CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP026155	Klebsiella pneumoniae strain B12(AN) chromosome, complete genome	1 crisprs	csa3,cas3,DEDDh,RT,DinG,WYL	0	1	6	0
CP026156	Klebsiella pneumoniae strain B12(AN) plasmid pB12AN_1, complete sequence	0 crisprs	DEDDh	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP026155_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026155_2

4718115-4718209

Orphan

Consensus_repeat	Method
ACTATGGTTTTTATGGTTTTTATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP026155_2

>merge|CP026155|2|4718115-4718209|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATGGTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATGACTGTGGTTTTTATGGTTTTTATT

>CP026155|2|2|4718115-4718209|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATG	GTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATG
ACTGTGGTTTTTATGGTTTTTATT

Protein	Signature genes	Signature genes Name	Protein_function
CP026155.1\|QAW98235.1\|4716444_4716633_+\|hypothetical-protein	unknown	unknown	unknown
CP026155.1\|QAW97281.1\|4709744_4712102_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
CP026155.1\|QAW97295.1\|4728455_4728659_-\|hypothetical-protein	unknown	unknown	unknown
CP026155.1\|QAW97277.1\|4704330_4705176_-\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
CP026155.1\|QAW97293.1\|4727272_4727650_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
CP026155.1\|QAW97279.1\|4707233_4708736_+\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
CP026155.1\|QAW97289.1\|4721767_4724116_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
CP026155.1\|QAW97287.1\|4719965_4720664_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
CP026155.1\|QAW97288.1\|4720696_4721524_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
CP026155.1\|QAW97292.1\|4726448_4727270_+\|ribosomal-RNA-small-subunit-methyltransferase-A	unknown	unknown	gnl\|CDD\|234708
CP026155.1\|QAW97278.1\|4705513_4707223_+\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
CP026155.1\|QAW97280.1\|4708873_4709569_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
CP026155.1\|QAW97284.1\|4715942_4716482_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
CP026155.1\|QAW97290.1\|4724170_4725457_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
CP026155.1\|QAW97286.1\|4718350_4719976_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
CP026155.1\|QAW97282.1\|4712289_4715196_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
CP026155.1\|QAW97291.1\|4725462_4726452_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
CP026155.1\|QAW97285.1\|4716661_4718026_-\|malate-permease	unknown	unknown	gnl\|CDD\|377030
CP026155.1\|QAW97294.1\|4727654_4728503_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
CP026155.1\|QAW97283.1\|4715208_4715868_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659

Protein	Function_ID	Function_description	E-value
CP026155.1\|QAW97281.1\|4709744_4712102_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
CP026155.1\|QAW97277.1\|4704330_4705176_-\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
CP026155.1\|QAW97293.1\|4727272_4727650_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
CP026155.1\|QAW97279.1\|4707233_4708736_+\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
CP026155.1\|QAW97289.1\|4721767_4724116_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
CP026155.1\|QAW97287.1\|4719965_4720664_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
CP026155.1\|QAW97288.1\|4720696_4721524_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
CP026155.1\|QAW97292.1\|4726448_4727270_+\|ribosomal-RNA-small-subunit-methyltransferase-A	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
CP026155.1\|QAW97278.1\|4705513_4707223_+\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
CP026155.1\|QAW97280.1\|4708873_4709569_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
CP026155.1\|QAW97284.1\|4715942_4716482_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
CP026155.1\|QAW97290.1\|4724170_4725457_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
CP026155.1\|QAW97286.1\|4718350_4719976_+\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173
CP026155.1\|QAW97282.1\|4712289_4715196_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
CP026155.1\|QAW97291.1\|4725462_4726452_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
CP026155.1\|QAW97285.1\|4716661_4718026_-\|malate-permease	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
CP026155.1\|QAW97294.1\|4727654_4728503_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
CP026155.1\|QAW97283.1\|4715208_4715868_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161

>CP026155.1|QAW97285.1|4716661_4718026_-|malate-permease
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>CP026155.1|QAW98235.1|4716444_4716633_+|hypothetical-protein
MLTPAWAGVSTDINSSPTYDKYDSAWTVMMMVAIADRALIVTLNAEHLGYRTQIFSAFCSGK
>CP026155.1|QAW97284.1|4715942_4716482_-|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>CP026155.1|QAW97283.1|4715208_4715868_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>CP026155.1|QAW97282.1|4712289_4715196_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESIDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAGIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>CP026155.1|QAW97281.1|4709744_4712102_+|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLIEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSHVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>CP026155.1|QAW97280.1|4708873_4709569_+|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>CP026155.1|QAW97279.1|4707233_4708736_+|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATVEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>CP026155.1|QAW97278.1|4705513_4707223_+|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSKAALTH
>CP026155.1|QAW97277.1|4704330_4705176_-|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVREACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>CP026155.1|QAW97286.1|4718350_4719976_+|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>CP026155.1|QAW97287.1|4719965_4720664_+|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>CP026155.1|QAW97288.1|4720696_4721524_-|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>CP026155.1|QAW97289.1|4721767_4724116_+|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>CP026155.1|QAW97290.1|4724170_4725457_+|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>CP026155.1|QAW97291.1|4725462_4726452_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>CP026155.1|QAW97292.1|4726448_4727270_+|ribosomal-RNA-small-subunit-methyltransferase-A
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>CP026155.1|QAW97293.1|4727272_4727650_+|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>CP026155.1|QAW97294.1|4727654_4728503_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>CP026155.1|QAW97295.1|4728455_4728659_-|hypothetical-protein
MFPVAGFVFFLKRSPGRQIAHKRRSGKALAATRQNDAAGSPDKAQRAAIREESGRDGFAFVEAFLPV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Identity
CP026155_1	1.1\|4244923\|36\|CP026155\|CRISPRCasFinder	4244923-4244958	36	MK448233	Klebsiella phage ST11-VIM1phi8.1, complete genome	8447-8482	1.0
CP026155_1	1.1\|4244923\|36\|CP026155\|CRISPRCasFinder	4244923-4244958	36	MK448235	Klebsiella phage ST512-KPC3phi13.1, complete genome	8447-8482	1.0
CP026155_1	1.1\|4244923\|36\|CP026155\|CRISPRCasFinder	4244923-4244958	36	MK448231	Klebsiella phage ST101-KPC2phi6.1, complete genome	11383-11418	1.0

1. spacer 1.1|4244923|36|CP026155|CRISPRCasFinder matches to MK448233 (Klebsiella phage ST11-VIM1phi8.1, complete genome) position: , mismatch: 0, identity: 1.0

cctcgccggtacgcagcgtggttactgggtttgcgt	CRISPR spacer
cctcgccggtacgcagcgtggttactgggtttgcgt	Protospacer
************************************

2. spacer 1.1|4244923|36|CP026155|CRISPRCasFinder matches to MK448235 (Klebsiella phage ST512-KPC3phi13.1, complete genome) position: , mismatch: 0, identity: 1.0

cctcgccggtacgcagcgtggttactgggtttgcgt	CRISPR spacer
cctcgccggtacgcagcgtggttactgggtttgcgt	Protospacer
************************************

3. spacer 1.1|4244923|36|CP026155|CRISPRCasFinder matches to MK448231 (Klebsiella phage ST101-KPC2phi6.1, complete genome) position: , mismatch: 0, identity: 1.0

cctcgccggtacgcagcgtggttactgggtttgcgt	CRISPR spacer
cctcgccggtacgcagcgtggttactgggtttgcgt	Protospacer
************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

445176 : 514554

uncultured_Caudovirales_phage(61.11%)

head,integrase,terminase,capsid,portal,tRNA,protease,tail

attL 462784:462801|attR 478779:478796

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAW93328.1\|445176_446124_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	2.2e-07	37.2
QAW93329.1\|446138_446648_-	peptide deformylase	E3SLL2	Synechococcus_phage	2.6e-18	40.3
QAW93330.1\|446776_447901_+	DNA-protecting protein DprA	NA	NA	NA	NA
QAW93331.1\|447872_448346_+	DUF494 domain-containing protein	NA	NA	NA	NA
QAW93332.1\|448371_448914_+	hypothetical protein	NA	NA	NA	NA
QAW93333.1\|448918_449491_+	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA
QAW93334.1\|449494_450313_+	shikimate dehydrogenase	NA	NA	NA	NA
QAW93335.1\|450309_450567_+	DUF1488 domain-containing protein	NA	NA	NA	NA
QAW98059.1\|450542_451097_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA
QAW93336.1\|456892_457114_-	hypothetical protein	NA	NA	NA	NA
QAW93337.1\|457407_460518_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
QAW93338.1\|460530_461670_-	MexX family efflux pump subunit	NA	NA	NA	NA
QAW93339.1\|462048_462699_+	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA
462784:462801	attL	NA	NA	NA	NA
QAW93340.1\|462974_464201_+\|integrase	integrase	A0A2H4JB45	uncultured_Caudovirales_phage	1.8e-150	62.2
QAW93341.1\|464293_465235_+	hypothetical protein	NA	NA	NA	NA
QAW93342.1\|465416_465701_+	transcriptional regulator	NA	NA	NA	NA
QAW93343.1\|465711_466491_+	hypothetical protein	Q8HA02	Enterobacteria_phage	6.2e-40	51.5
QAW93344.1\|466614_466809_-	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
QAW98060.1\|467032_467212_+	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	2.6e-26	94.9
QAW93345.1\|467204_467393_+	hypothetical protein	NA	NA	NA	NA
QAW93346.1\|467385_467700_+	hypothetical protein	NA	NA	NA	NA
QAW93347.1\|467696_468065_+	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	3.7e-51	81.1
QAW93348.1\|468061_468427_+	hypothetical protein	NA	NA	NA	NA
QAW93349.1\|468426_470562_+	DNA primase	A0A1W6JPG0	Morganella_phage	3.4e-205	62.4
QAW93350.1\|470904_471240_+	hypothetical protein	NA	NA	NA	NA
QAW93351.1\|471288_471801_-	hypothetical protein	NA	NA	NA	NA
QAW93352.1\|472064_473231_+\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	9.8e-207	95.9
QAW93353.1\|473282_473843_+\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.2e-98	95.7
QAW93354.1\|473844_475086_+\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.0e-230	96.5
QAW93355.1\|475082_475418_+\|head,tail	head-tail adaptor	A0A2H4JHK5	uncultured_Caudovirales_phage	3.7e-26	57.8
QAW93356.1\|475414_475714_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	3.4e-39	80.8
QAW93357.1\|475713_476157_+	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.8e-77	91.8
QAW93358.1\|476283_476475_+\|terminase	terminase	NA	NA	NA	NA
QAW93359.1\|476432_476789_+\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	5.5e-60	99.2
QAW93360.1\|476772_478434_+\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	98.0
QAW93361.1\|478436_478628_+	hypothetical protein	NA	NA	NA	NA
QAW93362.1\|478781_479078_-	Fis family transcriptional regulator	NA	NA	NA	NA
478779:478796	attR	NA	NA	NA	NA
QAW93363.1\|479102_480068_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
QAW93364.1\|480225_480420_-	hypothetical protein	NA	NA	NA	NA
QAW93365.1\|480425_481307_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
QAW93366.1\|481318_482770_-	sodium/panthothenate symporter	NA	NA	NA	NA
QAW93367.1\|482759_483002_-	hypothetical protein	NA	NA	NA	NA
QAW93368.1\|483112_484462_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
QAW93369.1\|484472_484940_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
QAW93370.1\|484962_485415_-	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
QAW93371.1\|485638_486247_-	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
QAW93372.1\|486246_487248_-	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
QAW93373.1\|487476_487668_+	hypothetical protein	NA	NA	NA	NA
QAW93374.1\|487747_489688_+	RNase E specificity factor CsrD	NA	NA	NA	NA
QAW93375.1\|489809_490016_-	hypothetical protein	NA	NA	NA	NA
QAW93376.1\|489993_491037_+	rod shape-determining protein	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
QAW93377.1\|491107_492100_+	rod shape-determining protein MreC	NA	NA	NA	NA
QAW93378.1\|492099_492588_+	rod shape-determining protein MreD	NA	NA	NA	NA
QAW93379.1\|492595_493177_+	septum formation inhibitor Maf	NA	NA	NA	NA
QAW93380.1\|493179_494649_+	ribonuclease G	NA	NA	NA	NA
QAW93381.1\|494686_498484_+	AsmA2 domain-containing protein	NA	NA	NA	NA
QAW93382.1\|498572_500018_+\|protease	metalloprotease TldD	NA	NA	NA	NA
QAW93383.1\|500053_500983_-	transcriptional regulator	NA	NA	NA	NA
QAW93384.1\|501114_501318_+	protein AaeX	NA	NA	NA	NA
QAW93385.1\|501325_502258_+	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
QAW93386.1\|502263_504231_+	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
QAW93387.1\|504310_504586_+	hypothetical protein	NA	NA	NA	NA
QAW93388.1\|504636_504903_-	DUF1471 domain-containing protein	NA	NA	NA	NA
QAW93389.1\|505001_505265_-	DUF1471 domain-containing protein	NA	NA	NA	NA
QAW93390.1\|505640_506111_-	arginine repressor	NA	NA	NA	NA
QAW93391.1\|506525_507464_+	malate dehydrogenase	NA	NA	NA	NA
QAW93392.1\|507600_508659_-\|protease	serine endoprotease DegS	NA	NA	NA	NA
QAW93393.1\|508746_510114_-\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	6.0e-22	25.3
QAW93394.1\|510287_510686_-	hypothetical protein	NA	NA	NA	NA
QAW93395.1\|510876_512004_+	cell division protein ZapE	NA	NA	NA	NA
QAW93396.1\|512269_512698_+	50S ribosomal protein L13	NA	NA	NA	NA
QAW93397.1\|512713_513106_+	30S ribosomal protein S9	NA	NA	NA	NA
QAW93398.1\|513215_513419_-	hypothetical protein	NA	NA	NA	NA
QAW93399.1\|513417_514056_+	stringent starvation protein A	NA	NA	NA	NA
QAW93400.1\|514059_514554_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.5e-26	54.8

DBSCAN-SWA_2

2796778 : 2879525

Escherichia_phage(42.86%)

protease,transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAW95500.1\|2796778_2797898_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	6.0e-52	43.2
QAW95501.1\|2798785_2799490_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAW95502.1\|2800462_2801551_-	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
QAW95503.1\|2801637_2801898_-	hypothetical protein	A0A077SK33	Escherichia_phage	1.9e-41	100.0
QAW95504.1\|2802195_2803056_+	class A extended-spectrum beta-lactamase SHV-5	A0A077SL40	Escherichia_phage	4.4e-156	99.7
QAW95505.1\|2803076_2803838_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
QAW95506.1\|2804098_2805001_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	5.3e-160	100.0
QAW95507.1\|2805012_2806206_+	hypothetical protein	A0A077SLJ7	Escherichia_phage	3.7e-209	100.0
QAW95508.1\|2806217_2806922_+\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
QAW95509.1\|2807484_2808345_-	aminoglycoside N-acetyltransferase AAC(3)-IId	NA	NA	NA	NA
QAW95510.1\|2808660_2809780_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	6.0e-52	43.2
QAW95511.1\|2810666_2811371_-\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
QAW95512.1\|2811725_2812082_-	hypothetical protein	NA	NA	NA	NA
QAW95513.1\|2812027_2812612_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
QAW95514.1\|2812611_2813850_-	MFS transporter	NA	NA	NA	NA
QAW95515.1\|2813846_2814752_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
QAW95516.1\|2814873_2815542_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	1.9e-130	99.5
QAW95517.1\|2816845_2817550_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
QAW95518.1\|2818405_2819233_+	phosphonate ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.4e-07	25.7
QAW95519.1\|2819229_2820093_+	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
QAW98146.1\|2820101_2820929_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
QAW95520.1\|2820937_2821948_+	phosphonate dehydrogenase	NA	NA	NA	NA
QAW95521.1\|2821941_2822811_+	LysR family transcriptional regulator	NA	NA	NA	NA
QAW98148.1\|2823516_2823843_-	hypothetical protein	NA	NA	NA	NA
QAW98147.1\|2823894_2823981_+	ABC transporter	NA	NA	NA	NA
QAW95522.1\|2824019_2825000_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
QAW98149.1\|2826986_2827268_+	DNA-binding protein	NA	NA	NA	NA
QAW95523.1\|2827302_2827872_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
QAW95524.1\|2827986_2830782_+\|protease	Clp protease ClpC	K4FB40	Cronobacter_phage	5.2e-129	41.0
QAW95525.1\|2830781_2830979_+	hypothetical protein	NA	NA	NA	NA
QAW95526.1\|2831216_2831966_+	diguanylate cyclase	NA	NA	NA	NA
QAW95527.1\|2831952_2832915_+\|protease	Zn-dependent protease	NA	NA	NA	NA
QAW98150.1\|2834757_2836104_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
QAW95528.1\|2836315_2836798_-	N-acetyltransferase	NA	NA	NA	NA
QAW95529.1\|2836785_2837052_-	DUF1778 domain-containing protein	NA	NA	NA	NA
QAW95530.1\|2837227_2837482_-	hypothetical protein	NA	NA	NA	NA
QAW95531.1\|2837557_2837815_-	hypothetical protein	NA	NA	NA	NA
QAW95532.1\|2837863_2838067_-	transcriptional regulator	NA	NA	NA	NA
QAW95533.1\|2838100_2838469_-	hypothetical protein	NA	NA	NA	NA
QAW95534.1\|2838512_2839007_-	DNA-binding protein	NA	NA	NA	NA
QAW95535.1\|2839037_2839613_-	hypothetical protein	NA	NA	NA	NA
QAW95536.1\|2839600_2839870_-	hypothetical protein	NA	NA	NA	NA
QAW95537.1\|2840227_2840578_+	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	1.4e-23	50.9
QAW95538.1\|2840627_2840990_+	arsenical resistance operon transcriptional repressor ArsD	NA	NA	NA	NA
QAW95539.1\|2841007_2842759_+	arsenical pump-driving ATPase	NA	NA	NA	NA
QAW95540.1\|2842806_2844096_+	arsenical efflux pump membrane protein ArsB	A0A2H4J144	uncultured_Caudovirales_phage	1.9e-171	74.0
QAW95541.1\|2844108_2844534_+	arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	2.3e-52	72.9
QAW95542.1\|2844566_2845103_-	N-acetyltransferase	NA	NA	NA	NA
QAW95543.1\|2846999_2847362_-	arsenical resistance operon transcriptional repressor ArsD	NA	NA	NA	NA
QAW95544.1\|2847437_2847983_-	RNA polymerase subunit sigma-70	NA	NA	NA	NA
QAW98151.1\|2847991_2848702_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	2.9e-92	77.0
QAW95545.1\|2848701_2849028_-	transcriptional regulator	NA	NA	NA	NA
QAW95546.1\|2849359_2849857_+	N-acetyltransferase	NA	NA	NA	NA
QAW95547.1\|2849906_2850416_-	porin	NA	NA	NA	NA
QAW98152.1\|2852158_2852338_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
QAW95548.1\|2852569_2853004_-	copper-binding protein	NA	NA	NA	NA
QAW95549.1\|2853220_2854621_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	4.1e-18	26.3
QAW95550.1\|2854617_2855298_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	8.7e-30	34.4
QAW95551.1\|2855352_2856282_-	copper resistance protein D	NA	NA	NA	NA
QAW95552.1\|2856286_2856667_-	copper resistance system chaperone PcoC	NA	NA	NA	NA
QAW95553.1\|2856706_2857603_-	copper resistance protein B	NA	NA	NA	NA
QAW95554.1\|2857602_2859420_-	multicopper oxidase PcoA	NA	NA	NA	NA
QAW95555.1\|2859653_2860103_+	copper resistance protein	NA	NA	NA	NA
QAW95556.1\|2860391_2861129_+	peptidase M23	A8ATH6	Listeria_phage	3.6e-13	41.0
QAW95557.1\|2861162_2861360_-	DUF2933 domain-containing protein	NA	NA	NA	NA
QAW95558.1\|2861400_2863848_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	7.6e-84	35.8
QAW95559.1\|2863974_2864415_-	hypothetical protein	NA	NA	NA	NA
QAW95560.1\|2864501_2867648_-	CusA/CzcA family heavy metal efflux RND transporter	NA	NA	NA	NA
QAW95561.1\|2867658_2868951_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
QAW95562.1\|2869064_2869418_-	copper ABC transporter substrate-binding protein	NA	NA	NA	NA
QAW95563.1\|2869446_2870832_-	hypothetical protein	NA	NA	NA	NA
QAW95564.1\|2871021_2871702_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	2.1e-31	35.6
QAW95565.1\|2871694_2873170_+	HAMP domain-containing protein	W8CYF6	Bacillus_phage	1.0e-27	30.1
QAW95566.1\|2873420_2873852_+	silver-binding protein SilE	NA	NA	NA	NA
QAW98153.1\|2875280_2876487_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.7e-100	63.2
QAW95567.1\|2877521_2879525_+\|holin	choline transporter	A0A2I7QNT1	Vibrio_phage	9.7e-21	25.9

DBSCAN-SWA_3

2957930 : 2997620

Escherichia_phage(85.19%)

transposase,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAW95651.1\|2957930_2958209_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
QAW98161.1\|2958477_2959029_+	endonuclease	A0A1B2LRT6	Wolbachia_phage	1.1e-19	35.2
QAW95652.1\|2959349_2959628_+	replication protein	NA	NA	NA	NA
QAW98162.1\|2959844_2959922_+	RepA leader peptide Tap	NA	NA	NA	NA
QAW95653.1\|2959914_2960772_+	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
QAW98163.1\|2961076_2961265_-	hypothetical protein	NA	NA	NA	NA
QAW95654.1\|2962127_2962781_-	TetR family transcriptional regulator	NA	NA	NA	NA
QAW95655.1\|2962876_2964061_+	tetracycline efflux MFS transporter Tet(D)	NA	NA	NA	NA
QAW95656.1\|2964155_2965265_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	2.8e-33	30.2
QAW95657.1\|2965754_2966459_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAW95658.1\|2967431_2968520_-	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
QAW95659.1\|2968606_2968867_-	hypothetical protein	A0A077SK33	Escherichia_phage	1.9e-41	100.0
QAW95660.1\|2969164_2970025_+	class A extended-spectrum beta-lactamase SHV-5	A0A077SL40	Escherichia_phage	4.4e-156	99.7
QAW95661.1\|2970045_2970807_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
QAW95662.1\|2971067_2971970_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	5.3e-160	100.0
QAW95663.1\|2971981_2973175_+	hypothetical protein	A0A077SLJ7	Escherichia_phage	3.7e-209	100.0
QAW95664.1\|2973186_2973891_+\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
QAW95665.1\|2974453_2975314_-	aminoglycoside N-acetyltransferase AAC(3)-IId	NA	NA	NA	NA
QAW95666.1\|2975629_2976749_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	6.0e-52	43.2
QAW95667.1\|2977635_2978340_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAW95668.1\|2979312_2980401_-	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
QAW95669.1\|2980487_2980748_-	hypothetical protein	A0A077SK33	Escherichia_phage	1.9e-41	100.0
QAW95670.1\|2981045_2981906_+	class A extended-spectrum beta-lactamase SHV-5	A0A077SL40	Escherichia_phage	4.4e-156	99.7
QAW95671.1\|2981926_2982688_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
QAW95672.1\|2982948_2983851_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	5.3e-160	100.0
QAW95673.1\|2983862_2985056_+	hypothetical protein	A0A077SLJ7	Escherichia_phage	3.7e-209	100.0
QAW95674.1\|2985067_2985772_+\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
QAW95675.1\|2986334_2987195_-	aminoglycoside N-acetyltransferase AAC(3)-IId	NA	NA	NA	NA
QAW95676.1\|2987510_2988630_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	6.0e-52	43.2
QAW98164.1\|2989516_2990221_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAW95677.1\|2992366_2992627_-	hypothetical protein	A0A077SK33	Escherichia_phage	3.5e-40	97.7
QAW95678.1\|2992924_2993785_+	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
QAW95679.1\|2993805_2994567_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
QAW95680.1\|2994827_2995730_+	oxidoreductase	A0A077SLF7	Escherichia_phage	7.7e-159	99.3
QAW95681.1\|2995741_2997007_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.5
QAW95682.1\|2996999_2997620_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_4

3190885 : 3262382

uncultured_Caudovirales_phage(34.0%)

head,integrase,terminase,plate,protease,tail,lysis

attL 3253495:3253509|attR 3259504:3259518

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAW95865.1\|3190885_3191971_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
QAW95866.1\|3191934_3193689_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
QAW95867.1\|3195360_3198786_-	type VI secretion protein VasK	NA	NA	NA	NA
QAW95868.1\|3198769_3199909_-	hypothetical protein	NA	NA	NA	NA
QAW95869.1\|3199905_3200163_-	PAAR domain-containing protein	NA	NA	NA	NA
QAW95870.1\|3200207_3202625_-	DUF2235 domain-containing protein	NA	NA	NA	NA
QAW95871.1\|3202612_3203143_-	DUF3304 domain-containing protein	NA	NA	NA	NA
QAW95872.1\|3203210_3203741_-	DUF3304 domain-containing protein	NA	NA	NA	NA
QAW95873.1\|3203809_3204340_-	DUF3304 domain-containing protein	NA	NA	NA	NA
QAW95874.1\|3204407_3204938_-	DUF3304 domain-containing protein	NA	NA	NA	NA
QAW95875.1\|3205006_3205537_-	DUF3304 domain-containing protein	NA	NA	NA	NA
QAW95876.1\|3205600_3206380_-	DUF4123 domain-containing protein	NA	NA	NA	NA
QAW95877.1\|3206380_3208759_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	9.2e-18	33.8
QAW95878.1\|3208751_3211406_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	2.5e-96	33.4
QAW95879.1\|3211670_3212162_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
QAW95880.1\|3212166_3213873_-	hypothetical protein	NA	NA	NA	NA
QAW95881.1\|3213869_3214559_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
QAW98172.1\|3214555_3215896_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
QAW95882.1\|3215908_3217453_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
QAW95883.1\|3217495_3217987_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
QAW95884.1\|3218832_3219081_+	damage-inducible protein DinI	S5MQI1	Escherichia_phage	1.4e-25	70.4
QAW95885.1\|3219303_3219588_-	hypothetical protein	NA	NA	NA	NA
QAW95886.1\|3219692_3219902_-	hypothetical protein	NA	NA	NA	NA
QAW95887.1\|3219898_3220630_-	hypothetical protein	NA	NA	NA	NA
QAW98173.1\|3220640_3221369_-	hypothetical protein	NA	NA	NA	NA
QAW95888.1\|3223719_3223917_-	hypothetical protein	NA	NA	NA	NA
QAW95889.1\|3223916_3224783_-	hypothetical protein	A0A2H4IYR0	uncultured_Caudovirales_phage	1.9e-34	64.5
QAW95890.1\|3224782_3225556_-	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	2.8e-77	54.4
QAW95891.1\|3225552_3226749_-	hypothetical protein	A0A0M4RD32	Salmonella_phage	3.9e-158	72.9
QAW95892.1\|3226748_3227102_-	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	2.3e-50	80.3
QAW95893.1\|3227103_3227757_-	hypothetical protein	A0A2H4J8H6	uncultured_Caudovirales_phage	1.0e-59	63.5
QAW95894.1\|3227810_3228377_-	hypothetical protein	NA	NA	NA	NA
QAW95895.1\|3228413_3228599_+	hypothetical protein	NA	NA	NA	NA
QAW95896.1\|3228651_3228993_-	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	1.8e-23	46.6
QAW95897.1\|3228992_3230015_-	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	9.2e-100	54.2
QAW95898.1\|3230017_3230320_-	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	2.0e-26	55.2
QAW95899.1\|3230320_3230920_-	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	9.9e-54	57.6
QAW95900.1\|3230919_3232923_-	lytic transglycosylase	A0A2H4J9N7	uncultured_Caudovirales_phage	1.2e-247	63.6
QAW95901.1\|3232912_3233065_-	NTP pyrophosphohydrolase	A0A2H4J1A2	uncultured_Caudovirales_phage	7.6e-19	88.0
QAW95902.1\|3233100_3233526_-	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	2.6e-40	63.4
QAW95903.1\|3233529_3233970_-	DUF3277 domain-containing protein	A0A0M5M1K6	Salmonella_phage	3.3e-62	80.1
QAW95904.1\|3233980_3235126_-	hypothetical protein	A0A2H4J8G4	uncultured_Caudovirales_phage	6.3e-166	76.9
QAW95905.1\|3235129_3235570_-	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.6e-40	51.7
QAW95906.1\|3235664_3236051_-\|head,tail	head-tail adaptor	A0A2H4J1A4	uncultured_Caudovirales_phage	1.1e-48	78.2
QAW95907.1\|3236050_3236557_-	hypothetical protein	NA	NA	NA	NA
QAW95908.1\|3236553_3236973_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	3.3e-40	60.7
QAW95909.1\|3236941_3237223_-	hypothetical protein	NA	NA	NA	NA
QAW95910.1\|3237262_3238204_-	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	1.7e-137	77.1
QAW95911.1\|3238215_3238710_-	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.2e-50	62.7
QAW95912.1\|3238713_3239916_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	2.6e-106	54.1
QAW98174.1\|3239967_3240516_-	hypothetical protein	A0A0M4REK0	Salmonella_phage	3.0e-49	56.3
QAW95913.1\|3240571_3242023_-	hypothetical protein	A0A0M4S6U1	Salmonella_phage	3.8e-192	68.8
QAW95914.1\|3242260_3243661_-\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	9.4e-188	69.0
QAW95915.1\|3243611_3244364_-	hypothetical protein	A0A077KBY7	Edwardsiella_phage	4.0e-12	66.0
QAW95916.1\|3244465_3244786_-	negative regulator GrlR	NA	NA	NA	NA
QAW95917.1\|3245020_3245410_-	lipase chaperone	A0A192Y6H8	Salmonella_phage	9.4e-21	49.2
QAW95918.1\|3245406_3245937_-	lysozyme	K7PLY1	Enterobacteria_phage	2.7e-79	77.1
QAW95919.1\|3245939_3246188_-\|lysis	lysis protein	NA	NA	NA	NA
QAW95920.1\|3246593_3247376_-	antitermination protein	F1C595	Cronobacter_phage	7.2e-113	76.8
QAW95921.1\|3247372_3247849_-	hypothetical protein	A0A286N2Q1	Klebsiella_phage	1.8e-90	100.0
QAW95922.1\|3247845_3248808_-	DNA primase	A0A286N2Q0	Klebsiella_phage	4.8e-183	99.4
QAW95923.1\|3248809_3250468_-	helicase	A0A286N2P9	Klebsiella_phage	0.0e+00	96.0
QAW95924.1\|3250776_3251070_-	hypothetical protein	A0A286S2B5	Klebsiella_phage	2.8e-38	97.6
QAW98175.1\|3251044_3251266_-	XRE family transcriptional regulator	A0A286S2C1	Klebsiella_phage	3.0e-32	100.0
QAW95925.1\|3251363_3252032_+	LexA family transcriptional repressor	A0A286S2B2	Klebsiella_phage	2.4e-125	99.5
QAW95926.1\|3252202_3252517_+	hypothetical protein	A0A286S1T9	Klebsiella_phage	1.0e-49	100.0
QAW95927.1\|3252509_3252698_+	hypothetical protein	A0A286S1P8	Klebsiella_phage	4.6e-26	100.0
QAW95928.1\|3252867_3253233_+	hypothetical protein	A0A286S1Q6	Klebsiella_phage	6.9e-58	99.2
QAW95929.1\|3253225_3253480_+	hypothetical protein	A0A286SGR4	Klebsiella_phage	3.1e-41	97.6
3253495:3253509	attL	NA	NA	NA	NA
QAW95930.1\|3253666_3254092_+	hypothetical protein	A0A286S1S2	Klebsiella_phage	3.5e-53	77.9
QAW95931.1\|3254088_3254283_+	hypothetical protein	NA	NA	NA	NA
QAW95932.1\|3254279_3255107_+\|protease	serine protease	Q8W654	Enterobacteria_phage	5.5e-111	84.0
QAW95933.1\|3255211_3255730_+	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.7e-94	98.8
QAW95934.1\|3255735_3256446_+	DNA-binding protein	A0A286S260	Klebsiella_phage	2.1e-111	88.3
QAW95935.1\|3256435_3256660_+	hypothetical protein	A0A286S2B3	Klebsiella_phage	3.1e-29	89.2
QAW95936.1\|3256656_3256869_+	hypothetical protein	A0A286S2B6	Klebsiella_phage	3.4e-33	98.6
QAW95937.1\|3256865_3257345_+	hypothetical protein	NA	NA	NA	NA
QAW95938.1\|3257523_3257766_+	AlpA family transcriptional regulator	A0A0M4RTZ2	Salmonella_phage	2.2e-20	73.8
QAW95939.1\|3257746_3258928_-\|integrase	integrase	A0A0M4QX09	Salmonella_phage	5.6e-202	84.2
QAW95940.1\|3259124_3259673_+\|protease	protease	NA	NA	NA	NA
3259504:3259518	attR	NA	NA	NA	NA
QAW95941.1\|3259871_3261404_-	phosphohydrolase	A0A1B1ISR1	uncultured_Mediterranean_phage	1.1e-21	30.0
QAW95942.1\|3261620_3262382_-	3-oxoacyl-ACP reductase	Q06VL0	Trichoplusia_ni_ascovirus	2.4e-20	32.5

DBSCAN-SWA_5

3674418 : 3764322

Salmonella_phage(58.33%)

head,integrase,plate,capsid,portal,tRNA,protease,tail

attL 3729944:3729962|attR 3764397:3764415

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAW96327.1\|3674418_3675711_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	7.3e-94	44.7
QAW96328.1\|3675801_3677145_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	7.3e-81	40.8
QAW96329.1\|3677153_3677765_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
QAW96330.1\|3677887_3682141_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	5.2e-88	49.2
QAW96331.1\|3682276_3682771_-	leucine-responsive regulatory protein	NA	NA	NA	NA
QAW96332.1\|3683303_3684272_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.2e-62	44.0
QAW96333.1\|3684386_3686153_+	thiol reductant ABC exporter subunit CydD	W8CYL7	Bacillus_phage	2.3e-21	25.9
QAW96334.1\|3686153_3687875_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
QAW96335.1\|3687919_3688621_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
QAW96336.1\|3688974_3689193_+	translation initiation factor IF-1	NA	NA	NA	NA
QAW96337.1\|3689313_3691593_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
QAW96338.1\|3691623_3691941_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
QAW96339.1\|3692266_3692488_+	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
QAW96340.1\|3692442_3692625_-	hypothetical protein	NA	NA	NA	NA
QAW96341.1\|3692564_3694505_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
QAW96342.1\|3694501_3695617_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
QAW96343.1\|3695763_3697422_-	ATP-dependent endonuclease	NA	NA	NA	NA
QAW96344.1\|3697841_3698537_+	aquaporin Z	NA	NA	NA	NA
QAW96345.1\|3698652_3699552_+	hypothetical protein	NA	NA	NA	NA
QAW98191.1\|3699695_3701348_+	hydroxylamine reductase	NA	NA	NA	NA
QAW96346.1\|3701358_3702327_+	NADH oxidoreductase	NA	NA	NA	NA
QAW96347.1\|3702277_3702481_+	hypothetical protein	NA	NA	NA	NA
QAW96348.1\|3702538_3702973_-	DoxX family protein	NA	NA	NA	NA
QAW98192.1\|3703124_3704843_+	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA
QAW96349.1\|3704881_3705883_+	low-specificity L-threonine aldolase	NA	NA	NA	NA
QAW96350.1\|3705893_3707336_+	DUF2867 domain-containing protein	NA	NA	NA	NA
QAW96351.1\|3707423_3708437_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
QAW96352.1\|3708433_3709264_-	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	4.1e-05	31.6
QAW96353.1\|3709295_3710435_-	GGDEF domain-containing protein	NA	NA	NA	NA
QAW96354.1\|3710487_3710667_+	hypothetical protein	NA	NA	NA	NA
QAW96355.1\|3711312_3711828_+	lipoprotein	NA	NA	NA	NA
QAW96356.1\|3712054_3712783_+	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	1.2e-29	37.1
QAW98193.1\|3712803_3713535_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
QAW96357.1\|3713541_3714258_+	arginine transporter permease subunit ArtQ	NA	NA	NA	NA
QAW96358.1\|3714257_3714926_+	arginine transporter permease subunit ArtM	NA	NA	NA	NA
QAW96359.1\|3715109_3715841_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
QAW96360.1\|3715883_3717356_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	7.9e-28	31.8
QAW96361.1\|3717352_3718069_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	2.1e-34	36.9
QAW96362.1\|3718147_3719275_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A2K5B251	Erysipelothrix_phage	1.3e-19	25.6
QAW96363.1\|3719316_3719805_-	DUF2593 domain-containing protein	NA	NA	NA	NA
QAW96364.1\|3719862_3720708_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA
QAW96365.1\|3720704_3721658_-	putrescine ABC transporter permease	NA	NA	NA	NA
QAW98194.1\|3721668_3722802_-	polyamine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.2e-30	34.9
QAW96366.1\|3722965_3724078_-	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
QAW96367.1\|3724426_3724906_-	YbjN domain-containing protein	NA	NA	NA	NA
QAW96368.1\|3724994_3725897_-	30S ribosomal protein S6--L-glutamate ligase	A0A1D7SR78	Cyanophage	2.0e-34	35.3
QAW96369.1\|3726718_3727006_-	hypothetical protein	NA	NA	NA	NA
QAW96370.1\|3727208_3727472_+	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	1.6e-27	73.1
QAW96371.1\|3727478_3727862_-	hypothetical protein	NA	NA	NA	NA
QAW98195.1\|3728128_3729814_+	transporter	NA	NA	NA	NA
3729944:3729962	attL	NA	NA	NA	NA
QAW96372.1\|3730034_3730253_-	transcriptional regulator	Q53ZE7	Salmonella_virus	7.5e-20	69.0
QAW96373.1\|3730343_3731444_-	late control protein D	A0A1S6KZZ5	Salmonella_phage	7.1e-175	87.2
QAW96374.1\|3731440_3731926_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	4.8e-67	80.6
QAW96375.1\|3731922_3735000_-\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	62.9
QAW96376.1\|3734992_3735112_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.8e-13	87.2
QAW96377.1\|3735126_3735429_-\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	5.3e-40	89.0
QAW96378.1\|3735483_3735999_-\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	4.8e-89	94.7
QAW96379.1\|3736008_3737181_-\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	8.6e-203	90.3
QAW96380.1\|3737314_3737911_-\|tail	tail fiber assembly protein	A0A218M4J2	Erwinia_phage	3.6e-48	48.4
QAW96381.1\|3737910_3739191_-\|tail	phage tail protein	M1TAS6	Escherichia_phage	2.8e-130	52.5
QAW96382.1\|3739187_3739793_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.1e-108	91.0
QAW96383.1\|3739785_3740694_-\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	1.7e-142	90.4
QAW96384.1\|3740680_3741040_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	1.5e-52	88.2
QAW96385.1\|3741036_3741609_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	5.5e-78	72.8
QAW96386.1\|3741804_3742395_+	hypothetical protein	NA	NA	NA	NA
QAW96387.1\|3742406_3742850_-	phage virion morphogenesis protein	E5G6N4	Salmonella_phage	6.6e-55	77.9
QAW96388.1\|3742842_3743274_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	1.1e-62	81.8
QAW96389.1\|3743236_3743440_-	hypothetical protein	A0A1S6KZX6	Salmonella_phage	3.0e-23	78.5
QAW96390.1\|3743369_3743798_-	hypothetical protein	A0A1S6KZX8	Salmonella_phage	1.1e-49	80.9
QAW96391.1\|3743794_3744172_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	3.9e-16	40.0
QAW98196.1\|3744173_3744647_-	lysozyme	E5G6N1	Salmonella_phage	3.7e-80	91.0
QAW96392.1\|3744666_3744882_-	hypothetical protein	E5G6N0	Salmonella_phage	1.8e-26	80.3
QAW96393.1\|3744885_3745089_-\|tail	phage tail protein	E5G6M9	Salmonella_phage	1.4e-31	92.5
QAW96394.1\|3745088_3745553_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	6.4e-77	89.6
QAW96395.1\|3745648_3746299_-	hypothetical protein	E5G6M7	Salmonella_phage	4.3e-111	95.4
QAW96396.1\|3746302_3747361_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	2.9e-181	93.4
QAW96397.1\|3747377_3748211_-\|capsid	capsid protein	A0A1S6KZW9	Salmonella_phage	1.5e-121	91.7
QAW96398.1\|3748353_3750120_+	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	98.6
QAW96399.1\|3750119_3751163_+\|portal	phage portal protein	E5G6M3	Salmonella_phage	1.3e-170	86.4
QAW96400.1\|3751159_3751951_-	hypothetical protein	NA	NA	NA	NA
QAW96401.1\|3751962_3752340_-	ASCH domain-containing protein	NA	NA	NA	NA
QAW96402.1\|3752405_3752951_+	AAA family ATPase	NA	NA	NA	NA
QAW96403.1\|3752945_3753317_-	ASCH domain-containing protein	Q6SE87	Lactobacillus_prophage	2.6e-28	48.4
QAW96404.1\|3753294_3753876_-	hypothetical protein	NA	NA	NA	NA
QAW96405.1\|3753879_3754350_-	GNAT family N-acetyltransferase	Q6SE88	Lactobacillus_prophage	8.4e-24	42.2
QAW96406.1\|3754747_3755053_-	DinI family protein	E5G6M1	Salmonella_phage	1.1e-32	88.3
QAW98197.1\|3754991_3755180_-	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
QAW96407.1\|3755333_3757748_-	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.5
QAW96408.1\|3757744_3758602_-	DNA adenine methylase	E5G6L8	Salmonella_phage	3.5e-161	97.9
QAW96409.1\|3758598_3758826_-	hypothetical protein	E5G6L7	Salmonella_phage	2.7e-36	100.0
QAW96410.1\|3758825_3759059_-	DUF2732 domain-containing protein	E5G6L6	Salmonella_phage	9.2e-32	96.1
QAW96411.1\|3759126_3759468_-	hypothetical protein	E5G6L5	Salmonella_phage	4.3e-54	96.5
QAW96412.1\|3759431_3759632_-	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	7.1e-33	98.5
QAW96413.1\|3759639_3760149_-	hypothetical protein	E5G6L3	Salmonella_phage	1.4e-85	96.4
QAW96414.1\|3760181_3760403_-	regulator	NA	NA	NA	NA
QAW96415.1\|3760528_3761422_+	chromosome partitioning protein ParB	A0A1S6KZZ7	Salmonella_phage	1.1e-40	45.5
QAW96416.1\|3761430_3762630_+	chromosome segregation protein SMC	NA	NA	NA	NA
QAW96417.1\|3762626_3763178_+	DUF4276 domain-containing protein	NA	NA	NA	NA
QAW96418.1\|3763269_3764322_+\|integrase	integrase	A0A218M4I3	Erwinia_phage	3.6e-107	57.3
3764397:3764415	attR	NA	NA	NA	NA

DBSCAN-SWA_6

4180904 : 4256013

Escherichia_phage(23.73%)

head,integrase,terminase,coat,tRNA,transposase,tail,lysis

attL 4202645:4202691|attR 4253085:4253131

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAW96788.1\|4180904_4182422_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	9.5e-85	36.3
QAW96789.1\|4182753_4184229_-	MFS transporter	A0A0P0IY73	Acinetobacter_phage	6.9e-48	29.0
QAW96790.1\|4184288_4186436_-	lysine decarboxylase CadA	NA	NA	NA	NA
QAW96791.1\|4186518_4187853_-	lysine:cadaverine antiporter	NA	NA	NA	NA
QAW96792.1\|4188218_4189787_-	transcriptional regulator CadC	NA	NA	NA	NA
QAW96793.1\|4190079_4190352_-	DUF1471 domain-containing protein	NA	NA	NA	NA
QAW96794.1\|4190452_4191373_-	lipid A biosynthesis lauroyl acyltransferase	A0A1W6JP29	Morganella_phage	5.4e-51	40.1
QAW96795.1\|4191883_4192750_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
QAW96796.1\|4192772_4193798_-	type 1 fimbrial protein	NA	NA	NA	NA
QAW96797.1\|4193799_4196235_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
QAW96798.1\|4196245_4196941_-	fimbrial chaperone	NA	NA	NA	NA
QAW96799.1\|4196999_4197560_-	fimbrial protein	NA	NA	NA	NA
QAW96800.1\|4198031_4198694_+	LuxR family transcriptional regulator	NA	NA	NA	NA
QAW96801.1\|4198671_4198977_+	hypothetical protein	NA	NA	NA	NA
QAW96802.1\|4199029_4200334_-	citrate synthase	NA	NA	NA	NA
QAW96803.1\|4200578_4200767_+	hypothetical protein	NA	NA	NA	NA
QAW96804.1\|4200844_4201015_+	ATP-NAD kinase	NA	NA	NA	NA
QAW96805.1\|4201093_4201495_-	hydroxyisourate hydrolase	NA	NA	NA	NA
QAW96806.1\|4201890_4202184_-	hypothetical protein	NA	NA	NA	NA
4202645:4202691	attL	NA	NA	NA	NA
QAW96807.1\|4202846_4203164_-	hypothetical protein	K7PGV5	Enterobacterial_phage	3.7e-23	52.9
QAW96808.1\|4203163_4203403_-	hypothetical protein	K7P7N3	Enterobacteria_phage	6.1e-15	50.6
QAW96809.1\|4203480_4204965_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
QAW96810.1\|4204964_4205216_-	hypothetical protein	NA	NA	NA	NA
QAW96811.1\|4205417_4205627_-	hypothetical protein	NA	NA	NA	NA
QAW96812.1\|4205623_4206355_-	hypothetical protein	NA	NA	NA	NA
QAW98218.1\|4206358_4207228_-	hypothetical protein	NA	NA	NA	NA
QAW96813.1\|4209432_4211910_-\|tail	phage tail protein	F1C5A7	Cronobacter_phage	2.7e-198	45.6
QAW96814.1\|4211896_4212292_-	hypothetical protein	F1C5F2	Cronobacter_phage	8.0e-36	54.0
QAW96815.1\|4212288_4212759_-	hypothetical protein	R9TPR6	Aeromonas_phage	2.5e-28	41.0
QAW98219.1\|4212758_4213178_-	hypothetical protein	A0A2P1MXB5	Escherichia_phage	1.8e-30	48.5
QAW96816.1\|4213277_4216724_-	hypothetical protein	Q5G8W8	Enterobacteria_phage	1.4e-163	48.6
QAW96817.1\|4216816_4217320_-	hypothetical protein	NA	NA	NA	NA
QAW96818.1\|4217447_4218233_-	phage repressor protein	A0A2L1IV39	Escherichia_phage	1.9e-84	59.7
QAW96819.1\|4218298_4219012_-	hypothetical protein	H6WRU8	Salmonella_phage	3.9e-49	50.2
QAW96820.1\|4219001_4219172_-	Arc family DNA-binding protein	I6R9A8	Salmonella_phage	6.1e-17	87.0
QAW96821.1\|4219271_4219631_+	DNA-binding protein	A0A0P0ZBD1	Stx2-converting_phage	3.8e-16	47.5
QAW96822.1\|4219647_4220118_-	hypothetical protein	NA	NA	NA	NA
QAW96823.1\|4220411_4220666_-	hypothetical protein	K7PM89	Enterobacteria_phage	6.7e-20	73.0
QAW96824.1\|4220668_4221424_-	DNA-binding protein	K7PGT4	Enterobacteria_phage	2.4e-60	51.0
QAW96825.1\|4221599_4222277_-	hypothetical protein	F1C5E8	Cronobacter_phage	4.8e-73	57.9
QAW96826.1\|4222917_4224109_+\|transposase	IS3-like element ISKpn18 family transposase	U5P429	Shigella_phage	3.5e-50	43.5
QAW96827.1\|4224456_4224849_-	hypothetical protein	G0ZNE4	Cronobacter_phage	5.1e-35	52.7
QAW96828.1\|4224845_4225271_-	hypothetical protein	R9TPP7	Aeromonas_phage	5.1e-28	47.9
QAW96829.1\|4225273_4225636_-	hypothetical protein	A0A173GCE0	Salmonella_phage	1.8e-18	45.0
QAW96830.1\|4225635_4225809_-	50S ribosomal protein L13	I6R0P9	Salmonella_phage	1.4e-13	56.1
QAW96831.1\|4225808_4226189_-	hypothetical protein	F1C5E2	Cronobacter_phage	5.3e-29	55.3
QAW96832.1\|4226191_4226431_-	hypothetical protein	NA	NA	NA	NA
QAW96833.1\|4226441_4227536_-\|coat	phage coat protein	F1C5E1	Cronobacter_phage	1.7e-123	62.8
QAW96834.1\|4227547_4227976_-	hypothetical protein	F1C5E0	Cronobacter_phage	1.6e-42	60.8
QAW96835.1\|4227979_4229365_-	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	2.3e-154	60.0
QAW96836.1\|4229437_4229914_-	hypothetical protein	NA	NA	NA	NA
QAW96837.1\|4229955_4230960_-\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	9.0e-116	69.7
QAW96838.1\|4230934_4232356_-	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	9.6e-148	57.1
QAW96839.1\|4232368_4233841_-\|terminase	terminase	A0A1W6JNY3	Morganella_phage	1.3e-248	82.5
QAW96840.1\|4233840_4234443_-	hypothetical protein	G8C7P2	Escherichia_phage	5.4e-76	80.9
QAW96841.1\|4234813_4235143_+	hypothetical protein	NA	NA	NA	NA
QAW96842.1\|4235248_4235713_-\|lysis	lysis protein	Q76H63	Enterobacteria_phage	2.4e-55	73.2
QAW96843.1\|4235709_4236240_-	lysozyme	G9L6J6	Escherichia_phage	6.0e-79	78.5
QAW96844.1\|4236242_4236491_-\|lysis	lysis protein	NA	NA	NA	NA
QAW96845.1\|4237400_4238090_-	antiterminator	I6PDF8	Cronobacter_phage	1.4e-56	54.5
QAW96846.1\|4238086_4238617_-	HNH endonuclease	A0A193GYW9	Enterobacter_phage	5.2e-30	43.1
QAW96847.1\|4238743_4239379_-	NinG family protein	M9NYX8	Enterobacteria_phage	2.7e-81	77.9
QAW96848.1\|4239371_4239542_-	hypothetical protein	G8C7V4	Escherichia_phage	1.3e-14	73.2
QAW96849.1\|4239541_4239997_-	hypothetical protein	K7P7B8	Enterobacteria_phage	8.0e-56	69.5
QAW96850.1\|4240249_4240498_-	hypothetical protein	NA	NA	NA	NA
QAW96851.1\|4240497_4241145_-	DUF551 domain-containing protein	A5LH60	Enterobacteria_phage	4.5e-12	32.6
QAW96852.1\|4241317_4242160_-	addiction module toxin RelE	A0A2H4FRZ0	Salmonella_phage	1.8e-29	60.8
QAW96853.1\|4242266_4242773_-	hypothetical protein	A0A0A6Z565	Enterobacter_phage	3.0e-27	59.6
QAW96854.1\|4242769_4243063_-	protein ren	O48423	Enterobacteria_phage	3.3e-26	65.6
QAW96855.1\|4243062_4244493_-	replicative DNA helicase	Q9MCT4	Escherichia_phage	2.6e-185	66.7
QAW96856.1\|4244482_4245382_-	DNA replication protein	F1C5C3	Cronobacter_phage	5.4e-88	54.9
QAW96857.1\|4245606_4245828_-	transcriptional regulator	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
QAW96858.1\|4245868_4246102_-	transcriptional regulator	G8C7U2	Escherichia_phage	4.3e-13	50.7
QAW96859.1\|4246229_4246919_+	hypothetical protein	G8C7U1	Escherichia_phage	4.3e-61	52.2
QAW96860.1\|4247269_4247485_+	hypothetical protein	B5WZV1	Pseudomonas_phage	1.6e-09	48.6
QAW96861.1\|4247584_4247779_+	hypothetical protein	NA	NA	NA	NA
QAW96862.1\|4247867_4248152_+	hypothetical protein	G8C7T1	Escherichia_phage	8.0e-30	62.8
QAW96863.1\|4248167_4249013_+	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	6.9e-69	59.2
QAW96864.1\|4249009_4249690_+	exonuclease	A0A0M3ULE0	Salmonella_phage	7.9e-124	93.4
QAW96865.1\|4249686_4249845_+	DUF1317 domain-containing protein	A0A0N7CHV0	Escherichia_phage	3.0e-10	60.8
QAW96866.1\|4249841_4250498_+	DNA methyltransferase	G8C7S6	Escherichia_phage	2.7e-113	87.5
QAW96867.1\|4250494_4251262_+	dcm methylase	D5LH17	Escherichia_phage	1.7e-66	53.4
QAW96868.1\|4251258_4251477_+	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	1.2e-09	47.2
QAW96869.1\|4251478_4251694_+	conjugal transfer protein TraR	A0A0K2FI84	Escherichia_phage	4.0e-13	52.9
QAW96870.1\|4251907_4253071_+\|integrase	integrase	G8C7S0	Escherichia_phage	3.3e-202	87.3
QAW96871.1\|4253501_4254368_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	1.3e-30	34.8
4253085:4253131	attR	NA	NA	NA	NA
QAW96872.1\|4254369_4254582_+	ribosome-associated protein	NA	NA	NA	NA
QAW96873.1\|4254627_4256013_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.5e-46	35.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage