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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP026142 Klebsiella pneumoniae strain F127 plasmid pF127_2, complete sequence 0 crisprs DEDDh 0 0 0 0
CP026140 Klebsiella pneumoniae strain F127 chromosome, complete genome 1 crisprs csa3,RT,cas3,DEDDh,DinG,WYL 0 0 12 0
CP026141 Klebsiella pneumoniae strain F127 plasmid pF127_1, complete sequence 0 crisprs RT 0 0 4 0

Results visualization

1. CP026140
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP026140_1 4567882-4567976 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 451072 : 520450 75 uncultured_Caudovirales_phage(61.11%) terminase,portal,capsid,tail,tRNA,head,integrase,protease attL 468680:468697|attR 484675:484692
DBSCAN-SWA_2 1219424 : 1268568 63 Salmonella_phage(80.0%) portal,capsid,tail,plate,head,tRNA,transposase,coat,integrase attL 1219082:1219098|attR 1246041:1246057
DBSCAN-SWA_3 1373284 : 1426027 63 Salmonella_phage(40.38%) transposase,terminase,tail,holin NA
DBSCAN-SWA_4 1756224 : 1763130 6 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_5 1803865 : 1819611 15 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_6 2786041 : 2796928 9 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_7 2990193 : 3126870 156 uncultured_Caudovirales_phage(21.43%) terminase,holin,tail,plate,head,transposase,integrase,lysis,protease attL 3014566:3014583|attR 3135310:3135327
DBSCAN-SWA_8 3254542 : 3342419 95 Klebsiella_phage(46.51%) terminase,portal,capsid,holin,tail,tRNA,head,integrase attL 3281344:3281358|attR 3340230:3340244
DBSCAN-SWA_9 3558762 : 3651713 96 Salmonella_phage(56.9%) portal,capsid,tail,plate,tRNA,head,integrase,protease attL 3614288:3614306|attR 3651788:3651806
DBSCAN-SWA_10 4304585 : 4316238 13 Enterobacteria_phage(70.0%) integrase attL 4305035:4305049|attR 4328091:4328105
DBSCAN-SWA_11 4784483 : 4794008 10 Enterobacteria_phage(83.33%) transposase NA
DBSCAN-SWA_12 4980656 : 5018712 38 Salmonella_phage(16.67%) integrase,transposase attL 4970848:4970863|attR 5000067:5000082
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP026141
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 38174 : 52802 14 Escherichia_phage(44.44%) protease,transposase NA
DBSCAN-SWA_2 59212 : 91610 37 Escherichia_phage(30.0%) transposase NA
DBSCAN-SWA_3 114319 : 125478 11 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_4 138641 : 151032 10 Escherichia_phage(62.5%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage