035366.1\|QAV76508.1\|5286276_5286693_+\|ribonuclease-E-inhibitor-RraB	unknown	unknown	gnl\|CDD\|236876
CP035366.1\|QAV76875.1\|5295215_5296298_+\|lipopolysaccharide-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|237900
CP035366.1\|QAV76514.1\|5294115_5295216_+\|lipopolysaccharide-ABC-transporter-permease-LptF	unknown	unknown	gnl\|CDD\|185075
CP035366.1\|QAV76512.1\|5291540_5291984_-\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|235581
CP035366.1\|QAV76505.1\|5282724_5283177_+\|YhcH/YjgK/YiaL-family-protein	unknown	unknown	gnl\|CDD\|225345
CP035366.1\|QAV76503.1\|5281202_5281916_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|183714
CP035366.1\|QAV76876.1\|5301378_5302113_+\|restriction-endonuclease	unknown	unknown	unknown
CP035366.1\|QAV76513.1\|5292337_5293849_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863

Protein	Function_ID	Function_description	E-value
CP035366.1\|QAV76510.1\|5287434_5288631_+\|DUF898-domain-containing-protein	gnl\|CDD\|226719	COG4269, COG4269, Predicted membrane protein [Function unknown].	5.35185e-152
CP035366.1\|QAV76509.1\|5286738_5287242_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.52162e-19
CP035366.1\|QAV76518.1\|5300996_5301302_+\|XRE-family-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.8494e-12
CP035366.1\|QAV76504.1\|5281986_5282580_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	9.63528e-10
CP035366.1\|QAV76516.1\|5298090_5299110_-\|NADPH-dependent-aldehyde-reductase-Ahr	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	5.44918e-169
CP035366.1\|QAV76517.1\|5299554_5300829_+\|DUF4102-domain-containing-protein	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	8.97279e-83
CP035366.1\|QAV76519.1\|5302150_5303395_-\|DNA-cytosine-methyltransferase	gnl\|CDD\|223348	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair].	4.0359e-78
CP035366.1\|QAV76507.1\|5285110_5286115_-\|ornithine-carbamoyltransferase	gnl\|CDD\|179587	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional.	0
CP035366.1\|QAV76511.1\|5288685_5291541_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
CP035366.1\|QAV76515.1\|5296458_5297961_-\|DUF853-domain-containing-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0
CP035366.1\|QAV76508.1\|5286276_5286693_+\|ribonuclease-E-inhibitor-RraB	gnl\|CDD\|236876	PRK11191, PRK11191, ribonuclease E inhibitor RraB.	4.50628e-69
CP035366.1\|QAV76875.1\|5295215_5296298_+\|lipopolysaccharide-ABC-transporter-permease-LptG	gnl\|CDD\|237900	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional.	0
CP035366.1\|QAV76514.1\|5294115_5295216_+\|lipopolysaccharide-ABC-transporter-permease-LptF	gnl\|CDD\|185075	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional.	0
CP035366.1\|QAV76512.1\|5291540_5291984_-\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|235581	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated.	5.53743e-66
CP035366.1\|QAV76505.1\|5282724_5283177_+\|YhcH/YjgK/YiaL-family-protein	gnl\|CDD\|225345	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism].	3.50239e-70
CP035366.1\|QAV76503.1\|5281202_5281916_-\|SDR-family-oxidoreductase	gnl\|CDD\|183714	PRK12742, PRK12742, SDR family oxidoreductase.	2.19644e-150
CP035366.1\|QAV76513.1\|5292337_5293849_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0

>CP035366.1|QAV76512.1|5291540_5291984_-|DNA-polymerase-III-subunit-chi
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK
>CP035366.1|QAV76511.1|5288685_5291541_-|valine--tRNA-ligase
MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVLPADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL
>CP035366.1|QAV76510.1|5287434_5288631_+|DUF898-domain-containing-protein
MAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCKRYLYANMEVNGQRFSYGITGGNVFFSCLVFVFFYFAILMTVSADMPLIGCVLTLSLLVLLIFMAAKGLRYQALMTSLNGVRFSFNCSMKGVWWVTFFLPILMAIGMGTVFFISTKMLHANSSSSVIVSVVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDTAYCIKYAILAFLALLPFLAVAGYIIFDQILNAYDSSVYANDDIENLQQFMEMQRKMIIAQLIYYFGIAVSTSYLTVSLRNHFMSNLSLNDGRIRFRSTLTYHGMLYRMCALVVISGITGGLAYPLLKIWMIDWQAKNTYLLGDLDDLPLINKEEQPDKGFLASISRGIMPSLPFL
>CP035366.1|QAV76509.1|5286738_5287242_-|GNAT-family-N-acetyltransferase
MNNIAPQSPVMRRLTLQDNPAIARVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEYEGEVVGGGGIAPLAGSESDICELQKMYFLPAIRGKGLAKKLALKAMEEAREMGFKRCYLETTAFLKEAIGLYEHLGFQHIDYALGCTGHVDCEVRMLREL
>CP035366.1|QAV76508.1|5286276_5286693_+|ribonuclease-E-inhibitor-RraB
MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGVRH
>CP035366.1|QAV76507.1|5285110_5286115_-|ornithine-carbamoyltransferase
MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKPFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLRDYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK
>CP035366.1|QAV76506.1|5283299_5285054_+|hypothetical-protein
MSKISDLNYSQHITLADNFKQKSEVLNTWRVGMNNFARNAGGQDNTRNILNPKTFLEFLVKIFTLGYVDFSKRSNEAGRNMMAHIESSSYIKNNDGSEIMKFVMNNPEGERADSPKVIIEISLSTITTMGTRQGHTAIIFPQPDGSTNRYERKSFERKDESSLHLITNKVLACYQREANKEIARLLNNHQKLNNLQKLNNLQKLNNIQKLNNIQELNNSQELNNSQELNNSQELNNSQDLKNSQVSCKGSVDFTITDLLEKSLNNALLAIRNEHLLLMPHVCSESISYLLGENGILEEIDKLYELNDHGIDNDKEGNNEINDIMINLSHILIESLDDAKVNLTPVIHSMLMTFLELPYNNDVKILEWCFNKSMQYFDDSAKIEHACSVINHINFRRDQSKVAETLFFNLDKEPYKNSPELQELIWKKLVVYVNDFNLSNREKTYLIQRIFNNVESLFNKVPVSILVNDIFMNDFFMKNTEMINWYFPRLLKSYEDEKIYFDKLGYNFNNKESNEEIMKNQPKDVIEEKLNNELKLRFRMMQTILKSEVNVSPFIDQQRLNTLNPPENLRIAIEKFGWKKKTITA
>CP035366.1|QAV76505.1|5282724_5283177_+|YhcH/YjgK/YiaL-family-protein
MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPYEARRAEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKMLMA
>CP035366.1|QAV76504.1|5281986_5282580_+|TetR/AcrR-family-transcriptional-regulator
MVTKKQSRVPGRPRRFAPEQAVSAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGSKAGLFSRVLNEYVGTEAIPLVDILRDDRPVGECLAEVLKEAARRYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETAIYDYIARLHPQSAQCVTDFMSTVMSGLSAKAREGHSLEQLCATAALAGEAIKTILKE
>CP035366.1|QAV76503.1|5281202_5281916_-|SDR-family-oxidoreductase
MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVFTDSADRDAVIDVVRKSGALDILVVNAGIGVFGDALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSFMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA
>CP035366.1|QAV76513.1|5292337_5293849_-|leucyl-aminopeptidase
MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE
>CP035366.1|QAV76514.1|5294115_5295216_+|lipopolysaccharide-ABC-transporter-permease-LptF
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV
>CP035366.1|QAV76875.1|5295215_5296298_+|lipopolysaccharide-ABC-transporter-permease-LptG
MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS
>CP035366.1|QAV76515.1|5296458_5297961_-|DUF853-domain-containing-protein
MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVKGDLTGIAQAGTASEKLLARLKNIDVNDWQPHANPVVVWDIFGEKGHSVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASVGAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDEVDRESAYEMLQKGFQASTEQQNNPPAKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRRR
>CP035366.1|QAV76516.1|5298090_5299110_-|NADPH-dependent-aldehyde-reductase-Ahr
MSMIKSYAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALSGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLPVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIKHVRDGKARYRVVLKADF
>CP035366.1|QAV76517.1|5299554_5300829_+|DUF4102-domain-containing-protein
MKLNARQVETAKPKDKSYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAEARTRRDEAKKLLAQGIDPKAVQKEAQAENAGAYNFETIAREWHASNKRWSEDHRARVLRYLELYIFPYIGLSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTAKTRHYPALPSHRFPEFLARLAAYRGRMMTKIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHLVPLSRQAIGLLEQLKQISGDKTLLFPGDHDATKVMSENTVNNALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLYSNREKHISAFEFANKLNKNSLD
>CP035366.1|QAV76518.1|5300996_5301302_+|XRE-family-transcriptional-regulator
MLPIRLKKARLNAGLTQEQLGILVGIDECSASARMNQYEKGKHMPDFSLTKKIADLLNVPVSYFYTPEDDLAEIILLINKLDKKQRLILLKNLSDGFISHE
>CP035366.1|QAV76876.1|5301378_5302113_+|restriction-endonuclease
MSETMSINPFMTPFIFDYHSLNDFDELVEAIIAKHLMTGHDTGFGKLIDEKILPRVFGAYKLDKSYRAANEPFIHPCFDEIDHVIQRDDGRIELLSLKAGKWTIQLTMAVQLNKAFHEIINNYPGVADNIVVGVFYGNSHGLTDKYRILRGINTGANHNVIDIRDKVHVYAGKEFWSWLNNGEAETQHWVLEGIERAVKEADIKEKNKDLIEKFKEHVAKKYNEQVLNADGTAQWHKLLEMINE
>CP035366.1|QAV76519.1|5302150_5303395_-|DNA-cytosine-methyltransferase
MSSKKFISLFSGAMGLDLGLEEAGFELVACVEQDKAALKTIKTNKPNLAVFEGSIVDCTGSELLALAGVNDKEEIDLVAGGPPCQAFSVFGNRLGLEDARGQLIFEYVRMIKELNPKVFVMENVRGLLSMSIVPASKKKELSGTIAASAFEKGSLIKRVANEFNKLGYHVDCFVVNAANYGAPQIRERVILIGNRFGMIANFASPLFSNRVEDNLPPFKTLGDVIGPESGFVDKYPEVMNFSPRKLKYLSMVPPGGNWRSMPEEMQKESMGKSWYLKGGRSAYWRKLSFQFPSPTVVTMPNHAGTSMCHPTELRAISVGEAAAIQEFPDYWKFEGTTTEKFRQIGNAVPVRLGKVAGEAAMELLHRIQENKVADLVTPDYIETHIRPHIRTRSFFKNGQAYSGDVSYYDLEEEV
>CP035366.1|QAV76520.1|5303404_5303668_-|hypothetical-protein
MHGFACVSLPHFLQTAPFPAQSERVSTTALKPPCKAGGRGGESTARQYLLIYIHRILAKQILLRSLKLELRISVNPLQYPSIWLLSM

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP035366_2	2.2\|2911143\|26\|CP035366\|PILER-CR	2911143-2911168	26	CP035366.1	1574499-1574524	0	1.0

1. spacer 2.2|2911143|26|CP035366|PILER-CR matches to position: 1574499-1574524, mismatch: 0, identity: 1.0

atttacctctttcaggtaaactttat	CRISPR spacer
atttacctctttcaggtaaactttat	Protospacer
**************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP035366_2	2.1\|2911096\|25\|CP035366\|PILER-CR	2911096-2911120	25	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	44572-44596	0	1.0
CP035366_2	2.2\|2911143\|26\|CP035366\|PILER-CR	2911143-2911168	26	NC_049946	Escherichia virus Lambda_4A7 genome assembly, chromosome: 1	37604-37629	0	1.0
CP035366_2	2.2\|2911143\|26\|CP035366\|PILER-CR	2911143-2911168	26	LR595861	Escherichia virus Lambda_4C10 genome assembly, chromosome: 1	37887-37912	0	1.0
CP035366_2	2.2\|2911143\|26\|CP035366\|PILER-CR	2911143-2911168	26	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	44524-44549	1	0.962
CP035366_3	3.3\|3576271\|32\|CP035366\|CRISPRCasFinder	3576271-3576302	32	MK047640	Phage NV18, complete genome	15645-15676	1	0.969
CP035366_3	3.6\|3576272\|31\|CP035366\|CRT,PILER-CR	3576272-3576302	31	MK047640	Phage NV18, complete genome	15646-15676	1	0.968
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	101196-101230	2	0.943
CP035366_2	2.1\|2911096\|25\|CP035366\|PILER-CR	2911096-2911120	25	NC_049946	Escherichia virus Lambda_4A7 genome assembly, chromosome: 1	37652-37676	2	0.92
CP035366_2	2.1\|2911096\|25\|CP035366\|PILER-CR	2911096-2911120	25	LR595861	Escherichia virus Lambda_4C10 genome assembly, chromosome: 1	37935-37959	2	0.92
CP035366_3	3.3\|3576271\|32\|CP035366\|CRISPRCasFinder	3576271-3576302	32	MF417881	Uncultured Caudovirales phage clone 7AX_3, partial genome	2718-2749	2	0.938
CP035366_3	3.6\|3576272\|31\|CP035366\|CRT,PILER-CR	3576272-3576302	31	MF417881	Uncultured Caudovirales phage clone 7AX_3, partial genome	2718-2748	2	0.935
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	165464-165498	3	0.914
CP035366_2	2.2\|2911143\|26\|CP035366\|PILER-CR	2911143-2911168	26	NZ_CP015341	Lactobacillus brevis strain 100D8 plasmid unnamed3, complete sequence	35661-35686	4	0.846
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14239-14273	5	0.857
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56080-56114	5	0.857
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	6804-6838	6	0.829
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	208981-209015	6	0.829
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	219475-219509	6	0.829
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	210309-210343	6	0.829
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	191264-191298	6	0.829
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	30177-30211	6	0.829
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	170-204	6	0.829
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	88-122	6	0.829
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	87137-87171	7	0.8
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	138033-138067	7	0.8
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	43-77	7	0.8
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3372-3406	7	0.8
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	208887-208921	7	0.8
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	42-76	7	0.8
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3371-3405	7	0.8
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	219381-219415	7	0.8
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	42-76	7	0.8
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3371-3405	7	0.8
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	210215-210249	7	0.8
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	42-76	7	0.8
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3371-3405	7	0.8
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	191170-191204	7	0.8
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27246-27280	7	0.8
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	18350-18384	7	0.8
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	15018-15052	7	0.8
CP035366_3	3.4\|3576150\|31\|CP035366\|CRT	3576150-3576180	31	NC_015512	Haliscomenobacter hydrossis DSM 1100 plasmid pHALHY02, complete sequence	90200-90230	7	0.774
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	61916-61950	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4114-4148	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229148-229182	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229249-229283	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229350-229384	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229451-229485	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	203852-203886	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	204038-204072	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	204131-204165	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4113-4147	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239642-239676	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239743-239777	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239844-239878	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239945-239979	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	214346-214380	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	214532-214566	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	214625-214659	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4113-4147	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230554-230588	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230655-230689	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230756-230790	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230857-230891	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	205180-205214	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	205366-205400	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	205459-205493	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4113-4147	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211524-211558	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211625-211659	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211726-211760	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211827-211861	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	186135-186169	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	186321-186355	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	186414-186448	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	14272-14306	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	6744-6778	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7392-7426	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	83590-83624	8	0.771
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84216-84250	8	0.771
CP035366_3	3.1\|3576149\|32\|CP035366\|CRISPRCasFinder	3576149-3576180	32	NC_015512	Haliscomenobacter hydrossis DSM 1100 plasmid pHALHY02, complete sequence	90200-90231	8	0.75
CP035366_3	3.6\|3576272\|31\|CP035366\|CRT,PILER-CR	3576272-3576302	31	NC_011370	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG203, complete sequence	102901-102931	8	0.742
CP035366_3	3.6\|3576272\|31\|CP035366\|CRT,PILER-CR	3576272-3576302	31	NZ_CP032697	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525a, complete sequence	313484-313514	8	0.742
CP035366_3	3.6\|3576272\|31\|CP035366\|CRT,PILER-CR	3576272-3576302	31	NZ_CP049249	Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence	984473-984503	8	0.742
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	386558-386592	9	0.743
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4013-4047	9	0.743
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4012-4046	9	0.743
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4012-4046	9	0.743
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4012-4046	9	0.743
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	13988-14022	9	0.743
CP035366_1	1.1\|72853\|35\|CP035366\|CRISPRCasFinder	72853-72887	35	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	41415-41449	9	0.743
CP035366_3	3.3\|3576271\|32\|CP035366\|CRISPRCasFinder	3576271-3576302	32	NC_011370	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG203, complete sequence	102900-102931	9	0.719
CP035366_3	3.3\|3576271\|32\|CP035366\|CRISPRCasFinder	3576271-3576302	32	NZ_CP032697	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525a, complete sequence	313483-313514	9	0.719
CP035366_3	3.3\|3576271\|32\|CP035366\|CRISPRCasFinder	3576271-3576302	32	NZ_CP049249	Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence	984472-984503	9	0.719

1. spacer 2.1|2911096|25|CP035366|PILER-CR matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcctttacctgatttgggtaaac	CRISPR spacer
gtgcctttacctgatttgggtaaac	Protospacer
*************************

2. spacer 2.2|2911143|26|CP035366|PILER-CR matches to NC_049946 (Escherichia virus Lambda_4A7 genome assembly, chromosome: 1) position: , mismatch: 0, identity: 1.0

atttacctctttcaggtaaactttat	CRISPR spacer
atttacctctttcaggtaaactttat	Protospacer
**************************

3. spacer 2.2|2911143|26|CP035366|PILER-CR matches to LR595861 (Escherichia virus Lambda_4C10 genome assembly, chromosome: 1) position: , mismatch: 0, identity: 1.0

atttacctctttcaggtaaactttat	CRISPR spacer
atttacctctttcaggtaaactttat	Protospacer
**************************

4. spacer 2.2|2911143|26|CP035366|PILER-CR matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 1, identity: 0.962

atttacctctttcaggtaaactttat	CRISPR spacer
atttacctctttaaggtaaactttat	Protospacer
************ *************

5. spacer 3.3|3576271|32|CP035366|CRISPRCasFinder matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 1, identity: 0.969

tttggtgacagtttttgtcactgttttggtga	CRISPR spacer
tttggtgacactttttgtcactgttttggtga	Protospacer
********** *********************

6. spacer 3.6|3576272|31|CP035366|CRT,PILER-CR matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 1, identity: 0.968

ttggtgacagtttttgtcactgttttggtga	CRISPR spacer
ttggtgacactttttgtcactgttttggtga	Protospacer
********* *********************

7. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 2, identity: 0.943

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcgctgaa	Protospacer
 ***********.**********************

8. spacer 2.1|2911096|25|CP035366|PILER-CR matches to NC_049946 (Escherichia virus Lambda_4A7 genome assembly, chromosome: 1) position: , mismatch: 2, identity: 0.92

gtgcctttacctgatttgggtaaac	CRISPR spacer
acgcctttacctgatttgggtaaac	Protospacer
..***********************

9. spacer 2.1|2911096|25|CP035366|PILER-CR matches to LR595861 (Escherichia virus Lambda_4C10 genome assembly, chromosome: 1) position: , mismatch: 2, identity: 0.92

gtgcctttacctgatttgggtaaac	CRISPR spacer
acgcctttacctgatttgggtaaac	Protospacer
..***********************

10. spacer 3.3|3576271|32|CP035366|CRISPRCasFinder matches to MF417881 (Uncultured Caudovirales phage clone 7AX_3, partial genome) position: , mismatch: 2, identity: 0.938

tttggtgacagtttttgtcactgttttggtga	CRISPR spacer
tttggtgacactttttgtcactgatttggtga	Protospacer
********** ************ ********

11. spacer 3.6|3576272|31|CP035366|CRT,PILER-CR matches to MF417881 (Uncultured Caudovirales phage clone 7AX_3, partial genome) position: , mismatch: 2, identity: 0.935

ttggtgacagtttttgtcactgttttggtga	CRISPR spacer
ttggtgacactttttgtcactgatttggtga	Protospacer
********* ************ ********

12. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 3, identity: 0.914

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
agataagacgcgtcagcgtcgcatcaggcgttaca	Protospacer
******************************.*. *

13. spacer 2.2|2911143|26|CP035366|PILER-CR matches to NZ_CP015341 (Lactobacillus brevis strain 100D8 plasmid unnamed3, complete sequence) position: , mismatch: 4, identity: 0.846

atttacctctttcaggtaaactttat	CRISPR spacer
aggtatctcattcaggtaaactttat	Protospacer
*  **.*** ****************

14. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 5, identity: 0.857

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgacagcggcgcatcaggcgctggt	Protospacer
 *********** ***** **************.

15. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 5, identity: 0.857

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
cgctaagacgcgccagcgtcgcatcaggcgttgag	Protospacer
 * *********.*****************.***.

16. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
agataagacgcgtcagcgtcgcatctggcataaac	Protospacer
************************* ***.. .*

17. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatctga	Protospacer
 ****************************... .*

18. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatctga	Protospacer
 ****************************... .*

19. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatctga	Protospacer
 ****************************... .*

20. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatctga	Protospacer
 ****************************... .*

21. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatcaga	Protospacer
 ****************************.....*

22. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcttcaat	Protospacer
 **************************** ...*

23. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatcggc	Protospacer
 ****************************...*.

24. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcggcagcgtcgcatcaggcatcgtg	Protospacer
 *********** ****************...* .

25. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcattagcgtcgcatcaggcagcgca	Protospacer
 **********.*.***************. .* *

26. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
 ****************************.....

27. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcacctgc	Protospacer
 ***********.****************.*. .

28. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataaaacgcgtcagcgtcgcatcaggcatcggc	Protospacer
 *****.**********************...*.

29. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
 ****************************.....

30. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcacctgc	Protospacer
 ***********.****************.*. .

31. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataaaacgcgtcagcgtcgcatcaggcatcggc	Protospacer
 *****.**********************...*.

32. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
 ****************************.....

33. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcacctgc	Protospacer
 ***********.****************.*. .

34. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataaaacgcgtcagcgtcgcatcaggcatcggc	Protospacer
 *****.**********************...*.

35. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
 ****************************.....

36. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcacctgc	Protospacer
 ***********.****************.*. .

37. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataaaacgcgtcagcgtcgcatcaggcatcggc	Protospacer
 *****.**********************...*.

38. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtctgcgtcgcatctggcaccggt	Protospacer
 ************* ********** ***.*.*.

39. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
 ****************************.....

40. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcacctgg	Protospacer
 ***********.****************.*. ..

41. spacer 3.4|3576150|31|CP035366|CRT matches to NC_015512 (Haliscomenobacter hydrossis DSM 1100 plasmid pHALHY02, complete sequence) position: , mismatch: 7, identity: 0.774

gcggcacgctggattgaacaaat---ccctgggc	CRISPR spacer
gcggcacgatgggttgaacaaatggactttg---	Protospacer
******** ***.**********   *..**

42. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
agataagacgcgccagcgtcgcatctggcatctgc	Protospacer
************.************ ***... .

43. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
 ***********.****************... .

44. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

45. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

46. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

47. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

48. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcgacgcatcaggcatcggc	Protospacer
 ****** ********** **********...*.

49. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*.

50. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*.

51. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
 ***********.****************... .

52. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

53. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

54. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

55. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

56. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcgacgcatcaggcatcggc	Protospacer
 ****** ********** **********...*.

57. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*.

58. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*.

59. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
 ***********.****************... .

60. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

61. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

62. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

63. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

64. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcgacgcatcaggcatcggc	Protospacer
 ****** ********** **********...*.

65. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*.

66. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*.

67. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
 ***********.****************... .

68. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

69. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

70. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

71. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... .

72. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcgacgcatcaggcatcggc	Protospacer
 ****** ********** **********...*.

73. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*.

74. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*.

75. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagatgcgccagcgtcgcatcaggtaattca	Protospacer
 *******.***.***************.. *  *

76. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgtatcaggcatctgc	Protospacer
 ********************.*******... .

77. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcatccgg	Protospacer
 ***********.****************... ..

78. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgtatcaggcatctgc	Protospacer
 ********************.*******... .

79. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcatccgg	Protospacer
 ***********.****************... ..

80. spacer 3.1|3576149|32|CP035366|CRISPRCasFinder matches to NC_015512 (Haliscomenobacter hydrossis DSM 1100 plasmid pHALHY02, complete sequence) position: , mismatch: 8, identity: 0.75

agcggcacgctggattgaacaaat---ccctgggc	CRISPR spacer
tgcggcacgatgggttgaacaaatggactttg---	Protospacer
 ******** ***.**********   *..**

81. spacer 3.6|3576272|31|CP035366|CRT,PILER-CR matches to NC_011370 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG203, complete sequence) position: , mismatch: 8, identity: 0.742

ttggtgacagtttttgtcactgttttggtga	CRISPR spacer
cagtcaagagtctttggcactgttttggtga	Protospacer
. * ..* ***.**** **************

82. spacer 3.6|3576272|31|CP035366|CRT,PILER-CR matches to NZ_CP032697 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525a, complete sequence) position: , mismatch: 8, identity: 0.742

ttggtgacagtttttgtcactgttttggtga	CRISPR spacer
cagtcaagagtctttggcactgttttggtga	Protospacer
. * ..* ***.**** **************

83. spacer 3.6|3576272|31|CP035366|CRT,PILER-CR matches to NZ_CP049249 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.742

ttggtgacagtttttgtcactgttttggtga	CRISPR spacer
cagtcaagagtttttggcaccgttttggtga	Protospacer
. * ..* ******** ***.**********

84. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.743

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcatcgcatcaggcatcagc	Protospacer
 ************.***.***********.....

85. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.743

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgctagcgtcgcatcaggcatctgc	Protospacer
 ***********..***************... .

86. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.743

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgctagcgtcgcatcaggcatctgc	Protospacer
 ***********..***************... .

87. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.743

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgctagcgtcgcatcaggcatctgc	Protospacer
 ***********..***************... .

88. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.743

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgctagcgtcgcatcaggcatctgc	Protospacer
 ***********..***************... .

89. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 9, identity: 0.743

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
cgataagacgcgccagcgtcgcatcgggcatccgt	Protospacer
 ***********.************.***... .

90. spacer 1.1|72853|35|CP035366|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 9, identity: 0.743

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcagacatcagc	Protospacer
 ***********.**************.*.....

91. spacer 3.3|3576271|32|CP035366|CRISPRCasFinder matches to NC_011370 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG203, complete sequence) position: , mismatch: 9, identity: 0.719

tttggtgacagtttttgtcactgttttggtga	CRISPR spacer
acagtcaagagtctttggcactgttttggtga	Protospacer
 . * ..* ***.**** **************

92. spacer 3.3|3576271|32|CP035366|CRISPRCasFinder matches to NZ_CP032697 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525a, complete sequence) position: , mismatch: 9, identity: 0.719

tttggtgacagtttttgtcactgttttggtga	CRISPR spacer
gcagtcaagagtctttggcactgttttggtga	Protospacer
 . * ..* ***.**** **************

93. spacer 3.3|3576271|32|CP035366|CRISPRCasFinder matches to NZ_CP049249 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

tttggtgacagtttttgtcactgttttggtga	CRISPR spacer
gcagtcaagagtttttggcaccgttttggtga	Protospacer
 . * ..* ******** ***.**********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

255993 : 334206

Shigella_phage(52.73%)

protease,lysis,capsid,holin,head,tail,terminase,portal,plate,transposase,integrase

attL 297085:297131|attR 336529:336575

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAV71921.1\|255993_257325_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
QAV71922.1\|257327_257852_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
QAV71923.1\|259153_260236_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
QAV71924.1\|260199_262050_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
QAV71925.1\|262053_262467_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
QAV71926.1\|262557_263949_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
QAV71927.1\|263999_264224_-	hypothetical protein	NA	NA	NA	NA
QAV71928.1\|264258_264759_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
QAV71929.1\|265455_265974_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
QAV71930.1\|266183_268325_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.4e-25	25.0
QAV71931.1\|268400_272624_+	RHS repeat protein	A0A2H4JHK7	uncultured_Caudovirales_phage	2.4e-21	42.3
QAV71932.1\|272825_273089_+	dCTP deaminase	NA	NA	NA	NA
QAV71933.1\|273003_273189_-	hypothetical protein	NA	NA	NA	NA
QAV71934.1\|273269_274442_+\|transposase	ISAs1-like element ISEc26 family transposase	NA	NA	NA	NA
QAV71935.1\|274559_275330_-	2-oxoglutaramate amidase	NA	NA	NA	NA
QAV71936.1\|275483_275957_+	C-lysozyme inhibitor	NA	NA	NA	NA
QAV71937.1\|275999_278444_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
QAV71938.1\|278683_279262_+	D-sedoheptulose 7-phosphate isomerase	A0A067XQR2	Caulobacter_phage	1.1e-14	32.0
QAV71939.1\|279366_280134_+	class II glutamine amidotransferase	NA	NA	NA	NA
QAV71940.1\|280104_280845_-	murein L,D-transpeptidase	NA	NA	NA	NA
QAV71941.1\|281000_281261_-	type II toxin-antitoxin system mRNA interferase toxin YafQ	NA	NA	NA	NA
QAV71942.1\|281279_281540_-	type II toxin-antitoxin system antitoxin DinJ	NA	NA	NA	NA
QAV71943.1\|281725_282499_+	peptidoglycan endopeptidase	A0A1V0DZX6	Clostridioides_phage	1.2e-19	37.7
QAV71944.1\|283316_285056_-	flagellar type III secretion system protein FlhA	NA	NA	NA	NA
QAV71945.1\|285015_285786_+	putative lateral flagellar export/assembly protein LafU	NA	NA	NA	NA
QAV71946.1\|285856_286912_+	DNA polymerase IV	NA	NA	NA	NA
QAV71947.1\|286963_287257_+	type I toxin-antitoxin system antitoxin YafN	NA	NA	NA	NA
QAV71948.1\|287259_287658_+	type II toxin-antitoxin system YafO family toxin	NA	NA	NA	NA
QAV71949.1\|287667_288120_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
QAV71950.1\|288426_288693_+	hypothetical protein	NA	NA	NA	NA
QAV76643.1\|288625_289162_+	peptide chain release factor H	NA	NA	NA	NA
QAV71951.1\|289218_290676_-	cytosol nonspecific dipeptidase	NA	NA	NA	NA
QAV71952.1\|290936_291395_+	xanthine phosphoribosyltransferase	NA	NA	NA	NA
QAV71953.1\|291486_292731_+	esterase FrsA	NA	NA	NA	NA
QAV71954.1\|292788_293190_+	sigma factor-binding protein Crl	NA	NA	NA	NA
QAV71955.1\|293228_294284_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	7.7e-118	60.9
QAV71956.1\|294571_295675_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
QAV71957.1\|295686_296940_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	3.4e-96	47.2
297085:297131	attL	NA	NA	NA	NA
QAV71958.1\|297144_298308_-\|integrase	integrase	U5P434	Shigella_phage	2.4e-229	100.0
QAV71959.1\|298184_298619_-	DNA-binding protein	U5P4J3	Shigella_phage	1.0e-76	98.6
QAV71960.1\|298534_298840_-	hypothetical protein	U5P0J0	Shigella_phage	6.8e-51	100.0
QAV71961.1\|298839_299202_-	hypothetical protein	U5P092	Shigella_phage	2.1e-67	100.0
QAV71962.1\|299192_299729_-	5'-deoxynucleotidase	S5MW55	Escherichia_phage	8.2e-100	98.9
QAV71963.1\|299784_300006_-	hypothetical protein	S5FNS4	Shigella_phage	2.4e-37	95.9
QAV71964.1\|300242_300488_+	hypothetical protein	NA	NA	NA	NA
QAV71965.1\|300405_300702_-	hypothetical protein	Q8SBF7	Shigella_phage	1.2e-52	100.0
QAV71966.1\|300979_301672_-	helix-turn-helix transcriptional regulator	S5FUZ3	Shigella_phage	1.0e-126	100.0
QAV71967.1\|301769_302030_+	XRE family transcriptional regulator	S5FKP1	Shigella_phage	7.1e-41	100.0
QAV71968.1\|302022_302574_+	protein YmfL	S5FXP0	Shigella_phage	3.4e-101	99.5
QAV71969.1\|302749_302929_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	7.8e-15	68.5
QAV71970.1\|302918_303860_+	helix-turn-helix domain-containing protein	S5FM81	Shigella_phage	3.3e-144	99.7
QAV71971.1\|303856_304351_+	PerC family transcriptional regulator	A0A0P0ZCF0	Stx2-converting_phage	1.6e-86	98.1
QAV71972.1\|304350_305004_+	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	2.1e-126	99.1
QAV71973.1\|305000_305327_+	LexA family transcriptional regulator	A0A291AWY9	Escherichia_phage	3.9e-52	97.2
QAV71974.1\|305323_305713_+	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	7.1e-69	100.0
QAV71975.1\|305732_306542_+	KilA-N domain-containing protein	A0A291AWU7	Escherichia_phage	1.8e-151	100.0
QAV71976.1\|306549_307539_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.5e-195	100.0
QAV71977.1\|307552_308305_+	antitermination protein	Q8SBE4	Shigella_phage	1.7e-135	98.0
QAV76644.1\|308519_309059_+	hypothetical protein	NA	NA	NA	NA
QAV71978.1\|309202_309436_+	hypothetical protein	NA	NA	NA	NA
QAV76645.1\|309714_310008_+	site-specific DNA-methyltransferase	Q8SBE2	Shigella_phage	1.5e-42	90.7
QAV71979.1\|310144_310480_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	2.0e-59	99.1
QAV71980.1\|310483_310960_+	lysozyme	K7PKV2	Enterobacteria_phage	3.0e-85	96.2
QAV71981.1\|311176_311359_+\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.9e-17	98.3
QAV71982.1\|311449_311743_-	increased serum survival lipoprotein Iss	K7PL54	Enterobacteria_phage	2.0e-44	91.8
QAV71983.1\|311835_311976_+	Rz1 lytic protein	U5P461	Shigella_phage	3.5e-10	81.0
QAV71984.1\|312441_313655_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
QAV71985.1\|314057_314552_+\|terminase	phage terminase small subunit P27 family	U5P067	Shigella_phage	3.9e-88	99.4
QAV76646.1\|314785_316282_+\|terminase	terminase large subunit	A0A1C9IIA1	Salmonella_phage	5.3e-290	98.8
QAV71986.1\|316429_317656_+\|portal	phage portal protein	Q8SBI0	Shigella_phage	4.1e-240	98.8
QAV71987.1\|317648_318251_+\|head,protease	HK97 family phage prohead protease	Q8SBH9	Shigella_phage	6.8e-111	100.0
QAV71988.1\|318261_319491_+\|capsid	phage major capsid protein	Q8SBH8	Shigella_phage	7.6e-226	99.3
QAV71989.1\|319569_319893_+\|head,tail	phage gp6-like head-tail connector protein	Q8SBH7	Shigella_phage	3.5e-53	100.0
QAV71990.1\|319889_320300_+\|head,tail	head-tail adaptor protein	M1FJ87	Enterobacteria_phage	5.7e-69	93.4
QAV71991.1\|320274_320781_+	hypothetical protein	Q8SBH5	Shigella_phage	2.9e-83	92.9
QAV71992.1\|320777_321338_+	hypothetical protein	M1FQV7	Enterobacteria_phage	6.8e-105	99.5
QAV71993.1\|321346_321517_+	DUF2635 domain-containing protein	Q8SBH3	Shigella_phage	9.3e-26	100.0
QAV71994.1\|321500_322997_+\|tail	phage tail protein	M1FN90	Enterobacteria_phage	1.1e-271	98.8
QAV71995.1\|322996_323353_+\|tail	phage tail protein	U5P076	Shigella_phage	1.2e-62	99.2
QAV71996.1\|323352_323622_+\|tail	phage tail assembly protein	M1FPE4	Enterobacteria_phage	3.5e-43	100.0
QAV71997.1\|323588_323777_+	hypothetical protein	NA	NA	NA	NA
QAV71998.1\|323763_325599_+\|tail	phage tail tape measure protein	Q8SBG9	Shigella_phage	1.5e-307	99.7
QAV71999.1\|325659_326988_+	DNA circularization protein	Q8SBG8	Shigella_phage	2.5e-246	98.9
QAV72000.1\|326984_328064_+\|plate	baseplate protein	U5P0H6	Shigella_phage	9.1e-207	99.7
QAV72001.1\|328063_328612_+\|plate	phage baseplate assembly protein V	U5P081	Shigella_phage	3.6e-95	97.8
QAV76647.1\|328611_329037_+\|tail	phage tail protein	U5P0R9	Shigella_phage	2.3e-81	100.0
QAV72002.1\|329023_330082_+\|plate	baseplate J/gp47 family protein	Q8SBG4	Shigella_phage	1.6e-200	98.9
QAV72003.1\|330072_330657_+	DUF2313 domain-containing protein	O22003	Shigella_phage	7.8e-112	98.5
QAV72004.1\|332817_333372_+	site-specific DNA recombinase	A0A0F7LA37	Escherichia_phage	2.8e-87	87.8
QAV72005.1\|333432_334206_-	hypothetical protein	G9IA57	Pseudomonas_phage	2.4e-36	38.5
336529:336575	attR	NA	NA	NA	NA

DBSCAN-SWA_2

916849 : 954015

Enterobacteria_phage(51.22%)

protease,lysis,holin,tail,terminase,portal,integrase

attL 906291:906305|attR 938580:938594

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
906291:906305	attL	NA	NA	NA	NA
QAV72483.1\|916849_917731_-\|integrase	integrase	K7P6P6	Enterobacteria_phage	7.2e-162	99.7
QAV72484.1\|917893_918112_-	excisionase	Q77WA4	Escherichia_phage	3.7e-35	100.0
QAV72485.1\|918151_918319_-	hypothetical protein	A0A0K2FJ46	Enterobacteria_phage	1.3e-27	98.2
QAV72486.1\|918251_918437_+	hypothetical protein	NA	NA	NA	NA
QAV72487.1\|918561_919164_+	hypothetical protein	NA	NA	NA	NA
QAV72488.1\|919374_919596_-	TraR/DksA family transcriptional regulator	A0A0N7C211	Escherichia_phage	6.4e-35	98.6
QAV72489.1\|919694_919976_-	hypothetical protein	A0A0P0ZE02	Stx2-converting_phage	1.6e-46	97.8
QAV72490.1\|919986_920178_-	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	1.1e-25	96.8
QAV76666.1\|920150_920333_-	DUF1317 family protein	A0A0P0ZAS9	Stx2-converting_phage	4.1e-27	95.0
QAV72491.1\|920329_921010_-	exonuclease	A0A0P0ZCD4	Stx2-converting_phage	3.5e-132	99.6
QAV72492.1\|921707_921890_+	NinE family protein	Q8H9Z6	Enterobacteria_phage	4.8e-28	96.7
QAV72493.1\|921886_922057_+	protein ninF	Q716C4	Shigella_phage	7.9e-25	96.4
QAV76665.1\|922049_922670_+	recombination protein NinG	Q716C3	Shigella_phage	1.6e-94	96.1
QAV72494.1\|922666_923332_+	serine/threonine protein phosphatase	Q5TJL8	Enterobacteria_phage	9.4e-130	99.1
QAV72495.1\|923543_924503_-	lipid A deacylase LpxR family protein	NA	NA	NA	NA
QAV72496.1\|924840_924963_+	YlcG family protein	NA	NA	NA	NA
QAV72497.1\|924977_925667_+	antitermination protein	I6PDF8	Cronobacter_phage	1.5e-58	48.1
QAV72498.1\|925850_926594_+	hypothetical protein	NA	NA	NA	NA
QAV72499.1\|926679_926838_+	DUF3927 domain-containing protein	NA	NA	NA	NA
QAV72500.1\|926918_927317_-	hypothetical protein	H6WZJ8	Escherichia_phage	6.9e-11	83.3
QAV72501.1\|927459_927675_+\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	4.5e-33	98.6
QAV72502.1\|927674_928172_+	lysozyme	A0A1B5FP97	Escherichia_phage	7.1e-90	98.2
QAV72503.1\|928168_928636_+\|lysis	lysis protein	A0A291AWW3	Escherichia_phage	9.4e-76	97.4
QAV72504.1\|928623_928776_+	hypothetical protein	K7PKL2	Enterobacteria_phage	8.9e-20	96.0
QAV76667.1\|929182_929461_+	hypothetical protein	NA	NA	NA	NA
QAV72505.1\|929940_932043_+\|terminase	phage terminase large subunit family protein	A0A291AWY5	Escherichia_phage	0.0e+00	96.7
QAV72506.1\|932039_932252_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
QAV72507.1\|932179_933304_+\|portal	phage portal protein	K7PJP3	Enterobacteria_phage	5.4e-194	99.4
QAV72508.1\|933425_933761_+\|portal	phage portal protein	A5LH29	Enterobacteria_phage	9.1e-57	99.1
QAV72509.1\|933705_935733_+\|protease	Clp protease ClpP	K7PGT6	Enterobacteria_phage	0.0e+00	99.2
QAV72510.1\|935819_936143_+	DUF2190 family protein	A0A291AWX2	Escherichia_phage	8.5e-52	100.0
QAV72511.1\|936135_936411_+	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	2.3e-45	100.0
QAV72512.1\|936422_937001_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	6.1e-101	99.0
QAV72513.1\|936997_937399_+\|tail	phage tail protein	A5LH34	Enterobacteria_phage	2.0e-71	98.5
QAV72514.1\|937409_938153_+\|tail	phage tail protein	A5LH35	Enterobacteria_phage	9.5e-131	98.0
QAV76668.1\|938213_938600_+\|tail	phage minor tail protein G	A0A291AWW5	Escherichia_phage	1.6e-65	100.0
938580:938594	attR	NA	NA	NA	NA
QAV72515.1\|938608_938938_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
QAV72516.1\|938909_941975_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	98.9
QAV72517.1\|941974_942304_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.7e-60	100.0
QAV72518.1\|942313_943012_+\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	3.9e-134	99.1
QAV72519.1\|943017_943761_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.0e-149	97.6
QAV72520.1\|943697_944306_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	7.1e-100	93.6
QAV72521.1\|947850_948450_+	outer membrane protein	H6WZM8	Escherichia_phage	1.8e-103	92.5
QAV72522.1\|948509_949826_+\|tail	phage tail protein	Q6H9S9	Enterobacteria_phage	2.0e-67	95.6
QAV72523.1\|949827_950097_+\|tail	phage tail protein	A0A1I9LJT0	Stx_converting_phage	4.9e-45	98.9
QAV72524.1\|950273_951254_+	type III secretion system effector arginine glycosyltransferase NleB2	Q8HAB2	Salmonella_phage	2.9e-87	49.5
QAV72525.1\|951287_952307_+\|protease	type III secretion system effector zinc metalloprotease NleC	NA	NA	NA	NA
QAV76669.1\|952803_952965_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	3.9e-13	72.5
QAV72526.1\|953133_954015_+	T3SS effector protein NleH	A5LH48	Enterobacteria_phage	8.6e-147	90.1

DBSCAN-SWA_3

1171651 : 1241357

Escherichia_phage(26.09%)

protease,capsid,holin,head,tail,portal,transposase,integrase

attL 1180139:1180154|attR 1201505:1201520

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAV72708.1\|1171651_1173412_-\|protease	Lon protease family protein	NA	NA	NA	NA
QAV72709.1\|1173597_1174050_+	macrodomain Ter protein MatP	NA	NA	NA	NA
QAV72710.1\|1174125_1175166_-	porin OmpA	NA	NA	NA	NA
QAV72711.1\|1175522_1176032_-	cell division inhibitor SulA	NA	NA	NA	NA
QAV72712.1\|1176250_1176880_+	TfoX family DNA transformation protein	NA	NA	NA	NA
QAV72713.1\|1176842_1179005_-	TIGR01666 family membrane protein	NA	NA	NA	NA
QAV72714.1\|1179014_1179461_-	YccF domain-containing protein	NA	NA	NA	NA
QAV76675.1\|1179583_1181638_+	DNA helicase IV	A7KV33	Bacillus_phage	5.9e-21	27.9
1180139:1180154	attL	NA	NA	NA	NA
QAV72715.1\|1181669_1182128_-	methylglyoxal synthase	NA	NA	NA	NA
QAV72716.1\|1182223_1182886_-	DUF2057 family protein	NA	NA	NA	NA
QAV72717.1\|1183058_1183472_+	CoA-binding protein	NA	NA	NA	NA
QAV72718.1\|1183516_1183834_-	heat shock protein HspQ	NA	NA	NA	NA
QAV72719.1\|1183891_1185082_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
QAV72720.1\|1185176_1185455_+	acylphosphatase	NA	NA	NA	NA
QAV72721.1\|1185451_1185781_-	sulfurtransferase TusE	NA	NA	NA	NA
QAV72722.1\|1185871_1186531_-\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	1.8e-48	55.3
QAV76676.1\|1186736_1186949_+	hypothetical protein	NA	NA	NA	NA
QAV72723.1\|1186938_1187958_-\|integrase	integrase	A0A192Y7M7	Salmonella_phage	1.7e-85	49.7
QAV72724.1\|1187935_1188178_-	DUF4224 domain-containing protein	NA	NA	NA	NA
QAV72725.1\|1188245_1190717_-	exonuclease	A0A192Y6E0	Salmonella_phage	8.8e-56	56.6
QAV72726.1\|1190810_1191002_-	DUF1482 family protein	NA	NA	NA	NA
QAV72727.1\|1190998_1191187_-	cell division inhibition protein DicB	NA	NA	NA	NA
QAV72728.1\|1191453_1191759_+	hypothetical protein	NA	NA	NA	NA
QAV72729.1\|1191760_1191946_+	hypothetical protein	NA	NA	NA	NA
QAV72730.1\|1192132_1192522_-	hypothetical protein	NA	NA	NA	NA
QAV72731.1\|1192663_1192819_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	3.0e-07	53.2
QAV72732.1\|1192876_1193095_-	hypothetical protein	NA	NA	NA	NA
QAV72733.1\|1193096_1193384_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
QAV72734.1\|1193383_1193575_-	antitoxin	NA	NA	NA	NA
QAV72735.1\|1193602_1194004_-	helix-turn-helix domain-containing protein	A0A1B5FPF4	Escherichia_phage	7.4e-13	54.5
QAV72736.1\|1194112_1194385_+	hypothetical protein	A0A0U2S629	Escherichia_phage	1.1e-12	45.8
QAV72737.1\|1194368_1194794_+	Rha family transcriptional regulator	NA	NA	NA	NA
QAV72738.1\|1195000_1195456_-	hypothetical protein	NA	NA	NA	NA
QAV76677.1\|1195534_1196626_+	DNA-binding protein	V5URT9	Shigella_phage	5.1e-133	70.0
QAV72739.1\|1196632_1197379_+	replication protein	A0A088CBP4	Shigella_phage	6.2e-114	84.2
QAV72740.1\|1197400_1198171_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	6.1e-80	64.5
QAV72741.1\|1198186_1198600_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	9.8e-61	89.1
QAV72742.1\|1198951_1199725_-	alpha/beta hydrolase	NA	NA	NA	NA
QAV72743.1\|1199736_1199928_+	hypothetical protein	NA	NA	NA	NA
QAV72744.1\|1200090_1200228_-	hypothetical protein	Q7Y2Q9	Escherichia_phage	5.4e-08	96.6
QAV72745.1\|1200272_1200485_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.5e-25	95.4
QAV72746.1\|1200652_1200931_+	hypothetical protein	I6PCV7	Cronobacter_phage	5.7e-12	48.4
QAV72747.1\|1200932_1201982_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	1.2e-110	54.9
1201505:1201520	attR	NA	NA	NA	NA
QAV72748.1\|1201994_1202366_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.3e-35	63.7
QAV72749.1\|1202355_1202727_+	antitermination protein	Q777W5	Enterobacteria_phage	4.0e-53	83.2
QAV72750.1\|1202878_1203697_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
QAV72751.1\|1203983_1204223_+	hypothetical protein	Q9MC00	Enterobacteria_phage	7.7e-18	98.0
QAV72752.1\|1204317_1205031_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
QAV72753.1\|1205476_1205680_-	hypothetical protein	Q8VNP0	Enterobacteria_phage	1.8e-28	96.7
QAV72754.1\|1205797_1207648_+	DUF1737 domain-containing protein	B6DZ89	Enterobacteria_phage	0.0e+00	96.1
QAV72755.1\|1207823_1209036_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
QAV72756.1\|1209241_1209556_-	PerC family transcriptional regulator	NA	NA	NA	NA
QAV72757.1\|1210083_1210269_-	hypothetical protein	A0A0P0ZCT3	Stx2-converting_phage	1.2e-18	100.0
QAV72758.1\|1210490_1210604_-	hypothetical protein	A0A2L1IV24	Escherichia_phage	6.6e-12	100.0
QAV72759.1\|1210824_1211358_-	lysozyme	A0A1U9AJ98	Stx1_converting_phage	3.1e-99	94.4
QAV72760.1\|1211390_1211585_-	hypothetical protein	NA	NA	NA	NA
QAV72761.1\|1211517_1211790_+	hypothetical protein	NA	NA	NA	NA
QAV72762.1\|1211738_1212083_+	hypothetical protein	NA	NA	NA	NA
QAV72763.1\|1212045_1212252_-\|holin	holin	Q6H9V8	Enterobacteria_phage	4.5e-30	97.1
QAV72764.1\|1213002_1213278_+	hypothetical protein	A0A1I9KFT4	Aeromonas_phage	2.4e-10	51.5
QAV72765.1\|1213353_1213734_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
QAV72766.1\|1213730_1214078_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
QAV72767.1\|1214127_1215666_+\|transposase	IS66-like element ISEc8 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.0e-299	99.8
QAV72768.1\|1215715_1215958_+	DNA packaging protein	NA	NA	NA	NA
QAV72769.1\|1217843_1218050_+\|tail	phage tail protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
QAV72770.1\|1218046_1219639_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	8.7e-182	60.5
QAV72771.1\|1221169_1221517_+\|head	head decoration protein	C6ZCY1	Enterobacteria_phage	2.6e-22	58.1
QAV72772.1\|1221574_1221841_+\|capsid	major capsid protein E	NA	NA	NA	NA
QAV72773.1\|1221822_1222563_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	3.6e-130	98.0
QAV72774.1\|1222576_1223008_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.4e-41	68.1
QAV72775.1\|1223034_1223448_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	1.6e-42	82.2
QAV72776.1\|1223428_1226008_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	79.9
QAV72777.1\|1226004_1226334_+\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
QAV72778.1\|1226333_1227032_+\|tail	phage minor tail protein L	A0A0P0ZBE3	Stx2-converting_phage	2.9e-129	97.8
QAV72779.1\|1227042_1227786_+\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	8.6e-148	97.2
QAV76678.1\|1227731_1228364_+\|tail	tail assembly protein	A0A0P0ZC16	Stx2-converting_phage	5.8e-105	99.5
QAV76679.1\|1228317_1228524_+	hypothetical protein	NA	NA	NA	NA
QAV72780.1\|1228554_1229082_-	superoxide dismutase	Q9MC02	Salmonella_phage	4.8e-52	55.8
QAV72781.1\|1229215_1232689_+	host specificity protein J	A0A0P0ZCI5	Stx2-converting_phage	0.0e+00	96.2
QAV72782.1\|1232756_1233356_+	outer membrane protein	A0A0P0ZCF6	Stx2-converting_phage	8.8e-111	99.0
QAV72783.1\|1233420_1234734_+\|tail	phage tail protein	A0A0P0ZE15	Stx2-converting_phage	2.0e-83	99.1
QAV72784.1\|1234735_1235005_+\|tail	phage tail protein	H6WZN0	Escherichia_phage	1.4e-44	98.9
QAV72785.1\|1236338_1236521_-	hypothetical protein	H6WZN3	Escherichia_phage	1.1e-21	89.7
QAV72786.1\|1237138_1238257_+	twin-arginine translocation signal domain-containing protein	NA	NA	NA	NA
QAV72787.1\|1238253_1240047_+	hydrogenase 1 large subunit	NA	NA	NA	NA
QAV72788.1\|1240065_1240773_+	Ni/Fe-hydrogenase b-type cytochrome subunit	NA	NA	NA	NA
QAV72789.1\|1240769_1241357_+\|protease	hydrogenase 1 maturation protease	NA	NA	NA	NA

DBSCAN-SWA_4

1496126 : 1616675

158

Enterobacteria_phage(37.61%)

protease,capsid,lysis,holin,head,tail,terminase,portal,tRNA,transposase,integrase

attL 1562037:1562052|attR 1590291:1590306

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAV73028.1\|1496126_1496948_+	NAD-dependent protein deacylase	A0A2I7S9Y2	Vibrio_phage	5.6e-23	35.6
QAV73029.1\|1497103_1498150_-	spermidine/putrescine ABC transporter substrate-binding protein PotD	NA	NA	NA	NA
QAV73030.1\|1498146_1498941_-	spermidine/putrescine ABC transporter permease PotC	NA	NA	NA	NA
QAV73031.1\|1499107_1500226_-\|integrase	integrase	Q77Z04	Phage_21	1.0e-83	43.9
QAV73032.1\|1500194_1500464_-	excisionase	NA	NA	NA	NA
QAV76693.1\|1500525_1500915_-	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	1.3e-38	60.0
QAV73033.1\|1501047_1501563_+	hypothetical protein	NA	NA	NA	NA
QAV76694.1\|1501677_1501830_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	1.0e-07	55.3
QAV73034.1\|1502145_1502622_-	hypothetical protein	A0A2D1GNH0	Pseudomonas_phage	5.7e-12	53.4
QAV73035.1\|1502746_1503070_+	transcriptional regulator	A0A0R6PH31	Moraxella_phage	6.2e-10	44.9
QAV73036.1\|1503053_1503479_+	Rha family transcriptional regulator	NA	NA	NA	NA
QAV73037.1\|1503547_1504585_+	phage replisome organizer	A0A0U2RT81	Escherichia_phage	3.3e-89	79.5
QAV76695.1\|1504616_1505039_+	replication protein	A0A0U2JGJ0	Escherichia_phage	1.8e-73	91.4
QAV73038.1\|1505072_1505789_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	2.1e-71	62.4
QAV73039.1\|1505785_1506103_+	DNA-binding protein	A0A222YXX1	Escherichia_phage	1.1e-32	70.6
QAV73040.1\|1506099_1506402_+	DUF4406 domain-containing protein	A0A0U2SAZ1	Escherichia_phage	1.9e-45	87.9
QAV73041.1\|1506391_1506709_+	DUF4752 family protein	A0A1I9LJV1	Stx_converting_phage	2.1e-42	92.4
QAV73042.1\|1506662_1506980_+	hypothetical protein	A0A088CQ13	Enterobacteria_phage	4.4e-45	90.0
QAV73043.1\|1506966_1507404_+	ead/Ea22-like family protein	Q8VNQ2	Enterobacteria_phage	1.9e-38	94.0
QAV73044.1\|1507405_1507597_+	hypothetical protein	G9L660	Escherichia_phage	1.6e-26	98.4
QAV73045.1\|1507599_1508187_+	DUF551 domain-containing protein	K7PH57	Enterobacteria_phage	7.5e-38	45.8
QAV73046.1\|1508302_1508407_+	hypothetical protein	NA	NA	NA	NA
QAV73047.1\|1508595_1508808_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	3.1e-18	68.6
QAV73048.1\|1508975_1509254_+	hypothetical protein	I6PCV7	Cronobacter_phage	5.7e-12	48.4
QAV73049.1\|1509255_1510305_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	1.4e-106	53.2
QAV73050.1\|1510317_1510692_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	2.1e-33	62.7
QAV73051.1\|1510688_1511510_+	antitermination protein	K7P7B9	Enterobacteria_phage	1.3e-83	58.6
QAV76696.1\|1512130_1512274_+	DUF3927 domain-containing protein	H6WZJ7	Escherichia_phage	8.2e-07	67.4
QAV73052.1\|1512588_1514526_+	DUF1737 domain-containing protein	Q6H9W1	Enterobacteria_phage	2.5e-292	76.8
QAV73053.1\|1514673_1514856_+	DUF1378 family protein	A0A2R2Z345	Escherichia_phage	1.0e-14	67.8
QAV73054.1\|1514893_1515163_+	DUF826 domain-containing protein	A0A2R2Z348	Escherichia_phage	8.2e-08	75.3
QAV73055.1\|1515238_1515454_+\|holin	holin	Q6H9V8	Enterobacteria_phage	2.0e-33	100.0
QAV73056.1\|1515458_1515803_+	DUF1327 domain-containing protein	A0A0P0ZD64	Stx2-converting_phage	1.7e-58	99.1
QAV73057.1\|1515853_1516387_+	lysozyme	B6DZ92	Enterobacteria_phage	3.0e-102	99.4
QAV73058.1\|1516657_1517227_+	hypothetical protein	A0A1I9LJR6	Stx_converting_phage	3.1e-105	100.0
QAV73059.1\|1517226_1517373_+	hypothetical protein	A0A0P0ZE99	Stx2-converting_phage	2.6e-16	100.0
QAV73060.1\|1517600_1517807_+	hypothetical protein	H6WRZ6	Salmonella_phage	7.1e-12	64.7
QAV73061.1\|1517871_1518096_+	hypothetical protein	NA	NA	NA	NA
QAV73062.1\|1518452_1518593_+	hypothetical protein	NA	NA	NA	NA
QAV73063.1\|1518722_1518908_-	DUF3950 domain-containing protein	H6WZK6	Escherichia_phage	3.7e-20	90.4
QAV73064.1\|1518949_1519315_+	HNH endonuclease	B6ETE5	Enterobacteria_phage	3.1e-66	100.0
QAV73065.1\|1519283_1519415_+	DNase	H6WZK7	Escherichia_phage	2.4e-05	100.0
QAV73066.1\|1519606_1520170_+\|terminase	terminase small subunit	A0A0N7KZJ8	Stx2-converting_phage	8.1e-90	100.0
QAV73067.1\|1520166_1521828_+\|terminase	terminase large subunit	A0A0P0ZD10	Stx2-converting_phage	0.0e+00	100.0
QAV73068.1\|1521891_1523829_+\|capsid	phage major capsid protein	B6DZ99	Enterobacteria_phage	0.0e+00	100.0
QAV73069.1\|1523873_1524095_+	hypothetical protein	B6DZA0	Enterobacteria_phage	5.8e-36	100.0
QAV73070.1\|1524040_1526542_+\|portal	phage portal protein	B6DZA1	Enterobacteria_phage	0.0e+00	99.2
QAV73071.1\|1526621_1526948_+\|head,tail	phage gp6-like head-tail connector protein	A0A0P0ZDA0	Stx2-converting_phage	9.2e-54	100.0
QAV73072.1\|1526957_1527308_+\|head,tail	head-tail adaptor protein	A0A0P0ZCU6	Stx2-converting_phage	7.0e-60	100.0
QAV73073.1\|1527304_1527751_+	HK97 gp10 family phage protein	A0A0P0ZCD2	Stx2-converting_phage	8.1e-77	100.0
QAV73074.1\|1527747_1528092_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
QAV73075.1\|1528150_1528867_+\|tail	phage tail protein	A0A0P0ZDV1	Stx2-converting_phage	1.6e-127	100.0
QAV73076.1\|1528881_1529256_+\|tail	phage tail protein	A0A0P0ZE84	Stx2-converting_phage	4.6e-65	100.0
QAV76697.1\|1529351_1529561_+	DUF4035 domain-containing protein	A0A0P0ZED8	Stx2-converting_phage	2.6e-33	100.0
QAV73077.1\|1529608_1532851_+\|tail	phage tail tape measure protein	A0A0P0ZDY0	Stx2-converting_phage	0.0e+00	100.0
QAV73078.1\|1532843_1533185_+\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	5.1e-63	100.0
QAV73079.1\|1533184_1533883_+\|tail	phage minor tail protein L	A0A0P0ZBE3	Stx2-converting_phage	8.1e-132	98.3
QAV73080.1\|1533899_1534154_-	Arc family DNA-binding protein	NA	NA	NA	NA
QAV73081.1\|1534263_1534374_+	Arc family DNA-binding protein	NA	NA	NA	NA
QAV73082.1\|1534676_1535555_+	phage repressor protein/antirepressor Ant	I6R977	Salmonella_phage	2.5e-93	77.2
QAV73083.1\|1535608_1536346_+\|tail	phage tail protein	B6ETG2	Enterobacteria_phage	8.2e-151	100.0
QAV76698.1\|1536291_1536528_+\|tail	tail assembly protein	B6ETG3	Enterobacteria_phage	2.8e-20	80.3
QAV73084.1\|1536540_1536630_+	hypothetical protein	NA	NA	NA	NA
QAV73085.1\|1536649_1538998_+	type III secretion system effector E3 ubiquitin ligase NleL	NA	NA	NA	NA
QAV73086.1\|1539588_1542990_+	DUF4765 family protein	A0A0N7KZG3	Stx2-converting_phage	1.7e-219	39.2
QAV73087.1\|1543366_1543558_-	hypothetical protein	NA	NA	NA	NA
QAV73088.1\|1545093_1545219_+	NleB	Q8HAB2	Salmonella_phage	8.7e-05	58.3
QAV73089.1\|1545298_1545574_-	secretion protein EspO	NA	NA	NA	NA
QAV73090.1\|1545634_1546996_-	type III secretion protein GogB	Q9MBM1	Phage_Gifsy-1	1.4e-50	29.2
QAV73091.1\|1547116_1547329_-	hypothetical protein	NA	NA	NA	NA
QAV73092.1\|1547359_1548223_-	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	6.7e-11	28.7
QAV73093.1\|1548206_1549343_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	Q6GZ03	Mycoplasma_phage	5.5e-29	39.8
QAV73094.1\|1549592_1550819_+	peptidase T	NA	NA	NA	NA
QAV73095.1\|1550867_1551989_-	cupin domain-containing protein	NA	NA	NA	NA
QAV73096.1\|1552350_1553564_-\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	3.4e-170	99.7
QAV73097.1\|1553562_1554780_+	DUF4102 domain-containing protein	A0A2H4JB45	uncultured_Caudovirales_phage	6.1e-127	56.8
QAV73098.1\|1555144_1555333_+	AlpA family transcriptional regulator	A0A2H4JB58	uncultured_Caudovirales_phage	2.0e-13	66.0
QAV73099.1\|1555382_1555709_-	hypothetical protein	NA	NA	NA	NA
QAV73100.1\|1556137_1556335_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
QAV73101.1\|1556327_1556540_+	hypothetical protein	NA	NA	NA	NA
QAV73102.1\|1556529_1556994_+	hypothetical protein	NA	NA	NA	NA
QAV73103.1\|1556986_1557220_+	hypothetical protein	NA	NA	NA	NA
QAV73104.1\|1557225_1557525_+	DUF4222 domain-containing protein	NA	NA	NA	NA
QAV73105.1\|1557521_1558922_+	AAA family ATPase	A0A2H4JFA4	uncultured_Caudovirales_phage	3.6e-115	49.3
QAV73106.1\|1559122_1559374_+	hypothetical protein	NA	NA	NA	NA
QAV73107.1\|1559370_1559781_+	single-stranded DNA-binding protein	NA	NA	NA	NA
QAV73108.1\|1559791_1560064_+	PerC family transcriptional regulator	NA	NA	NA	NA
QAV73109.1\|1560020_1560149_+	trigger factor	NA	NA	NA	NA
QAV73110.1\|1560190_1560415_+	hypothetical protein	NA	NA	NA	NA
QAV73111.1\|1560666_1560873_+	hypothetical protein	NA	NA	NA	NA
QAV73112.1\|1560872_1561928_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.5e-68	43.3
QAV73113.1\|1561940_1562276_+\|head	head decoration protein	NA	NA	NA	NA
1562037:1562052	attL	NA	NA	NA	NA
QAV73114.1\|1562288_1562702_+\|head,tail	phage head-tail connector protein	NA	NA	NA	NA
QAV73115.1\|1562907_1563450_+\|terminase	terminase	O64316	Escherichia_phage	1.8e-33	44.2
QAV73116.1\|1563705_1563987_+	hypothetical protein	NA	NA	NA	NA
QAV73117.1\|1564587_1566048_-	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
QAV73118.1\|1566047_1566719_-	two-component system response regulator PhoP	NA	NA	NA	NA
QAV73119.1\|1566887_1568258_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.2e-108	44.9
QAV73120.1\|1568261_1568903_-	lysogenization regulator HflD	NA	NA	NA	NA
QAV73121.1\|1568938_1570045_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
QAV73122.1\|1570098_1570560_-	NUDIX hydrolase	NA	NA	NA	NA
QAV73123.1\|1570569_1571223_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
QAV73124.1\|1571394_1572645_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-23	100.0
QAV73125.1\|1572758_1573901_-\|integrase	integrase	O21940	Phage_21	8.1e-206	100.0
QAV73126.1\|1573890_1574127_-	excisionase	NA	NA	NA	NA
QAV73127.1\|1574230_1575055_+	replication protein	A0A0K2FJ31	Enterobacteria_phage	3.8e-96	69.3
QAV73128.1\|1575051_1575753_+	Replication protein P	A0A0P0ZD31	Stx2-converting_phage	1.3e-129	99.6
QAV73129.1\|1575749_1576052_+	protein ren	A0A0N6WES4	Escherichia_phage	1.1e-42	95.7
QAV73130.1\|1576119_1576452_+	multidrug SMR transporter	NA	NA	NA	NA
QAV73131.1\|1576516_1576639_+	hypothetical protein	NA	NA	NA	NA
QAV73132.1\|1576696_1578223_+	recombinase family protein	Q3HQV4	Burkholderia_phage	1.2e-31	31.1
QAV73133.1\|1578342_1578534_+	hypothetical protein	NA	NA	NA	NA
QAV73134.1\|1578724_1579180_+	hypothetical protein	I6PD71	Cronobacter_phage	8.6e-58	64.9
QAV73135.1\|1579179_1579350_+	hypothetical protein	K7P7K0	Enterobacteria_phage	5.3e-13	67.9
QAV73136.1\|1579342_1579633_+	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	2.8e-46	92.7
QAV73137.1\|1579629_1579992_+	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	7.3e-60	95.7
QAV73138.1\|1579988_1580129_+	YlcG family protein	K7PHH3	Enterobacteria_phage	7.7e-10	71.1
QAV73139.1\|1580125_1580815_+	antitermination protein	I6PDF8	Cronobacter_phage	1.7e-57	48.9
QAV76699.1\|1581136_1581442_+\|holin	holin	A0A286N2Q5	Klebsiella_phage	7.0e-40	87.6
QAV73140.1\|1581428_1581905_+	lysozyme	K7PKV2	Enterobacteria_phage	4.3e-84	95.6
QAV73141.1\|1582121_1582304_+\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	4.7e-15	93.3
QAV73142.1\|1582394_1582688_-	serum resistance lipoprotein Bor	K7PL54	Enterobacteria_phage	1.5e-47	99.0
QAV73143.1\|1582979_1583390_-	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	2.7e-71	98.5
QAV73144.1\|1583675_1583882_+	hypothetical protein	A0A0K2FJ18	Enterobacteria_phage	5.8e-30	100.0
QAV73145.1\|1584046_1584241_-	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	1.5e-27	98.4
QAV73146.1\|1584629_1585175_+	DNA-packaging protein NohD	A0A0K2FIG2	Enterobacteria_phage	2.6e-93	97.8
QAV73147.1\|1585149_1587075_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.1
QAV73148.1\|1587071_1587278_+\|tail	phage tail protein	A0A2R9YJL2	Escherichia_phage	2.2e-29	98.5
QAV73149.1\|1587274_1588876_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.4e-307	98.7
QAV73150.1\|1588856_1590176_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	3.4e-232	98.2
QAV73151.1\|1590185_1590518_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	3.8e-55	99.1
1590291:1590306	attR	NA	NA	NA	NA
QAV73152.1\|1590572_1591598_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	5.6e-190	98.5
QAV73153.1\|1591639_1592038_+	DNA-packaging protein FI	A0A0K2FIR1	Enterobacteria_phage	3.5e-63	98.5
QAV73154.1\|1592049_1592403_+\|tail	phage tail protein	A0A2R9YJJ5	Escherichia_phage	9.9e-62	99.1
QAV73155.1\|1592414_1592993_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.3e-79	99.0
QAV73156.1\|1592989_1593385_+\|tail	phage tail protein	A0A0K2FIF4	Enterobacteria_phage	1.0e-70	100.0
QAV73157.1\|1593392_1594133_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	8.3e-127	95.9
QAV73158.1\|1594148_1594571_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.4e-70	96.4
QAV73159.1\|1594552_1594987_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
QAV73160.1\|1597524_1597854_+\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	2.5e-59	100.0
QAV73161.1\|1597853_1598552_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	2.1e-132	98.7
QAV73162.1\|1598557_1599301_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.0e-149	97.6
QAV73163.1\|1599237_1599870_+\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	1.7e-96	99.5
QAV73164.1\|1599930_1603329_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	90.7
QAV73165.1\|1603395_1603995_+	Ail/Lom family protein	A0A291AWV3	Escherichia_phage	3.0e-111	99.5
QAV73166.1\|1604059_1606975_+	hypothetical protein	Q6H9S9	Enterobacteria_phage	1.1e-57	98.3
QAV73167.1\|1606974_1607556_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	6.1e-101	93.7
QAV73168.1\|1607675_1608566_-	manganese catalase family protein	NA	NA	NA	NA
QAV73169.1\|1608584_1609091_-	ferritin-like domain-containing protein	NA	NA	NA	NA
QAV73170.1\|1609127_1609628_-	ferritin-like domain-containing protein	NA	NA	NA	NA
QAV73171.1\|1609706_1609889_-	stress-induced acidophilic repeat motif-containing protein	NA	NA	NA	NA
QAV73172.1\|1610386_1611055_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
QAV73173.1\|1611111_1611360_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.7e-12	76.5
QAV73174.1\|1611435_1611816_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
QAV73175.1\|1611812_1612160_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
QAV73176.1\|1612209_1613748_+\|transposase	IS66-like element ISEc8 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.5e-300	100.0
QAV73177.1\|1614050_1615535_-	alpha/beta hydrolase	NA	NA	NA	NA
QAV73178.1\|1615721_1616675_-\|protease	omptin family outer membrane protease OmpT	NA	NA	NA	NA

DBSCAN-SWA_5

1701259 : 1826257

140

Stx2-converting_phage(39.81%)

protease,capsid,holin,head,tail,terminase,portal,transposase,integrase

attL 1701096:1701123|attR 1810729:1810756

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1701096:1701123	attL	NA	NA	NA	NA
QAV73252.1\|1701259_1702390_-\|integrase	integrase	O21940	Phage_21	3.4e-103	51.4
QAV73253.1\|1702367_1702616_-	excisionase	NA	NA	NA	NA
QAV73254.1\|1702680_1705152_-	exonuclease	A0A192Y6E0	Salmonella_phage	1.5e-58	58.6
QAV73255.1\|1705244_1705436_-	DUF1482 family protein	NA	NA	NA	NA
QAV73256.1\|1705432_1705621_-	cell division inhibition protein DicB	NA	NA	NA	NA
QAV76704.1\|1706018_1706186_+	hypothetical protein	NA	NA	NA	NA
QAV73257.1\|1706179_1706413_+	hypothetical protein	NA	NA	NA	NA
QAV73258.1\|1706390_1706798_-	hypothetical protein	A0A2R2Z306	Escherichia_phage	7.0e-11	37.8
QAV73259.1\|1706820_1707039_-	hypothetical protein	NA	NA	NA	NA
QAV73260.1\|1707111_1707411_-	hypothetical protein	NA	NA	NA	NA
QAV73261.1\|1707674_1708082_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	9.8e-29	49.6
QAV73262.1\|1708158_1708386_+	transcriptional regulator	NA	NA	NA	NA
QAV73263.1\|1708369_1708921_+	hypothetical protein	NA	NA	NA	NA
QAV73264.1\|1708892_1709933_+	DNA-binding protein	A0A0U2RT81	Escherichia_phage	7.9e-91	87.2
QAV76705.1\|1709964_1710387_+	replication protein	A0A0U2JGJ0	Escherichia_phage	1.2e-77	98.6
QAV73265.1\|1710573_1711155_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	8.6e-79	80.2
QAV73266.1\|1711151_1711316_+	hypothetical protein	NA	NA	NA	NA
QAV73267.1\|1712014_1712773_+	AcfC family adhesin Paa	NA	NA	NA	NA
QAV73268.1\|1713051_1713264_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.4e-15	70.0
QAV73269.1\|1713484_1713742_+	hypothetical protein	NA	NA	NA	NA
QAV73270.1\|1713811_1714090_+	hypothetical protein	I6PCV7	Cronobacter_phage	2.2e-11	48.4
QAV73271.1\|1714091_1715138_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	4.2e-108	54.2
QAV73272.1\|1715150_1715510_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	3.6e-35	60.9
QAV73273.1\|1715518_1716049_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	9.3e-72	72.6
QAV73274.1\|1716290_1716488_+	TrmB family transcriptional regulator	S5MQK8	Escherichia_phage	1.0e-28	98.5
QAV73275.1\|1716638_1717697_+	site-specific DNA-methyltransferase	S5MDR0	Escherichia_phage	1.1e-199	94.3
QAV76706.1\|1718188_1718374_+	hypothetical protein	Q5MBW5	Stx1-converting_phage	4.6e-26	94.6
QAV73276.1\|1718493_1720347_+	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	0.0e+00	97.9
QAV73277.1\|1720496_1720712_+\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	4.5e-33	98.6
QAV76707.1\|1720716_1721061_+	DUF1327 domain-containing protein	B6DZ91	Enterobacteria_phage	4.5e-59	100.0
QAV73278.1\|1721111_1721645_+	lysozyme	B6DZ92	Enterobacteria_phage	3.5e-103	100.0
QAV73279.1\|1721915_1722485_+	hypothetical protein	A0A1I9LJR6	Stx_converting_phage	3.1e-105	100.0
QAV73280.1\|1722484_1722631_+	hypothetical protein	A0A0P0ZE99	Stx2-converting_phage	2.6e-16	100.0
QAV73281.1\|1722858_1723044_+	hypothetical protein	A0A0P0ZCT3	Stx2-converting_phage	1.2e-18	100.0
QAV73282.1\|1723468_1723696_-	DUF3950 domain-containing protein	A0A0P0ZE23	Stx2-converting_phage	1.7e-35	100.0
QAV73283.1\|1723737_1724103_+	HNH endonuclease	B6DZ96	Enterobacteria_phage	1.5e-65	100.0
QAV73284.1\|1724392_1724956_+\|terminase	terminase small subunit	A0A0N7KZJ8	Stx2-converting_phage	8.1e-90	100.0
QAV73285.1\|1724952_1726614_+\|terminase	terminase large subunit	A0A0P0ZD10	Stx2-converting_phage	0.0e+00	99.5
QAV73286.1\|1726677_1728615_+\|capsid	phage major capsid protein	B6DZ99	Enterobacteria_phage	0.0e+00	100.0
QAV73287.1\|1728659_1728881_+	hypothetical protein	B6DZA0	Enterobacteria_phage	5.8e-36	100.0
QAV73288.1\|1728826_1731328_+\|portal	phage portal protein	B6DZA1	Enterobacteria_phage	0.0e+00	99.2
QAV73289.1\|1731407_1731734_+\|head,tail	phage gp6-like head-tail connector protein	A0A0P0ZDA0	Stx2-converting_phage	9.2e-54	100.0
QAV73290.1\|1731743_1732094_+\|head,tail	head-tail adaptor protein	A0A0P0ZCU6	Stx2-converting_phage	7.0e-60	100.0
QAV73291.1\|1732090_1732537_+	HK97 gp10 family phage protein	A0A0P0ZCD2	Stx2-converting_phage	8.1e-77	100.0
QAV73292.1\|1732533_1732878_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
QAV73293.1\|1732936_1733653_+\|tail	phage tail protein	A0A0P0ZDV1	Stx2-converting_phage	1.6e-127	100.0
QAV73294.1\|1733667_1734042_+\|tail	phage tail protein	A0A0P0ZE84	Stx2-converting_phage	4.6e-65	100.0
QAV76708.1\|1734137_1734347_+	DUF4035 domain-containing protein	A0A0P0ZED8	Stx2-converting_phage	2.6e-33	100.0
QAV73295.1\|1734394_1737637_+\|tail	phage tail tape measure protein	A0A0P0ZDY0	Stx2-converting_phage	0.0e+00	100.0
QAV73296.1\|1737629_1737971_+\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	5.1e-63	100.0
QAV73297.1\|1737970_1738669_+\|tail	phage minor tail protein L	A0A0P0ZBE3	Stx2-converting_phage	1.5e-133	100.0
QAV73298.1\|1738679_1739423_+\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	7.7e-149	98.4
QAV76710.1\|1739368_1740001_+\|tail	tail assembly protein	B6ETG3	Enterobacteria_phage	3.9e-101	97.1
QAV73299.1\|1740343_1741519_+	host specificity protein J	Q9EYE6	Enterobacteria_phage	1.2e-228	96.9
QAV76709.1\|1741470_1743816_+	host specificity protein J	Q9EYE7	Enterobacteria_phage	0.0e+00	99.7
QAV73300.1\|1743883_1744483_+	outer membrane protein	Q9EV15	Enterobacteria_phage	1.6e-107	96.5
QAV73301.1\|1744634_1745948_+\|tail	phage tail protein	A0A0P0ZE15	Stx2-converting_phage	2.5e-81	98.4
QAV73302.1\|1745949_1746219_+\|tail	phage tail protein	A0A1U9AJC2	Stx1_converting_phage	3.2e-44	98.9
QAV76711.1\|1746363_1746906_+	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	1.1e-62	67.2
QAV73303.1\|1747245_1748571_-	type III secretion system effector NleA	H6WZN2	Escherichia_phage	1.9e-214	81.2
QAV76712.1\|1748838_1749027_+	hypothetical protein	NA	NA	NA	NA
QAV73304.1\|1750168_1750270_+	non-LEE-encoded type III effector F	NA	NA	NA	NA
QAV73305.1\|1751235_1752774_-\|transposase	IS66-like element ISEc8 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.5e-300	100.0
QAV73306.1\|1752823_1753171_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
QAV73307.1\|1753167_1753548_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
QAV73308.1\|1753887_1754166_-	secretion protein EspO	NA	NA	NA	NA
QAV76713.1\|1754593_1754740_+	hypothetical protein	NA	NA	NA	NA
QAV73309.1\|1754876_1755524_-	DUF1076 domain-containing protein	B6ETE1	Enterobacteria_phage	1.6e-41	41.1
QAV73310.1\|1755707_1756298_+	bfpT-regulated chaperone	NA	NA	NA	NA
QAV76714.1\|1758026_1758455_+	DUF1076 domain-containing protein	B6DZB9	Enterobacteria_phage	1.4e-22	42.1
QAV76715.1\|1759048_1759267_-	hypothetical protein	NA	NA	NA	NA
QAV73311.1\|1759754_1760885_-\|integrase	integrase	O21940	Phage_21	4.9e-102	50.9
QAV73312.1\|1760862_1761111_-	excisionase	NA	NA	NA	NA
QAV73313.1\|1761175_1763620_-	exonuclease	V5UQJ3	Shigella_phage	2.2e-176	58.5
QAV73314.1\|1763712_1763901_-	DUF1482 family protein	NA	NA	NA	NA
QAV73315.1\|1763897_1764086_-	cell division inhibitor	NA	NA	NA	NA
QAV73316.1\|1764573_1764726_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	2.5e-06	51.1
QAV73317.1\|1764894_1765284_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
QAV73318.1\|1765386_1765662_+	Rha family transcriptional regulator	A0A0M4QX15	Salmonella_phage	1.1e-15	54.8
QAV73319.1\|1765645_1766071_+	Rha family transcriptional regulator	NA	NA	NA	NA
QAV73320.1\|1766093_1767047_+	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	5.2e-73	51.7
QAV73321.1\|1767053_1767794_+	DNA replication protein DnaC	V5UQI5	Shigella_phage	7.8e-117	85.6
QAV73322.1\|1767823_1768594_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	3.8e-82	66.0
QAV73323.1\|1768609_1769005_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	1.0e-30	51.4
QAV76716.1\|1769061_1769418_+	hypothetical protein	A0A2R2Z307	Escherichia_phage	3.7e-56	94.9
QAV73324.1\|1769466_1769679_+	hypothetical protein	A0A2R2Z310	Escherichia_phage	1.4e-31	87.1
QAV73325.1\|1769714_1770086_+	hypothetical protein	A0A0N7KZJ2	Stx2-converting_phage	1.3e-48	78.0
QAV73326.1\|1770082_1770445_+	DUF551 domain-containing protein	A0A0P0ZCX1	Stx2-converting_phage	8.6e-69	98.3
QAV73327.1\|1770560_1770665_+	hypothetical protein	NA	NA	NA	NA
QAV73328.1\|1770853_1771066_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.1e-26	94.3
QAV73329.1\|1771595_1771874_+	hypothetical protein	I6PCV7	Cronobacter_phage	1.1e-10	46.9
QAV73330.1\|1772937_1773312_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	2.4e-34	62.7
QAV73331.1\|1773308_1774130_+	antitermination protein	K7P7B9	Enterobacteria_phage	1.2e-81	61.2
QAV73332.1\|1774356_1774554_+	TrmB family transcriptional regulator	S5MQK8	Escherichia_phage	1.8e-28	98.5
QAV73333.1\|1774704_1775763_+	site-specific DNA-methyltransferase	S5MDR0	Escherichia_phage	2.3e-207	99.1
QAV73334.1\|1776254_1778105_+	DUF1737 domain-containing protein	B6DZ89	Enterobacteria_phage	0.0e+00	99.2
QAV73335.1\|1778552_1778759_+\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	2.4e-31	100.0
QAV73336.1\|1778758_1779256_+	lysozyme	A0A0N7KZA0	Stx2-converting_phage	9.9e-92	99.4
QAV73337.1\|1779472_1779658_+	hypothetical protein	A0A1U9AJA4	Stx1_converting_phage	1.7e-20	80.3
QAV73338.1\|1780185_1780500_+	PerC family transcriptional regulator	NA	NA	NA	NA
QAV73339.1\|1780581_1780806_-	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	2.7e-20	92.5
QAV73340.1\|1780847_1781213_+	HNH endonuclease	A0A0P0ZCH0	Stx2-converting_phage	2.0e-65	100.0
QAV73341.1\|1781501_1782065_+\|terminase	terminase small subunit	A0A0N7KZJ8	Stx2-converting_phage	8.1e-90	100.0
QAV73342.1\|1782061_1783723_+\|terminase	terminase large subunit	A0A0P0ZD10	Stx2-converting_phage	0.0e+00	100.0
QAV73343.1\|1783786_1785724_+\|capsid	phage major capsid protein	B6DZ99	Enterobacteria_phage	0.0e+00	100.0
QAV73344.1\|1785768_1785990_+	hypothetical protein	B6DZA0	Enterobacteria_phage	5.8e-36	100.0
QAV73345.1\|1785935_1788521_+\|portal	phage portal protein	B6DZA1	Enterobacteria_phage	0.0e+00	98.6
QAV73346.1\|1788517_1788844_+\|head,tail	phage gp6-like head-tail connector protein	A0A0P0ZDA0	Stx2-converting_phage	9.2e-54	100.0
QAV73347.1\|1788853_1789204_+\|head,tail	head-tail adaptor protein	A0A0P0ZCU6	Stx2-converting_phage	7.0e-60	100.0
QAV73348.1\|1789200_1789647_+	HK97 gp10 family phage protein	A0A0P0ZCD2	Stx2-converting_phage	8.1e-77	100.0
QAV73349.1\|1789643_1789988_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
QAV73350.1\|1790046_1790763_+\|tail	phage tail protein	A0A0P0ZDV1	Stx2-converting_phage	1.6e-127	100.0
QAV73351.1\|1790777_1791152_+\|tail	phage tail protein	A0A0P0ZE84	Stx2-converting_phage	4.6e-65	100.0
QAV76717.1\|1791247_1791457_+	DUF4035 domain-containing protein	A0A0P0ZED8	Stx2-converting_phage	2.6e-33	100.0
QAV73352.1\|1791504_1794747_+\|tail	phage tail tape measure protein	A0A0P0ZDY0	Stx2-converting_phage	0.0e+00	100.0
QAV73353.1\|1794739_1795081_+\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	5.1e-63	100.0
QAV73354.1\|1795080_1795779_+\|tail	phage minor tail protein L	A0A0P0ZBE3	Stx2-converting_phage	8.1e-132	98.3
QAV73355.1\|1795789_1796533_+\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	6.6e-148	97.6
QAV76718.1\|1796478_1797111_+\|tail	tail assembly protein	Q6H9T3	Enterobacteria_phage	3.5e-102	95.7
QAV73356.1\|1797357_1801194_+	host specificity protein J	B6DZB5	Enterobacteria_phage	0.0e+00	87.2
QAV73357.1\|1801260_1801860_+	Ail/Lom family protein	A0A0P0ZE39	Stx2-converting_phage	3.7e-109	98.0
QAV73358.1\|1801924_1803238_+\|tail	phage tail protein	A0A0P0ZCC1	Stx2-converting_phage	6.5e-82	98.6
QAV73359.1\|1803239_1803509_+\|tail	phage tail protein	B6DZB8	Enterobacteria_phage	1.6e-43	97.8
QAV73360.1\|1805157_1806371_-\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	3.4e-170	99.7
QAV73361.1\|1810906_1811413_-	ferritin-like domain-containing protein	NA	NA	NA	NA
1810729:1810756	attR	NA	NA	NA	NA
QAV76719.1\|1811458_1811959_-	ferritin-like domain-containing protein	NA	NA	NA	NA
QAV73362.1\|1812044_1812224_-	hypothetical protein	NA	NA	NA	NA
QAV73363.1\|1812604_1813411_-	tryptophan synthase subunit alpha	NA	NA	NA	NA
QAV73364.1\|1813410_1814604_-	tryptophan synthase subunit beta	NA	NA	NA	NA
QAV76720.1\|1814615_1815974_-	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	7.3e-36	40.3
QAV73365.1\|1815977_1817573_-	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	A0A0N7IRD9	Acinetobacter_phage	5.0e-52	38.2
QAV73366.1\|1817572_1819135_-	anthranilate synthase component I	NA	NA	NA	NA
QAV76721.1\|1819226_1819271_-	trp operon leader peptide	NA	NA	NA	NA
QAV73367.1\|1819408_1820290_+	5'-3' exoribonuclease	NA	NA	NA	NA
QAV73368.1\|1820286_1820907_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
QAV73369.1\|1820934_1822518_+	DUF2207 domain-containing protein	NA	NA	NA	NA
QAV73370.1\|1822730_1823603_+	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA
QAV73371.1\|1823642_1824233_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
QAV73372.1\|1824229_1824988_-	YciK family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	6.7e-07	23.9
QAV73373.1\|1825207_1826257_+\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	1.3e-21	31.5

DBSCAN-SWA_6

2098976 : 2190575

119

Enterobacteria_phage(30.56%)

capsid,holin,head,tail,terminase,portal,transposase,integrase

attL 2102040:2102099|attR 2147920:2148317

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAV73600.1\|2098976_2099180_+	putative selenium delivery protein YdfZ	J9Q802	Salmonella_phage	1.6e-11	55.2
QAV73601.1\|2099215_2100676_-	mannitol dehydrogenase family protein	H8ZJP8	Ostreococcus_tauri_virus	1.9e-42	29.6
QAV73602.1\|2100764_2102048_-	MFS transporter	NA	NA	NA	NA
2102040:2102099	attL	NA	NA	NA	NA
QAV76729.1\|2102107_2102422_+	DinI family protein	Q687E4	Enterobacteria_phage	2.4e-27	83.3
QAV73603.1\|2102418_2102553_-\|capsid	capsid protein	NA	NA	NA	NA
QAV73604.1\|2102583_2103225_-	DUF1076 domain-containing protein	B6DZC0	Enterobacteria_phage	3.8e-104	96.7
QAV73605.1\|2103306_2103936_-	DUF1076 domain-containing protein	B6DZB9	Enterobacteria_phage	6.1e-78	91.5
QAV73606.1\|2104008_2104584_-	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	4.1e-89	88.9
QAV73607.1\|2104697_2104967_-\|tail	phage tail protein	H6WZN0	Escherichia_phage	1.4e-44	98.9
QAV73608.1\|2104968_2106282_-\|tail	phage tail protein	A0A0P0ZE15	Stx2-converting_phage	3.8e-82	98.6
QAV73609.1\|2106346_2106946_-	outer membrane protein	A0A0P0ZE39	Stx2-converting_phage	1.2e-110	100.0
QAV73610.1\|2107013_2110493_-	host specificity protein J	B6DZB5	Enterobacteria_phage	0.0e+00	99.5
QAV76730.1\|2110739_2111372_-\|tail	tail assembly protein	Q6H9T3	Enterobacteria_phage	3.5e-102	95.7
QAV73611.1\|2111317_2112061_-\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	3.7e-143	95.5
QAV73612.1\|2112071_2112770_-\|tail	phage minor tail protein L	A0A0P0ZBE3	Stx2-converting_phage	1.2e-130	97.8
QAV73613.1\|2112769_2113099_-\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
QAV73614.1\|2113095_2115708_-\|tail	phage tail tape measure protein	Q687F3	Enterobacteria_phage	0.0e+00	95.9
QAV73615.1\|2115688_2116102_-\|tail	phage tail assembly protein T	Q687F4	Enterobacteria_phage	3.2e-43	83.2
QAV73616.1\|2116128_2116551_-\|tail	phage minor tail protein G	Q687F5	Enterobacteria_phage	2.4e-70	97.9
QAV73617.1\|2116564_2117317_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	5.8e-136	100.0
QAV73618.1\|2117324_2117720_-\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	3.3e-58	81.7
QAV73619.1\|2117716_2118250_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	5.9e-58	66.7
QAV73620.1\|2118264_2118618_-\|tail	phage tail protein	A0A2R9YJJ5	Escherichia_phage	1.9e-57	92.3
QAV73621.1\|2118629_2119028_-	DNA-packaging protein FI	A0A0K2FIR1	Enterobacteria_phage	3.5e-63	98.5
QAV73622.1\|2119069_2120095_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	9.6e-190	98.5
QAV73623.1\|2120150_2120483_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	3.8e-55	99.1
QAV73624.1\|2120492_2121812_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	3.4e-232	98.2
QAV73625.1\|2121792_2123394_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.4e-307	98.7
QAV73626.1\|2123390_2123597_-\|tail	phage tail protein	A0A2R9YJL2	Escherichia_phage	2.2e-29	98.5
QAV73627.1\|2123593_2125519_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	98.0
QAV73628.1\|2125493_2126039_-\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	9.6e-80	83.3
QAV73629.1\|2126152_2126410_+	hypothetical protein	A0A0K2FJC5	Escherichia_phage	1.3e-10	91.4
QAV73630.1\|2126425_2126650_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	1.7e-19	90.6
QAV73631.1\|2126731_2127046_-	PerC family transcriptional regulator	NA	NA	NA	NA
QAV73632.1\|2127571_2127757_-	hypothetical protein	A0A1U9AJA4	Stx1_converting_phage	1.7e-20	80.3
QAV73633.1\|2127979_2128126_-	hypothetical protein	A0A0P0ZG36	Escherichia_phage	1.1e-11	87.0
QAV73634.1\|2128125_2128695_-	hypothetical protein	A0A1I9LJR6	Stx_converting_phage	3.1e-105	100.0
QAV73635.1\|2128965_2129499_-	lysozyme	B6DZ92	Enterobacteria_phage	3.5e-103	100.0
QAV76731.1\|2129549_2129894_-	DUF1327 domain-containing protein	B6DZ91	Enterobacteria_phage	4.5e-59	100.0
QAV73636.1\|2129898_2130105_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	4.0e-31	98.5
QAV73637.1\|2130553_2132404_-	DUF1737 domain-containing protein	B6DZ89	Enterobacteria_phage	0.0e+00	98.9
QAV73638.1\|2132881_2133313_-	tellurite resistance protein	H6WZJ6	Escherichia_phage	1.6e-66	96.5
QAV73639.1\|2133763_2134477_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
QAV73640.1\|2134612_2134810_-	TrmB family transcriptional regulator	S5MQK8	Escherichia_phage	8.9e-28	96.9
QAV73641.1\|2135034_2135589_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	1.0e-65	67.4
QAV73642.1\|2135651_2135957_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	7.1e-32	66.3
QAV73643.1\|2135969_2137019_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	1.2e-110	54.6
QAV73644.1\|2137020_2137293_-	hypothetical protein	S4TNP0	Salmonella_phage	1.1e-12	53.0
QAV73645.1\|2137414_2137759_-	YgiW/YdeI family stress tolerance OB fold protein	A0A1I9LJU6	Stx_converting_phage	6.1e-56	99.1
QAV73646.1\|2137878_2138091_-	type I toxin-antitoxin system Hok family toxin	A0A0P0ZAX5	Stx2-converting_phage	6.0e-30	100.0
QAV73647.1\|2138324_2138882_-	DUF551 domain-containing protein	A0A0N7KZV3	Escherichia_phage	2.8e-34	41.7
QAV73648.1\|2138883_2139102_-	DUF4014 domain-containing protein	A0A2R2Z311	Escherichia_phage	2.3e-21	72.2
QAV73649.1\|2139229_2139541_-	hypothetical protein	A0A0U2QV73	Escherichia_phage	7.2e-56	92.2
QAV73650.1\|2139533_2139761_-	hypothetical protein	A0A1B5FPG2	Escherichia_phage	5.1e-11	49.3
QAV73651.1\|2139757_2140039_-	DNA-binding protein	A0A222YXX1	Escherichia_phage	1.0e-29	73.6
QAV73652.1\|2140071_2140788_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	3.3e-72	62.8
QAV76732.1\|2140821_2141244_-	replication protein	A0A0U2JGJ0	Escherichia_phage	5.7e-72	90.0
QAV73653.1\|2141275_2142319_-	phage replisome organizer	A0A0U2RT81	Escherichia_phage	1.4e-82	65.1
QAV73654.1\|2142387_2142813_-	Rha family transcriptional regulator	NA	NA	NA	NA
QAV73655.1\|2142796_2143039_-	hypothetical protein	H9C161	Pectobacterium_phage	4.8e-07	55.8
QAV76733.1\|2143430_2143769_+	peptidase S24	H9C160	Pectobacterium_phage	1.9e-06	30.1
QAV76734.1\|2144061_2144214_+	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	5.1e-07	53.2
QAV73656.1\|2144225_2144864_+	hypothetical protein	A0A2R2Z306	Escherichia_phage	2.5e-07	41.9
QAV73657.1\|2144864_2145074_-	hypothetical protein	NA	NA	NA	NA
QAV73658.1\|2145638_2145827_+	cell division inhibitor	NA	NA	NA	NA
QAV73659.1\|2145823_2146012_+	DUF1482 family protein	NA	NA	NA	NA
QAV73660.1\|2146104_2147349_+	exonuclease	H6WRX1	Salmonella_phage	1.4e-86	50.3
QAV73661.1\|2147345_2147882_+\|integrase	site-specific integrase	Q859D2	Escherichia_coli_phage	4.8e-60	63.0
QAV76735.1\|2147987_2148302_+	DinI family protein	Q687E4	Enterobacteria_phage	2.4e-27	83.3
QAV73662.1\|2149264_2149645_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
2147920:2148317	attR	NA	NA	NA	NA
QAV73663.1\|2149641_2149989_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
QAV73664.1\|2150038_2151577_+\|transposase	IS66-like element ISEc8 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.5e-300	100.0
QAV73665.1\|2152159_2152810_-	DUF1076 domain-containing protein	B6ETE1	Enterobacteria_phage	1.2e-121	99.1
QAV73666.1\|2152794_2153142_-	hypothetical protein	B6ETE2	Enterobacteria_phage	6.1e-48	96.8
QAV73667.1\|2153519_2154095_-	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	4.1e-57	60.5
QAV73668.1\|2154208_2154478_-\|tail	phage tail protein	H6WZN0	Escherichia_phage	6.4e-45	98.9
QAV73669.1\|2154479_2155649_-\|tail	phage tail protein	B6DZB7	Enterobacteria_phage	3.6e-84	97.2
QAV73670.1\|2155713_2156313_-	outer membrane protein	A0A0P0ZE39	Stx2-converting_phage	1.2e-110	100.0
QAV73671.1\|2156380_2156596_-	hypothetical protein	Q9LA64	Enterobacterial_phage	1.0e-32	97.2
QAV73672.1\|2156598_2159859_-	host specificity protein J	A0A0P0ZBW1	Stx2-converting_phage	0.0e+00	92.3
QAV73673.1\|2160024_2161237_+\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	6.5e-169	99.7
QAV73674.1\|2161359_2161797_-\|tail	phage minor tail protein L	Q6H9T5	Enterobacteria_phage	5.0e-63	100.0
QAV73675.1\|2161796_2162138_-\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	5.1e-63	100.0
QAV73676.1\|2162130_2165373_-\|tail	phage tail tape measure protein	A0A0P0ZDY0	Stx2-converting_phage	0.0e+00	100.0
QAV76736.1\|2165420_2165630_-	DUF4035 domain-containing protein	A0A0P0ZED8	Stx2-converting_phage	2.6e-33	100.0
QAV73677.1\|2165725_2166100_-\|tail	phage tail protein	A0A0P0ZE84	Stx2-converting_phage	1.7e-64	99.2
QAV73678.1\|2166105_2166822_-\|tail	phage tail protein	A0A0P0ZD29	Stx2-converting_phage	2.9e-129	100.0
QAV73679.1\|2166880_2167225_-	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
QAV73680.1\|2167221_2167668_-	HK97 gp10 family phage protein	A0A0P0ZCD2	Stx2-converting_phage	8.1e-77	100.0
QAV73681.1\|2167664_2168015_-\|head,tail	head-tail adaptor protein	A0A0P0ZCU6	Stx2-converting_phage	7.0e-60	100.0
QAV73682.1\|2168024_2168351_-\|head,tail	phage gp6-like head-tail connector protein	A0A0P0ZDA0	Stx2-converting_phage	9.2e-54	100.0
QAV73683.1\|2168347_2170933_-\|portal	phage portal protein	B6DZA1	Enterobacteria_phage	0.0e+00	98.6
QAV73684.1\|2170878_2171100_-	hypothetical protein	B6DZA0	Enterobacteria_phage	5.8e-36	100.0
QAV73685.1\|2171144_2173082_-\|capsid	phage major capsid protein	B6DZ99	Enterobacteria_phage	0.0e+00	100.0
QAV73686.1\|2173145_2174807_-\|terminase	terminase large subunit	A0A0P0ZD10	Stx2-converting_phage	0.0e+00	99.5
QAV73687.1\|2174803_2175367_-\|terminase	terminase small subunit	B6DZ97	Enterobacteria_phage	2.8e-90	99.5
QAV73688.1\|2175656_2176022_-	HNH endonuclease	B6DZ96	Enterobacteria_phage	1.5e-65	100.0
QAV73689.1\|2176063_2176291_+	DUF3950 domain-containing protein	A0A0P0ZE23	Stx2-converting_phage	1.7e-35	100.0
QAV73690.1\|2176715_2176901_-	hypothetical protein	A0A0P0ZCT3	Stx2-converting_phage	1.2e-18	100.0
QAV73691.1\|2177128_2177275_-	hypothetical protein	A0A0P0ZE99	Stx2-converting_phage	2.6e-16	100.0
QAV73692.1\|2177274_2177844_-	hypothetical protein	A0A1I9LJR6	Stx_converting_phage	3.1e-105	100.0
QAV73693.1\|2178114_2178648_-	lysozyme	B6DZ92	Enterobacteria_phage	3.5e-103	100.0
QAV76737.1\|2178698_2179043_-	DUF1327 domain-containing protein	B6DZ91	Enterobacteria_phage	4.5e-59	100.0
QAV73694.1\|2179047_2179254_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	4.0e-31	98.5
QAV73695.1\|2179702_2181553_-	DUF1737 domain-containing protein	B6DZ89	Enterobacteria_phage	0.0e+00	98.2
QAV73696.1\|2182031_2182460_-	tellurite resistance protein	H6WZJ6	Escherichia_phage	4.4e-64	97.8
QAV73697.1\|2182942_2183065_-	antiterminator	NA	NA	NA	NA
QAV73698.1\|2183095_2183785_-	antiterminator	I6PDF8	Cronobacter_phage	4.0e-59	51.1
QAV73699.1\|2183781_2184141_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	5.9e-38	67.5
QAV73700.1\|2184153_2185203_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	1.4e-108	53.7
QAV73701.1\|2185204_2185483_-	hypothetical protein	I6PCV7	Cronobacter_phage	5.7e-12	48.4
QAV73702.1\|2185650_2185863_-	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	3.1e-18	68.6
QAV73703.1\|2186051_2186156_-	hypothetical protein	NA	NA	NA	NA
QAV76738.1\|2186271_2186856_-	DUF551 domain-containing protein	A0A0P0ZD75	Stx2-converting_phage	1.9e-33	84.8
QAV73704.1\|2186912_2187308_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	7.8e-31	51.4
QAV73705.1\|2188118_2188859_-	DNA replication protein DnaC	A0A088CBP4	Shigella_phage	2.3e-124	89.8
QAV73706.1\|2188865_2189828_-	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	1.8e-81	57.0
QAV73707.1\|2189850_2190276_-	Rha family transcriptional regulator	NA	NA	NA	NA
QAV73708.1\|2190272_2190575_-	transcriptional regulator	K7PHA1	Enterobacteria_phage	8.6e-06	34.8

DBSCAN-SWA_7

2497522 : 2555263

Enterobacteria_phage(63.33%)

transposase,tail,tRNA,integrase

attL 2497366:2497381|attR 2555342:2555357

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2497366:2497381	attL	NA	NA	NA	NA
QAV73999.1\|2497522_2498494_+\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
QAV74000.1\|2498658_2501088_-	Trimethylamine-N-oxide reductase 2	NA	NA	NA	NA
QAV74001.1\|2501112_2502213_-	cytochrome c-type protein TorY	NA	NA	NA	NA
QAV74002.1\|2502600_2503347_-	copper homeostasis protein CutC	NA	NA	NA	NA
QAV74003.1\|2503360_2503927_-	VOC family protein	NA	NA	NA	NA
QAV74004.1\|2504142_2505876_+\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	4.0e-87	33.7
QAV74005.1\|2506052_2506541_+	lysozyme inhibitor LprI family protein	NA	NA	NA	NA
QAV76754.1\|2506660_2507053_-	flagellar protein FlhE	NA	NA	NA	NA
QAV74006.1\|2507052_2509131_-	flagellar biosynthesis protein FlhA	NA	NA	NA	NA
QAV74007.1\|2510472_2511117_-	protein phosphatase CheZ	NA	NA	NA	NA
QAV74008.1\|2511127_2511517_-	two-component system response regulator	A0A2K9L4R0	Tupanvirus	1.3e-06	32.0
QAV74009.1\|2511531_2512581_-	chemotaxis response regulator protein-glutamate methylesterase	Q56AR1	Bacillus_thuringiensis_phage	1.0e-05	32.8
QAV74010.1\|2512583_2513444_-	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
QAV74011.1\|2513462_2515064_-	methyl-accepting chemotaxis protein IV	A0A2H4J162	uncultured_Caudovirales_phage	5.4e-14	29.8
QAV74012.1\|2515109_2516771_-	methyl-accepting chemotaxis protein II	A0A2H4J162	uncultured_Caudovirales_phage	5.8e-11	38.4
QAV74013.1\|2516913_2517417_-	chemotaxis protein CheW	NA	NA	NA	NA
QAV74014.1\|2517437_2519402_-	chemotaxis protein CheA	NA	NA	NA	NA
QAV74015.1\|2519406_2520333_-	motility protein MotB	NA	NA	NA	NA
QAV74016.1\|2520329_2521217_-	flagellar motor stator protein MotA	NA	NA	NA	NA
QAV74017.1\|2521343_2521922_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
QAV74018.1\|2521924_2522275_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA
QAV74019.1\|2523054_2523483_+	universal stress protein UspC	NA	NA	NA	NA
QAV74020.1\|2523489_2524914_-	alpha,alpha-trehalose-phosphate synthase	NA	NA	NA	NA
QAV74021.1\|2524888_2525689_-	trehalose-phosphatase	NA	NA	NA	NA
QAV76755.1\|2525855_2526842_-	L-arabinose ABC transporter permease AraH	NA	NA	NA	NA
QAV74022.1\|2526856_2528371_-	L-arabinose ABC transporter ATP-binding protein AraG	A0A2H4PQG7	Staphylococcus_phage	4.3e-13	27.1
QAV74023.1\|2528440_2529430_-	arabinose ABC transporter substrate-binding protein	NA	NA	NA	NA
QAV74024.1\|2530226_2530730_+	non-heme ferritin-like protein	NA	NA	NA	NA
QAV74025.1\|2530809_2531061_-	DUF2766 domain-containing protein	NA	NA	NA	NA
QAV76756.1\|2531175_2531262_-	stress response protein AzuC	NA	NA	NA	NA
QAV74026.1\|2531523_2531847_+	hypothetical protein	NA	NA	NA	NA
QAV74027.1\|2532017_2532515_+	non-heme ferritin	NA	NA	NA	NA
QAV74028.1\|2532551_2532791_-	DUF2492 family protein	NA	NA	NA	NA
QAV74029.1\|2532982_2534194_+	tyrosine transporter TyrP	NA	NA	NA	NA
QAV74030.1\|2534255_2534921_-	YecA family protein	NA	NA	NA	NA
QAV74031.1\|2535277_2536279_-\|integrase	integrase	Q94N03	Haemophilus_virus	3.5e-104	59.1
QAV74032.1\|2536284_2536632_-	DUF2511 domain-containing protein	NA	NA	NA	NA
QAV74033.1\|2536661_2537312_-	hypothetical protein	NA	NA	NA	NA
QAV74034.1\|2537327_2537732_-	transcriptional regulator	Q6QID2	Burkholderia_phage	2.7e-23	53.8
QAV74035.1\|2537821_2537959_-	hypothetical protein	NA	NA	NA	NA
QAV74036.1\|2538030_2538234_+	DNA-binding protein	P79674	Haemophilus_phage	3.1e-07	45.2
QAV74037.1\|2538255_2538606_+	DUF4761 family protein	A0A0A7NV42	Enterobacteria_phage	8.6e-50	81.9
QAV74038.1\|2538616_2538895_+	hypothetical protein	A0A0A7NRX5	Enterobacteria_phage	4.8e-35	80.4
QAV74039.1\|2538906_2539149_+	DUF4754 domain-containing protein	A0A0A7NQ71	Enterobacteria_phage	1.2e-37	98.8
QAV74040.1\|2539145_2539259_+	hypothetical protein	A0A0A7NPW7	Enterobacteria_phage	6.2e-10	100.0
QAV74041.1\|2539351_2539768_+	hypothetical protein	NA	NA	NA	NA
QAV74042.1\|2539791_2539995_+	hypothetical protein	A0A0A7NPS8	Enterobacteria_phage	2.5e-25	83.6
QAV74043.1\|2539991_2540258_+	MarR family transcriptional regulator	A0A0A7NV47	Enterobacteria_phage	3.1e-31	77.3
QAV74044.1\|2540254_2540554_+	hypothetical protein	A0A0A7NRX6	Enterobacteria_phage	1.6e-41	89.9
QAV74045.1\|2540876_2541107_+	derepression protein	A0A0A7NV48	Enterobacteria_phage	5.9e-31	94.7
QAV74046.1\|2541179_2541545_+	hypothetical protein	A0A0A7NRY1	Enterobacteria_phage	6.6e-61	96.7
QAV74047.1\|2541551_2544374_+	replication endonuclease	A0A0A7NQ77	Enterobacteria_phage	0.0e+00	97.7
QAV74048.1\|2544450_2545410_+	recombinase	A0A0A7NPX4	Enterobacteria_phage	1.2e-178	99.1
QAV74049.1\|2545414_2545729_+	peptide transporter	A0A0A7NPT5	Enterobacteria_phage	1.1e-19	52.9
QAV74050.1\|2546934_2547351_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	3.6e-63	84.7
QAV74051.1\|2547394_2547967_-	serine acetyltransferase	A0A1L2JYI5	Streptococcus_phage	1.0e-07	34.4
QAV74052.1\|2548123_2548612_-\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	1.0e-85	100.0
QAV74053.1\|2551414_2551543_-\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	3.0e-16	97.6
QAV74054.1\|2551578_2551944_-\|tail	phage tail protein	A0A0A7NPZ0	Enterobacteria_phage	1.7e-56	98.3
QAV74055.1\|2551998_2552511_-\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	2.1e-92	99.4
QAV74056.1\|2552510_2553695_-\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	1.7e-219	96.7
QAV74057.1\|2553852_2554176_+	phage late control D family protein	A0A0A7NQ97	Enterobacteria_phage	2.1e-42	97.8
QAV74058.1\|2554126_2555263_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
2555342:2555357	attR	NA	NA	NA	NA

DBSCAN-SWA_8

2579166 : 2654017

Escherichia_phage(31.25%)

capsid,holin,head,tail,portal,terminase,transposase,integrase

attL 2579639:2579653|attR 2658590:2658604

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAV76759.1\|2579166_2579418_+\|integrase	integrase	S4TSP2	Salmonella_phage	6.5e-07	52.3
QAV74085.1\|2579337_2579652_-	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA
2579639:2579653	attL	NA	NA	NA	NA
QAV74086.1\|2579866_2581525_+	flagellar basal body M-ring protein FliF	NA	NA	NA	NA
QAV74087.1\|2581517_2582513_+	flagellar motor switch protein FliG	NA	NA	NA	NA
QAV74088.1\|2582505_2583192_+	flagellar assembly protein FliH	NA	NA	NA	NA
QAV76760.1\|2583253_2584627_+	flagellum-specific ATP synthase FliI	NA	NA	NA	NA
QAV74089.1\|2584645_2585089_+	flagella biosynthesis chaperone FliJ	NA	NA	NA	NA
QAV74090.1\|2585085_2586213_+	flagellar hook length control protein FliK	NA	NA	NA	NA
QAV74091.1\|2586317_2586782_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA
QAV74092.1\|2586786_2587791_+	flagellar motor switch protein FliM	NA	NA	NA	NA
QAV74093.1\|2587787_2588201_+	flagellar motor switch protein FliN	NA	NA	NA	NA
QAV76761.1\|2588203_2588569_+	flagellar type III secretion system protein FliO	NA	NA	NA	NA
QAV74094.1\|2588568_2589306_+	flagellar biosynthesis protein FliP	NA	NA	NA	NA
QAV74095.1\|2589315_2589585_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA
QAV74096.1\|2589592_2590378_+	flagellar type III secretion system protein FliR	NA	NA	NA	NA
QAV74097.1\|2590667_2591291_+	transcriptional regulator RcsA	NA	NA	NA	NA
QAV74098.1\|2591334_2591577_-	protein DsrB	NA	NA	NA	NA
QAV74099.1\|2591509_2591698_-	hypothetical protein	NA	NA	NA	NA
QAV76762.1\|2591685_2591913_+	stress-induced protein YodD	NA	NA	NA	NA
QAV74100.1\|2592210_2593026_+	mannosyl-3-phosphoglycerate phosphatase-related protein	NA	NA	NA	NA
QAV74101.1\|2593022_2594717_-	cellulose biosynthesis regulator YedQ	A0A127AWB9	Bacillus_phage	1.3e-18	35.6
QAV74102.1\|2594887_2595070_-	DUF2158 domain-containing protein	NA	NA	NA	NA
QAV74103.1\|2595148_2596066_-	DUF808 domain-containing protein	NA	NA	NA	NA
QAV74104.1\|2596238_2597159_+	drug/metabolite exporter YedA	NA	NA	NA	NA
QAV74105.1\|2597147_2597618_-	very short patch repair endonuclease	E5E3X5	Burkholderia_phage	2.0e-33	47.6
QAV74106.1\|2597598_2599017_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	3.0e-101	54.8
QAV74107.1\|2599083_2599779_-	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	3.6e-07	28.0
QAV74108.1\|2602531_2603383_+	protein deglycase HchA	NA	NA	NA	NA
QAV74109.1\|2603490_2604849_-	heavy metal sensor histidine kinase	NA	NA	NA	NA
QAV76763.1\|2604848_2605520_-	DNA-binding response regulator HprR	W8CYM9	Bacillus_phage	5.4e-32	35.2
QAV74110.1\|2605652_2606066_+	hydroxyisourate hydrolase	NA	NA	NA	NA
QAV74111.1\|2606173_2607178_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
QAV74112.1\|2607178_2607814_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
QAV74113.1\|2608049_2608721_+	metal-binding protein ZinT	NA	NA	NA	NA
QAV74114.1\|2609063_2609594_+	cytochrome b	A0A0U2QLA7	Escherichia_phage	5.5e-56	99.1
QAV74115.1\|2610163_2610523_+	hypothetical protein	NA	NA	NA	NA
QAV74116.1\|2610730_2611384_+	type III secretion system effector ADP-ribosyltransferase EspJ	NA	NA	NA	NA
QAV74117.1\|2611708_2612722_+	Tir-cytoskeleton coupling protein TccP	NA	NA	NA	NA
QAV74118.1\|2612847_2613117_-\|tail	phage tail protein	B6DZB8	Enterobacteria_phage	3.8e-45	100.0
QAV74119.1\|2613118_2614288_-\|tail	phage tail protein	B6DZB7	Enterobacteria_phage	1.1e-83	96.9
QAV74120.1\|2614352_2614952_-	outer membrane protein	A0A0P0ZE39	Stx2-converting_phage	1.2e-110	100.0
QAV76764.1\|2615019_2617533_-	host specificity protein J	B6DZB5	Enterobacteria_phage	0.0e+00	99.6
QAV76765.1\|2618733_2619366_-\|tail	tail assembly protein	B6ETG3	Enterobacteria_phage	1.7e-104	99.0
QAV74121.1\|2619311_2620055_-\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	6.1e-146	96.4
QAV74122.1\|2620065_2620764_-\|tail	phage minor tail protein L	A0A0P0ZBE3	Stx2-converting_phage	1.2e-130	97.8
QAV74123.1\|2620763_2621093_-\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
QAV74124.1\|2621089_2623669_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	79.9
QAV74125.1\|2623649_2624063_-\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	1.6e-42	82.2
QAV74126.1\|2624089_2624521_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.4e-41	68.1
QAV74127.1\|2624534_2625275_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	3.6e-130	98.0
QAV74128.1\|2625256_2625523_-\|capsid	major capsid protein E	NA	NA	NA	NA
QAV74129.1\|2625580_2625928_-\|head	head decoration protein	C6ZCY1	Enterobacteria_phage	2.6e-22	58.1
QAV74130.1\|2625964_2627470_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.2e-100	54.2
QAV74131.1\|2627459_2629052_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	8.7e-182	60.5
QAV74132.1\|2629048_2629255_-\|tail	phage tail protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
QAV74133.1\|2631139_2631649_-\|terminase	terminase	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
QAV74134.1\|2632043_2632268_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	4.1e-21	92.7
QAV74135.1\|2632349_2632664_-	PerC family transcriptional regulator	NA	NA	NA	NA
QAV74136.1\|2633190_2633376_-	hypothetical protein	A0A1U9AJA4	Stx1_converting_phage	1.7e-20	80.3
QAV74137.1\|2633603_2633735_-	hypothetical protein	A0A0N7BYT9	Escherichia_phage	9.4e-10	88.4
QAV74138.1\|2633747_2633930_-	hypothetical protein	NA	NA	NA	NA
QAV74139.1\|2634085_2634619_-	lysozyme	A0A0N7KZF9	Stx2-converting_phage	1.4e-99	97.7
QAV74140.1\|2634669_2635014_-	DUF1327 domain-containing protein	B6DZ91	Enterobacteria_phage	1.7e-58	99.1
QAV74141.1\|2635018_2635225_-\|holin	holin	Q6H9V8	Enterobacteria_phage	2.4e-31	100.0
QAV74142.1\|2635544_2636757_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
QAV74143.1\|2636839_2638690_-	DUF1737 domain-containing protein	B6DZ89	Enterobacteria_phage	0.0e+00	96.4
QAV74144.1\|2640076_2640199_-	antiterminator	NA	NA	NA	NA
QAV74145.1\|2640229_2640919_-	antiterminator	I6PDF8	Cronobacter_phage	1.5e-58	51.1
QAV74146.1\|2640915_2641275_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.5e-36	64.9
QAV74147.1\|2641287_2642337_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	1.3e-109	54.9
QAV74148.1\|2642338_2642617_-	hypothetical protein	I6PCV7	Cronobacter_phage	1.3e-11	48.4
QAV74149.1\|2642557_2642743_+	hypothetical protein	NA	NA	NA	NA
QAV74150.1\|2642784_2642997_-	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	7.6e-25	90.0
QAV74151.1\|2643183_2643288_-	hypothetical protein	NA	NA	NA	NA
QAV74152.1\|2643397_2643970_-	hypothetical protein	H6WZG0	Escherichia_phage	2.5e-46	92.2
QAV74153.1\|2644096_2644408_-	hypothetical protein	A0A222YY67	Escherichia_phage	2.4e-51	83.5
QAV76766.1\|2644404_2644557_-	hypothetical protein	NA	NA	NA	NA
QAV74154.1\|2644589_2644946_-	eae-like protein	A0A222YY85	Escherichia_phage	3.1e-15	65.8
QAV74155.1\|2644942_2645167_-	hypothetical protein	A0A1B5FPG2	Escherichia_phage	3.6e-09	42.3
QAV74156.1\|2645188_2645887_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.6e-71	59.5
QAV76767.1\|2645921_2646344_-	replication protein	A0A0U2JGJ0	Escherichia_phage	5.0e-76	96.4
QAV74157.1\|2646375_2647413_-	phage replisome organizer	A0A0U2RT81	Escherichia_phage	1.1e-87	68.3
QAV74158.1\|2647481_2647907_-	Rha family transcriptional regulator	NA	NA	NA	NA
QAV74159.1\|2647903_2648131_-	cell division protein	NA	NA	NA	NA
QAV76768.1\|2648228_2648873_+	LexA family transcriptional regulator	A0A1P8DTH0	Proteus_phage	2.8e-06	24.9
QAV74160.1\|2649147_2649300_+	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	8.7e-07	53.2
QAV74161.1\|2649780_2649969_+	cell division inhibitor	NA	NA	NA	NA
QAV74162.1\|2649965_2650154_+	DUF1482 family protein	NA	NA	NA	NA
QAV74163.1\|2650249_2652721_+	exonuclease	A0A192Y6E0	Salmonella_phage	8.8e-56	56.6
QAV74164.1\|2652779_2652983_+	DUF4224 domain-containing protein	NA	NA	NA	NA
QAV74165.1\|2652982_2654017_+\|integrase	integrase	A0A192Y7M7	Salmonella_phage	2.1e-99	57.4
2658590:2658604	attR	NA	NA	NA	NA

DBSCAN-SWA_9

2812054 : 2925285

145

Enterobacteria_phage(33.63%)

protease,capsid,holin,head,tail,tRNA,portal,plate,terminase,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAV74298.1\|2812054_2814088_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.4e-54	27.6
QAV74299.1\|2818050_2819331_+	WGR domain-containing protein	NA	NA	NA	NA
QAV74300.1\|2820703_2821234_-	hypothetical protein	A0A2D1GNR8	Pseudomonas_phage	3.7e-36	62.4
QAV74301.1\|2821424_2821673_+	transcriptional regulator	A0A2D1GNH1	Pseudomonas_phage	1.3e-28	73.2
QAV74302.1\|2821674_2823765_+\|transposase	transposase	A0A2D1GNK9	Pseudomonas_phage	8.8e-166	45.4
QAV74303.1\|2823835_2824768_+	transcriptional regulator	A0A0C4UQR3	Shigella_phage	1.2e-69	48.3
QAV74304.1\|2824770_2824992_+	hypothetical protein	NA	NA	NA	NA
QAV74305.1\|2825004_2825259_+	hypothetical protein	NA	NA	NA	NA
QAV74306.1\|2825260_2825542_+	host nuclease inhibitor protein	I6WB15	Burkholderia_virus	2.8e-11	47.4
QAV74307.1\|2825538_2825811_+	hypothetical protein	NA	NA	NA	NA
QAV74308.1\|2825815_2826109_+	hypothetical protein	NA	NA	NA	NA
QAV74309.1\|2826120_2826651_+	host-nuclease inhibitor protein Gam	C9DGL8	Escherichia_phage	1.9e-48	57.1
QAV74310.1\|2826748_2827291_+	hypothetical protein	A0A0C4UQZ6	Shigella_phage	2.9e-28	40.0
QAV74311.1\|2827294_2827828_+	hypothetical protein	A0A0C4UQU2	Shigella_phage	9.1e-67	66.7
QAV74312.1\|2827827_2828343_+	hypothetical protein	C9DGM0	Escherichia_phage	5.5e-45	53.6
QAV74313.1\|2828346_2828898_+	AsnC family protein	NA	NA	NA	NA
QAV74314.1\|2828894_2829080_+	hypothetical protein	NA	NA	NA	NA
QAV74315.1\|2829118_2829451_+	hypothetical protein	NA	NA	NA	NA
QAV74316.1\|2829443_2829641_+	hypothetical protein	A0A291AXE7	Shigella_phage	1.2e-05	34.5
QAV74317.1\|2829630_2829927_+	hypothetical protein	NA	NA	NA	NA
QAV74318.1\|2829923_2830433_+	DUF1018 domain-containing protein	A0A0C4UQU3	Shigella_phage	6.7e-27	42.4
QAV74319.1\|2830502_2830928_+	transcriptional regulator	NA	NA	NA	NA
QAV74320.1\|2830999_2831500_+	lysozyme	B6SD29	Bacteriophage	3.0e-27	42.6
QAV74321.1\|2831534_2831963_+	hypothetical protein	NA	NA	NA	NA
QAV76779.1\|2831946_2832165_+	hypothetical protein	NA	NA	NA	NA
QAV74322.1\|2832174_2832402_+	TraR/DksA family transcriptional regulator	NA	NA	NA	NA
QAV74323.1\|2832382_2832691_+	DUF2730 family protein	NA	NA	NA	NA
QAV74324.1\|2832687_2832978_+	ArsR family transcriptional regulator	A0A0C4UR00	Shigella_phage	1.0e-24	62.1
QAV74325.1\|2832980_2833562_+	DUF3486 family protein	A0A0C4UQU5	Shigella_phage	1.9e-49	57.0
QAV74326.1\|2833561_2835226_+	hypothetical protein	A0A0C4UR29	Shigella_phage	1.4e-230	73.2
QAV74327.1\|2835225_2836815_+	DUF935 domain-containing protein	A0A0C4UQR8	Shigella_phage	1.9e-168	57.9
QAV74328.1\|2836798_2838124_+\|head	phage head morphogenesis protein	A0A0C4UQY9	Shigella_phage	6.4e-154	59.7
QAV74329.1\|2838242_2838716_+	phage virion morphogenesis protein	A0A0C4UR01	Shigella_phage	5.1e-37	53.9
QAV74330.1\|2838892_2840017_+\|protease	protease	A0A0C4UQU6	Shigella_phage	2.2e-78	47.6
QAV74331.1\|2840016_2840964_+\|head	head protein	A0A0C4UQR9	Shigella_phage	1.2e-122	67.2
QAV74332.1\|2841007_2841412_+	hypothetical protein	NA	NA	NA	NA
QAV74333.1\|2841408_2841828_+	DUF1320 domain-containing protein	A0A0C4UR02	Shigella_phage	1.4e-33	53.6
QAV74334.1\|2841824_2842385_+	DUF1834 family protein	A0A0C4UQU7	Shigella_phage	1.1e-41	47.7
QAV74335.1\|2842385_2842631_+	DUF2635 domain-containing protein	C9DGP6	Escherichia_phage	2.8e-07	54.5
QAV74336.1\|2842627_2844130_+\|tail	phage tail protein	C9DGP7	Escherichia_phage	5.6e-138	51.3
QAV74337.1\|2844138_2844504_+\|tail	phage tail protein	C9DGP8	Escherichia_phage	2.0e-25	51.7
QAV74338.1\|2844518_2844995_+	hypothetical protein	A0A0C4UR03	Shigella_phage	1.0e-21	50.8
QAV74339.1\|2844936_2845119_+	hypothetical protein	C9DGQ0	Escherichia_phage	3.2e-08	54.8
QAV74340.1\|2845121_2847197_+\|tail	tail tape measure protein	A0A0C4UQU8	Shigella_phage	2.1e-71	37.7
QAV76780.1\|2847183_2848533_+	multidrug DMT transporter permease	C9DGQ2	Escherichia_phage	7.7e-54	33.1
QAV74341.1\|2848516_2849641_+\|tail	phage tail protein	C9DGQ3	Escherichia_phage	2.9e-91	48.5
QAV74342.1\|2849630_2850245_+\|plate	phage baseplate assembly protein V	A0A0C4UQZ3	Shigella_phage	4.7e-51	51.0
QAV74343.1\|2850237_2850675_+	hypothetical protein	A0A0C4UR04	Shigella_phage	1.9e-38	53.5
QAV76781.1\|2850674_2851757_+\|plate	baseplate J/gp47 family protein	A0A0C4UQU9	Shigella_phage	1.1e-98	53.2
QAV74344.1\|2851747_2852308_+	DUF2313 domain-containing protein	C9DGQ7	Escherichia_phage	2.3e-44	48.1
QAV74345.1\|2852307_2853219_+\|tail	phage tail protein	C9DGQ8	Escherichia_phage	2.9e-36	47.5
QAV74346.1\|2853253_2853775_-\|tail	phage tail protein	A0A0U2QV64	Escherichia_phage	2.1e-47	52.6
QAV74347.1\|2853854_2854058_-\|tail	phage tail protein	NA	NA	NA	NA
QAV74348.1\|2854280_2854841_+	recombinase family protein	A0A0C4UR34	Shigella_phage	4.3e-75	75.7
QAV74349.1\|2856578_2858117_-\|transposase	IS66-like element ISEc8 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.5e-300	100.0
QAV74350.1\|2858166_2858514_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
QAV74351.1\|2858510_2858891_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
QAV76782.1\|2859163_2859430_+	hypothetical protein	Q5MBW4	Stx1-converting_phage	8.6e-34	82.8
QAV74352.1\|2859576_2859759_+	DUF1378 family protein	S5MBZ5	Escherichia_phage	1.3e-09	54.4
QAV74353.1\|2859794_2860040_+	DUF826 domain-containing protein	NA	NA	NA	NA
QAV74354.1\|2860078_2860543_-	hypothetical protein	NA	NA	NA	NA
QAV74355.1\|2860657_2860858_+	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
QAV74356.1\|2860811_2861549_+	protein mom	A0A0C4UQZ7	Shigella_phage	1.7e-103	79.0
QAV74357.1\|2862272_2865902_+	DUF4132 domain-containing protein	NA	NA	NA	NA
QAV74358.1\|2865963_2866281_+	hypothetical protein	NA	NA	NA	NA
QAV74359.1\|2867521_2868610_+	MoxR family ATPase	NA	NA	NA	NA
QAV74360.1\|2868620_2870150_+	hypothetical protein	NA	NA	NA	NA
QAV74361.1\|2870168_2870900_+	hypothetical protein	NA	NA	NA	NA
QAV74362.1\|2870892_2872029_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	1.9e-167	100.0
QAV74363.1\|2872025_2874029_+	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	100.0
QAV74364.1\|2874153_2874615_+	DUF1307 domain-containing protein	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
QAV74365.1\|2874656_2875127_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
QAV74366.1\|2875173_2875893_-	two-component system response regulator BtsR	NA	NA	NA	NA
QAV74367.1\|2875889_2877575_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	1.7e-305	100.0
QAV74368.1\|2878089_2878338_+	DNA damage-inducible protein DinI	B6DZC1	Enterobacteria_phage	1.4e-38	100.0
QAV74369.1\|2878334_2878469_-\|capsid	capsid protein	NA	NA	NA	NA
QAV74370.1\|2878499_2879141_-	DUF1076 domain-containing protein	B6DZC0	Enterobacteria_phage	6.8e-109	100.0
QAV74371.1\|2879222_2879624_-	DUF1076 domain-containing protein	B6DZB9	Enterobacteria_phage	2.2e-73	99.2
QAV74372.1\|2879799_2880069_-\|tail	phage tail protein	B6DZB8	Enterobacteria_phage	3.8e-45	100.0
QAV74373.1\|2880070_2881240_-\|tail	phage tail protein	B6DZB7	Enterobacteria_phage	1.1e-83	96.9
QAV74374.1\|2881304_2881904_-	outer membrane protein	A0A0P0ZE39	Stx2-converting_phage	1.2e-110	100.0
QAV76783.1\|2881971_2884485_-	host specificity protein J	B6DZB5	Enterobacteria_phage	0.0e+00	99.6
QAV76784.1\|2885685_2886318_-\|tail	tail assembly protein	B6ETG3	Enterobacteria_phage	1.7e-104	99.0
QAV74375.1\|2886263_2887007_-\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	6.1e-146	96.4
QAV74376.1\|2887017_2887716_-\|tail	phage minor tail protein L	A0A0P0ZBE3	Stx2-converting_phage	1.2e-130	97.8
QAV74377.1\|2887715_2888045_-\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
QAV74378.1\|2888041_2890687_-\|tail	phage tail tape measure protein	Q687F3	Enterobacteria_phage	0.0e+00	99.7
QAV74379.1\|2890730_2891039_-\|tail	phage tail assembly protein T	Q687F4	Enterobacteria_phage	1.3e-54	100.0
QAV74380.1\|2891065_2891488_-\|tail	phage minor tail protein G	Q687F5	Enterobacteria_phage	2.2e-71	97.9
QAV74381.1\|2891501_2892254_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	2.9e-135	99.6
QAV74382.1\|2892261_2892660_-\|tail	phage tail protein	Q9EYD7	Enterobacteria_phage	5.9e-71	100.0
QAV74383.1\|2892672_2893296_-\|tail	phage tail protein	Q9EYD6	Enterobacteria_phage	6.6e-101	100.0
QAV74384.1\|2893298_2893580_-	DNA breaking-rejoining protein	Q8VNN4	Enterobacteria_phage	3.9e-45	97.8
QAV74385.1\|2893572_2893899_-	DUF2190 family protein	Q9EYD5	Enterobacteria_phage	6.1e-50	100.0
QAV74386.1\|2893986_2896011_-\|protease	Clp protease ClpP	S5M7Q8	Escherichia_phage	0.0e+00	99.7
QAV74387.1\|2895955_2897458_-\|portal	phage portal protein	S5MW34	Escherichia_phage	6.3e-291	100.0
QAV74388.1\|2897457_2897670_-	hypothetical protein	S5MBY8	Escherichia_phage	3.0e-29	98.6
QAV74389.1\|2897666_2899790_-\|terminase	phage terminase large subunit family protein	S5MDQ1	Escherichia_phage	0.0e+00	99.0
QAV74390.1\|2899786_2900263_-	DUF1441 family protein	Q9EYD0	Enterobacteria_phage	2.1e-83	100.0
QAV74391.1\|2900780_2900966_-	hypothetical protein	A0A0P0ZCT3	Stx2-converting_phage	1.2e-18	100.0
QAV74392.1\|2901193_2901340_-	hypothetical protein	A0A0P0ZE99	Stx2-converting_phage	2.6e-16	100.0
QAV74393.1\|2901339_2901909_-	hypothetical protein	A0A1I9LJR6	Stx_converting_phage	3.1e-105	100.0
QAV74394.1\|2902179_2902713_-	lysozyme	A0A1I9LJR4	Stx_converting_phage	1.8e-102	100.0
QAV74395.1\|2902717_2902933_-\|holin	holin	Q9ZWW2	Enterobacteria_phage	6.9e-34	100.0
QAV74396.1\|2903010_2903256_-	DUF826 domain-containing protein	A0A0P0ZGR2	Escherichia_phage	8.8e-17	100.0
QAV74397.1\|2903296_2903476_-	DUF1378 family protein	A0A2R2Z345	Escherichia_phage	2.2e-25	100.0
QAV74398.1\|2903613_2905560_-	DUF1737 domain-containing protein	A0A075M342	Escherichia_Stx1-converting_recombinant_phage	0.0e+00	98.1
QAV74399.1\|2906363_2906516_-	DNA methylase	A0A2R2Z327	Escherichia_phage	4.0e-20	100.0
QAV74400.1\|2906530_2906776_+	hypothetical protein	A0A0P0ZGS0	Escherichia_phage	5.0e-36	100.0
QAV74401.1\|2906764_2907199_-	antitermination protein	G9L695	Escherichia_phage	1.3e-79	97.2
QAV74402.1\|2907284_2907425_-	YlcG family protein	K7PHH3	Enterobacteria_phage	1.1e-08	69.8
QAV74403.1\|2907421_2907784_-	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	4.3e-60	96.5
QAV74404.1\|2907780_2908071_-	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	2.8e-46	92.7
QAV74405.1\|2908063_2908234_-	hypothetical protein	K7P7K0	Enterobacteria_phage	5.3e-13	67.9
QAV74406.1\|2908233_2908689_-	DNA base-flipping protein YbcN	I6PD71	Cronobacter_phage	5.9e-59	66.2
QAV74407.1\|2908685_2908787_-	hypothetical protein	NA	NA	NA	NA
QAV74408.1\|2908877_2909159_-	hypothetical protein	NA	NA	NA	NA
QAV76785.1\|2909202_2909400_-	hypothetical protein	NA	NA	NA	NA
QAV74409.1\|2909627_2909912_-	protein ren	A0A0P0ZCJ0	Stx2-converting_phage	3.7e-43	96.7
QAV74410.1\|2909908_2910610_-	Replication protein P	Q9EYB6	Enterobacteria_phage	5.8e-130	100.0
QAV76786.1\|2910606_2911536_-	Replication protein O	A0A0M5M7Y1	Salmonella_phage	8.9e-110	63.8
QAV74411.1\|2911622_2912162_-	regulator	M9NZI6	Enterobacteria_phage	2.6e-61	66.1
QAV74412.1\|2912525_2913218_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	2.5e-109	86.1
QAV74413.1\|2913324_2914932_+	hypothetical protein	A0A1S5SA14	Streptococcus_phage	6.9e-94	49.0
QAV74414.1\|2915435_2915726_+	hypothetical protein	K7P6H3	Enterobacteria_phage	5.0e-27	85.1
QAV74415.1\|2915801_2916098_+	host-nuclease inhibitor protein Gam	Q9EYA6	Enterobacteria_phage	4.3e-50	100.0
QAV74416.1\|2916103_2916889_+	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
QAV74417.1\|2916885_2917563_+	exonuclease	A0A1I9LJM9	Stx_converting_phage	6.0e-132	99.6
QAV74418.1\|2917562_2917745_+	DUF1317 family protein	A0A0P0ZAS9	Stx2-converting_phage	1.6e-28	98.3
QAV74419.1\|2917717_2917909_+	DUF1382 family protein	A0A1I9LJM8	Stx_converting_phage	1.9e-27	100.0
QAV74420.1\|2917919_2918201_+	cell division protein ZapA	A0A0P0ZBQ0	Stx2-converting_phage	1.9e-47	100.0
QAV74421.1\|2918299_2918521_+	TraR/DksA family transcriptional regulator	A0A1I9LJM6	Stx_converting_phage	2.9e-35	100.0
QAV74422.1\|2918517_2919465_+	ead/Ea22-like family protein	A0A0P0ZE96	Stx2-converting_phage	3.6e-183	100.0
QAV74423.1\|2919466_2919643_+	hypothetical protein	B6DZ55	Enterobacteria_phage	4.6e-28	100.0
QAV74424.1\|2919612_2919900_+	hypothetical protein	NA	NA	NA	NA
QAV74425.1\|2919976_2920333_+	hypothetical protein	A0A0N7KZJ2	Stx2-converting_phage	3.1e-63	100.0
QAV74426.1\|2920329_2920692_+	DUF551 domain-containing protein	Q9EY98	Enterobacteria_phage	1.8e-71	100.0
QAV74427.1\|2920779_2921022_+	DUF4222 domain-containing protein	B6DZ51	Enterobacteria_phage	1.5e-37	100.0
QAV74428.1\|2921025_2921160_+	hypothetical protein	A0A0P0ZDP5	Stx2-converting_phage	4.9e-22	100.0
QAV74429.1\|2921178_2921433_+	excisionase	Q859D3	Escherichia_coli_phage	3.0e-44	100.0
QAV74430.1\|2921466_2922753_+	DUF3596 domain-containing protein	Q9EY96	Enterobacteria_phage	7.6e-253	100.0
QAV74431.1\|2922773_2923475_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.6e-103	100.0
QAV74432.1\|2923534_2923642_+	protein YohO	NA	NA	NA	NA
QAV74433.1\|2923622_2924354_-	ABC transporter permease	NA	NA	NA	NA
QAV74434.1\|2924358_2925285_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.8e-23	30.8

DBSCAN-SWA_10

3169564 : 3174951

Enterobacteria_phage(50.0%)

integrase

attL 3160015:3160031|attR 3171979:3171995

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3160015:3160031	attL	NA	NA	NA	NA
QAV74638.1\|3169564_3170497_+	transporter	E7DYY8	Enterobacteria_phage	1.2e-167	100.0
QAV76793.1\|3170808_3171966_+\|integrase	prophage integrase IntS	E7DYQ6	Enterobacteria_phage	2.2e-222	100.0
QAV74639.1\|3172140_3173277_-	acyltransferase	Q716G3	Shigella_phage	1.4e-80	72.8
3171979:3171995	attR	NA	NA	NA	NA
QAV74640.1\|3173286_3173967_-	DNA transfer protein	G5DA80	Enterobacteria_phage	1.8e-59	71.0
QAV74641.1\|3173953_3174421_-	DUF2824 family protein	Q2A0B3	Sodalis_phage	1.7e-64	74.7
QAV76794.1\|3174420_3174951_-	hypothetical protein	Q716G6	Shigella_phage	5.7e-69	99.3

DBSCAN-SWA_11

3453886 : 3467323

Enterobacteria_phage(40.0%)

tail,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAV74882.1\|3453886_3454369_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	4.0e-29	46.8
QAV74883.1\|3455214_3455463_+	DNA damage-inducible protein DinI	A5LH55	Enterobacteria_phage	3.1e-38	98.8
QAV74884.1\|3455858_3455978_+	ferredoxin	NA	NA	NA	NA
QAV74885.1\|3455964_3456555_-	bfpT-regulated chaperone	NA	NA	NA	NA
QAV74886.1\|3456737_3457388_+	DUF1076 domain-containing protein	B6DZZ5	Stx2-converting_phage	2.8e-25	37.2
QAV74887.1\|3457466_3458525_+	type III effector	NA	NA	NA	NA
QAV74888.1\|3458654_3459077_-	DUF1076 domain-containing protein	B6DZB9	Enterobacteria_phage	5.7e-72	97.0
QAV74889.1\|3459237_3459507_-\|tail	phage tail protein	B6DZB8	Enterobacteria_phage	3.8e-45	100.0
QAV74890.1\|3459508_3460075_-	hypothetical protein	A0A0P0ZBS5	Stx2-converting_phage	7.9e-69	99.3
QAV74891.1\|3460124_3460472_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
QAV74892.1\|3460468_3460849_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
QAV74893.1\|3460924_3461155_-	lysozyme	B6DZ92	Enterobacteria_phage	2.8e-33	97.3
QAV76803.1\|3461205_3461550_-	DUF1327 domain-containing protein	A0A0P0ZD64	Stx2-converting_phage	1.7e-58	99.1
QAV74894.1\|3461554_3461770_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	4.5e-33	98.6
QAV74895.1\|3461919_3463773_-	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	0.0e+00	97.9
QAV74896.1\|3464180_3464348_-	DUF3927 domain-containing protein	NA	NA	NA	NA
QAV74897.1\|3464433_3465177_-	hypothetical protein	NA	NA	NA	NA
QAV74898.1\|3465429_3466053_-	antitermination protein	K7PM87	Enterobacteria_phage	2.2e-112	98.1
QAV74899.1\|3466049_3466715_-	serine/threonine protein phosphatase	Q5TJL8	Enterobacteria_phage	5.0e-131	99.5
QAV74900.1\|3466711_3467323_-	recombination protein NinG	A0A1U9AJF8	Stx1_converting_phage	2.5e-92	95.6

DBSCAN-SWA_12

5054093 : 5071208

Stx2-converting_phage(38.89%)

transposase,integrase,tRNA,tail

attL 5055374:5055389|attR 5075353:5075368

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAV76866.1\|5054093_5054627_+	hypothetical protein	K7PKJ4	Enterobacteria_phage	1.1e-99	100.0
QAV76293.1\|5055044_5055326_-	pyocin activator protein PrtN	K7PGU0	Enterobacteria_phage	8.7e-45	98.9
5055374:5055389	attL	NA	NA	NA	NA
QAV76294.1\|5055670_5055868_-	hypothetical protein	K7PH57	Enterobacteria_phage	7.5e-11	68.6
QAV76295.1\|5056014_5056194_-	methyltransferase	H9C170	Pectobacterium_phage	1.2e-20	76.3
QAV76296.1\|5056203_5056488_-	class I SAM-dependent methyltransferase	I6S1S6	Salmonella_phage	1.3e-40	83.9
QAV76297.1\|5056484_5056835_-	Eae protein	A0A0P0ZBF8	Stx2-converting_phage	1.6e-56	94.8
QAV76298.1\|5057304_5058843_-\|transposase	IS66-like element ISEc8 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.5e-300	100.0
QAV76299.1\|5058892_5059240_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
QAV76300.1\|5059236_5059617_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
QAV76301.1\|5061133_5061733_+	Ail/Lom family protein	A0A0P0ZE39	Stx2-converting_phage	5.7e-110	99.0
QAV76302.1\|5061797_5063111_+\|tail	phage tail protein	A0A0P0ZE15	Stx2-converting_phage	2.5e-81	98.2
QAV76303.1\|5063112_5063382_+\|tail	phage tail protein	A0A0P0ZEF0	Stx2-converting_phage	2.7e-43	96.6
QAV76304.1\|5063493_5064066_+	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	2.5e-46	53.2
QAV76305.1\|5064138_5064768_+	DUF1076 domain-containing protein	B6DZB9	Enterobacteria_phage	1.4e-79	93.5
QAV76306.1\|5064849_5065491_+	DUF1076 domain-containing protein	B6DZC0	Enterobacteria_phage	1.1e-106	99.1
QAV76307.1\|5065651_5065900_-	damage-inducible protein DinI	A5LH55	Enterobacteria_phage	3.1e-38	98.8
QAV76308.1\|5065961_5067059_-\|integrase	site-specific integrase	S5MDN5	Escherichia_phage	2.1e-211	99.5
QAV76309.1\|5067147_5068185_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
QAV76310.1\|5068318_5068561_+	envelope stress response protein PspG	NA	NA	NA	NA
QAV76311.1\|5068726_5069710_-	quinone oxidoreductase	NA	NA	NA	NA
QAV76312.1\|5069792_5071208_+	replicative DNA helicase DnaB	O80281	Escherichia_phage	8.3e-200	78.1
5075353:5075368	attR	NA	NA	NA	NA

DBSCAN-SWA_13

5208088 : 5267116

Pectobacterium_phage(11.11%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAV76433.1\|5208088_5209348_+\|protease	FtsH protease activity modulator HflK	A0A1L2CVV0	Pectobacterium_phage	3.6e-05	25.5
QAV76434.1\|5209350_5210355_+\|protease	protease modulator HflC	NA	NA	NA	NA
QAV76435.1\|5210436_5210634_+	DUF2065 domain-containing protein	NA	NA	NA	NA
QAV76436.1\|5210737_5212036_+	adenylosuccinate synthase	W5S5V7	Pithovirus	2.2e-66	35.9
QAV76437.1\|5212240_5212666_+	HTH-type transcriptional repressor NsrR	NA	NA	NA	NA
QAV76438.1\|5212704_5215146_+	ribonuclease R	Q0GXV6	Lactococcus_phage	2.4e-66	32.9
QAV76439.1\|5215326_5216058_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
QAV76440.1\|5216184_5216586_+	DUF2170 family protein	NA	NA	NA	NA
QAV76441.1\|5216604_5217303_+	PspA/IM30 family protein	NA	NA	NA	NA
QAV76442.1\|5217353_5218013_+	DUF2491 family protein	NA	NA	NA	NA
QAV76443.1\|5218030_5218429_+	DUF350 domain-containing protein	NA	NA	NA	NA
QAV76444.1\|5218438_5219077_+	DUF1190 domain-containing protein	NA	NA	NA	NA
QAV76445.1\|5219079_5220243_+	glutathionylspermidine synthase preATP-grasp family protein	B2ZXR7	Ralstonia_phage	8.3e-81	43.8
QAV76446.1\|5220326_5221952_+	isovaleryl-CoA dehydrogenase	NA	NA	NA	NA
QAV76447.1\|5222068_5222344_-\|protease	protease activator YjfN	NA	NA	NA	NA
QAV76448.1\|5222492_5222822_-	biofilm peroxide resistance protein BsmA	NA	NA	NA	NA
QAV76449.1\|5223003_5223753_+	esterase	NA	NA	NA	NA
QAV76450.1\|5223749_5224505_-	HTH-type transcriptional regulator UlaR	NA	NA	NA	NA
QAV76451.1\|5226031_5227429_+	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
QAV76452.1\|5227444_5227750_+	PTS ascorbate transporter subunit IIB	NA	NA	NA	NA
QAV76453.1\|5227759_5228224_+	PTS ascorbate transporter subunit IIA	NA	NA	NA	NA
QAV76454.1\|5228237_5228888_+	3-keto-L-gulonate-6-phosphate decarboxylase UlaD	NA	NA	NA	NA
QAV76455.1\|5228897_5229752_+	L-ribulose-5-phosphate 3-epimerase UlaE	NA	NA	NA	NA
QAV76456.1\|5229751_5230438_+	L-ribulose-5-phosphate 4-epimerase UlaF	NA	NA	NA	NA
QAV76457.1\|5230566_5230842_-	DUF1471 domain-containing protein	NA	NA	NA	NA
QAV76458.1\|5231168_5231564_+	30S ribosomal protein S6	NA	NA	NA	NA
QAV76459.1\|5231570_5231885_+	primosomal replication protein N	NA	NA	NA	NA
QAV76460.1\|5231889_5232117_+	30S ribosomal protein S18	NA	NA	NA	NA
QAV76461.1\|5232158_5232608_+	50S ribosomal protein L9	NA	NA	NA	NA
QAV76462.1\|5232678_5233473_-	DUF2686 family protein	NA	NA	NA	NA
QAV76463.1\|5234095_5234527_-\|transposase	IS200/IS605-like element IS609 family transposase	A0A1S5RHE3	Helicobacter_phage	5.7e-43	59.9
QAV76464.1\|5234534_5235743_+\|transposase	transposase	A0A077SL42	Escherichia_phage	5.4e-208	93.0
QAV76465.1\|5235877_5236516_-	cell division protein YtfB	NA	NA	NA	NA
QAV76466.1\|5236733_5237354_+	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
QAV76467.1\|5237662_5239075_+	D-serine/D-alanine/glycine transporter	NA	NA	NA	NA
QAV76468.1\|5239119_5239782_-	iron-sulfur cluster repair protein YtfE	NA	NA	NA	NA
QAV76872.1\|5239889_5240855_-	DMT family transporter	NA	NA	NA	NA
QAV76469.1\|5240962_5241823_-	SDR family oxidoreductase	NA	NA	NA	NA
QAV76470.1\|5241911_5242292_+	transcriptional regulator	NA	NA	NA	NA
QAV76471.1\|5242409_5244353_-	2',3'-cyclic-nucleotide 2'-phosphodiesterase	NA	NA	NA	NA
QAV76472.1\|5244542_5245283_+	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA
QAV76473.1\|5245494_5246433_+	hypothetical protein	NA	NA	NA	NA
QAV76474.1\|5246495_5247050_-	YtfJ family protein	NA	NA	NA	NA
QAV76475.1\|5247374_5247581_+	DUF1107 domain-containing protein	NA	NA	NA	NA
QAV76476.1\|5247676_5249020_-	HlyC/CorC family transporter	NA	NA	NA	NA
QAV76477.1\|5249342_5249981_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
QAV76478.1\|5250186_5251920_+	autotransporter assembly complex protein TamA	NA	NA	NA	NA
QAV76479.1\|5251916_5255696_+	autotransporter assembly complex protein TamB	NA	NA	NA	NA
QAV76480.1\|5255698_5256040_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA
QAV76481.1\|5256251_5256503_+	type II toxin-antitoxin system ChpS family antitoxin	NA	NA	NA	NA
QAV76482.1\|5256496_5256847_+	endoribonuclease toxin ChpB	NA	NA	NA	NA
QAV76483.1\|5256926_5257457_-	inorganic diphosphatase	A0A2H4J8U1	uncultured_Caudovirales_phage	1.2e-55	63.3
QAV76484.1\|5257766_5258723_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
QAV76485.1\|5258862_5260365_+	sugar ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	1.8e-11	30.3
QAV76873.1\|5260378_5261401_+	ABC transporter permease	NA	NA	NA	NA
QAV76486.1\|5261387_5262383_+	sugar ABC transporter permease YjfF	NA	NA	NA	NA
QAV76487.1\|5262415_5263414_-	class 1 fructose-bisphosphatase	A0A1V0SKX4	Klosneuvirus	2.1e-69	42.6
QAV76488.1\|5263589_5264963_+	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA
QAV76489.1\|5265118_5265670_-	ribosome-associated protein	NA	NA	NA	NA
QAV76490.1\|5265763_5267116_+\|protease	metalloprotease PmbA	NA	NA	NA	NA

DBSCAN-SWA_14

5299554 : 5312130

Enterobacteria_phage(81.82%)

integrase

attL 5294587:5294602|attR 5313082:5313097

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5294587:5294602	attL	NA	NA	NA	NA
QAV76517.1\|5299554_5300829_+	DUF4102 domain-containing protein	B7SYF8	Stenotrophomonas_phage	4.1e-73	41.0
QAV76518.1\|5300996_5301302_+	XRE family transcriptional regulator	NA	NA	NA	NA
QAV76876.1\|5301378_5302113_+	restriction endonuclease	NA	NA	NA	NA
QAV76519.1\|5302150_5303395_-	DNA cytosine methyltransferase	F2Y148	Organic_Lake_phycodnavirus	9.3e-46	31.1
QAV76520.1\|5303404_5303668_-	hypothetical protein	NA	NA	NA	NA
QAV76521.1\|5303720_5304293_-	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	2.2e-95	97.3
QAV76522.1\|5304366_5304867_-	transactivation protein	NA	NA	NA	NA
QAV76523.1\|5304863_5305598_-	glycoprotein 3	Q7M2A2	Enterobacteria_phage	2.3e-129	98.8
QAV76524.1\|5306149_5306416_+	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	4.9e-45	100.0
QAV76525.1\|5306412_5307003_+	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	5.3e-60	90.3
QAV76526.1\|5306995_5307283_+	Derepression protein	Q7M2A0	Enterobacteria_phage	2.5e-47	96.8
QAV76527.1\|5307275_5307731_+	hypothetical protein	Q7M298	Enterobacteria_phage	4.7e-64	98.2
QAV76528.1\|5307866_5308187_+	hypothetical protein	NA	NA	NA	NA
QAV76529.1\|5308201_5310535_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	99.1
QAV76530.1\|5310595_5310829_+	hypothetical protein	NA	NA	NA	NA
QAV76531.1\|5310749_5311085_+\|integrase	integrase	Q38404	Enterobacteria_phage	2.7e-24	100.0
QAV76877.1\|5311302_5312130_+	DUF4102 domain-containing protein	Q7M297	Enterobacteria_phage	4.3e-55	40.4
5313082:5313097	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP035367

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

29207 : 88852

Escherichia_phage(23.81%)

integrase,transposase,protease

attL 25777:25790|attR 33479:33492

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
25777:25790	attL	NA	NA	NA	NA
QAV76911.1\|29207_30014_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	3.7e-56	99.1
QAV76969.1\|30690_30771_-	AMP nucleosidase	A0A0N7BTS3	Escherichia_phage	1.5e-07	100.0
QAV76912.1\|31331_32544_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
QAV76913.1\|32608_33364_+	replication initiation protein RepE	I3WF20	Macacine_betaherpesvirus	1.1e-142	99.6
QAV76914.1\|33951_35118_+	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	7.0e-229	100.0
33479:33492	attR	NA	NA	NA	NA
QAV76915.1\|35117_36089_+	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	4.8e-175	100.0
QAV76916.1\|36387_36660_+	hypothetical protein	NA	NA	NA	NA
QAV76970.1\|36697_37600_+	DUF1281 domain-containing protein	NA	NA	NA	NA
QAV76917.1\|37603_37909_+	hypothetical protein	NA	NA	NA	NA
QAV76918.1\|37985_38669_+	DNA methylase	A0A2I7RE86	Vibrio_phage	8.7e-30	37.9
QAV76919.1\|38669_38891_+	hypothetical protein	NA	NA	NA	NA
QAV76920.1\|38784_39339_+	DUF1380 domain-containing protein	NA	NA	NA	NA
QAV76972.1\|40033_40606_+	DUF1472 domain-containing protein	NA	NA	NA	NA
QAV76971.1\|40701_41004_+	antirestriction protein	NA	NA	NA	NA
QAV76921.1\|41470_41662_+	hypothetical protein	NA	NA	NA	NA
QAV76973.1\|41780_42170_+	hypothetical protein	NA	NA	NA	NA
QAV76922.1\|42137_42395_-	hypothetical protein	NA	NA	NA	NA
QAV76923.1\|42657_42888_+	hypothetical protein	NA	NA	NA	NA
QAV76924.1\|42939_44301_+	DUF3560 domain-containing protein	NA	NA	NA	NA
QAV76925.1\|44347_44911_+	class I SAM-dependent methyltransferase	A8HNV9	Thalassomonas_phage	1.0e-20	36.7
QAV76926.1\|44996_45440_-	hypothetical protein	NA	NA	NA	NA
QAV76927.1\|45509_45716_+	single-stranded DNA-binding protein	NA	NA	NA	NA
QAV76928.1\|45741_46194_+	single-stranded DNA-binding protein	A0A1B0VAF5	Salmonella_phage	4.4e-46	59.3
QAV76929.1\|46250_46484_+	DUF905 domain-containing protein	NA	NA	NA	NA
QAV76930.1\|46549_48508_+	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	1.8e-19	26.7
QAV76974.1\|48562_48997_+	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
QAV76931.1\|48993_49755_+	plasmid SOS inhibition protein A	NA	NA	NA	NA
QAV76932.1\|49986_50145_+	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
QAV76933.1\|50326_52300_+	NikB	NA	NA	NA	NA
QAV76934.1\|52367_52799_+	tolA family protein	NA	NA	NA	NA
QAV76935.1\|54550_64060_+	toxin B	NA	NA	NA	NA
QAV76936.1\|64812_66025_+\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	6.5e-169	99.7
QAV76937.1\|65991_66102_+	AMP nucleosidase	A0A0N7BTS3	Escherichia_phage	2.1e-07	100.0
QAV76938.1\|66367_66748_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
QAV76939.1\|66744_67092_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
QAV76940.1\|67141_68680_+\|transposase	IS66-like element ISEc8 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.5e-300	100.0
QAV76941.1\|70081_70828_+	type-F conjugative transfer system pilin acetylase TraX	A0A077JBM8	Xanthomonas_phage	6.4e-10	30.8
QAV76942.1\|70886_71747_+	alpha/beta hydrolase	A2RQC8	Archaeal_BJ1_virus	2.3e-11	23.0
QAV76943.1\|71849_72410_+	fertility inhibition protein FinO	NA	NA	NA	NA
QAV76944.1\|72542_72755_+	ANR family transcriptional regulator	NA	NA	NA	NA
QAV76945.1\|72999_73461_+	endonuclease	A0A0R6PHV6	Moraxella_phage	5.5e-20	37.1
QAV76946.1\|73506_73716_+	hemolysin expression modulator Hha	NA	NA	NA	NA
QAV76947.1\|73753_74092_+	hypothetical protein	NA	NA	NA	NA
QAV76948.1\|74331_74586_+	replication regulatory protein RepA	NA	NA	NA	NA
QAV76976.1\|74629_74740_-	replication protein RepA	NA	NA	NA	NA
QAV76975.1\|74821_74896_+	RepA leader peptide Tap	NA	NA	NA	NA
QAV76949.1\|74888_75746_+	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
QAV76950.1\|76107_76302_+	replication protein	NA	NA	NA	NA
QAV76951.1\|76317_76449_-	replication protein RepA4	NA	NA	NA	NA
QAV76952.1\|76656_76941_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
QAV76953.1\|76940_77216_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
QAV76954.1\|77310_77517_+	hypothetical protein	NA	NA	NA	NA
QAV76955.1\|79219_81430_+	catalase/peroxidase KatP	NA	NA	NA	NA
QAV76956.1\|81473_81863_+	cytochrome b562 family protein	NA	NA	NA	NA
QAV76957.1\|82873_82969_+	AMP nucleosidase	A0A0N7BTS3	Escherichia_phage	1.8e-07	100.0
QAV76958.1\|83088_86991_+\|protease	serine protease autotransporter EspP	Q9LA58	Enterobacterial_phage	5.5e-238	40.4
QAV76959.1\|87313_88852_-\|transposase	IS66-like element ISEc8 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.5e-300	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP035366

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP035367

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection