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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP026152 Klebsiella pneumoniae strain F138 plasmid pF138_3, complete sequence 0 crisprs RT 0 0 2 0
CP026149 Klebsiella pneumoniae strain F138 chromosome, complete genome 1 crisprs csa3,RT,cas3,DEDDh,DinG,WYL 0 0 12 0
CP026150 Klebsiella pneumoniae strain F138 plasmid pF138_1, complete sequence 0 crisprs DEDDh,RT 0 0 1 0
CP026151 Klebsiella pneumoniae strain F138 plasmid pF138_2, complete sequence 0 crisprs RT,csa3,cas3 0 0 1 0

Results visualization

1. CP026152
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 4025 : 59396 59 Escherichia_phage(36.84%) integrase,protease,transposase attL 3963:4022|attR 63257:64077
DBSCAN-SWA_2 67138 : 80944 18 Enterobacteria_phage(18.18%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP026151
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 54708 : 112523 51 uncultured_Caudovirales_phage(33.33%) holin,transposase,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. CP026150
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 10651 : 110883 116 Salmonella_phage(82.35%) capsid,terminase,integrase,tail attL 77322:77346|attR 96435:96459
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. CP026149
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP026149_1 4595735-4595829 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 450653 : 520031 75 uncultured_Caudovirales_phage(61.11%) terminase,protease,capsid,integrase,tRNA,head,portal,tail attL 468261:468278|attR 484256:484273
DBSCAN-SWA_2 1200465 : 1276369 90 Salmonella_phage(76.6%) coat,capsid,integrase,tRNA,transposase,portal,head,plate,tail attL 1210074:1210091|attR 1255903:1255920
DBSCAN-SWA_3 1381085 : 1433827 62 Salmonella_phage(39.22%) terminase,tail,transposase,holin NA
DBSCAN-SWA_4 1764023 : 1770929 6 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_5 1811664 : 1827410 15 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_6 2812430 : 2823317 9 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_7 3016559 : 3155143 159 uncultured_Caudovirales_phage(21.18%) terminase,protease,integrase,transposase,head,holin,plate,tail,lysis attL 3042129:3042146|attR 3163583:3163600
DBSCAN-SWA_8 3282815 : 3370694 96 Klebsiella_phage(45.45%) terminase,capsid,integrase,tRNA,holin,head,portal,tail attL 3309618:3309632|attR 3368505:3368519
DBSCAN-SWA_9 3587037 : 3679988 97 Salmonella_phage(56.9%) protease,capsid,integrase,tRNA,head,portal,plate,tail attL 3642563:3642581|attR 3680063:3680081
DBSCAN-SWA_10 4332775 : 4344091 12 Enterobacteria_phage(77.78%) integrase attL 4332111:4332125|attR 4355944:4355958
DBSCAN-SWA_11 4812336 : 4821861 10 Enterobacteria_phage(83.33%) transposase NA
DBSCAN-SWA_12 5008509 : 5046565 38 Salmonella_phage(16.67%) transposase,integrase attL 4998701:4998716|attR 5027920:5027935
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage