CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP033337	Streptococcus pyogenes strain TSPY453 chromosome, complete genome	2 crisprs	DinG,csm6,RT,cas3,DEDDh,csa3	0	1	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP033337_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033337_1

828844-829062

Orphan

II-A

Consensus_repeat	Method
TGTTTTGAATGGTCCCAAAAC	CRT

3 spacers

The CRISPR arrays of CP033337_1

>merge|CP033337|1|828844-829062|CRT
TGTTTTGAATGGTCCCAAAACGATTAGCTCAAGCATGCCTTTATAAATGTCGTTTTAGAGCTATGTTGTGTTGAATGGTCCCAAAACCAGCTTGGATTTAATAGCAGACCATGTTTTGTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAACGCACGAGTTTAACTCCCTTATTATTAGCTTGTTTTAGAGCTATGCTGTTTTGAATGGTCTCCATTC

>CP033337|1|1|828844-829062|CRT
TGTTTTGAATGGTCCCAAAAC	GATTAGCTCAAGCATGCCTTTATAAATGTCGTTTTAGAGCTATGT
TGTGTTGAATGGTCCCAAAAC	CAGCTTGGATTTAATAGCAGACCATGTTTTGTTTTAGAGCTATGT
TGTTTTGAATGGTCCCAAAAC	GCACGAGTTTAACTCCCTTATTATTAGCTTGTTTTAGAGCTATGC
TGTTTTGAATGGTCTCCATTC

Protein	Signature genes	Signature genes Name	Protein_function
CP033337.1\|QAX69193.1\|833212_833650_+\|peptide-methionine-(R)-S-oxide-reductase	unknown	unknown	gnl\|CDD\|234692
CP033337.1\|QAX69183.1\|821346_822198_+\|TIGR00159-family-protein	unknown	unknown	gnl\|CDD\|224539
CP033337.1\|QAX69185.1\|823204_824560_+\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|237670
CP033337.1\|QAX69187.1\|825387_826518_+\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
CP033337.1\|QAX69182.1\|819896_821234_-\|Mur-ligase-family-protein	unknown	unknown	gnl\|CDD\|223840
CP033337.1\|QAX69195.1\|835005_835431_+\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|225446
CP033337.1\|QAX69184.1\|822194_823151_+\|YbbR-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|227193
CP033337.1\|QAX69197.1\|835965_836775_+\|PTS-mannose/fructose/sorbose/N-acetylgalactosamine-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226238
CP033337.1\|QAX69188.1\|826527_827280_+\|acyl-[acyl-carrier-protein]-thioesterase	unknown	unknown	gnl\|CDD\|226401
CP033337.1\|QAX69192.1\|829705_831538_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
CP033337.1\|QAX69191.1\|829435_829582_+\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
CP033337.1\|QAX70275.1\|829192_829372_+\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|239876
CP033337.1\|QAX69190.1\|828043_828676_+\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
CP033337.1\|QAX69198.1\|836771_837599_+\|PTS-mannose/fructose/sorbose-transporter-family-subunit-IID	unknown	unknown	gnl\|CDD\|226239
CP033337.1\|QAX69194.1\|833779_834799_+\|putative-sulfate-exporter-family-transporter	unknown	unknown	gnl\|CDD\|225411
CP033337.1\|QAX69196.1\|835457_835949_+\|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|225976
CP033337.1\|QAX69189.1\|827279_828044_+\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
CP033337.1\|QAX69186.1\|824683_825325_+\|hypothetical-protein	unknown	unknown	unknown
CP033337.1\|QAX69199.1\|837734_839384_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
CP033337.1\|QAX69181.1\|819105_819897_-\|glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|225974

Protein	Function_ID	Function_description	E-value
CP033337.1\|QAX69183.1\|821346_822198_+\|TIGR00159-family-protein	gnl\|CDD\|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	2.09715e-101
CP033337.1\|QAX69193.1\|833212_833650_+\|peptide-methionine-(R)-S-oxide-reductase	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	2.35343e-84
CP033337.1\|QAX69187.1\|825387_826518_+\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
CP033337.1\|QAX69182.1\|819896_821234_-\|Mur-ligase-family-protein	gnl\|CDD\|223840	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane].	9.48582e-108
CP033337.1\|QAX69195.1\|835005_835431_+\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|225446	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism].	3.64459e-31
CP033337.1\|QAX69184.1\|822194_823151_+\|YbbR-like-domain-containing-protein	gnl\|CDD\|227193	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown].	1.65904e-113
CP033337.1\|QAX69197.1\|835965_836775_+\|PTS-mannose/fructose/sorbose/N-acetylgalactosamine-transporter-subunit-IIC	gnl\|CDD\|226238	COG3715, ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism].	3.81104e-76
CP033337.1\|QAX69188.1\|826527_827280_+\|acyl-[acyl-carrier-protein]-thioesterase	gnl\|CDD\|226401	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism].	9.74349e-109
CP033337.1\|QAX69192.1\|829705_831538_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
CP033337.1\|QAX69191.1\|829435_829582_+\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	3.74803e-13
CP033337.1\|QAX70275.1\|829192_829372_+\|nucleoside-diphosphate-kinase	gnl\|CDD\|239876	cd04413, NDPk_I, Nucleoside diphosphate kinase Group I (NDPk_I)-like: NDP kinase domains are present in a large family of structurally and functionally conserved proteins from bacteria to humans that generally catalyze the transfer of gamma-phosphates of a nucleoside triphosphate (NTP) donor onto a nucleoside diphosphate (NDP) acceptor through a phosphohistidine intermediate. The mammalian nm23/NDP kinase gene family can be divided into two distinct groups. The group I genes encode proteins that generally have highly homologous counterparts in other organisms and possess the classic enzymatic activity of a kinase. This group includes vertebrate NDP kinases A-D (Nm23- H1 to -H4), and its counterparts in bacteria, archea and other eukaryotes. NDP kinases exist in two different quaternary structures; all known eukaryotic enzymes are hexamers, while some bacterial enzymes are tetramers, as in Myxococcus. They possess the NDP kinase active site motif (NXXH[G/A]SD) and the nine residues that are most essential for catalysis.	1.77088e-05
CP033337.1\|QAX69190.1\|828043_828676_+\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	2.38885e-87
CP033337.1\|QAX69198.1\|836771_837599_+\|PTS-mannose/fructose/sorbose-transporter-family-subunit-IID	gnl\|CDD\|226239	COG3716, ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID [Carbohydrate transport and metabolism].	1.55707e-109
CP033337.1\|QAX69194.1\|833779_834799_+\|putative-sulfate-exporter-family-transporter	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	6.6919e-100
CP033337.1\|QAX69196.1\|835457_835949_+\|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB	gnl\|CDD\|225976	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism].	2.00329e-54
CP033337.1\|QAX69189.1\|827279_828044_+\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	6.49715e-128
CP033337.1\|QAX69185.1\|823204_824560_+\|phosphoglucosamine-mutase	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
CP033337.1\|QAX69199.1\|837734_839384_+\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	1.69316e-77
CP033337.1\|QAX69181.1\|819105_819897_-\|glutamine-amidotransferase	gnl\|CDD\|225974	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only].	6.74846e-142

>CP033337.1|QAX69190.1|828043_828676_+|TIGR01906-family-membrane-protein
MVENTKLLCSWVWLLALAILITIYSTWLWYPLEVDHLKLEQVVFMSKDAILHNYNGLLNYLTNPFVTRLEFANFHSSADGLKHFADVKWLFHLTQVVFLGLLYPTLKTFTQRLKTKRFWLLQKPLILAALFPLMIGLMASFIGFEHFFTLFHKVLFVGDSSWLFDPLKDPVIWILPEVFFLHCFLFFMIVYEIILWSLVGLARRQRLNVE
>CP033337.1|QAX69189.1|827279_828044_+|TIGR01457-family-HAD-type-hydrolase
MPYKGYLIDLDGTIYQGKNRIPAGERFIKRLQERGIPYLLVTNNTTRTPEMVQSMLAKQFHVETGIETIYTATMATVDYMNDMNRGKTAYVIGETGLKSAIAAAGYVEELENPAYVVVGLDSQVTYEMLAIATLAIQKGALFIGTNPDLNIPTERGLMPGAGALNALLEAATRVKPVFIGKPNAIIMNKSLEVLGIQRSEAVMVGDNYLTDIMAGIQNDIATILVTTGFTRPEEVPTLPIQPDHVLSSLDEWRL
>CP033337.1|QAX69188.1|826527_827280_+|acyl-[acyl-carrier-protein]-thioesterase
MGLSYQEELTLPFELCDVKSDIKLPLLLDYCLMVSGRQSAQLGRSNNNILVDYKLVWIVTDYEITIHRLPHFQETITIETKALSYNKFFCYRQFYIYDQEGCLLVDILSYFALLNPDTRKVATIPEDLVAPFKTDFVKKLHRVPKMPLLEQSIDRDYYVRYFDIDMNGHVNNSKYLDWMYDVLGCAFLKTHQPLKMTLKYVKEVSPGGQITSSYHLDQLTSYHQITSDGQLNAQAMIEWRAIKQTESETD
>CP033337.1|QAX69187.1|825387_826518_+|oxygen-independent-coproporphyrinogen-III-oxidase
MSKKPTSAYVHIPFCTQICYYCDFSKVFIQNQPVDAYLKALIQEFYSYGIRDLKTLYIGGGTPTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRISLGVQTFNNKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLDQVKENVAKALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPIQHYLKAVEAGNARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGVSFEERYGNIVRELQNQGLLVKDDAFVRMTKKGLFLGDSVAERFILD
>CP033337.1|QAX69186.1|824683_825325_+|hypothetical-protein
MTKQQIEKLADLLPPFAATLYLDMIPEFQEGYASYVYQTPKQDIQKRRIKQLTKNFERLLDTPSFYVMPVTRKTAEQLLADKGLAYHLLSTVAANQVFAAAVNEDQTLFQVLRNGARVAFVILQEKGEFLEMTLGILETVTENEVPAAIVEAVQTYLLADMQEKLPSLSIMVSQESSKLFYQEQGFVLLAKGCKPGNENDSDVCQLVKYFSKP
>CP033337.1|QAX69185.1|823204_824560_+|phosphoglucosamine-mutase
MGKYFGTDGVRGEANVELTPELAFQLGRFGGYVLSQHETERPKVFVARDTRISGEMLESALIAGLLSVGIEVYKLGVLATPGVSYLVRTEKASAGVMISASHNPALDNGIKFFGNDGFKLADDQELEIEALLDAPEDTLPRPSAEGLGTLVDYPEGLRKYEKFLVTTGTDLSGMTVALDTANGAASVSARDVFLDLNAEIAVIGEKPNGLNINDGVGSTHPEQLQELVKETGADLGLAFDGDSDRLIAVDETGEIVDGDRIMFIIGKYLSEKGLLAHNTIVTTVMSNLGFHKALDKQGINKAITAVGDRYVVEEMRSSGYNLGGEQSGHVIIMDYNTTGDGQLTAIQLAKVMKETGKSLSELAAEVTIYPQKLVNIRVENSMKERAMEVPAIANIIAKMEDEMAGNGRILVRPSGTEPLLRVMAEAPTDAEVDYYVDTIADVVRTEIGCDN
>CP033337.1|QAX69184.1|822194_823151_+|YbbR-like-domain-containing-protein
MKRFLNSRPWLGMVSVFFAILLFLTAASSNHNNSSSQIYSPIETYTHSLKDVPIDMKYDSDKYFISGYSYGAEVYLTSTNRIKLDSEVNNDTRNFKIVADLTHSHPGTVNVNLRVENLPSGVTATVSPDKISVTIGKKESKVFPVRGSVDAKQIANGYEISKIETGVDKVEVTSDESTIALIDHVVAKLPDDQVLDRNYSSRVTLQAVSADGTILASAIDPAKTNLSVAVKKITKSVPIRVEAVGMMDDSLSDIQYKLSKQTAVISGSREVLEDIDEIIAEVNISDVTKNTSKTVSLSSSQVSIEPSVVTVQLTTTKK
>CP033337.1|QAX69183.1|821346_822198_+|TIGR00159-family-protein
MNNLSSIDIKFLLSLFADPWLLAVHLLDILIVAYLIYRFIKALTGTKIMSLVQGVIFFLVLRFIAEWIGFTTITYLMNQVITYGVIAGVVIFTPEIRAGLEKFGRSTQVFLQKQYVSSESALVDALIKSVAYMGPRKIGALIAIEQTQTLQEYIATGIPLNADISSQLLINIFIPNTPLHDGAVIVGQNKIVAACAYLPLSESKAISKEFGTRHRAAIGLSENSDALTIIVSEETGAISVTRKGQFLHDLSTDEFETVLRTYLMSDSNVTLPWYKKILGGKSK
>CP033337.1|QAX69182.1|819896_821234_-|Mur-ligase-family-protein
MKTLLGIIAGKAAQSILTKLGRGSTYPGRLALACNKDILKDLSKDYDIVVVTGTNGKTLTTALTVGILKEAFGEIITNPSGANMITGITSTFLAAKKGKSGRQIAVLEIDEASLPRITTYLKPSLFVYTNIFRDQMDRYGEIYTTYQMIVDGARNAPKATILANGDSPIFSSKDIVNPVQYYGFDTAKHAPQLAHYNTEGILCPKCEHILQYRLNTYANLGDFICLNCGFKRPQLDYRLTELTTITNHSSEFIIDGQDYKINVGGLYNIYNALAAVSVAEFFDVSPEKIKAGFNKSKAVFGRQETFTIGDKSCTLILIKNPVGASQALEMIQLADYPFSLSVLLNANYADGIDTSWIWDANFELITQMPITEINAGGVRHSEIARRLRVTGFDDTKIKQAEKLEQIIETIEKQEAKHAYILATYTAMLEFRSLLADRHVVEKEMI
>CP033337.1|QAX69181.1|819105_819897_-|glutamine-amidotransferase
MTYTSLKSPENQDYIYDLTIAHLYGNLMNTYGDNGNILMLKYVAEKLGARVTVDIVSINDTFEQDDYDIVFFGGGQDYEQSIVAKDLPSKKAALADYIANNKVVLAICGGFQLLGQYYVQANGVKIDGLGIMGHYTLNQHQNRFIGDIKIHNDEFNETYYGFENHQGRTFLSGDEKPLGRVVYGNGNNKEDQTEGVHYKNVYGSYFHGPILSRNVNLAYRLVTTALKKKYGSAISLSSYDDILKQEITEEYADLKSKASFNKV
>CP033337.1|QAX70275.1|829192_829372_+|nucleoside-diphosphate-kinase
MIKPDGVKQGEVVGEVLRWIERLRFTFKRFELRQASSKYLAKHDEALVINLLILNLKLT
>CP033337.1|QAX69191.1|829435_829582_+|nucleoside-diphosphate-kinase
MMRVTNPTDALCGTIRGNFAQAPGDDGGVFNMVHRSHSRDSARREIAL
>CP033337.1|QAX69192.1|829705_831538_+|elongation-factor-4
MNSQDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRHEVEDVIGLDTSEAVLASAKAGIGIEEILEQIVEKVPAPTGDVDAPLQALIFDSVYDAYRGVILQVRIVNGIVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYVAASIKTVADTRVGDTVTLANNPAKEALHGYKQMNPMVFAGIYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVHTTDEDMIEVSNPSEFPDPTRVAFIEEPYVKAQIMVPQEFVGAVMELSQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYDMSEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKIIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDTKK
>CP033337.1|QAX69193.1|833212_833650_+|peptide-methionine-(R)-S-oxide-reductase
METSDELKQRIGDLSYEVTQHAATESPFTGKYDDFFEKGIYVDIVSGEVLFSSLDKFNSGCGWPAFSKPIENRMVTNHDDSSYGMRRIEVKSREAGSHLGHVFSDGPKEAGGLRYCINSAALKFIPYDQMEKEGYAQWLTLFDET
>CP033337.1|QAX69194.1|833779_834799_+|putative-sulfate-exporter-family-transporter
MSTHLRKLPGLLLCLLLALSAWYLGRLFPIIGAPVFAILLGMLLALFYEHGDKTKEGISFTSKCILQTAVVLLGFGLNLTQVMAVGMQSLPIIISTIATALLVAYGSQKWLRLDVNTATLVGIGSSICGGSAIAATAPVIKAKDDEVAKAISVIFLFNMLAALLFPSLGQLIGLSNEGFATFAGTAVNDTSSVTATATAWDAIHHSNTLDGATIVKLTRTLAILPITLGLSLYQAKKEHDIVTEEGFSLRKSFPRFILFFLLASLITTLMTSLGVSADSFHSLKTLSKFFIVMAMAAIGLNTNLVKLIKTGGQAILLGAICWVAITLVSLAMQLSLGIW
>CP033337.1|QAX69195.1|835005_835431_+|PTS-sugar-transporter-subunit-IIA
MKRKFLIGSHGRLASGLQSSIDILAGMGQALETIDAYVDDSDYTSQIDDFIAGVAADEQGLIFTDLLGGSVNQKMVTAVMNSGKDNIFLITNSNLATLLSLVFLKPGEALTKDEIVTVINESQVQLVDLVPETNSEDDFFD
>CP033337.1|QAX69196.1|835457_835949_+|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB
MITQIRVDDRLIHGQVAVVWTKELNAPLLVVANDEAAKNEITQMTLKMAVPNGMKLLIRSVEDSIKLFNDPRAKDKRIFVIVNSVKDACAIAKEVPDLEAVNVANVGRFDKSDPASKVKVTPSLLLNPEEMAAAKELVSLPELDVFNQVLPSNTKVHLSQLVN
>CP033337.1|QAX69197.1|835965_836775_+|PTS-mannose/fructose/sorbose/N-acetylgalactosamine-transporter-subunit-IIC
MLVPATMAALAVLICFGGNYLTGQSMMERPLVVGLVTGLLLGDMKVGILMGASLEALFLGNVNIGGVIAAEPVTATAMATTFTIISHIDQKAAMTLAVPIGMLAAFVVMFLKNVFMNIFAPMVDKAAAANHQGKLVMLHYGTWIIYYLIIASISFIGILVGSGPVNAFVEHIPQNLMNGLSAAGGLLPAVGFAMLMKLLWTNKLAVFYLLGFVLTAYLKLPAVAVAALGAVICVISSQRDLELDAITRGAISKQTTFDSKESEEEDFFA
>CP033337.1|QAX69198.1|836771_837599_+|PTS-mannose/fructose/sorbose-transporter-family-subunit-IID
MTSQDNLTKEDRKMLRSVFWRSWTMNASRTGATQYHAVGVIYTLLPVINRFYKTDKDKAEALVRHTTWFNATMHINNFIMGLVASMEKKNSEDPDFDASAITAVKASLMGPISGVGDSFFWGILRVIAAGIGISLASAGSAMGAVVFLLLYNIPAFIIHYYSLYGGYSVGAGFIKKLYESGGIKIVTKTSSMLGLMMVGSMTASNVKFKTILTVAAKGAKEAASIQDYLDQLFIGIVPLMVTLAAFWLLRKKVNINWIMFGIMFLGIILGLLGIC
>CP033337.1|QAX69199.1|837734_839384_+|sensor-histidine-kinase
MRGEQVEEHFKKQLQDDISRHFSYQSLMLSLLLIGLFIIFSLAPQQLGLYRDINATATRYHRLISKQEALLDELGKNSLLPFLNKNLSTADLSKHYFHLRHSSQTSPELLLFSPSQGLLFASNPHLGNVFSKSVYIQEVLRAAHPPKTLFKVAMDSEDGHYLMIIKPMIDQNQLKGYAFLVMSGKDFLHPTKTLTSELVIADKLDNTFTFSNREFIASSLDKINSQYLHHYFVFQDNRAFITRKVALQGGLWLYMYRPLIPMVSVMLFSLISSAVIFVILQRKSSGLANRIAAKNSRAINQMVRDMSAISRQEKRRIDLESQDEFQYLSDQINQMVERLQQLHDKTLDLETQKLLFEKRMLEAQFNPHFLYNTLETILITSHYDSALTEKIVIQLTKLLRYSLTDSSKPVLLKDDLSVIESYLVINQVRFEELQYSINLSPDLDSLAVPKLFLLPLIENAIKYGLKERHDVKINIACYYQDDHIIFSVRDNGSGIDAHHQKVIREQLEAGESHHGLINSYRRLKYHFSEVSLVFDQGDKQFNVSYHVKE

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Crispr_ID: CP033337_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033337_2

1338880-1338973

Unclear

Consensus_repeat	Method
AATCCACTCACCCGTGAAGGGTGAGAC	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of CP033337_2

>merge|CP033337|2|1338880-1338973|CRISPRCasFinder
AATCCACTCACCCGTGAAGGGTGAGACCTAGTGGCTATGCGGAGTTACTTATCCAACTGATTATTTTAATCCACTCACCCGTGAAGGGTGAGAC

>CP033337|2|1|1338880-1338973|CRISPRCasFinder
AATCCACTCACCCGTGAAGGGTGAGAC	CTAGTGGCTATGCGGAGTTACTTATCCAACTGATTATTTT
AATCCACTCACCCGTGAAGGGTGAGAC

Protein	Signature genes	Signature genes Name	Protein_function
CP033337.1\|QAX69667.1\|1339323_1340571_-\|CRISPR-associated-endonuclease-Cas3''	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP033337.1\|QAX69656.1\|1328148_1328829_-\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
CP033337.1\|QAX69664.1\|1336766_1337699_-\|magnesium-transporter-CorA-family-protein	unknown	unknown	gnl\|CDD\|213361
CP033337.1\|QAX69657.1\|1328970_1329444_+\|arginine-regulator	unknown	unknown	gnl\|CDD\|224355
CP033337.1\|QAX69673.1\|1345518_1346058_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
CP033337.1\|QAX69669.1\|1343374_1343938_-\|shikimate-kinase	unknown	unknown	gnl\|CDD\|379082
CP033337.1\|QAX69674.1\|1346374_1346647_-\|hypothetical-protein	unknown	unknown	unknown
CP033337.1\|QAX69658.1\|1330340_1331420_-\|MmcQ/YjbR-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|225197
CP033337.1\|QAX69662.1\|1335199_1335823_-\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
CP033337.1\|QAX69665.1\|1337790_1338750_-\|gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
CP033337.1\|QAX69663.1\|1335835_1336546_-\|cytochrome-c-biogenesis-protein-CcdA	unknown	unknown	gnl\|CDD\|223856
CP033337.1\|QAX69666.1\|1339121_1339301_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224262
CP033337.1\|QAX69672.1\|1344951_1345206_-\|DUF1912-family-protein	unknown	unknown	gnl\|CDD\|286073
CP033337.1\|QAX69670.1\|1343934_1344135_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
CP033337.1\|QAX69660.1\|1333222_1333963_-\|response-regulator	unknown	unknown	gnl\|CDD\|227095
CP033337.1\|QAX69675.1\|1346696_1347023_-\|DUF771-domain-containing-protein	unknown	unknown	gnl\|CDD\|368511
CP033337.1\|QAX69668.1\|1340724_1343373_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
CP033337.1\|QAX69671.1\|1344538_1344934_-\|helix-hairpin-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|181104
CP033337.1\|QAX69661.1\|1334050_1335157_-\|peptide-methionine-(R)-S-oxide-reductase	unknown	unknown	gnl\|CDD\|184456
CP033337.1\|QAX69659.1\|1331492_1333226_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519

Protein	Function_ID	Function_description	E-value
CP033337.1\|QAX69667.1\|1339323_1340571_-\|CRISPR-associated-endonuclease-Cas3''	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	5.35517e-59
CP033337.1\|QAX69656.1\|1328148_1328829_-\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	3.96742e-40
CP033337.1\|QAX69664.1\|1336766_1337699_-\|magnesium-transporter-CorA-family-protein	gnl\|CDD\|213361	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family. A uncharacterized subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB (EcCorA-ZntB_like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes.The EcCorA-ZntB-like family includes the Mg2+ transporters Escherichia coli and Salmonella typhimurium CorAs, which can also transport Co2+, and Ni2+. Structures of the intracellular domain of EcCorA-ZntB-like family members, Vibrio parahaemolyticus and Salmonella typhimurium ZntB, form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.	1.35313e-79
CP033337.1\|QAX69657.1\|1328970_1329444_+\|arginine-regulator	gnl\|CDD\|224355	COG1438, ArgR, Arginine repressor [Transcription].	2.68589e-66
CP033337.1\|QAX69673.1\|1345518_1346058_-\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	5.22287e-31
CP033337.1\|QAX69669.1\|1343374_1343938_-\|shikimate-kinase	gnl\|CDD\|379082	pfam13238, AAA_18, AAA domain.	0.00452424
CP033337.1\|QAX69658.1\|1330340_1331420_-\|MmcQ/YjbR-family-DNA-binding-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	2.00918e-35
CP033337.1\|QAX69662.1\|1335199_1335823_-\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.7195e-35
CP033337.1\|QAX69665.1\|1337790_1338750_-\|gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	4.87701e-56
CP033337.1\|QAX69663.1\|1335835_1336546_-\|cytochrome-c-biogenesis-protein-CcdA	gnl\|CDD\|223856	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones].	6.4437e-43
CP033337.1\|QAX69666.1\|1339121_1339301_-\|hypothetical-protein	gnl\|CDD\|224262	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms].	1.03564e-06
CP033337.1\|QAX69672.1\|1344951_1345206_-\|DUF1912-family-protein	gnl\|CDD\|286073	pfam08930, DUF1912, Domain of unknown function (DUF1912). This domain has no known function. It is found in various Streptococcal proteins.	3.74168e-47
CP033337.1\|QAX69670.1\|1343934_1344135_-\|N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	2.77275e-13
CP033337.1\|QAX69660.1\|1333222_1333963_-\|response-regulator	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	1.85886e-83
CP033337.1\|QAX69675.1\|1346696_1347023_-\|DUF771-domain-containing-protein	gnl\|CDD\|368511	pfam05595, DUF771, Domain of unknown function (DUF771). Family of uncharacterized ORFs found in Bacteriophage and Lactococcus lactis.	6.85209e-27
CP033337.1\|QAX69668.1\|1340724_1343373_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
CP033337.1\|QAX69671.1\|1344538_1344934_-\|helix-hairpin-helix-domain-containing-protein	gnl\|CDD\|181104	PRK07758, PRK07758, hypothetical protein; Provisional.	0.000143012
CP033337.1\|QAX69661.1\|1334050_1335157_-\|peptide-methionine-(R)-S-oxide-reductase	gnl\|CDD\|184456	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB.	2.3863e-163
CP033337.1\|QAX69659.1\|1331492_1333226_-\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	2.08305e-64

>CP033337.1|QAX69665.1|1337790_1338750_-|gfo/Idh/MocA-family-oxidoreductase
MAKVRYGIVSTAQVAPRFIEGVRLAGNGEVVAVSSRSLDKAKAFAAAHQLPKAYGSLDDMLLDASIDAIYVASINQDHFPAAKKALLAGKHVLVEKPFTLTAAQAEELFALAQERGLFLMEAQKAVFIPMTQRLKGLIAAVELGDIVSVSSTTAYPNIDHVTWFRDLEKGGGTVHFMAPYALSYLPYLFDADIVSASGVAHFPKGQSDSQSKLVLTLSNGVLVDIFLTTHLSLPHELVIYGTKGRLEIPHFWKNTHATLVRPDGSRSVIEAIMSSDFEAEAHHVSQMILEGQLTSPVMTKSLTLSGVGLIEKLYRSWGK
>CP033337.1|QAX69664.1|1336766_1337699_-|magnesium-transporter-CorA-family-protein
MPTLPKASSAITLINLDQLTEHDQEALVSEGLIDAEVFDYAKDKNETSFMEENKEKLTIVFQILDRQEEAYHPNYIPRVIPITLFLNDQSLYILGHDHSLTLIEEVFPDLDESRSPRHLVFQLLTAFTKQYVPLMDEIAQQRDKLIEALRQKANKTNLESLANLQSGTVYILMGSKQNEQMLAELKDMPGQQDLEEDEAEQLRDAIIEARQLSNMCDLNTRVLKEISSSYNNVLSNNLNNNVTSLTIFSIGISIIAMVTSFYGMNVKLPFAKVDSVWFWIVLTTSLVALLIMVVMYWYVHKRNRNASKRI
>CP033337.1|QAX69663.1|1335835_1336546_-|cytochrome-c-biogenesis-protein-CcdA
MTLSLVLMVSVFGAGLLSFFSPCIFPVLPVYLGILLDADDSKTITIFDKKLYWYGIVKTLAFIFGLSTIFVILGYGAGFLGNILYAVWFRYLLGALVIILGIHQMGLITIKSLQFQKSLTFHNNKNRNGLFNAFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLMIIYTLGLGIPFLLISFASGIVLKQFNKLKPHILLLKKVGGVLIIVMGILLMTGTLNNLAQLFG
>CP033337.1|QAX69662.1|1335199_1335823_-|TlpA-family-protein-disulfide-reductase
MKKGLLVTTGLACLGLLTACSTQDNMAKKEITQDKMSMAAKKKDKMSTSKDKSMMTDKSSDKKMTNDGPMAPDFELKGIDGKTYRLSEFKGKKVYLKFWASWCSICLSTLADTEDLAKMSDKDYVVLTVVSPGHQGEKSEADFKKWFQGTDYKDLPVLLDPDGKLLEAYGVRSYPTEVFIGSDGVLAKKHIGYAKKSDIKKTLKGIH
>CP033337.1|QAX69661.1|1334050_1335157_-|peptide-methionine-(R)-S-oxide-reductase
MEHKWKLWLFIVGVVLLIGGASVLIQKGQAKAFSQGKPQLPAKKVKSTKVDPNAPVDQKMIYLAGGCFWGVEEYFSQVDGVLDAVSGYANGRGDTTNYQLIHQTGHAETVEVTYDANRISLKELLLHFFRIIDPTSLNKQGNDRGSQYRTGIYYTDKADLAIIDEVFKEKAKDYKKKIVVEKAPLKHFIKAEDYHQDYLKKNPNGYCHIDINQATYPVIDESKYPKPSATEIKAKLSADEYRVTQKNETEKAFSNRYWDSFDAGIYVDVVTGEPLFSSKDKFESGCGWPSFSRPISPDVVRYKEDKSFNMTRTEVRSRSGNSHLGHVFTDGPKDQGGLRYCINSLSITFIPKADMEAKGYGYLLSSVE
>CP033337.1|QAX69660.1|1333222_1333963_-|response-regulator
MYSLLIVEDEYLVRQGIRSLVDFSQFKIDRVNEAENGQLAWDLFQKEPYDIVLTDINMPKLNGIQLAELIKQESPQTHLVFLTGYDDFNYALSALKLGADDYLLKPFSKADVEDMLGKLRKKLELSKKTETIQELVEQPQKEVSAIAMAIHERLADSDLTLKSLAQQLGFSPNYLSVLIKKDLGMPFQDYLVQERLKKAKLLLLTSNLKIYEIAEQVGFEDMNYFSQRFKQLVGVTPSQYKKGGQA
>CP033337.1|QAX69659.1|1331492_1333226_-|sensor-histidine-kinase
MKRYPLLVQLISYVFVIVIALITTLGLLYYQTSSRNIRQLIERDTRQSIRQSSQFIDAYIKPLKETTSVLAKNTEIQAFASQIHQENDKQVLQLMKMVLATNSDLQAAVLVTKDGRTVSTNSQLTMKTSSDMMAEPWYKAAIDRQAMPVLTPARQLSLSSKKEWVVSVTQEVVDRAGHNLGVLRLDIAYPTIKASLDQLQLGRQGFAFIVNDKHEFVYHPKKSVYSSSKEMAAMKPYLAIQNGYTKDKTSFVYQKLIPNSQWTLVGVASLDQLHRVQRQIFWSFLGTGLLACLICGFATVLALRRWIRPIQQLQQVILAIQKGDRQLRAQETGSPELTDLAQQFNALLDQIDSLMVAVADKEKAIGQYRLQALASQINPHFLYNTLDTIIWMAEFNDSKRVVEVTKSLAKYFRLALNQGNEYIRLADELDHVSQYLFIQKQRYGDKLSYEVQGLDVYADFVIPKLILQPLVENAIYHGIKEVDRKGMIKVTVSDTAQHLVLTVWDNGKGIEDSSLTNSQSLLTRGGVGLKNVDQRLKLHYGEGYHMTIHSQSDQFTEIQLSLPKMHELMADDTQENE
>CP033337.1|QAX69658.1|1330340_1331420_-|MmcQ/YjbR-family-DNA-binding-protein
MSLASDYFSRQTPIVEKLMAYGFEKRNNGYFYNERFMEEEFEAQLRIDEAGNIWDRVIDCDLEEDYLPLQQAAWQGTYTGQVRAAYLELLERLSVACFEVTPFQSMQANRLAKHITKEWSDPMDYPFEKHPDLATYRVGGKWYAMIFSLLADKLDQIPERLVGQTCEVMTVKVNPKDFPQLLQQEGIYPAYHMSKKNWISIILDDKVTDDKLWTLVTQSRQLVNPNGLSNPNGPDYWVIPANLKYYDIDAEFAANDVILWTQKAGIAVGDYVLIYITAPVKSIRYVCQVLETDIPNEGYRKNPNIDKLMRLRKCQQYEDGLLSFDLMKEHGVAAVRGPRRLSPQLIAFLKEKEYFKENN
>CP033337.1|QAX69657.1|1328970_1329444_+|arginine-regulator
MNKKETRHQLIRSLISETTIHTQQELQERLQKNGITITQATLSRDMKELNLVKVTSGNDTHYEALAISQTRWEHRLRFYMEDALVMLKIVQHQIILKTLPGLAQSFGSILDAMQIPEIVATVCGDDTCLIVCEDNEQAKACYETLSHYTPPFFFSNK
>CP033337.1|QAX69656.1|1328148_1328829_-|Crp/Fnr-family-transcriptional-regulator
MIRREDYQYLRKLNDFRYFSIEQFDKIVGQMEFRKAKKDHILFFEGDKRDKLFLVISGYFKVEQSDQSGTFMYTDFIRHGTIFPYGGLFTDDYYHFSVVAMTDVTYFYFPVDLFEDYSLENRLQMKHLYSKMSKLLELHELRVRNLITSSASSRVIQSLAILLVEMGKDSDTLPFQLTTTDIAQISGTTRETVSHVLRDLKKQELITIKGKYLTYLDKDYFLQYTK
>CP033337.1|QAX69666.1|1339121_1339301_-|hypothetical-protein
MSFKTDCNTQSFVYFYSIHPIDGETDSIRFYLLGKNWQRRVETLGRSDSYDPDKGVLLL
>CP033337.1|QAX69667.1|1339323_1340571_-|CRISPR-associated-endonuclease-Cas3''
MRMILAHYDCKKDKKQSLDEHLWHVACSSRQEASIIGQGDVLFLIGLYHDLGKADRTFQDKLLNNPNRHVDHSYAGAKYLCSIIGPHLKNRGVDKNERMTFNEIVGYVISAHHGMYDLCYYFDDAEYYGFNKFKNRINRDLDGYHYHEDIKGYALKLEKKLCDYGYKDLRELIDKAFDNYQQAMSSLNWQDKSEWDYYQSCMVRLYLSLLKNADILDTVNAYGLKISPMDKTERSFLKHSYLAAIEQKYASFGQPNNQLNTIRTEIAERVKERGKRDSKGIYRLDLPTGAGKTNLSMRYAFHQLVHHDKSRFFYITPFLSVLEQNASEIRKVTGDLGVLEHHSNVVKQVNEDDDDKDSLLSAYLSDSWDSQVVLTSMVQFFQTLFKTKSANLRRFSSLIKVDKRLFEFFIVAFNC
>CP033337.1|QAX69668.1|1340724_1343373_-|valine--tRNA-ligase
MTELSPKYNPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLREQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQVATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIVNKLIPIVGDEHADPEFGTGVVKITPAHDPNDFEVGQRHNLPQVNVMNDDGTMNELAGDFAGMDRFEARQATVAKLEELGALVNIEKRVHSVGHSERSGAVVEPRLSTQWFVKMDELAKQAMDNQETDNRVDFYPPRFNDTFLQWMENVHDWVISRQLWWGHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNEGLTLEEAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQYAQGSIVTVDYPVVRPAFENEAAHKGVESLKDLIRAVRNARAEVNVAPSKPITILVKTADSELEDFFTSNVNYIKRFTNPEKLEISSAIAAPELAMTSIITGAEIYLPLADLLNVEEELARLDKELAKWQKELDMVGKKLGNERFVANAKPEVVQKEKDKQADYQAKYDATQERIAEMKKIKS
>CP033337.1|QAX69669.1|1343374_1343938_-|shikimate-kinase
MNLIIIGAQASGKMTIGQEVARQTGMTLFHNHDSIDFVLRFMPWSQESTALIERIRFAFFETFAKTGQDMIFTIVIDFNDPNDVAMLEKIQAVFQSYDQEVLFVELKTDIEERLKRNRTENRLKHKPLKRNIEWSEQDIQSTMAYAVFNPEEPPKTLTHYQKINNTHLTAAETAQLIIQKMTHIKEN
>CP033337.1|QAX69670.1|1343934_1344135_-|N-acetyltransferase
MGFTLLDLHKIELGCYDYNKQSQAVARKLGFTLEANARDRKDVQGRRCGDMRFGLLRSEWEEQKQK
>CP033337.1|QAX69671.1|1344538_1344934_-|helix-hairpin-helix-domain-containing-protein
MAKQKNRKKALKLEMKRNGLLKKAGQVFDKAVESVETAVDKTISAGKNLVEKDSQTVENLTASKERLTLDEFAGQPVVAGIRSDLVETLYAEGIHSAQAFKEWTEKDLLALKGIGPATVKKLVENGASFKK
>CP033337.1|QAX69672.1|1344951_1345206_-|DUF1912-family-protein
MSYEKEFLKDFEDWVKTQIQVNQLAMATSQEVAQEDGDERAKDAFIRYESKLDAYEFLLGKFDNYKNGKAFHDIPDELFGARHY
>CP033337.1|QAX69673.1|1345518_1346058_-|site-specific-integrase
MLQTGFRFGEAMAITWDDIDFERNSIYTYRRYSSIKKDFTKPKTRTSIRRVPVSHDLKELLLELKFQQERMLRGLHIKNTDQLIFYDYRFGMISNNAVNKFLASSLEKLEIESKMSSTGARHTYGSYLLANGVDIWAVAKLMGHKDIKQLIETYGHLLLEVEEKENDQLLKILNNKGSF
>CP033337.1|QAX69674.1|1346374_1346647_-|hypothetical-protein
MATYRQRGKKKLWDYRVYGKDGKLIASGSGFRTKKEASYEALKIEQKKYYSDVINSNATLFEMWQIWYDLVVEPSELDILTKQNIKPEER
>CP033337.1|QAX69675.1|1346696_1347023_-|DUF771-domain-containing-protein
MQQVFNVSVPVPDDVVIISKEEYLDLLSDNEQGKWWDIDNLQELLGLGRSKLINDILLNPDIKKEVDLSINPNGFIVYPRGKGSRYKILATRARKYFEENFGSILLNN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP033337_2	2.1\|1338907\|40\|CP033337\|CRISPRCasFinder	1338907-1338946	40	MK448679	Streptococcus phage Javan137, complete genome	35066-35105	8	0.8
CP033337_2	2.1\|1338907\|40\|CP033337\|CRISPRCasFinder	1338907-1338946	40	MK448950	Streptococcus phage Javan464, complete genome	37224-37263	9	0.775

1. spacer 2.1|1338907|40|CP033337|CRISPRCasFinder matches to MK448679 (Streptococcus phage Javan137, complete genome) position: , mismatch: 8, identity: 0.8

ctagtggctatgcggagttacttatccaactgattatttt	CRISPR spacer
ctagtggctatgcggagttacttatccaaattatcgagga	Protospacer
***************************** * **..

2. spacer 2.1|1338907|40|CP033337|CRISPRCasFinder matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 9, identity: 0.775

ctagtggctatgcggagttacttatccaactgattatttt	CRISPR spacer
cgagtggctatgcggagttgcttatccaactaatcgagga	Protospacer
* *****************.***********.**..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

36638 : 48950

Synechococcus_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX68471.1\|36638_40364_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	2.1e-40	26.8
QAX68472.1\|40524_41979_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	6.3e-54	33.3
QAX68473.1\|42006_43029_+	phosphoribosylformylglycinamidine cyclo-ligase	R9TMC7	Synechococcus_phage	4.0e-63	41.5
QAX68474.1\|43196_43751_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.4e-25	36.1
QAX68475.1\|43934_45482_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	E3SNU8	Prochlorococcus_phage	4.4e-45	52.4
QAX68476.1\|45538_46663_-	CHAP domain-containing protein	F8HGP2	Streptococcus_phage	7.7e-07	28.6
QAX68477.1\|46915_48181_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
QAX68478.1\|48458_48950_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	3.8e-19	43.1

DBSCAN-SWA_2

162768 : 210177

Bacillus_phage(33.33%)

tRNA,transposase,protease,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX68585.1\|162768_165270_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	65.4
QAX70245.1\|165582_167010_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
QAX68586.1\|167080_167359_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
QAX68587.1\|167481_167967_+	PTS ascorbate transporter subunit IIA	NA	NA	NA	NA
QAX68588.1\|168075_168738_+	3-dehydro-L-gulonate-6-phosphate decarboxylase	NA	NA	NA	NA
QAX68589.1\|168742_169606_+	L-ribulose-5-phosphate 3-epimerase	NA	NA	NA	NA
QAX68590.1\|169607_170312_+	L-ribulose-5-phosphate 4-epimerase	NA	NA	NA	NA
QAX68591.1\|170369_170516_+	hypothetical protein	NA	NA	NA	NA
QAX70246.1\|170639_172283_+	transcription antiterminator	NA	NA	NA	NA
QAX68592.1\|172535_173627_+	L-ascorbate 6-phosphate lactonase	NA	NA	NA	NA
QAX68593.1\|174114_175311_+	glycine betaine/L-proline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.0e-30	39.2
QAX68594.1\|175326_177054_+	ABC transporter permease subunit	NA	NA	NA	NA
QAX68595.1\|177184_179827_+	DNA polymerase I	A0A142F1Q9	Bacillus_phage	8.5e-65	35.9
QAX68596.1\|180013_180469_+	CoA-binding protein	NA	NA	NA	NA
QAX68597.1\|180520_180988_+	peroxide-responsive transcriptional repressor PerR	NA	NA	NA	NA
QAX68598.1\|181143_181443_+	hypothetical protein	NA	NA	NA	NA
QAX68599.1\|181664_182999_+	phosphoadenosine phosphosulfate reductase	L0P6Z6	Lactobacillus_phage	6.8e-87	39.5
QAX68600.1\|182991_183522_+	chromosome partitioning protein ParB	A0A220GKT8	Streptococcus_phage	7.1e-64	68.6
QAX68601.1\|183514_183724_+	hypothetical protein	NA	NA	NA	NA
QAX68602.1\|185079_186390_-	SLC13 family permease	NA	NA	NA	NA
QAX68603.1\|186613_187486_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
QAX70247.1\|187785_189017_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	6.3e-63	49.1
QAX68604.1\|189213_190077_-	DUF975 family protein	NA	NA	NA	NA
QAX68605.1\|190113_190299_+	hypothetical protein	NA	NA	NA	NA
QAX68606.1\|190295_191438_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	3.8e-86	43.9
QAX68607.1\|191654_191966_+	hypothetical protein	NA	NA	NA	NA
QAX68608.1\|191969_192509_+	biotin transporter BioY	NA	NA	NA	NA
QAX68609.1\|192648_193428_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
QAX68610.1\|193427_193943_+\|tRNA	tRNA-specific adenosine deaminase	NA	NA	NA	NA
QAX68611.1\|194556_195789_-	S-layer protein	NA	NA	NA	NA
QAX68612.1\|196263_196641_-	hypothetical protein	NA	NA	NA	NA
QAX68613.1\|196833_197166_+	LytTR family transcriptional regulator	NA	NA	NA	NA
QAX68614.1\|197174_197912_+	DNA-binding response regulator	A0A2H4J4Z6	uncultured_Caudovirales_phage	1.0e-12	24.2
QAX68615.1\|197911_199255_+	GHKL domain-containing protein	NA	NA	NA	NA
QAX68616.1\|200953_203104_+	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	4.2e-46	29.8
QAX68617.1\|203112_204474_+\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA
QAX68618.1\|204615_204789_+\|bacteriocin	ComC/BlpC family peptide pheromone/bacteriocin	NA	NA	NA	NA
QAX68619.1\|204807_204975_+\|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	NA	NA	NA	NA
QAX68620.1\|204975_205137_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
QAX68621.1\|205611_206961_+	glucose-6-phosphate isomerase	NA	NA	NA	NA
QAX68622.1\|207309_208818_-	hypothetical protein	NA	NA	NA	NA
QAX68623.1\|209505_210177_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA

DBSCAN-SWA_3

346326 : 352361

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX68746.1\|346326_346962_+	thymidylate kinase	M1PSC7	Streptococcus_phage	2.7e-65	63.4
QAX68747.1\|346979_347855_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	2.1e-68	46.6
QAX68748.1\|348517_348841_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	1.3e-28	59.4
QAX68749.1\|348845_349709_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	3.8e-115	74.7
QAX68750.1\|349735_350128_+	hypothetical protein	NA	NA	NA	NA
QAX68751.1\|350174_350804_-	copper homeostasis protein CutC	NA	NA	NA	NA
QAX68752.1\|351103_351460_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	6.3e-40	65.8
QAX68753.1\|351533_352361_-	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	3.8e-128	79.5

DBSCAN-SWA_4

537345 : 642197

108

Temperate_phage(44.26%)

protease,bacteriocin,tail,terminase,holin,portal,capsid,integrase,tRNA

attL 534028:534045|attR 616305:616322

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
534028:534045	attL	NA	NA	NA	NA
QAX68921.1\|537345_538692_+\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	1.1e-55	30.8
QAX68922.1\|539106_539997_+	RNase adaptor protein RapZ	A0A0R8VB27	Thermobifida_phage	8.8e-06	29.8
QAX68923.1\|539993_540971_+	YvcK family protein	A1IMD5	Streptococcus_phage	4.3e-139	74.5
QAX68924.1\|540967_541879_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	3.8e-105	64.6
QAX68925.1\|542010_543408_+	C69 family dipeptidase	NA	NA	NA	NA
QAX68926.1\|543559_545107_+	zinc-binding protein AdcA	NA	NA	NA	NA
QAX68927.1\|545253_545976_+	GntR family transcriptional regulator	NA	NA	NA	NA
QAX68928.1\|545994_547194_+	SIS domain-containing protein	NA	NA	NA	NA
QAX68929.1\|547290_547551_-	50S ribosomal protein L31 type B	NA	NA	NA	NA
QAX68930.1\|547665_548607_-	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA
QAX68931.1\|549000_549450_+	flavodoxin	NA	NA	NA	NA
QAX68932.1\|549624_549909_+	chorismate mutase	NA	NA	NA	NA
QAX68933.1\|549901_551164_+	voltage-gated chloride channel protein	A0A1X9I5Z9	Streptococcus_phage	6.4e-95	51.3
QAX68934.1\|551278_551626_+	50S ribosomal protein L19	NA	NA	NA	NA
QAX68935.1\|551988_553065_-\|integrase	site-specific integrase	Q0R5B4	Streptococcus_phage	7.5e-68	41.2
QAX68936.1\|553183_553705_-	hypothetical protein	Q938N8	Temperate_phage	7.5e-66	97.7
QAX68937.1\|553715_554093_-	ImmA/IrrE family metallo-endopeptidase	A0A1P8VVK5	Streptococcus_phage	8.1e-54	76.8
QAX68938.1\|554076_554436_-	XRE family transcriptional regulator	A0A1P8VVN3	Streptococcus_phage	1.7e-56	95.0
QAX68939.1\|554623_554842_+	XRE family transcriptional regulator	A0A1P8VVR5	Streptococcus_phage	5.9e-33	97.2
QAX68940.1\|554941_555172_+	hypothetical protein	NA	NA	NA	NA
QAX68941.1\|555308_555527_+	hypothetical protein	NA	NA	NA	NA
QAX68942.1\|555528_555771_+	hypothetical protein	NA	NA	NA	NA
QAX68943.1\|555754_557074_+	chromosome segregation protein SMC	A0A097BY67	Enterococcus_phage	3.5e-152	63.7
QAX68944.1\|557088_558171_+	hypothetical protein	A0A0K2CZH1	Paenibacillus_phage	2.5e-103	53.3
QAX68945.1\|558365_558959_+	hypothetical protein	A0A097BY29	Enterococcus_phage	1.7e-29	43.5
QAX68946.1\|558958_560542_+	DEAD/DEAH box helicase	A0A097BY72	Enterococcus_phage	2.0e-234	77.8
QAX68947.1\|560554_560749_+	hypothetical protein	NA	NA	NA	NA
QAX68948.1\|560771_563015_+	DNA primase	Q5YA88	Bacillus_phage	4.7e-282	63.7
QAX68949.1\|563306_563489_+	hypothetical protein	NA	NA	NA	NA
QAX68950.1\|563481_563877_+	RusA family crossover junction endodeoxyribonuclease	Q5YA86	Bacillus_phage	1.8e-40	58.8
QAX68951.1\|563873_564098_+	hypothetical protein	NA	NA	NA	NA
QAX68952.1\|564100_564286_+	hypothetical protein	A3F626	Streptococcus_phage	6.6e-09	82.9
QAX68953.1\|564282_564534_+	hypothetical protein	NA	NA	NA	NA
QAX68954.1\|564517_564922_+	hypothetical protein	A3F627	Streptococcus_phage	1.6e-39	65.2
QAX68955.1\|564918_565203_+	hypothetical protein	A0A097PAV1	Streptococcus_pyogenes_phage	1.4e-37	89.4
QAX68956.1\|565204_565837_+	SAM-dependent DNA methyltransferase	L0P368	Streptococcus_phage	2.3e-85	68.6
QAX68957.1\|565839_566550_+	DUF1642 domain-containing protein	Q938L9	Temperate_phage	3.0e-25	46.2
QAX68958.1\|566546_566918_+	hypothetical protein	NA	NA	NA	NA
QAX68959.1\|567185_567623_+	DUF1492 domain-containing protein	A0A097PBF1	Streptococcus_pyogenes_phage	1.4e-76	99.3
QAX68960.1\|567686_567905_+	hypothetical protein	NA	NA	NA	NA
QAX68961.1\|567979_568243_+	hypothetical protein	NA	NA	NA	NA
QAX68962.1\|568217_568403_-	hypothetical protein	NA	NA	NA	NA
QAX68963.1\|568479_568998_+	chromosome partitioning protein ParB	Q938L7	Temperate_phage	1.5e-90	100.0
QAX68964.1\|568976_569654_+	hypothetical protein	Q938L6	Temperate_phage	8.7e-131	100.0
QAX70263.1\|569776_570046_+	hypothetical protein	B5SP24	Lactococcus_phage	2.8e-16	51.1
QAX68965.1\|570106_570484_+	ASCH domain-containing protein	Q938L5	Temperate_phage	1.7e-67	100.0
QAX70264.1\|570534_571008_+	hypothetical protein	Q938L4	Temperate_phage	7.3e-76	98.7
QAX68966.1\|571090_572302_+\|terminase	PBSX family phage terminase large subunit	Q938L3	Temperate_phage	3.7e-225	99.7
QAX68967.1\|572315_573818_+\|portal	phage portal protein	Q938L2	Temperate_phage	5.4e-282	100.0
QAX68968.1\|573822_575301_+\|capsid	capsid protein	Q938L1	Temperate_phage	8.2e-275	100.0
QAX68969.1\|575272_575512_+	hypothetical protein	Q938L0	Temperate_phage	2.8e-36	100.0
QAX68970.1\|575573_575840_+	hypothetical protein	Q938K9	Temperate_phage	1.5e-38	100.0
QAX68971.1\|575965_576580_+	hypothetical protein	Q938K8	Temperate_phage	1.3e-96	100.0
QAX68972.1\|576583_577402_+\|capsid	N4-gp56 family major capsid protein	Q79S85	Temperate_phage	4.0e-146	100.0
QAX68973.1\|577455_577872_+	hypothetical protein	Q938K7	Temperate_phage	1.1e-56	100.0
QAX68974.1\|577861_578194_+\|capsid	minor capsid protein	Q79S86	Temperate_phage	9.6e-59	100.0
QAX68975.1\|578193_578550_+\|capsid	capsid protein	Q79S88	Temperate_phage	4.5e-62	100.0
QAX68976.1\|578546_578945_+\|capsid	capsid protein	Q79S87	Temperate_phage	3.5e-71	100.0
QAX68977.1\|578944_579430_+\|tail	phage tail protein	Q938K6	Temperate_phage	1.6e-86	100.0
QAX68978.1\|579468_579903_+	hypothetical protein	Q938K5	Temperate_phage	2.6e-72	100.0
QAX68979.1\|579906_580488_+	hypothetical protein	Q938K4	Temperate_phage	4.9e-106	99.5
QAX68980.1\|580477_583738_+	tape measure domain-containing protein	Q938K3	Temperate_phage	0.0e+00	99.5
QAX68981.1\|583734_584451_+\|tail	phage tail protein	Q938K2	Temperate_phage	2.9e-137	100.0
QAX68982.1\|584447_586595_+	peptidase	Q938K1	Temperate_phage	0.0e+00	95.4
QAX68983.1\|586591_587806_+	hypothetical protein	A3F657	Streptococcus_phage	5.0e-44	49.5
QAX68984.1\|587792_588122_+	hypothetical protein	NA	NA	NA	NA
QAX68985.1\|588132_590022_+	hyaluronidase	Q938J9	Temperate_phage	1.8e-189	74.3
QAX68986.1\|590033_590462_+	DUF1617 family protein	Q938J8	Temperate_phage	8.1e-58	84.3
QAX68987.1\|590464_591097_+	hypothetical protein	Q938J7	Temperate_phage	2.0e-44	49.5
QAX68988.1\|591108_591381_+	hypothetical protein	A7J2B2	Streptococcus_phage	5.5e-36	91.0
QAX68989.1\|591377_591605_+\|holin	phage holin	A7J2B3	Streptococcus_phage	7.6e-31	98.7
QAX68990.1\|591720_592929_+	CHAP domain-containing protein	Q938J4	Temperate_phage	2.9e-214	87.5
QAX68991.1\|593038_594025_-	deoxyribonuclease	A7J2B8	Streptococcus_phage	5.2e-169	99.7
QAX68992.1\|594257_594437_+	Paratox	A3F673	Streptococcus_phage	3.4e-18	77.6
QAX70265.1\|595291_595852_+	HAD family hydrolase	NA	NA	NA	NA
QAX68993.1\|595852_597805_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	1.2e-143	46.3
QAX68994.1\|598161_599886_+	septation ring formation regulator EzrA	NA	NA	NA	NA
QAX68995.1\|600017_600476_-	DUF1694 domain-containing protein	W6LLD2	Streptococcus_phage	3.9e-18	39.1
QAX68996.1\|600702_602010_+	enolase	A0A1X9I5Z8	Streptococcus_phage	1.2e-240	96.6
QAX68997.1\|603644_605186_-	transcriptional regulator	NA	NA	NA	NA
QAX70266.1\|605699_612080_+	DUF1542 domain-containing protein	NA	NA	NA	NA
QAX68998.1\|612943_613105_+\|bacteriocin	streptolysin S family bacteriocin	NA	NA	NA	NA
QAX68999.1\|613326_614277_+	SagB/ThcOx family dehydrogenase	NA	NA	NA	NA
QAX69000.1\|614273_615332_+	streptolysin associated protein SagC	NA	NA	NA	NA
QAX69001.1\|615351_616710_+	streptolysin associated protein SagD	NA	NA	NA	NA
616305:616322	attR	NA	NA	NA	NA
QAX69002.1\|616684_617356_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
QAX69003.1\|617352_618036_+	streptolysin associated protein SagF	NA	NA	NA	NA
QAX69004.1\|618058_618982_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	6.7e-33	38.1
QAX69005.1\|618990_620118_+	ABC transporter permease	NA	NA	NA	NA
QAX69006.1\|620114_621233_+	ABC transporter permease	NA	NA	NA	NA
QAX69007.1\|621803_624536_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
QAX69008.1\|624813_625314_+	queuosine transporter QueT	E7DN70	Pneumococcus_phage	5.4e-05	31.8
QAX69009.1\|625507_627466_+	DNA ligase (NAD(+)) LigA	A0A0K2QQN8	Ralstonia_phage	9.9e-103	34.9
QAX69010.1\|627479_628502_+	YegS/Rv2252/BmrU family lipid kinase	A0A1V0SBJ0	Catovirus	3.6e-19	27.9
QAX69011.1\|628894_629092_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA
QAX69012.1\|629126_629843_+	ATP synthase subunit A	NA	NA	NA	NA
QAX69013.1\|629860_630355_+	ATP synthase subunit B	NA	NA	NA	NA
QAX69014.1\|630354_630891_+	ATP synthase subunit delta	NA	NA	NA	NA
QAX69015.1\|630906_632415_+	ATP synthase subunit alpha	NA	NA	NA	NA
QAX69016.1\|632430_633306_+	ATP synthase subunit gamma	NA	NA	NA	NA
QAX69017.1\|633467_634874_+	ATP synthase subunit beta	NA	NA	NA	NA
QAX69018.1\|634886_635303_+	ATP synthase epsilon chain	NA	NA	NA	NA
QAX69019.1\|635568_635826_+	DUF1146 domain-containing protein	NA	NA	NA	NA
QAX69020.1\|635890_637162_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
QAX69021.1\|637165_637354_+	DNA-directed RNA polymerase subunit beta	NA	NA	NA	NA
QAX70267.1\|637713_638256_+	DNA/RNA non-specific endonuclease	NA	NA	NA	NA
QAX69022.1\|638538_639582_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	4.6e-30	34.3
QAX69023.1\|639791_642197_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA

DBSCAN-SWA_5

677605 : 688209

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX69054.1\|677605_679816_-	LTA synthase family protein	W6LM83	Streptococcus_phage	6.5e-268	68.9
QAX69055.1\|679923_681087_+	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	3.4e-143	65.1
QAX69056.1\|681083_681770_+	3-dehydroquinase	W6LP76	Streptococcus_phage	7.0e-88	68.9
QAX69057.1\|681863_683030_+	chorismate synthase	A0A291AU41	Pandoravirus	4.5e-34	32.8
QAX69058.1\|683090_683432_+	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	2.6e-19	41.1
QAX69059.1\|683653_685006_+	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	5.9e-30	24.7
QAX69060.1\|685093_686362_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
QAX69061.1\|686391_686832_-	hypothetical protein	NA	NA	NA	NA
QAX69062.1\|687066_688209_+	cysteine desulfurase	A0A1X6WFP1	Pacmanvirus	1.4e-24	27.3

DBSCAN-SWA_6

987906 : 1082722

107

Streptococcus_phage(49.21%)

protease,tail,head,terminase,transposase,holin,portal,capsid,integrase,tRNA

attL 1021258:1021317|attR 1062656:1062751

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX69343.1\|987906_988791_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
QAX69344.1\|988906_990247_-	DUF2130 domain-containing protein	NA	NA	NA	NA
QAX69345.1\|990343_991300_-	aromatic acid exporter family protein	NA	NA	NA	NA
QAX69346.1\|991310_991907_-	restriction endonuclease subunit S	NA	NA	NA	NA
QAX69347.1\|991998_994635_-	FtsX-like permease family protein	NA	NA	NA	NA
QAX69348.1\|994649_995351_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-36	37.0
QAX69349.1\|995468_996011_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
QAX69350.1\|996153_996795_-	GntR family transcriptional regulator	NA	NA	NA	NA
QAX69351.1\|996957_997449_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
QAX69352.1\|997456_997657_-	CsbD family protein	J7KJ36	Streptococcus_phage	1.8e-07	51.5
QAX69353.1\|997697_998237_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
QAX69354.1\|998249_998438_-	DUF2273 domain-containing protein	NA	NA	NA	NA
QAX69355.1\|998448_999060_-	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA
QAX69356.1\|999096_999345_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
QAX69357.1\|999707_1002026_-	DNA helicase PcrA	A7KV33	Bacillus_phage	2.3e-130	40.9
QAX69358.1\|1002554_1003877_+	sodium:alanine symporter family protein	NA	NA	NA	NA
QAX69359.1\|1003996_1005232_+	cation diffusion facilitator family transporter	NA	NA	NA	NA
QAX69360.1\|1005601_1006375_-	hypothetical protein	NA	NA	NA	NA
QAX69361.1\|1006743_1007580_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
QAX69362.1\|1007595_1008225_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.7e-27	35.5
QAX69363.1\|1008234_1008876_-	amino acid ABC transporter permease	NA	NA	NA	NA
QAX69364.1\|1008982_1009318_-	alkylphosphonate utilization protein	NA	NA	NA	NA
QAX69365.1\|1009513_1011328_-	glutamine--fructose-6-phosphate aminotransferase	A7IW18	Paramecium_bursaria_Chlorella_virus	6.8e-98	38.6
QAX69366.1\|1011503_1012061_-	signal peptidase I	NA	NA	NA	NA
QAX69367.1\|1012278_1013781_-	pyruvate kinase	NA	NA	NA	NA
QAX69368.1\|1013843_1014857_-	ATP-dependent 6-phosphofructokinase	NA	NA	NA	NA
QAX69369.1\|1014936_1018047_-	DNA polymerase III subunit alpha	A0A2L1IZ23	Streptomyces_phage	8.3e-120	29.9
QAX69370.1\|1018231_1018603_+	GntR family transcriptional regulator	NA	NA	NA	NA
QAX69371.1\|1018602_1019301_+	ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	6.6e-09	27.3
QAX69372.1\|1019310_1020096_+	ABC transporter permease	NA	NA	NA	NA
QAX69373.1\|1020222_1020837_-	TVP38/TMEM64 family protein	M1Q152	Streptococcus_phage	4.0e-50	51.8
1021258:1021317	attL	NA	NA	NA	NA
QAX69374.1\|1021427_1021616_-	Paratox	A3F673	Streptococcus_phage	6.5e-20	81.4
QAX69375.1\|1021846_1022605_+	DNAse	NA	NA	NA	NA
QAX69376.1\|1022715_1023423_+	exotoxin	A0A097PAT7	Streptococcus_pyogenes_phage	5.1e-09	26.7
QAX69377.1\|1023491_1024244_-	CHAP domain-containing protein	A3F665	Streptococcus_phage	2.1e-141	97.2
QAX69378.1\|1024245_1024578_-\|holin	phage holin	A3F664	Streptococcus_phage	2.8e-50	98.2
QAX69379.1\|1024590_1024911_-	hypothetical protein	A3F663	Streptococcus_phage	1.2e-50	99.1
QAX69380.1\|1024921_1025533_-	DUF1366 domain-containing protein	Q938J7	Temperate_phage	1.1e-84	93.6
QAX69381.1\|1025535_1025967_-	DUF1617 family protein	Q938J8	Temperate_phage	1.1e-73	100.0
QAX69382.1\|1025978_1027862_-	hyaluronidase	Q938J9	Temperate_phage	1.8e-250	96.3
QAX69383.1\|1027876_1028890_-	hyaluronoglucosaminidase	Q938K0	Temperate_phage	9.5e-182	98.5
QAX69384.1\|1028886_1031031_-	peptidase	Q938K1	Temperate_phage	0.0e+00	98.7
QAX69385.1\|1031027_1031735_-\|tail	phage tail protein	Q938K2	Temperate_phage	1.7e-92	70.6
QAX69386.1\|1031734_1035658_-\|tail	phage tail tape measure protein	J7KDT4	Streptococcus_phage	2.6e-243	49.1
QAX69387.1\|1035867_1036194_-	hypothetical protein	J7KK85	Streptococcus_phage	6.4e-39	75.0
QAX70279.1\|1036246_1036858_-\|tail	phage tail protein	J7KKC8	Streptococcus_phage	1.8e-74	73.0
QAX69388.1\|1036874_1037300_-	hypothetical protein	J7KBZ9	Streptococcus_phage	2.9e-68	85.8
QAX69389.1\|1037296_1037674_-	HK97 gp10 family phage protein	J7KDM3	Streptococcus_phage	1.8e-45	73.6
QAX69390.1\|1037670_1038018_-\|head,tail	head-tail adaptor protein	J7KJ42	Streptococcus_phage	2.1e-48	84.5
QAX69391.1\|1038014_1038317_-	DNA packaging protein, QLRG family	J7KC36	Streptococcus_phage	2.6e-42	87.8
QAX69392.1\|1038461_1039646_-\|capsid	phage major capsid protein	J7KJ82	Streptococcus_phage	1.2e-162	76.1
QAX69393.1\|1039669_1040335_-\|protease	Clp protease ClpP	M1Q115	Streptococcus_phage	5.4e-93	78.6
QAX69394.1\|1040312_1041533_-\|portal	phage portal protein	J7KDU3	Streptococcus_phage	3.4e-186	81.7
QAX69395.1\|1041566_1041791_-	hypothetical protein	Q938K9	Temperate_phage	3.6e-17	61.4
QAX69396.1\|1041950_1043705_-\|terminase	terminase large subunit	J7KKD1	Streptococcus_phage	0.0e+00	96.2
QAX69397.1\|1043719_1044187_-\|terminase	phage terminase small subunit P27 family	J7KC46	Streptococcus_phage	3.9e-82	98.7
QAX69398.1\|1044354_1044696_-	HNH endonuclease	J7KH36	Streptococcus_phage	2.5e-54	90.7
QAX69399.1\|1044945_1045152_-	hypothetical protein	NA	NA	NA	NA
QAX69400.1\|1045293_1045728_-	ArpU family transcriptional regulator	J7KDQ1	Streptococcus_phage	6.5e-71	93.8
QAX69401.1\|1046177_1046681_-	DUF1642 domain-containing protein	A0A097PAV5	Streptococcus_pyogenes_phage	1.5e-92	99.4
QAX69402.1\|1046677_1046971_-	hypothetical protein	A0A097PAR1	Streptococcus_pyogenes_phage	4.2e-50	100.0
QAX69403.1\|1046967_1047153_-	hypothetical protein	A0A097PBF0	Streptococcus_pyogenes_phage	7.0e-27	100.0
QAX69404.1\|1047177_1047366_-	hypothetical protein	A0A097PAU8	Streptococcus_pyogenes_phage	1.2e-13	97.1
QAX69405.1\|1047368_1047704_-	hypothetical protein	A0A097PAS4	Streptococcus_pyogenes_phage	4.7e-45	100.0
QAX70280.1\|1047706_1047991_-	hypothetical protein	A0A097PAV1	Streptococcus_pyogenes_phage	5.0e-40	91.5
QAX69406.1\|1048154_1048568_-	hypothetical protein	Q938M1	Temperate_phage	1.2e-34	63.1
QAX69407.1\|1048564_1048849_-	DUF3310 domain-containing protein	A0A1P8VVP5	Streptococcus_phage	1.3e-48	96.8
QAX69408.1\|1048842_1049094_-	hypothetical protein	A0A1P8VVV4	Streptococcus_phage	8.9e-41	94.0
QAX69409.1\|1049090_1049447_-	hypothetical protein	A0A1P8VVP9	Streptococcus_phage	5.0e-61	100.0
QAX69410.1\|1049443_1049884_-	RusA family crossover junction endodeoxyribonuclease	A0A097PAS0	Streptococcus_pyogenes_phage	1.6e-80	98.6
QAX69411.1\|1049883_1050087_-	hypothetical protein	Q938M6	Temperate_phage	4.7e-32	100.0
QAX69412.1\|1050092_1050584_-	single-stranded DNA-binding protein	A0A286QNX2	Streptococcus_phage	7.6e-60	74.2
QAX69413.1\|1050576_1051251_-	single-stranded DNA-binding protein	Q938M8	Temperate_phage	2.0e-103	96.9
QAX69414.1\|1051251_1051734_-	siphovirus Gp157 family protein	Q938M9	Temperate_phage	1.6e-49	98.8
QAX69415.1\|1051755_1052010_-	hypothetical protein	Q938N0	Temperate_phage	6.3e-42	97.6
QAX69416.1\|1051990_1052347_-	HTH domain-containing protein	A0A097PAU3	Streptococcus_pyogenes_phage	3.0e-50	99.2
QAX69417.1\|1052485_1053268_-	DNA replication protein	A0A097PAQ0	Streptococcus_pyogenes_phage	2.7e-144	98.1
QAX69418.1\|1053254_1054058_-	DnaD domain protein	A0A2P0VI76	Streptococcus_phage	2.4e-63	53.8
QAX69419.1\|1054173_1054617_-	hypothetical protein	NA	NA	NA	NA
QAX69420.1\|1054672_1055053_+	hypothetical protein	NA	NA	NA	NA
QAX69421.1\|1055042_1055315_-	hypothetical protein	NA	NA	NA	NA
QAX69422.1\|1055487_1055667_-	hypothetical protein	A0A1X9I5M8	Streptococcus_phage	1.2e-12	65.5
QAX69423.1\|1055928_1056225_-	hypothetical protein	A0A097PAT8	Streptococcus_pyogenes_phage	3.7e-46	95.9
QAX69424.1\|1056666_1056906_-	XRE family transcriptional regulator	A0A097PBE6	Streptococcus_pyogenes_phage	9.1e-35	96.2
QAX69425.1\|1056999_1057671_+	DUF4145 domain-containing protein	A0A1S5S8U0	Streptococcus_phage	7.0e-40	39.9
QAX69426.1\|1057787_1057946_-	hypothetical protein	J7KH24	Streptococcus_phage	1.3e-21	90.4
QAX69427.1\|1058004_1058220_+	hypothetical protein	J7KBX0	Streptococcus_phage	8.8e-29	97.1
QAX69428.1\|1058725_1059514_+	phage repressor protein	A0A1S5SD15	Streptococcus_phage	1.4e-87	63.8
QAX69429.1\|1059592_1060489_+	ATP-binding protein	NA	NA	NA	NA
QAX69430.1\|1060503_1060863_+	DUF4325 domain-containing protein	NA	NA	NA	NA
QAX69431.1\|1060859_1061405_+	PIN domain-containing protein	NA	NA	NA	NA
QAX69432.1\|1061524_1062613_+\|integrase	site-specific integrase	Q38159	Streptococcus_phage	7.2e-204	99.7
QAX69433.1\|1062975_1063596_+	DUF3862 domain-containing protein	NA	NA	NA	NA
1062656:1062751	attR	NA	NA	NA	NA
QAX69434.1\|1063852_1066117_-	glycogen/starch/alpha-glucan family phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	1.2e-11	43.7
QAX69435.1\|1066152_1067646_-	4-alpha-glucanotransferase	NA	NA	NA	NA
QAX69436.1\|1067759_1068779_-	LacI family transcriptional regulator	C6ZCU4	Enterobacteria_phage	5.7e-17	27.8
QAX69437.1\|1069023_1070271_+	extracellular solute-binding protein	NA	NA	NA	NA
QAX69438.1\|1070544_1071906_+	sugar ABC transporter permease	NA	NA	NA	NA
QAX69439.1\|1071905_1072742_+	sugar ABC transporter permease	NA	NA	NA	NA
QAX69440.1\|1072896_1073697_+	LacI family transcriptional regulator	NA	NA	NA	NA
QAX69441.1\|1073812_1074628_-	maltodextrose utilization protein malA	NA	NA	NA	NA
QAX69442.1\|1074649_1075510_-	sugar ABC transporter permease	NA	NA	NA	NA
QAX69443.1\|1075506_1076814_-	sugar ABC transporter permease	NA	NA	NA	NA
QAX69444.1\|1076888_1079024_-	alpha-amylase	NA	NA	NA	NA
QAX69445.1\|1079049_1080753_-	alpha-glycosidase	NA	NA	NA	NA
QAX69446.1\|1080918_1082178_-	extracellular solute-binding protein	NA	NA	NA	NA
QAX69447.1\|1082497_1082722_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_7

1482836 : 1556046

Streptococcus_phage(72.73%)

tail,head,terminase,portal,capsid,integrase,tRNA

attL 1511839:1511855|attR 1552642:1552658

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX69779.1\|1482836_1484876_-\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
QAX69780.1\|1485253_1486171_-\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
QAX69781.1\|1486134_1486341_-	hypothetical protein	NA	NA	NA	NA
QAX69782.1\|1486542_1487097_-	hypothetical protein	NA	NA	NA	NA
QAX69783.1\|1487207_1488047_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	8.4e-51	40.7
QAX69784.1\|1488169_1489318_-	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA
QAX69785.1\|1489435_1491067_-	Na/Pi cotransporter family protein	A0A1B1ITU5	uncultured_Mediterranean_phage	2.7e-05	38.8
QAX69786.1\|1491268_1491991_+	hypothetical protein	NA	NA	NA	NA
QAX69787.1\|1492119_1492962_-	DegV family protein	A0A1X9I5J4	Streptococcus_phage	1.3e-91	61.9
QAX69788.1\|1493254_1493812_+	TetR/AcrR family transcriptional regulator	A0A1X9I6A2	Streptococcus_phage	3.2e-14	60.3
QAX69789.1\|1493847_1494672_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
QAX70298.1\|1494673_1495279_-	trimeric intracellular cation channel family protein	NA	NA	NA	NA
QAX69790.1\|1495487_1496465_-	tagatose 1,6-diphosphate aldolase	NA	NA	NA	NA
QAX69791.1\|1496974_1497490_-	galactose-6-phosphate isomerase subunit LacB	NA	NA	NA	NA
QAX69792.1\|1497504_1497930_-	galactose-6-phosphate isomerase	A0A222YX14	Synechococcus_phage	2.2e-07	28.6
QAX70299.1\|1498186_1499635_-	PTS galactitol transporter subunit IIC	NA	NA	NA	NA
QAX69793.1\|1499663_1499969_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
QAX69794.1\|1499961_1500435_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
QAX69795.1\|1500671_1501442_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	6.4e-21	27.8
QAX69796.1\|1501468_1501639_-	copper-binding protein	NA	NA	NA	NA
QAX69797.1\|1501645_1501849_-	copper chaperone	NA	NA	NA	NA
QAX70300.1\|1501862_1504064_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.0e-111	37.4
QAX69798.1\|1504093_1504528_-	CopY/TcrY family copper transport repressor	NA	NA	NA	NA
QAX69799.1\|1504699_1505686_+	alpha/beta hydrolase	NA	NA	NA	NA
QAX69800.1\|1505819_1506176_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA
QAX69801.1\|1506375_1509237_-	translation initiation factor IF-2	E3T4N3	Cafeteria_roenbergensis_virus	4.5e-19	25.2
QAX69802.1\|1509256_1509559_-	YlxQ-related RNA-binding protein	NA	NA	NA	NA
QAX69803.1\|1509551_1509848_-	YlxR family protein	NA	NA	NA	NA
QAX69804.1\|1509863_1511021_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
QAX70301.1\|1511195_1511672_-	ribosome maturation factor RimP	NA	NA	NA	NA
1511839:1511855	attL	NA	NA	NA	NA
QAX69805.1\|1511976_1512156_-	Paratox	A3F673	Streptococcus_phage	5.6e-21	83.1
QAX69806.1\|1512394_1513567_+	streptodornase	A7J2B8	Streptococcus_phage	4.7e-76	49.8
QAX69807.1\|1513682_1514879_-	CHAP domain-containing protein	Q938J4	Temperate_phage	6.1e-196	82.2
QAX69808.1\|1514989_1515175_-	hypothetical protein	Q938J5	Temperate_phage	6.2e-23	91.8
QAX69809.1\|1515171_1515471_-	hypothetical protein	Q938J6	Temperate_phage	3.5e-36	82.3
QAX69810.1\|1515481_1516102_-	hypothetical protein	A3F662	Streptococcus_phage	8.3e-80	88.8
QAX69811.1\|1516104_1516266_-	hypothetical protein	NA	NA	NA	NA
QAX69812.1\|1516274_1518182_-	hyaluronidase	Q938J9	Temperate_phage	3.8e-139	61.7
QAX69813.1\|1518192_1518828_-	hypothetical protein	A0A097PBF7	Streptococcus_pyogenes_phage	2.2e-75	67.6
QAX69814.1\|1518827_1519883_-	hyaluronoglucosaminidase	A3F657	Streptococcus_phage	1.2e-126	73.2
QAX69815.1\|1519879_1521862_-	peptidase	A7J2A7	Streptococcus_phage	0.0e+00	92.5
QAX69816.1\|1521871_1522714_-\|tail	phage tail protein	A7J2A6	Streptococcus_phage	8.5e-160	99.6
QAX69817.1\|1522725_1527108_-\|tail	phage tail protein	A7J2A5	Streptococcus_phage	3.2e-226	76.4
QAX69818.1\|1527122_1527356_-	hypothetical protein	A7J2A4	Streptococcus_phage	4.4e-34	100.0
QAX69819.1\|1527430_1527886_-	hypothetical protein	A7J2A3	Streptococcus_phage	8.3e-77	100.0
QAX69820.1\|1527939_1528539_-\|tail	phage major tail protein, TP901-1 family	A7J2A2	Streptococcus_phage	4.1e-92	98.9
QAX69821.1\|1528550_1528910_-	hypothetical protein	A7J2A1	Streptococcus_phage	6.8e-58	97.5
QAX69822.1\|1528913_1529258_-	HK97 gp10 family phage protein	A7J2A0	Streptococcus_phage	6.1e-56	99.1
QAX69823.1\|1529254_1529533_-	hypothetical protein	A7J299	Streptococcus_phage	4.2e-47	98.9
QAX69824.1\|1529543_1529900_-	hypothetical protein	A7J298	Streptococcus_phage	2.8e-56	97.5
QAX69825.1\|1529911_1530799_-\|capsid	phage capsid protein	A7J297	Streptococcus_phage	3.6e-161	99.7
QAX69826.1\|1530811_1531381_-	DUF4355 domain-containing protein	A7J296	Streptococcus_phage	2.6e-80	97.9
QAX69827.1\|1531536_1531803_-	hypothetical protein	A0A097PAR8	Streptococcus_pyogenes_phage	1.7e-34	88.6
QAX69828.1\|1531805_1531994_-	hypothetical protein	A7J294	Streptococcus_phage	1.4e-22	98.4
QAX69829.1\|1532024_1533470_-\|head	phage head morphogenesis protein	A7J293	Streptococcus_phage	3.4e-257	92.9
QAX69830.1\|1533429_1534962_-\|portal	phage portal protein	A7J292	Streptococcus_phage	1.3e-286	98.2
QAX69831.1\|1534977_1536255_-\|terminase	PBSX family phage terminase large subunit	A7J291	Streptococcus_phage	1.3e-241	97.6
QAX69832.1\|1536244_1536697_-\|terminase	terminase small subunit	A7J290	Streptococcus_phage	6.9e-76	100.0
QAX69833.1\|1536786_1537203_-	DUF722 domain-containing protein	A7J289	Streptococcus_phage	6.6e-73	100.0
QAX69834.1\|1537199_1537391_-	hypothetical protein	NA	NA	NA	NA
QAX69835.1\|1537541_1538234_-	site-specific DNA-methyltransferase	A0A1W6JMZ7	Lactococcus_phage	9.6e-101	71.9
QAX69836.1\|1538242_1538509_-	hypothetical protein	A7J287	Streptococcus_phage	5.4e-20	65.2
QAX69837.1\|1538673_1539996_-	DEAD/DEAH box helicase	A7J284	Streptococcus_phage	1.9e-254	98.4
QAX69838.1\|1539992_1540268_-	VRR-NUC domain-containing protein	A7J283	Streptococcus_phage	9.1e-47	100.0
QAX69839.1\|1540654_1543039_-	DNA primase	A7J282	Streptococcus_phage	4.1e-276	94.4
QAX69840.1\|1543043_1544966_-	DNA polymerase	A7J280	Streptococcus_phage	0.0e+00	96.7
QAX69841.1\|1545008_1545566_-	DUF2815 family protein	D2J040	Enterococcus_phage	2.5e-51	57.9
QAX69842.1\|1545576_1545975_-	hypothetical protein	NA	NA	NA	NA
QAX69843.1\|1545978_1547133_-	DUF2800 domain-containing protein	A7J278	Streptococcus_phage	4.5e-204	91.9
QAX69844.1\|1547132_1547432_-	hypothetical protein	A7J277	Streptococcus_phage	1.8e-43	100.0
QAX69845.1\|1547519_1547723_-	hypothetical protein	A7J276	Streptococcus_phage	2.3e-31	95.5
QAX69846.1\|1547869_1548256_-	hypothetical protein	A7J274	Streptococcus_phage	3.1e-56	88.2
QAX69847.1\|1548252_1548456_-	hypothetical protein	NA	NA	NA	NA
QAX69848.1\|1548448_1548619_-	hypothetical protein	A7J273	Streptococcus_phage	6.9e-21	89.3
QAX69849.1\|1548615_1548891_-	DNA-binding protein	A7J272	Streptococcus_phage	5.9e-46	95.6
QAX69850.1\|1548952_1549168_-	transcriptional regulator	M1Q1B4	Streptococcus_phage	4.2e-23	76.8
QAX69851.1\|1549215_1549629_+	hypothetical protein	NA	NA	NA	NA
QAX69852.1\|1550039_1550441_+	XRE family transcriptional regulator	A7J269	Streptococcus_phage	1.1e-40	72.9
QAX69853.1\|1550454_1550838_+	ImmA/IrrE family metallo-endopeptidase	A7J268	Streptococcus_phage	5.3e-69	99.2
QAX69854.1\|1550848_1551400_+	hypothetical protein	A7J267	Streptococcus_phage	3.4e-85	92.3
QAX69855.1\|1551516_1552596_+\|integrase	site-specific integrase	A7J266	Streptococcus_phage	1.3e-176	86.9
QAX69856.1\|1552793_1553429_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
1552642:1552658	attR	NA	NA	NA	NA
QAX69857.1\|1553428_1554220_-	aminoglycoside phosphotransferase	NA	NA	NA	NA
QAX69858.1\|1554283_1555318_-	ABC transporter permease	NA	NA	NA	NA
QAX69859.1\|1555320_1556046_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	8.7e-20	28.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP033337

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection