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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP026138 Klebsiella pneumoniae strain F77 plasmid pF77_2, complete sequence 0 crisprs DEDDh,RT 0 0 1 0
CP026137 Klebsiella pneumoniae strain F77 plasmid pF77_1, complete sequence 0 crisprs NA 0 0 2 0
CP026139 Klebsiella pneumoniae strain F77 plasmid pF77_3, complete sequence 0 crisprs RT,cas3 0 0 1 0
CP026136 Klebsiella pneumoniae strain F77 chromosome, complete genome 1 crisprs csa3,RT,cas3,DEDDh,DinG,WYL 0 0 12 0

Results visualization

1. CP026137
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 4169 : 62588 58 Escherichia_phage(39.39%) transposase NA
DBSCAN-SWA_2 71870 : 83559 10 Escherichia_phage(50.0%) transposase,integrase attL 80947:81006|attR 88497:88559
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP026139
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 54893 : 68952 16 Escherichia_phage(37.5%) transposase,integrase attL 60293:60352|attR 68185:69004
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. CP026136
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP026136_1 4592542-4592636 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 449876 : 519254 75 uncultured_Caudovirales_phage(61.11%) protease,terminase,head,tail,portal,integrase,tRNA,capsid attL 467484:467501|attR 483479:483496
DBSCAN-SWA_2 1201243 : 1272296 84 Salmonella_phage(76.6%) head,tail,portal,transposase,coat,integrase,tRNA,capsid,plate attL 1210852:1210869|attR 1251830:1251847
DBSCAN-SWA_3 1377012 : 1429755 62 Salmonella_phage(40.38%) tail,holin,transposase,terminase NA
DBSCAN-SWA_4 1759952 : 1766858 6 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_5 1808793 : 1824539 15 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_6 2808032 : 2818919 9 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_7 3012184 : 3148858 157 uncultured_Caudovirales_phage(21.43%) protease,terminase,head,tail,lysis,transposase,holin,integrase,plate attL 3037754:3037771|attR 3157298:3157315
DBSCAN-SWA_8 3276530 : 3364409 96 Klebsiella_phage(45.45%) terminase,head,tail,portal,holin,integrase,tRNA,capsid attL 3303333:3303347|attR 3362220:3362234
DBSCAN-SWA_9 3580752 : 3675613 99 Salmonella_phage(55.93%) protease,head,tail,portal,integrase,tRNA,capsid,plate attL 3636278:3636296|attR 3675688:3675706
DBSCAN-SWA_10 4328047 : 4339700 13 Enterobacteria_phage(70.0%) integrase attL 4327899:4327912|attR 4332112:4332125
DBSCAN-SWA_11 4809145 : 4818670 10 Enterobacteria_phage(83.33%) transposase NA
DBSCAN-SWA_12 5005318 : 5043374 38 Salmonella_phage(16.67%) integrase,transposase attL 4995510:4995525|attR 5024729:5024744
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. CP026138
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2364 : 112774 115 Salmonella_phage(81.19%) tail,integrase,capsid,transposase attL 53409:53433|attR 72522:72546
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage