CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP033348	Salmonella enterica subsp. enterica strain CFSA1096 chromosome, complete genome	3 crisprs	PD-DExK,WYL,csa3,cas3,DEDDh,DinG,RT	0	20	7	0
CP033347	Salmonella enterica subsp. enterica strain CFSA1096 plasmid pCFSA1096, complete sequence	0 crisprs	NA	0	0	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP033348_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033348_1

627520-627761

Orphan

Consensus_repeat	Method
TTTTACAGGGCGACAGGATGAATGACTGTCCACGACGCTATACCCAAAAGAAA	PILER-CR
GGGTTTTTGCTTTTACAGGGCGGCAGGATGAATGACTGTCCACGACGCTATA	CRISPRCasFinder

2 spacers

The CRISPR arrays of CP033348_1

>merge|CP033348|1|627520-627761|PILER-CR,CRISPRCasFinder
GATGAATGACTGTCCACGACAGAACCCGGCTTATCGGTCAGTTTCACTTCTTCATAAAACCCGCTTCGGCGGGTTTTTGCTTTTACAGGGCGGCAGGATGAATGACTGTCCACGACGCTATATCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTCTTCATAAAACCCGCTTCGGCGGGGTTTTTGCTTTTACAGGGCGACAGGATGAATGACTGTCCACGACGCTATACCCAAAAGAAA

>CP033348|1|1|627520-627761|PILER-CR
GATGAATGACTGTCCACGACAGAACCCGGCTTATCGGTCAGTTTCACTTCTTC	ATAAAACCCGCTTCGGCGGGTTTTTGCTTTTACAGGGCGGCAGGATGAATGACTGTCCAC
GACGCTATATCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTCTTCATAAA	ACCCGCTTCGGCGGGGTTTTTGCTTTTACAGGGCGACAGGATGAATGACTGTCCAC
GACGCTATACCCAAAAGAAA

>CP033348|1|1|627590-627750|CRISPRCasFinder
GGGTTTTTGCTTTTACAGGGCGGCAGGATGAATGACTGTCCACGACGCTATA	TCCAAAAGAAAGCGGCTTATCGGTCAGTTTCACCTCTTCATAAAACCCGCTTCGGCG
GGGTTTTTGCTTTTACAGGGCGACAGGATGAATGACTGTCCACGACGCTATA

Protein	Signature genes	Signature genes Name	Protein_function
CP033348.1\|QAX49360.1\|640194_640896_-\|pirin-family-protein	unknown	unknown	gnl\|CDD\|224655
CP033348.1\|QAX49350.1\|625027_625918_+\|2-hydroxy-3-oxopropionate-reductase	unknown	unknown	gnl\|CDD\|183197
CP033348.1\|QAX49348.1\|622130_623702_-\|galactarate-dehydratase	unknown	unknown	gnl\|CDD\|274491
CP033348.1\|QAX49343.1\|615739_616546_-\|HPr-family-phosphocarrier-protein	unknown	unknown	gnl\|CDD\|227014
CP033348.1\|QAX53089.1\|637226_638558_+\|HAAAP-family-serine/threonine-permease	unknown	unknown	gnl\|CDD\|273283
CP033348.1\|QAX49346.1\|620099_620933_+\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
CP033348.1\|QAX53087.1\|617986_618901_-\|1-phosphofructokinase	unknown	unknown	gnl\|CDD\|274804
CP033348.1\|QAX49355.1\|631940_633149_+\|propionate-kinase	unknown	unknown	gnl\|CDD\|183484
CP033348.1\|QAX49352.1\|628496_629435_+\|transcriptional-regulator-TdcA	unknown	unknown	gnl\|CDD\|182391
CP033348.1\|QAX49356.1\|633182_635477_+\|formate-C-acetyltransferase	unknown	unknown	gnl\|CDD\|153087
CP033348.1\|QAX49357.1\|635546_636911_+\|L-serine-ammonia-lyase	unknown	unknown	gnl\|CDD\|185000
CP033348.1\|QAX49349.1\|624231_625002_+\|2-dehydro-3-deoxyglucarate-aldolase	unknown	unknown	gnl\|CDD\|182547
CP033348.1\|QAX49354.1\|630542_631874_+\|threonine/serine-transporter-TdcC	unknown	unknown	gnl\|CDD\|184191
CP033348.1\|QAX49347.1\|620943_621891_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|238571
CP033348.1\|QAX49344.1\|616532_617960_-\|PTS-fructose-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|224218
CP033348.1\|QAX49358.1\|638583_639894_+\|serine-dehydratase-subunit-alpha-family-protein	unknown	unknown	gnl\|CDD\|226206
CP033348.1\|QAX49353.1\|629532_630522_+\|serine/threonine-dehydratase	unknown	unknown	gnl\|CDD\|236317
CP033348.1\|QAX49345.1\|618911_619766_-\|tagatose-1,6-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|183710
CP033348.1\|QAX49359.1\|640006_640171_-\|hypothetical-protein	unknown	unknown	unknown
CP033348.1\|QAX49351.1\|626015_627161_+\|glycerate-2-kinase	unknown	unknown	gnl\|CDD\|182392

Protein	Function_ID	Function_description	E-value
CP033348.1\|QAX49360.1\|640194_640896_-\|pirin-family-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	5.12189e-69
CP033348.1\|QAX49350.1\|625027_625918_+\|2-hydroxy-3-oxopropionate-reductase	gnl\|CDD\|183197	PRK11559, garR, tartronate semialdehyde reductase; Provisional.	0
CP033348.1\|QAX49348.1\|622130_623702_-\|galactarate-dehydratase	gnl\|CDD\|274491	TIGR03248, galactar-dH20, galactarate dehydratase. Galactarate dehydratase converts D-galactarate to 5-dehydro-4-deoxyglucarate which is subsequently acted on by GarL, tartronate semialdehyde reductase and glycerate kinase (GenProp0714).	0
CP033348.1\|QAX49343.1\|615739_616546_-\|HPr-family-phosphocarrier-protein	gnl\|CDD\|227014	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism].	3.74832e-67
CP033348.1\|QAX53089.1\|637226_638558_+\|HAAAP-family-serine/threonine-permease	gnl\|CDD\|273283	TIGR00814, membrane_transport_protein_YhjV, serine transporter. The Hydroxy/Aromatic Amino Acid Permease (HAAAP) Family- serine/threonine subfamily (TC 2.A.42.2) The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.//added GO terms, none avaialbelf or ser/thr specifically [SS 2/6/05] [Transport and binding proteins, Amino acids, peptides and amines].	1.63921e-164
CP033348.1\|QAX49346.1\|620099_620933_+\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	1.54692e-55
CP033348.1\|QAX53087.1\|617986_618901_-\|1-phosphofructokinase	gnl\|CDD\|274804	TIGR03828, pfkB, 1-phosphofructokinase. This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688).	1.8917e-129
CP033348.1\|QAX49355.1\|631940_633149_+\|propionate-kinase	gnl\|CDD\|183484	PRK12379, PRK12379, propionate kinase.	0
CP033348.1\|QAX49352.1\|628496_629435_+\|transcriptional-regulator-TdcA	gnl\|CDD\|182391	PRK10341, PRK10341, transcriptional regulator TdcA.	0
CP033348.1\|QAX49356.1\|633182_635477_+\|formate-C-acetyltransferase	gnl\|CDD\|153087	cd01678, PFL1, Pyruvate formate lyase 1. Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. The PFL mechanism involves an unusual radical cleavage of pyruvate in which two cysteines and one glycine form radicals that are required for catalysis. PFL has a ten-stranded alpha/beta barrel domain that is structurally similar to those of all three ribonucleotide reductase (RNR) classes as well as benzylsuccinate synthase and B12-independent glycerol dehydratase.	0
CP033348.1\|QAX49357.1\|635546_636911_+\|L-serine-ammonia-lyase	gnl\|CDD\|185000	PRK15040, PRK15040, L-serine ammonia-lyase.	0
CP033348.1\|QAX49349.1\|624231_625002_+\|2-dehydro-3-deoxyglucarate-aldolase	gnl\|CDD\|182547	PRK10558, PRK10558, alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional.	0
CP033348.1\|QAX49354.1\|630542_631874_+\|threonine/serine-transporter-TdcC	gnl\|CDD\|184191	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional.	0
CP033348.1\|QAX49347.1\|620943_621891_+\|sugar-kinase	gnl\|CDD\|238571	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.	2.05908e-99
CP033348.1\|QAX49344.1\|616532_617960_-\|PTS-fructose-transporter-subunit-IIC	gnl\|CDD\|224218	COG1299, FruA, Phosphotransferase system, fructose-specific IIC component [Carbohydrate transport and metabolism].	1.51855e-126
CP033348.1\|QAX49358.1\|638583_639894_+\|serine-dehydratase-subunit-alpha-family-protein	gnl\|CDD\|226206	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism].	0
CP033348.1\|QAX49353.1\|629532_630522_+\|serine/threonine-dehydratase	gnl\|CDD\|236317	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB.	0
CP033348.1\|QAX49345.1\|618911_619766_-\|tagatose-1,6-bisphosphate-aldolase	gnl\|CDD\|183710	PRK12737, gatY, tagatose-bisphosphate aldolase subunit GatY.	0
CP033348.1\|QAX49351.1\|626015_627161_+\|glycerate-2-kinase	gnl\|CDD\|182392	PRK10342, PRK10342, glycerate kinase I; Provisional.	0

>CP033348.1|QAX49351.1|626015_627161_+|glycerate-2-kinase
MKIVIAPDSYKESLSAAEVAQAIEKGFREIFPDAQYVSVPVADGGEGTVEAMIAATQGVERAAWVTGPLGEKVKACWGMSGDGKTAFIEMAAASGLALVPPEKRNPLITTSRGTGELILQALESGASNIIIGIGGSATNDGGAGMMQALGAKLRDANGADIGYGGGSLHCLSDIDISDLDPRLKLCAIRVACDVSNPLIGDNGASRIFGPQKGATEENIVELDRNLAHYADIIKKSLNVDVKAAPGAGAAGGMGAALMAFLGAELRSGIEIVTAALNLEEHIHDCTLVVTGEGRIDSQSIRGKVPIGVANVAKKYHKPVIGIAGSLTHDVGIVHHYGIDAVFSVLTRIVTLEEAFRGAFDNIYRASRNVAAALAIGMRSAG
>CP033348.1|QAX49350.1|625027_625918_+|2-hydroxy-3-oxopropionate-reductase
MTMKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADGHGNDDHSALACYYEKLAKVEVTR
>CP033348.1|QAX49349.1|624231_625002_+|2-dehydro-3-deoxyglucarate-aldolase
MNNAIFPNKFKAALAAQQVQIGCWSALASPITTEVLGLAGFDWLVLDGEHAPNDVTTLIPQLMALKGSASAPVVRVPTNEPVIIKRMLDIGFYNFLIPFVETQEEAARAVASTRYPPEGIRGVSVSHRANMFGTVPDYFAQSNKNITIIVQIESQLGVDNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQQTIQHIFARAKAHGKPCGILAPVEADARRYLEWGATFVAAGSDLGAFRASTQKLADTFKK
>CP033348.1|QAX49348.1|622130_623702_-|galactarate-dehydratase
MANIEIRQESPSAFYIKVHETDNVAIIVNDHGLKAGTRFPDGLELTEHIPQGHKVALTDIPAHGEIIRYGEVIGYAVRDIPRGSWIDESLVELPKAPPLNTLPLATKVPEPLPPLEGYTFEGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKVIERDLLPKYPNVDGVVGLNHLYGCGVAINAPAAVVPIRTIHNIALNPNFGGEVMVIGLGCEKLQPERLLEGTEDVPAIAVESASIVRLQDEQHVGFKSMVDDILRVAERHLTKLNQRQRETCPASELVVGMQCGGSDAFSGVTANPAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAINEAVGKRLLDEMAWYDNYLDMGKTDRSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDFVCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWYDLMDINAGTIATGEETIEDVGWKLFHFILDVASGRKKTFSDQWGLHNQLAVFNPAPVT
>CP033348.1|QAX49347.1|620943_621891_+|sugar-kinase
MNITIATLGELLVEFLAKKENQGFSSPGEFWGPYPSGAPAIFADQVAKLGFRSLLFSCVGNDAFGVMNITRLSRDGVNVQGISVLPNATTGSAFVSYRSQAQRDFIFNMPDSACGLLSADHLDETLLRQYRHFHIMGSSLFSFRLIDAVRKAISIVKENGGTISFDPNIRKEMLKIREMSQAFEYILDYTDFFLPSDGELDYFGLSKSRDEEKIVARLHKRGIAHVIIKRGARGASYYSKDEQHHVAGYPVKVVDPTGAGDCFGATFVSLFLAGYSVPDALAHANAAGSLAISARGPMEGTSTLAQIKELMRQQN
>CP033348.1|QAX49346.1|620099_620933_+|DeoR/GlpR-transcriptional-regulator
MAKPSTSLLKRRLDIAEIVRKNGEIKVDDLAEMLSVSGVTIRNDLNYLEQQGYLKRSFGGAIYTAQPVRAAVSHEVVQSQALEHSVELELAKQVARLVCDDDTVFLGAGEVLRKALPFLGDYRDLCLIINDLSHVAPARDYIDGEIVLLGGVLGRSGQALGGEIAIQSLQQFQPSCCLVMVDHISEDGTLNVKNESAAALLSECLRLSGQSIAVVAQRPIHDVARYPVGKLNTLSAIITPQIVAAEYHSRFLADGLTNSYTNNECLTWINPTLHQAR
>CP033348.1|QAX49345.1|618911_619766_-|tagatose-1,6-bisphosphate-aldolase
MFIISSKNMLQKAQHAGYAVPAFNIHNLETLQVVVETAAEMRSPLIVAGTPGTFSYAGMGNIVAIAGDLAREYNLPLAIHLDHHESLADIESKVMAGIRSVMIDGSHFPFEENVALVKSVVDFCHRYDTSVEAELGRLGGIEDDLVVDSKDALYTNPQQAREFVARTGIDSLAVAIGTAHGMYAAEPKLDFERLAEIRALVDIPLVLHGASGLPESDIRQAISLGVCKVNVATELKIAFSDALKEYFLQNPKANDPRHYMQPAKQAMKEVVRKVIHVCGCEGQL
>CP033348.1|QAX53087.1|617986_618901_-|1-phosphofructokinase
MIYTLTLNSAIDMNIFSDPLQPNIVNRTHHTEFCPNGKGVNVALVLDHFQIPAHILGIFGGFTGHYIVESLRTRKMPVTPAWVEEPTRINIFIHDGKQEYKLVNPGSYIPDECKQKIITIISQLPDADYLVISGSLPQGIESRFYAEIMHICQQKNIGIILDISHPSLRQLLEFKPLLIKPNDEEVKAIFGLTVSDDNDAKNTLTTLHALGAQNVLLTLGAKGMYFSNGIDYWFCSAPTVDLVSSACAGDAALAAFLSQWLSTGEVEYALSLASATGADVASSAGLGQLAAIETLLSQIHVRKL
>CP033348.1|QAX49344.1|616532_617960_-|PTS-fructose-transporter-subunit-IIC
MKKIIAVTGCPTGIAHTFMAEEALKNAAKKLSVEIKVETNGASGVENAIQPADLVDIAGVIIAADKDVLPDRFNGLPVIEVPVKEAIHHPAELINKVINGEAPIRKGESTTSTEIIEKESLGRQIYKHLMSGVSNMLPFVVAGGILIAVSFLWGIYSADPNSAEYNATAAMLMKIGQQAFSIMVPVFTAYIAFSISGRPGMVAGFVGGLLANATGAGFLGGIIAGFAAGYLMLWVKNRLEGLPRQYEGLKSIFIMPLIGVLVIGVLMSLLGQPVAAINNSMMNWLASLQEANPILLGIVVGAMCSFDFGGPVNKAAYVTGTLLLGQGNFYFMAGVSAACITPPLVIALATTFFPKGFSEEERAAGMVNYILGCTHITEGAIPFAAKDPLRVIPMMMIASSISAVLSYSLRIQVPAPHGGFLILPLVSQPLAWVLCILAGSACGAVMLGLWRLWAVRKNSVNTTPVAKAGGQNAAL
>CP033348.1|QAX49343.1|615739_616546_-|HPr-family-phosphocarrier-protein
MQLCEHDIFISDERLDKATALHRVVEKLSAAGNTTPDYLRGMLDREAQISTYLGNGIAIPHGTPESRDAVLQTGVKVIVFRHGVDWGDGNTAYLVTGIAARSNEHLEILRQLTRVLSDDAILQALAKAESPSQVLALLTGSTTNTPAAVELQEDEQATFVIHNPHGLHARPSAVLVKFIKQFQSHITVENLDNASGPVDGKNLMRVVSLGAKKGHHLLFRAQGEDAQQALREIGELIASGAGEMITVPVTPPPEVMQPKRSWLSRLFN
>CP033348.1|QAX49352.1|628496_629435_+|transcriptional-regulator-TdcA
MNTLVLPKTQHLVVFQEVIRSGSIGSAAKSLGLTQPAVSKIISDVEAYFGVELIVRKNTGVTLTEAGQVLLSWSESITREMKNMINEMNSMTCNTVVDVSFGFPSLIGFTFMSDMIHKFKEVFPKAQVSMYEAQLSSFLPALRDGRLDFAIGTLSNEMQLQDLHVEPLFESEFVLVASKSRTCTGTITLESLKDEQWVLPQTNMGYYSELLTTLQRNGISIENIVKTDSVVTIYNLVLNADFLTVIPCDMTTPFGSNQFITIPIKDTLPVARYAAVWSKNYRIKKAASVLVELAKQYSSYNGCRRRQLIEIE
>CP033348.1|QAX49353.1|629532_630522_+|serine/threonine-dehydratase
MHITYDLPVAIEDILEAKKRLAGKIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTEAEKRKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVETEGRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQAENVHGMAASYYAGEITTHRTTGTLADGCDVSRPGNLTYEIVRELIDDIVLVSEDEIRNSMIALIQRNKVITEGAGALACAALLSGKLDSHIQNRKTVSIISGGNIDLSRVSQITGLVDA
>CP033348.1|QAX49354.1|630542_631874_+|threonine/serine-transporter-TdcC
MSTTDSIVSSQAKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTITNTFMTFWENQLQMPALNRGFVALFLLLLMAFVIWFGKDLMVKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLSNIALTGHDGILVTVWLGISIMVFSFNFSPIVSSFVVSKREEYEKEFGREFTERKCSQIISRASMLMVAVVMFFAFSCLFTLSPQNMADAKAQNIPVLSYLANHFASLSGTKSTFATVLEYGASIIALVAIFKSFFGHYLGTLEGLNGLVLKFGYKGDKTKVSMGKLNTISMIFIMGSTWVVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTLIGLLTILNIVYKLF
>CP033348.1|QAX49355.1|631940_633149_+|propionate-kinase
MNEFPVVLVINCGSSSIKFSVLDVATCDVLMAGIADGMNTENAFLSINGDKPINLAHSNYEEALKAIAFELEKRDLTDSVALIGHRIAHGGELFTQSVIITDEIIDNIRRVSPLAPLHNYANLSGIDAARRLFPAVRQVAVFDTSFHQTLAPEAYLYGLPWEYFSSLGVRRYGFHGTSHRYVSRRAYELLDLDEKNSGLIVAHLGNGASICAVRNGQSVDTSMGMTPLEGLMMGTRSGDVDFGAMAWIAKETGQTLSDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERARLAIKTFVHRIARHIAGHAASLHRLDGIIFTGGIGENSVLIRQLVIEHLGVLGLTLDVEMNKQPNSHGERIISANPSQVICAVIPTNEEKMIALDAIHLGNVKAPVEFA
>CP033348.1|QAX49356.1|633182_635477_+|formate-C-acetyltransferase
MKVNIDTSDMLYAEAWRDFKGTDWKEEINVRDFIQHNYTPYEGDESFLADATPATTALWEKVMAGIRIENATHAPVDFDTNIATTITAHDAGYIEKDLEKIVGLQTDKPLKRALHPFGGVNMIKSSFHAYGREMDADFEYTFTDLRKTHNQGVFDVYSPDMLRCRKSGVLTGLPDGYGRGRIIGDYRRVALYGIRYLVRERELQFADLQSNLEQGQNLEATIRLREELAEHRRALLQMQEMAAKYGYDISRPARNAQEAVQWLYFAYLAAVKSQNGGAMSLGRTASFLDIYIERDFNAGLLTEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSGDPIWATEVIGGMGLDGRTLVTKNSFRYLHTLHTMGPAPEPNLTILWSEALPVAFKKYAAQVSIVTSSLQYENDDLMRTDFNSDDYAIACCVSPMVIGKQMQFFGARANLAKTLLYAINGGVDEKLKIQVGPKTAPLMDEVLDYDAVMESLDHFMDWLAVQYISALNIIHYMHDKYSYEASLMALHDRDVYRTMACGIAGLSVAADSLSAIRYAQVKPIRDENGLAIDFAIEGEYPQYGNNDERVDSIACDLVKRFMQKISVLPTYRNAVPTQSILTITSNVVYGQKTGNTPDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLPFTYAKDGISYTFSIVPAALGKEDAVRKTNLVGLLDGYFHHEAQVEGGQHLNVNVMNREMLLDAIEHPENYPNLTIRVSGYAVRFNALTREQQQDVISRTFTQAM
>CP033348.1|QAX49357.1|635546_636911_+|L-serine-ammonia-lyase
MISAFDIFKIGIGPSSSHTVGPMNAGKCFIDRLIDSGDLPRTTRITVDLYGSLSLTGKGHATDTAVIMGLAGNTPQDVNIDSIPAFIQEVARSSRLSVAGGAHVVDFPVADSIFFHAETLARHENGMRITAWHGQTPLLHKTYYSIGGGFIVEEERFGQSHDVEKSVPYDFHSASELLTLCERQGLSVSGLMMQNELALRSKEQIDAGFARIWQVMATGIERGMNTEGVLPGPLNVPRRAVALRRLLVSSDNLSRDPMNVIDWINMFALAVSEENAAGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNANSIARYLLSAGAIGMLYKMNASISGAEVGCQGEVGVACSMAAAGLTELLGGSPAQVCIAAEIAMEHNLGLTCDPVAGQVQIPCIERNAINAVKAVNAARMALRRTSEPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIKVVCG
>CP033348.1|QAX53089.1|637226_638558_+|HAAAP-family-serine/threonine-permease
MESASNTSVILDASAPARRAGMTESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSIIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNIGALPPMALLIKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAGWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKIKENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYKGASLYLIIITGLLLCVSPFLAFS
>CP033348.1|QAX49358.1|638583_639894_+|serine-dehydratase-subunit-alpha-family-protein
MFESKINPLWQSFILAVQEEVKPALGCTEPISLALAAAAAAAELDGTVERIDAWVSPNLMKNGMGVTVPGTGMVGLPIAAALGALGGDAKAGLEVLKDASAKAVADAKAMLAAGHVAVMLQEPCNDILFSRAKVYSGDSWACVTIVGDHTNIVRIETDKGVVFTQADNAQEEEKTSPLGVLSHTSLEEILAFVNAVPFDAIRFILDAARLNGALSQEGLRGSWGLHIGSTLAKQCDRGLLAKDLSTAILIRTSAASDARMGGATLPAMSNSGSGNQGITATVPVMVVAEHVGADDERLARALMLSHLSAIYIHHQLPRLSALCAATTAAMGAAAGMAWLIDGRYDTIAMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHNVEQSIANLCSLACRSMQQTDKQIIEIMASKAH
>CP033348.1|QAX49359.1|640006_640171_-|hypothetical-protein
MSKKSAKKRQPVVKPAVQETMSATVPLGYEEMLTELEAIVADAEARLAEEEAAA
>CP033348.1|QAX49360.1|640194_640896_-|pirin-family-protein
MITTRTAKQCGQADYGWLQARYTFSFGHYFDPTLLGYASLRVLNQEVLAPGASFQPRTYPKVDILNLILDGEAEYRDSDGNHVQAKAGEALLLAAQPGISYSEHNLSKVKPLTRMQLWLDACPERENALVQKIPLSTAQQQLLASPDGEQNSLQLRQQVWVHHITLEKGESLNFQLHGPRAYLQSIHGTFHAMTHNEEREALTCGDGAFIRDEPNITLVADTPLRALLVDLPV

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Crispr_ID: CP033348_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033348_2

952391-953273

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

14 spacers

The CRISPR arrays of CP033348_2

>merge|CP033348|2|952391-953273|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGGTGGATATGCTGGCCGAGAAGGTTGGAACAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGACTACCCGGCATTTGTGGACGCATATCGGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCTTCCAGTTTTTTCCCTGCCTTTTGGGCGGCGGTGTTCCCCGCGCCAGCGGGGATAAACCGTACCTGACGCTGATCCAGTCGATCGCGCTGCTGTGTTCCCCGCGCCAGCGGGGATAAACCGATTTTCTTTGCGCCCGTACTCAACGTGGGAGGGTGTTCCCCGCGCCAGCGGGGATAAACCATCGCCCCGAGGTCGTTCACGACGTCCTCGTGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTACTCCAGACAATAGAGCGCCTCACCACTGTGTTCCCCGCGCCAGCGGGGATAAACCGCATAGGGGCCGCAGAAGTTGCCACAACCACAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGTCAATGTTGATGCCGGGGTGTGTTGTTACGTGTTCCCCGCGCCAGCGGGGATAAACCGGGAACTCATGCTTTTACCTGATGCGGCGGCACGTGTTCCCCGTGCCAGCGGGGATAAACCGCGAGGCGGCATCAAAGACGACGAAACACCATGGTGTTCCCCGCGCCAGCGGGGATAAACCGGATTTTCCCGCGTTGGTTGTATGCCGTGCGTGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCGTATTAAACGGGCAGATCGAGGAAACAACGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCGTGGTGTATATCGGTCTTGATGCGTTGTCGTGTTCCCCGCGCCAGCGGGGATAGCCGT

>CP033348|2|2|952391-953211|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGTGGATATGCTGGCCGAGAAGGTTGGAACAGA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGACTACCCGGCATTTGTGGACGCATATCGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCTTCCAGTTTTTTCCCTGCCTTTTGGGCGGCG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTACCTGACGCTGATCCAGTCGATCGCGCTGCT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GATTTTCTTTGCGCCCGTACTCAACGTGGGAGG
GTGTTCCCCGCGCCAGCGGGGATAAACC	ATCGCCCCGAGGTCGTTCACGACGTCCTCGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGTTACTCCAGACAATAGAGCGCCTCACCACT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCATAGGGGCCGCAGAAGTTGCCACAACCACAA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGGGTCAATGTTGATGCCGGGGTGTGTTGTTAC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGGAACTCATGCTTTTACCTGATGCGGCGGCAC
GTGTTCCCCGTGCCAGCGGGGATAAACC	GCGAGGCGGCATCAAAGACGACGAAACACCATG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGATTTTCCCGCGTTGGTTGTATGCCGTGCGTG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGCGTATTAAACGGGCAGATCGAGGAAACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACC

>CP033348|2|2|952391-953273|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGGATATGCTGGCCGAGAAGGTTGGAACAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACTACCCGGCATTTGTGGACGCATATCGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTCCAGTTTTTTCCCTGCCTTTTGGGCGGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACCTGACGCTGATCCAGTCGATCGCGCTGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTCTTTGCGCCCGTACTCAACGTGGGAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCA	TCGCCCCGAGGTCGTTCACGACGTCCTCGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTACTCCAGACAATAGAGCGCCTCACCACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATAGGGGCCGCAGAAGTTGCCACAACCACAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTCAATGTTGATGCCGGGGTGTGTTGTTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAACTCATGCTTTTACCTGATGCGGCGGCAC
GTGTTCCCCGTGCCAGCGGGGATAAACCG	CGAGGCGGCATCAAAGACGACGAAACACCATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATTTTCCCGCGTTGGTTGTATGCCGTGCGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGTATTAAACGGGCAGATCGAGGAAACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGTGGTGTATATCGGTCTTGATGCGTTGTC
GTGTTCCCCGCGCCAGCGGGGATAGCCGT

>CP033348|2|1|952391-953273|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGGATATGCTGGCCGAGAAGGTTGGAACAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACTACCCGGCATTTGTGGACGCATATCGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTCCAGTTTTTTCCCTGCCTTTTGGGCGGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACCTGACGCTGATCCAGTCGATCGCGCTGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTCTTTGCGCCCGTACTCAACGTGGGAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCA	TCGCCCCGAGGTCGTTCACGACGTCCTCGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTACTCCAGACAATAGAGCGCCTCACCACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATAGGGGCCGCAGAAGTTGCCACAACCACAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTCAATGTTGATGCCGGGGTGTGTTGTTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAACTCATGCTTTTACCTGATGCGGCGGCAC
GTGTTCCCCGTGCCAGCGGGGATAAACCG	CGAGGCGGCATCAAAGACGACGAAACACCATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATTTTCCCGCGTTGGTTGTATGCCGTGCGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGTATTAAACGGGCAGATCGAGGAAACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGTGGTGTATATCGGTCTTGATGCGTTGTC
GTGTTCCCCGCGCCAGCGGGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
CP033348.1\|QAX49659.1\|956840_958553_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
CP033348.1\|QAX49658.1\|955041_956841_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
CP033348.1\|QAX49663.1\|965118_966027_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP033348.1\|QAX53100.1\|954546_954717_+\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	unknown
CP033348.1\|QAX53101.1\|958509_958728_-\|hypothetical-protein	unknown	unknown	unknown
CP033348.1\|QAX49650.1\|945853_946210_+\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	unknown	unknown	gnl\|CDD\|226136
CP033348.1\|QAX49661.1\|959601_960555_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
CP033348.1\|QAX49652.1\|947240_948041_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP033348.1\|QAX49651.1\|946175_946472_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
CP033348.1\|QAX49647.1\|939374_942131_-\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
CP033348.1\|QAX49648.1\|942188_943484_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
CP033348.1\|QAX49653.1\|948268_949906_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
CP033348.1\|QAX49660.1\|958654_959389_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP033348.1\|QAX49655.1\|951422_952094_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP033348.1\|QAX49657.1\|954255_954618_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP033348.1\|QAX49662.1\|963821_964868_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP033348.1\|QAX49646.1\|938188_939331_+\|glycerate-kinase	unknown	unknown	gnl\|CDD\|224840
CP033348.1\|QAX49649.1\|943535_945770_+\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
CP033348.1\|QAX49654.1\|949988_951287_+\|enolase	unknown	unknown	gnl\|CDD\|234617
CP033348.1\|QAX49656.1\|953370_954168_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158

Protein	Function_ID	Function_description	E-value
CP033348.1\|QAX49659.1\|956840_958553_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP033348.1\|QAX49658.1\|955041_956841_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP033348.1\|QAX49663.1\|965118_966027_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP033348.1\|QAX49650.1\|945853_946210_+\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	gnl\|CDD\|226136	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription].	6.12601e-20
CP033348.1\|QAX49661.1\|959601_960555_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP033348.1\|QAX49652.1\|947240_948041_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.52469e-158
CP033348.1\|QAX49651.1\|946175_946472_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	1.63617e-13
CP033348.1\|QAX49647.1\|939374_942131_-\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
CP033348.1\|QAX49648.1\|942188_943484_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
CP033348.1\|QAX49653.1\|948268_949906_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP033348.1\|QAX49660.1\|958654_959389_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	4.40339e-138
CP033348.1\|QAX49655.1\|951422_952094_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
CP033348.1\|QAX49657.1\|954255_954618_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
CP033348.1\|QAX49662.1\|963821_964868_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP033348.1\|QAX49646.1\|938188_939331_+\|glycerate-kinase	gnl\|CDD\|224840	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism].	0
CP033348.1\|QAX49649.1\|943535_945770_+\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
CP033348.1\|QAX49654.1\|949988_951287_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP033348.1\|QAX49656.1\|953370_954168_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	1.92352e-102

>CP033348.1|QAX49655.1|951422_952094_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>CP033348.1|QAX49654.1|949988_951287_+|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP033348.1|QAX49653.1|948268_949906_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>CP033348.1|QAX49652.1|947240_948041_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSFPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>CP033348.1|QAX49651.1|946175_946472_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MRMVKLTPKASEDLENIWHYGWQHFGEIQADRYINHLSEIFSIMSANNIGTPRPELGEYIYALPFKRHIIYFIQSVTEVIVIRILSQNQDAGKHVNWL
>CP033348.1|QAX49650.1|945853_946210_+|type-II-toxin-antitoxin-system-ParD-family-antitoxin
MFLTYISFPVYSYVRFILTVEAVMARTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQAESRLQALRELLAEGLNSGEPQAWEKDAFLRKVKTGMIKPDENGKINAKGQ
>CP033348.1|QAX49649.1|943535_945770_+|GTP-diphosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNIQAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGG
>CP033348.1|QAX49648.1|942188_943484_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLAALLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVIGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>CP033348.1|QAX49647.1|939374_942131_-|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESAIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHPEPLLMDTSKITMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLVHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAKKILG
>CP033348.1|QAX49646.1|938188_939331_+|glycerate-kinase
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVEAMVEATAGRIVHVEVTGPLGHRVNAFYGLSGDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGNDIAQGGIGLETLASIDISGLDKRLSACHIEVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALTRYAHLIARDLHVDVLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGSLTADVGVVHEHGLDAVFSVIYTICTLEDALKNASENVRMTARNVAATLKAGQQLR
>CP033348.1|QAX49656.1|953370_954168_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSAKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>CP033348.1|QAX49657.1|954255_954618_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>CP033348.1|QAX53100.1|954546_954717_+|6-pyruvoyl-tetrahydrobiopterin-synthase
MPFRHVRQAVSGFKGEIFIQRGGHDELSGNKKTAVGYRKAHFLSLTKTILRLVTGN
>CP033348.1|QAX49658.1|955041_956841_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMSGITLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVMVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVESYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASSQAETENEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>CP033348.1|QAX49659.1|956840_958553_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIEKLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAELGLVGKAPGRYNVHLGGNRMGTRIPRMYRENITESEILDSVDELVGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>CP033348.1|QAX53101.1|958509_958728_-|hypothetical-protein
MVSANASTRLTFGSSFRAFRSSLDISSSRYTLPDGASLIRPTRAVGRIRHLCRHPAIQVIPRNHARDRAPGE
>CP033348.1|QAX49660.1|958654_959389_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVNRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPGIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP033348.1|QAX49661.1|959601_960555_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNIEDINKIYAFKRLQHLACPAHQDLFTIKLDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNTQIKAAVYEMMRPAEAPDHPLVEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHTYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>CP033348.1|QAX49662.1|963821_964868_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>CP033348.1|QAX49663.1|965118_966027_+|sulfate-adenylyltransferase-subunit-2
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF

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Crispr_ID: CP033348_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033348_3

962680-963807

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAAC	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

18 spacers

The CRISPR arrays of CP033348_3

>merge|CP033348|3|962680-963807|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACTGCCAGCGGAGAGCGAGCTATACCAGGCTCAATCGTGTTCCCCGCGCCAGCGGGGATAAACTGTCCGGAAAATCTACCGTTCCAGGGCGGGGCCGGTGTTCCCCGCGCCAGCGGGGATAAACTGGGAACCAAGTATACGCGTAGACAGCGTCAACGGTGTTCCCCGCGCCAGCGGGGATAAACCGGAATTGGCGTATCTGTGTCTTGCCAGACAGGGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTAGACCACCTCTTTCGATATGTGAGTGAAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTAGGGAAGGTACTCCTGGCTAATTCTTTTGGTGTTCCCCGCGCCAGCGGGGATAAACCGACATAATCCCCATGTACATAATTTATGCTCCGGTGTTCCCCGCGCCAGCGGGGATAAACCGATCCAGCAGAGCTACAGGAACGCCGCAAGGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGATCCGGGCATTTGAATATTGGGCTAAAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTAAATGCATCGCGATCCCTTGCAATTATAACGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGGATCCGTCATCGGTCGTGGTTCACTGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCACGTTTACCGTTCCGGCTGGGGTTTATCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCGGATCCACGATAATTTTGTCGTTATGTATGTGTTCCCCGCGCCAGCGGGGATAAACCGTCCCTGCTGGCCGTTCTGGAATTGCGTAGCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGAGCCTGACCAGGATTTTTCCGCCGTGTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGAATTGCAGGAGTGGTTTATCGAGTGTTTACAGTGTTCCCCGCGCCAGCGGGGATAAACCGAATCAACGGATCTTGCTAATGTAGTTTCTGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGGGCGTTCCGCAGTCGACAAGGGCTGAAAAATGTTCCCCGCGTCAGCGGGGATAAACAC

>CP033348|3|3|962680-963805|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAAC	TGCCAGCGGAGAGCGAGCTATACCAGGCTCAATC
GTGTTCCCCGCGCCAGCGGGGATAAAC	TGTCCGGAAAATCTACCGTTCCAGGGCGGGGCCG
GTGTTCCCCGCGCCAGCGGGGATAAAC	TGGGAACCAAGTATACGCGTAGACAGCGTCAACG
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGGAATTGGCGTATCTGTGTCTTGCCAGACAGGG
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGCGTAGACCACCTCTTTCGATATGTGAGTGAAG
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGGTTAGGGAAGGTACTCCTGGCTAATTCTTTTG
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGACATAATCCCCATGTACATAATTTATGCTCCG
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGATCCAGCAGAGCTACAGGAACGCCGCAAGGCC
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGTTGATCCGGGCATTTGAATATTGGGCTAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGTTAAATGCATCGCGATCCCTTGCAATTATAAC
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGCCGGGATCCGTCATCGGTCGTGGTTCACTGCA
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGGGCACGTTTACCGTTCCGGCTGGGGTTTATCGT
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGGGCGGATCCACGATAATTTTGTCGTTATGTAT
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGTCCCTGCTGGCCGTTCTGGAATTGCGTAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGCCGGAGCCTGACCAGGATTTTTCCGCCGTGTA
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGGAATTGCAGGAGTGGTTTATCGAGTGTTTACA
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGAATCAACGGATCTTGCTAATGTAGTTTCTGCA
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGAGGGGCGTTCCGCAGTCGACAAGGGCTGAAAA
ATGTTCCCCGCGTCAGCGGGGATAAAC

>CP033348|3|3|962680-963807|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACTG	CCAGCGGAGAGCGAGCTATACCAGGCTCAATC
GTGTTCCCCGCGCCAGCGGGGATAAACTG	TCCGGAAAATCTACCGTTCCAGGGCGGGGCCG
GTGTTCCCCGCGCCAGCGGGGATAAACTG	GGAACCAAGTATACGCGTAGACAGCGTCAACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAATTGGCGTATCTGTGTCTTGCCAGACAGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTAGACCACCTCTTTCGATATGTGAGTGAAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTAGGGAAGGTACTCCTGGCTAATTCTTTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACATAATCCCCATGTACATAATTTATGCTCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCAGCAGAGCTACAGGAACGCCGCAAGGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATCCGGGCATTTGAATATTGGGCTAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTAAATGCATCGCGATCCCTTGCAATTATAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGGATCCGTCATCGGTCGTGGTTCACTGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCACGTTTACCGTTCCGGCTGGGGTTTATCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGGATCCACGATAATTTTGTCGTTATGTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCCTGCTGGCCGTTCTGGAATTGCGTAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGAGCCTGACCAGGATTTTTCCGCCGTGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAATTGCAGGAGTGGTTTATCGAGTGTTTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCAACGGATCTTGCTAATGTAGTTTCTGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGACAAGGGCTGAAAA
ATGTTCCCCGCGTCAGCGGGGATAAACAC

>CP033348|3|2|962680-963807|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACTG	CCAGCGGAGAGCGAGCTATACCAGGCTCAATC
GTGTTCCCCGCGCCAGCGGGGATAAACTG	TCCGGAAAATCTACCGTTCCAGGGCGGGGCCG
GTGTTCCCCGCGCCAGCGGGGATAAACTG	GGAACCAAGTATACGCGTAGACAGCGTCAACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAATTGGCGTATCTGTGTCTTGCCAGACAGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTAGACCACCTCTTTCGATATGTGAGTGAAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTAGGGAAGGTACTCCTGGCTAATTCTTTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACATAATCCCCATGTACATAATTTATGCTCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCAGCAGAGCTACAGGAACGCCGCAAGGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATCCGGGCATTTGAATATTGGGCTAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTAAATGCATCGCGATCCCTTGCAATTATAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGGATCCGTCATCGGTCGTGGTTCACTGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCACGTTTACCGTTCCGGCTGGGGTTTATCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGGATCCACGATAATTTTGTCGTTATGTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCCTGCTGGCCGTTCTGGAATTGCGTAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGAGCCTGACCAGGATTTTTCCGCCGTGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAATTGCAGGAGTGGTTTATCGAGTGTTTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCAACGGATCTTGCTAATGTAGTTTCTGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGACAAGGGCTGAAAA
ATGTTCCCCGCGTCAGCGGGGATAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
CP033348.1\|QAX49659.1\|956840_958553_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
CP033348.1\|QAX49658.1\|955041_956841_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
CP033348.1\|QAX49668.1\|968962_969673_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
CP033348.1\|QAX53100.1\|954546_954717_+\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	unknown
CP033348.1\|QAX49669.1\|969672_970152_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP033348.1\|QAX49664.1\|966036_967476_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
CP033348.1\|QAX49670.1\|970148_971198_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
CP033348.1\|QAX49666.1\|968085_968442_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
CP033348.1\|QAX49663.1\|965118_966027_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP033348.1\|QAX53101.1\|958509_958728_-\|hypothetical-protein	unknown	unknown	unknown
CP033348.1\|QAX49660.1\|958654_959389_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP033348.1\|QAX49655.1\|951422_952094_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP033348.1\|QAX49654.1\|949988_951287_+\|enolase	unknown	unknown	gnl\|CDD\|234617
CP033348.1\|QAX49661.1\|959601_960555_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
CP033348.1\|QAX49671.1\|971178_971940_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
CP033348.1\|QAX49667.1\|968632_968944_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
CP033348.1\|QAX49657.1\|954255_954618_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP033348.1\|QAX49662.1\|963821_964868_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP033348.1\|QAX49665.1\|967462_968068_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
CP033348.1\|QAX49656.1\|953370_954168_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158

Protein	Function_ID	Function_description	E-value
CP033348.1\|QAX49659.1\|956840_958553_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP033348.1\|QAX49660.1\|958654_959389_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	4.40339e-138
CP033348.1\|QAX49668.1\|968962_969673_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.25703e-119
CP033348.1\|QAX49669.1\|969672_970152_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	3.20925e-104
CP033348.1\|QAX49667.1\|968632_968944_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
CP033348.1\|QAX49666.1\|968085_968442_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	9.96163e-49
CP033348.1\|QAX49664.1\|966036_967476_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
CP033348.1\|QAX49670.1\|970148_971198_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
CP033348.1\|QAX49663.1\|965118_966027_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP033348.1\|QAX49655.1\|951422_952094_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
CP033348.1\|QAX49654.1\|949988_951287_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP033348.1\|QAX49661.1\|959601_960555_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP033348.1\|QAX49671.1\|971178_971940_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
CP033348.1\|QAX49658.1\|955041_956841_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP033348.1\|QAX49657.1\|954255_954618_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
CP033348.1\|QAX49662.1\|963821_964868_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP033348.1\|QAX49665.1\|967462_968068_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	3.92486e-146
CP033348.1\|QAX49656.1\|953370_954168_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	1.92352e-102

>CP033348.1|QAX49661.1|959601_960555_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNIEDINKIYAFKRLQHLACPAHQDLFTIKLDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNTQIKAAVYEMMRPAEAPDHPLVEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHTYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>CP033348.1|QAX49660.1|958654_959389_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVNRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPGIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP033348.1|QAX53101.1|958509_958728_-|hypothetical-protein
MVSANASTRLTFGSSFRAFRSSLDISSSRYTLPDGASLIRPTRAVGRIRHLCRHPAIQVIPRNHARDRAPGE
>CP033348.1|QAX49659.1|956840_958553_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIEKLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAELGLVGKAPGRYNVHLGGNRMGTRIPRMYRENITESEILDSVDELVGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>CP033348.1|QAX49658.1|955041_956841_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMSGITLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVMVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVESYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASSQAETENEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>CP033348.1|QAX53100.1|954546_954717_+|6-pyruvoyl-tetrahydrobiopterin-synthase
MPFRHVRQAVSGFKGEIFIQRGGHDELSGNKKTAVGYRKAHFLSLTKTILRLVTGN
>CP033348.1|QAX49657.1|954255_954618_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>CP033348.1|QAX49656.1|953370_954168_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSAKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>CP033348.1|QAX49655.1|951422_952094_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>CP033348.1|QAX49654.1|949988_951287_+|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP033348.1|QAX49662.1|963821_964868_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>CP033348.1|QAX49663.1|965118_966027_+|sulfate-adenylyltransferase-subunit-2
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>CP033348.1|QAX49664.1|966036_967476_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEAYAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQVDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>CP033348.1|QAX49665.1|967462_968068_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLDGEQLVTNLVSQLLDLLRRRDIIRS
>CP033348.1|QAX49666.1|968085_968442_+|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLVVGALFGALFIWLLG
>CP033348.1|QAX49667.1|968632_968944_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>CP033348.1|QAX49668.1|968962_969673_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQAECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQISVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>CP033348.1|QAX49669.1|969672_970152_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDEVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>CP033348.1|QAX49670.1|970148_971198_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>CP033348.1|QAX49671.1|971178_971940_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	MK448230	Klebsiella phage ST16-OXA48phi5.2, complete genome	16319-16350	4	0.875
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	MK448233	Klebsiella phage ST11-VIM1phi8.1, complete genome	12387-12418	4	0.875
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	MK448235	Klebsiella phage ST512-KPC3phi13.1, complete genome	12387-12418	4	0.875
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	MK448230	Klebsiella phage ST16-OXA48phi5.2, complete genome	16317-16350	5	0.853
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	MK448233	Klebsiella phage ST11-VIM1phi8.1, complete genome	12385-12418	5	0.853
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	MK448235	Klebsiella phage ST512-KPC3phi13.1, complete genome	12385-12418	5	0.853
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_KP763470	Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence	44574-44607	5	0.853
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	MN543575	Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_fusion, complete sequence	301266-301297	5	0.844
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	MN543576	Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_vir, complete sequence	11610-11641	5	0.844
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP048109	Klebsiella michiganensis strain BD177 plasmid unnamed1	163080-163111	5	0.844
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP024517	Klebsiella pneumoniae strain KSB1_10J plasmid unnamed2, complete sequence	11602-11633	5	0.844
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP024497	Klebsiella pneumoniae strain KSB1_7E plasmid unnamed1, complete sequence	11602-11633	5	0.844
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP024501	Klebsiella pneumoniae strain KSB1_4E plasmid unnamed2, complete sequence	11602-11633	5	0.844
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP032356	Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_Vir, complete sequence	11610-11641	5	0.844
CP033348_2	2.17\|952603\|32\|CP033348\|CRISPRCasFinder,CRT	952603-952634	32	NZ_CP032827	Sphingomonas sp. YZ-8 plasmid unnamed2, complete sequence	72213-72244	6	0.812
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	MN543575	Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_fusion, complete sequence	301264-301297	6	0.824
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	MN543576	Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_vir, complete sequence	11608-11641	6	0.824
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP048109	Klebsiella michiganensis strain BD177 plasmid unnamed1	163080-163113	6	0.824
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP024517	Klebsiella pneumoniae strain KSB1_10J plasmid unnamed2, complete sequence	11600-11633	6	0.824
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP024497	Klebsiella pneumoniae strain KSB1_7E plasmid unnamed1, complete sequence	11600-11633	6	0.824
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP024501	Klebsiella pneumoniae strain KSB1_4E plasmid unnamed2, complete sequence	11600-11633	6	0.824
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP032356	Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_Vir, complete sequence	11608-11641	6	0.824
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_KP763470	Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence	44574-44605	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP048109	Klebsiella michiganensis strain BD177 plasmid unnamed1	160711-160742	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP024517	Klebsiella pneumoniae strain KSB1_10J plasmid unnamed2, complete sequence	13971-14002	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP024497	Klebsiella pneumoniae strain KSB1_7E plasmid unnamed1, complete sequence	13971-14002	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP024501	Klebsiella pneumoniae strain KSB1_4E plasmid unnamed2, complete sequence	13971-14002	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	MK972697	Salmonella phage SF10, complete genome	9747-9778	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	MK972696	Salmonella phage Si3 KFo-2019, complete genome	9612-9643	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	MK972695	Salmonella phage SI5, complete genome	14278-14309	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	MK972688	Salmonella phage SI8, complete genome	25831-25862	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	MK972689	Salmonella phage SF6, complete genome	12511-12542	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_KY270853	Raoultella ornithinolytica strain YNKP001 plasmid pYNKP001-dfrA, complete sequence	107851-107882	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	MN175386	Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence	227955-227986	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_KX839207	Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence	31275-31306	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP021328	Raoultella ornithinolytica strain Ro24724 plasmid pRo24724, complete sequence	242289-242320	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP025467	Klebsiella pneumoniae strain JS187 plasmid p187-1, complete sequence	57481-57512	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP019048	Klebsiella pneumoniae subsp. pneumoniae strain RJA166 plasmid pRJA166a, complete sequence	171755-171786	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NC_018107	Klebsiella michiganensis E718 plasmid pKOX_R1, complete sequence	282927-282958	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP022441	Klebsiella sp. LY plasmid unnamed3, complete sequence	117157-117188	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	KU318421	Klebsiella pneumoniae strain KP04 plasmid pKP04VIM, complete sequence	112897-112928	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NC_023911	Raoultella planticola strain KpNDM1 plasmid pKpNDM1, complete sequence	60843-60874	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP025964	Klebsiella pneumoniae strain WCHKP34 plasmid pIMP4_LL34, complete sequence	248400-248431	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP038277	Raoultella ornithinolytica strain WLK218 plasmid pWLK-238550, complete sequence	58180-58211	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP024641	Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence	133695-133726	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP046614	Klebsiella pneumoniae strain WCGKP294 plasmid pWCGKP294-2, complete sequence	113422-113453	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP026014	Klebsiella variicola strain 13450 plasmid p13450-1, complete sequence	193224-193255	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP026019	Klebsiella pneumoniae strain 13190 plasmid p13190-1, complete sequence	44924-44955	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_MF344561	Klebsiella pneumoniae strain 11219 plasmid p11219-IMP, complete sequence	113968-113999	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_MF344566	Klebsiella pneumoniae strain A324 plasmid pA324-IMP, complete sequence	110211-110242	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_MF344565	Klebsiella pneumoniae strain 19051 plasmid p19051-IMP, complete sequence	70142-70173	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_MF344562	Klebsiella pneumoniae strain 12208 plasmid p12208-IMP, complete sequence	118864-118895	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_MF344567	Klebsiella pneumoniae strain A708 plasmid pA708-IMP, complete sequence	112804-112835	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_MF344563	Klebsiella pneumoniae strain 13190 plasmid p13190-VIM, complete sequence	112812-112843	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_MF344564	Klebsiella pneumoniae strain 13450 plasmid p13450-IMP, complete sequence	113967-113998	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP026369	Klebsiella quasipneumoniae strain A708 plasmid pA708-1, complete sequence	8201-8232	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	MN661402	Klebsiella quasipneumoniae strain KP18-31 plasmid pKP18-31-IMP,KPC, complete sequence	283065-283096	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	MT682064	Klebsiella virus KpV2811, complete genome	44539-44570	6	0.812
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	MK422450	Klebsiella phage ST13-OXA48phi12.4, complete genome	33024-33055	6	0.812
CP033348_2	2.4\|952602\|33\|CP033348\|PILER-CR	952602-952634	33	NZ_CP032827	Sphingomonas sp. YZ-8 plasmid unnamed2, complete sequence	72213-72245	7	0.788
CP033348_2	2.17\|952603\|32\|CP033348\|CRISPRCasFinder,CRT	952603-952634	32	NZ_CP015420	Rhodovulum sulfidophilum DSM 1374 plasmid unnamed2, complete sequence	57687-57718	7	0.781
CP033348_2	2.27\|953213\|32\|CP033348\|CRISPRCasFinder,CRT	953213-953244	32	MF495478	Aeromonas salmonicida plasmid pS121-1b, complete sequence	117450-117481	7	0.781
CP033348_2	2.27\|953213\|32\|CP033348\|CRISPRCasFinder,CRT	953213-953244	32	NZ_CP038450	Aeromonas media strain R50-22 plasmid pAeme6, complete sequence	31198-31229	7	0.781
CP033348_2	2.27\|953213\|32\|CP033348\|CRISPRCasFinder,CRT	953213-953244	32	NZ_CP022170	Aeromonas salmonicida strain S121 plasmid pS121-1a, complete sequence	125043-125074	7	0.781
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP048109	Klebsiella michiganensis strain BD177 plasmid unnamed1	160711-160744	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP024517	Klebsiella pneumoniae strain KSB1_10J plasmid unnamed2, complete sequence	13969-14002	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP024497	Klebsiella pneumoniae strain KSB1_7E plasmid unnamed1, complete sequence	13969-14002	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP024501	Klebsiella pneumoniae strain KSB1_4E plasmid unnamed2, complete sequence	13969-14002	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_KY270853	Raoultella ornithinolytica strain YNKP001 plasmid pYNKP001-dfrA, complete sequence	107849-107882	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	MN175386	Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence	227953-227986	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_KX839207	Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence	31275-31308	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP021328	Raoultella ornithinolytica strain Ro24724 plasmid pRo24724, complete sequence	242289-242322	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP025467	Klebsiella pneumoniae strain JS187 plasmid p187-1, complete sequence	57479-57512	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP019048	Klebsiella pneumoniae subsp. pneumoniae strain RJA166 plasmid pRJA166a, complete sequence	171755-171788	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NC_018107	Klebsiella michiganensis E718 plasmid pKOX_R1, complete sequence	282925-282958	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP022441	Klebsiella sp. LY plasmid unnamed3, complete sequence	117157-117190	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	KU318421	Klebsiella pneumoniae strain KP04 plasmid pKP04VIM, complete sequence	112895-112928	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NC_023911	Raoultella planticola strain KpNDM1 plasmid pKpNDM1, complete sequence	60841-60874	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP025964	Klebsiella pneumoniae strain WCHKP34 plasmid pIMP4_LL34, complete sequence	248398-248431	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP038277	Raoultella ornithinolytica strain WLK218 plasmid pWLK-238550, complete sequence	58178-58211	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP024641	Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence	133693-133726	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP046614	Klebsiella pneumoniae strain WCGKP294 plasmid pWCGKP294-2, complete sequence	113420-113453	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP026014	Klebsiella variicola strain 13450 plasmid p13450-1, complete sequence	193222-193255	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP026019	Klebsiella pneumoniae strain 13190 plasmid p13190-1, complete sequence	44922-44955	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_MF344561	Klebsiella pneumoniae strain 11219 plasmid p11219-IMP, complete sequence	113966-113999	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_MF344566	Klebsiella pneumoniae strain A324 plasmid pA324-IMP, complete sequence	110209-110242	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_MF344565	Klebsiella pneumoniae strain 19051 plasmid p19051-IMP, complete sequence	70140-70173	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_MF344562	Klebsiella pneumoniae strain 12208 plasmid p12208-IMP, complete sequence	118862-118895	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_MF344567	Klebsiella pneumoniae strain A708 plasmid pA708-IMP, complete sequence	112802-112835	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_MF344563	Klebsiella pneumoniae strain 13190 plasmid p13190-VIM, complete sequence	112810-112843	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_MF344564	Klebsiella pneumoniae strain 13450 plasmid p13450-IMP, complete sequence	113965-113998	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP026369	Klebsiella quasipneumoniae strain A708 plasmid pA708-1, complete sequence	8201-8234	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	MN661402	Klebsiella quasipneumoniae strain KP18-31 plasmid pKP18-31-IMP,KPC, complete sequence	283063-283096	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	MT682064	Klebsiella virus KpV2811, complete genome	44539-44572	7	0.794
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	MK422450	Klebsiella phage ST13-OXA48phi12.4, complete genome	33024-33057	7	0.794
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP027613	Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed1, complete sequence	88668-88699	7	0.781
CP033348_3	3.29\|963319\|32\|CP033348\|CRISPRCasFinder,CRT	963319-963350	32	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	1032808-1032839	7	0.781
CP033348_3	3.33\|963564\|32\|CP033348\|CRISPRCasFinder,CRT	963564-963595	32	NZ_CP042496	Leclercia adecarboxylata strain E61 plasmid pE61_003, complete sequence	26988-27019	7	0.781
CP033348_3	3.33\|963564\|32\|CP033348\|CRISPRCasFinder,CRT	963564-963595	32	NZ_MH909330	Leclercia adecarboxylata strain 150707804 plasmid p707804-1FII, complete sequence	61407-61438	7	0.781
CP033348_2	2.3\|952541\|33\|CP033348\|PILER-CR	952541-952573	33	NZ_CP049031	Fluviibacterium aquatile strain SC52 plasmid pSC52_3, complete sequence	178317-178349	8	0.758
CP033348_2	2.4\|952602\|33\|CP033348\|PILER-CR	952602-952634	33	MT701587	Burkholderia phage Magia, complete genome	3849-3881	8	0.758
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NC_015258	Polymorphum gilvum SL003B-26A1 plasmid pSL003B, complete sequence	49138-49170	8	0.758
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_AP022566	Mycolicibacterium alvei strain JCM 12272 plasmid pJCM12272, complete sequence	181076-181108	8	0.758
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NC_011990	Agrobacterium radiobacter K84 plasmid pAtK84b, complete sequence	121553-121585	8	0.758
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_CP030831	Neorhizobium sp. NCHU2750 plasmid pTiNCHU2750, complete sequence	47455-47487	8	0.758
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_MK439382	Agrobacterium tumefaciens strain CFBP2178 plasmid pTiCFBP2178, complete sequence	43404-43436	8	0.758
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_MK439383	Agrobacterium tumefaciens strain CFBP1935 plasmid pTiCFBP1935, complete sequence	43404-43436	8	0.758
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_MK318986	Agrobacterium rhizogenes strain C6.5 plasmid pTiC6.5, complete sequence	210114-210146	8	0.758
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_MK439384	Agrobacterium tumefaciens strain Kerr108 plasmid pTiKerr108, complete sequence	43404-43436	8	0.758
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_MK439381	Agrobacterium tumefaciens strain Sule1 plasmid pTiSule1, complete sequence	43404-43436	8	0.758
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_MF511177	Agrobacterium rhizogenes strain C5.7 plasmid pTiC5.7, complete sequence	210114-210146	8	0.758
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_KY000066	Agrobacterium deltaense strain CFBP7129 plasmid pTi_CFBP7129, complete sequence	190282-190314	8	0.758
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_KY000052	Agrobacterium tumefaciens strain CFBP7000 plasmid pTi_CFBP7000, complete sequence	153110-153142	8	0.758
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_KY000049	Agrobacterium rhizogenes strain CFBP4423 plasmid pTi_CFBP4423, complete sequence	101096-101128	8	0.758
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_KY000055	Agrobacterium rubi strain Tun159 plasmid pTi_Tun159, complete sequence	181803-181835	8	0.758
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_KY000043	Agrobacterium rhizogenes strain CFBP1905 plasmid pTi_CFBP1905, complete sequence	109076-109108	8	0.758
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_KY000048	Agrobacterium rhizogenes strain CFBP2746 plasmid pTi_CFBP2746, complete sequence	20612-20644	8	0.758
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_KY000053	Agrobacterium genomosp. 1 strain DC12-001 plasmid pTi_DC12-001, complete sequence	100960-100992	8	0.758
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_KY000054	Agrobacterium tumefaciens strain Tun154 plasmid pTi_Tun154, complete sequence	117861-117893	8	0.758
CP033348_2	2.17\|952603\|32\|CP033348\|CRISPRCasFinder,CRT	952603-952634	32	MT701587	Burkholderia phage Magia, complete genome	3850-3881	8	0.75
CP033348_2	2.18\|952664\|32\|CP033348\|CRISPRCasFinder,CRT	952664-952695	32	NC_013502	Rhodothermus marinus DSM 4252 plasmid pRMAR01, complete sequence	54003-54034	8	0.75
CP033348_2	2.18\|952664\|32\|CP033348\|CRISPRCasFinder,CRT	952664-952695	32	NC_015970	Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201, complete sequence	78716-78747	8	0.75
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NC_015258	Polymorphum gilvum SL003B-26A1 plasmid pSL003B, complete sequence	49138-49169	8	0.75
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_AP022566	Mycolicibacterium alvei strain JCM 12272 plasmid pJCM12272, complete sequence	181077-181108	8	0.75
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NC_011990	Agrobacterium radiobacter K84 plasmid pAtK84b, complete sequence	121553-121584	8	0.75
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_CP030831	Neorhizobium sp. NCHU2750 plasmid pTiNCHU2750, complete sequence	47455-47486	8	0.75
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_MK439382	Agrobacterium tumefaciens strain CFBP2178 plasmid pTiCFBP2178, complete sequence	43404-43435	8	0.75
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_MK439383	Agrobacterium tumefaciens strain CFBP1935 plasmid pTiCFBP1935, complete sequence	43404-43435	8	0.75
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_MK318986	Agrobacterium rhizogenes strain C6.5 plasmid pTiC6.5, complete sequence	210114-210145	8	0.75
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_MK439384	Agrobacterium tumefaciens strain Kerr108 plasmid pTiKerr108, complete sequence	43404-43435	8	0.75
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_MK439381	Agrobacterium tumefaciens strain Sule1 plasmid pTiSule1, complete sequence	43404-43435	8	0.75
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_MF511177	Agrobacterium rhizogenes strain C5.7 plasmid pTiC5.7, complete sequence	210114-210145	8	0.75
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_KY000066	Agrobacterium deltaense strain CFBP7129 plasmid pTi_CFBP7129, complete sequence	190282-190313	8	0.75
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_KY000052	Agrobacterium tumefaciens strain CFBP7000 plasmid pTi_CFBP7000, complete sequence	153111-153142	8	0.75
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_KY000049	Agrobacterium rhizogenes strain CFBP4423 plasmid pTi_CFBP4423, complete sequence	101097-101128	8	0.75
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_KY000055	Agrobacterium rubi strain Tun159 plasmid pTi_Tun159, complete sequence	181804-181835	8	0.75
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_KY000043	Agrobacterium rhizogenes strain CFBP1905 plasmid pTi_CFBP1905, complete sequence	109077-109108	8	0.75
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_KY000048	Agrobacterium rhizogenes strain CFBP2746 plasmid pTi_CFBP2746, complete sequence	20613-20644	8	0.75
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_KY000053	Agrobacterium genomosp. 1 strain DC12-001 plasmid pTi_DC12-001, complete sequence	100961-100992	8	0.75
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_KY000054	Agrobacterium tumefaciens strain Tun154 plasmid pTi_Tun154, complete sequence	117862-117893	8	0.75
CP033348_2	2.27\|953213\|32\|CP033348\|CRISPRCasFinder,CRT	953213-953244	32	NZ_CP048109	Klebsiella michiganensis strain BD177 plasmid unnamed1	11553-11584	8	0.75
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP027613	Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed1, complete sequence	88666-88699	8	0.765
CP033348_3	3.11\|963317\|34\|CP033348\|PILER-CR	963317-963350	34	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	1032808-1032841	8	0.765
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	24550-24581	8	0.75
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	CP053324	Salmonella enterica subsp. salamae serovar 40:c:e,n,z15 strain 2013K-0524 plasmid unnamed, complete sequence	37175-37206	8	0.75
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NC_006949	Enterobacteria phage ES18, complete genome	28620-28651	8	0.75
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	CP051275	Salmonella phage SW-37, complete genome	24070-24101	8	0.75
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	AY736146	Salmonella typhimurium bacteriophage ES18, complete sequence	28620-28651	8	0.75
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NC_047875	Salmonella phage UPF_BP1, complete genome	34743-34774	8	0.75
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	MN175386	Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence	229211-229242	8	0.75
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NC_004813	Enterobacteria phage BP-4795, complete genome	2570-2601	8	0.75
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	AJ556162	Phage BP-4795 complete genome	2570-2601	8	0.75
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP010632	Phaeobacter inhibens strain P78 plasmid pP78_c, complete sequence	58995-59026	8	0.75
CP033348_3	3.27\|963197\|32\|CP033348\|CRISPRCasFinder,CRT	963197-963228	32	MN871446	UNVERIFIED: Serratia phage KpLz-2_45, complete genome	211145-211176	8	0.75
CP033348_3	3.32\|963503\|32\|CP033348\|CRISPRCasFinder,CRT	963503-963534	32	NZ_CP044979	Bacillus thuringiensis strain BT62 plasmid pBT62A, complete sequence	326516-326547	8	0.75
CP033348_3	3.32\|963503\|32\|CP033348\|CRISPRCasFinder,CRT	963503-963534	32	NZ_CP044979	Bacillus thuringiensis strain BT62 plasmid pBT62A, complete sequence	332977-333008	8	0.75
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_CP026928	Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence	179392-179424	9	0.727
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_LR723673	Rhizobium flavum strain YW14 plasmid 4	95390-95422	9	0.727
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_CP015748	Shinella sp. HZN7 plasmid pShin-12, complete sequence	9583-9615	9	0.727
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_CP025505	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvC, complete sequence	396987-397019	9	0.727
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_CP022669	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR4, complete sequence	12382-12414	9	0.727
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_CP022669	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR4, complete sequence	327068-327100	9	0.727
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_CP050089	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence	323919-323951	9	0.727
CP033348_2	2.16\|952542\|32\|CP033348\|CRISPRCasFinder,CRT	952542-952573	32	NZ_CP049031	Fluviibacterium aquatile strain SC52 plasmid pSC52_3, complete sequence	178317-178348	9	0.719
CP033348_2	2.17\|952603\|32\|CP033348\|CRISPRCasFinder,CRT	952603-952634	32	NZ_AP014801	Rhodovulum sulfidophilum plasmid Plasmid1 DNA, complete genome, strain: DSM 2351	28457-28488	9	0.719
CP033348_2	2.17\|952603\|32\|CP033348\|CRISPRCasFinder,CRT	952603-952634	32	NZ_CP020385	Rhodovulum sp. MB263 plasmid pRSMBA, complete sequence	136288-136319	9	0.719
CP033348_2	2.17\|952603\|32\|CP033348\|CRISPRCasFinder,CRT	952603-952634	32	NZ_CP020040	Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence	144529-144560	9	0.719
CP033348_2	2.17\|952603\|32\|CP033348\|CRISPRCasFinder,CRT	952603-952634	32	NZ_AP022334	Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49b, complete sequence	255296-255327	9	0.719
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_CP026928	Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence	179392-179423	9	0.719
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_LR723673	Rhizobium flavum strain YW14 plasmid 4	95390-95421	9	0.719
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_CP015748	Shinella sp. HZN7 plasmid pShin-12, complete sequence	9584-9615	9	0.719
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_CP025505	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvC, complete sequence	396987-397018	9	0.719
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_CP022669	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR4, complete sequence	12383-12414	9	0.719
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_CP022669	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR4, complete sequence	327069-327100	9	0.719
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_CP010864	Marinovum algicola DG 898 plasmid pMaD9, complete sequence	59271-59302	9	0.719
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_CP050089	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence	323919-323950	9	0.719
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NC_010373	Methylobacterium sp. 4-46 plasmid pM44601, complete sequence	37332-37363	9	0.719
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	MN175386	Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence	229209-229242	9	0.735
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	MN543575	Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_fusion, complete sequence	304593-304624	9	0.719
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	MN543576	Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_vir, complete sequence	14937-14968	9	0.719
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP032356	Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_Vir, complete sequence	14937-14968	9	0.719
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP021432	Yoonia vestfoldensis strain SMR4r plasmid pSMR4r-1, complete sequence	19689-19720	9	0.719
CP033348_3	3.29\|963319\|32\|CP033348\|CRISPRCasFinder,CRT	963319-963350	32	AY986977	Xanthomonas campestris pv. pelargonii phage Xp15, complete genome	47238-47269	9	0.719
CP033348_3	3.29\|963319\|32\|CP033348\|CRISPRCasFinder,CRT	963319-963350	32	NC_007024	Xanthomonas phage Xp15, complete genome	47238-47269	9	0.719
CP033348_3	3.34\|963625\|32\|CP033348\|CRISPRCasFinder,CRT	963625-963656	32	LT960552	Yersinia phage fHe-Yen9-03 genome assembly, complete genome: monopartite	236687-236718	9	0.719
CP033348_3	3.34\|963625\|32\|CP033348\|CRISPRCasFinder,CRT	963625-963656	32	LR596615	Yersinia phage fHe-Yen9-04 genome assembly, chromosome: I	237895-237926	9	0.719
CP033348_3	3.34\|963625\|32\|CP033348\|CRISPRCasFinder,CRT	963625-963656	32	NC_042116	Yersinia phage fHe-Yen9-04 genome assembly, complete genome: monopartite	237895-237926	9	0.719
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	275503-275535	10	0.697
CP033348_2	2.6\|952724\|33\|CP033348\|PILER-CR	952724-952756	33	NZ_CP010864	Marinovum algicola DG 898 plasmid pMaD9, complete sequence	59271-59303	10	0.697
CP033348_2	2.17\|952603\|32\|CP033348\|CRISPRCasFinder,CRT	952603-952634	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	580211-580242	10	0.688
CP033348_2	2.17\|952603\|32\|CP033348\|CRISPRCasFinder,CRT	952603-952634	32	KY092480	Streptomyces phage Picard, complete genome	11703-11734	10	0.688
CP033348_2	2.19\|952725\|32\|CP033348\|CRISPRCasFinder,CRT	952725-952756	32	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	275504-275535	10	0.688
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP010632	Phaeobacter inhibens strain P78 plasmid pP78_c, complete sequence	58993-59026	10	0.706
CP033348_3	3.14\|963501\|34\|CP033348\|PILER-CR	963501-963534	34	NZ_CP044979	Bacillus thuringiensis strain BT62 plasmid pBT62A, complete sequence	326516-326549	10	0.706
CP033348_3	3.14\|963501\|34\|CP033348\|PILER-CR	963501-963534	34	NZ_CP044979	Bacillus thuringiensis strain BT62 plasmid pBT62A, complete sequence	332977-333010	10	0.706
CP033348_3	3.23\|962953\|32\|CP033348\|CRISPRCasFinder,CRT	962953-962984	32	KX911187	Rathayibacter phage NCPPB3778, complete genome	9370-9401	10	0.688
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	NZ_CP022925	Klebsiella pneumoniae strain ST307PT01 plasmid pJYC01B	24621-24652	10	0.688
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	KU160664	Arthrobacter phage Salgado, complete genome	57836-57867	10	0.688
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	MF140418	Arthrobacter phage LiSara, complete genome	58166-58197	10	0.688
CP033348_3	3.26\|963136\|32\|CP033348\|CRISPRCasFinder,CRT	963136-963167	32	KU160654	Arthrobacter phage Laroye, complete genome	58034-58065	10	0.688
CP033348_3	3.28\|963258\|32\|CP033348\|CRISPRCasFinder,CRT	963258-963289	32	MN871446	UNVERIFIED: Serratia phage KpLz-2_45, complete genome	274332-274363	10	0.688
CP033348_3	3.28\|963258\|32\|CP033348\|CRISPRCasFinder,CRT	963258-963289	32	MN871452	UNVERIFIED: Serratia phage KpZh_1, complete genome	96680-96711	10	0.688
CP033348_3	3.28\|963258\|32\|CP033348\|CRISPRCasFinder,CRT	963258-963289	32	MN871447	UNVERIFIED: Serratia phage KpLz_1_41, complete genome	38286-38317	10	0.688
CP033348_3	3.28\|963258\|32\|CP033348\|CRISPRCasFinder,CRT	963258-963289	32	MN871449	UNVERIFIED: Serratia phage KpXa_1, complete genome	218903-218934	10	0.688
CP033348_3	3.28\|963258\|32\|CP033348\|CRISPRCasFinder,CRT	963258-963289	32	MN871453	UNVERIFIED: Serratia phage KpZh_LPS_45, complete genome	263284-263315	10	0.688
CP033348_3	3.28\|963258\|32\|CP033348\|CRISPRCasFinder,CRT	963258-963289	32	MN871451	UNVERIFIED: Serratia phage KpYy_2_45, complete genome	268353-268384	10	0.688
CP033348_3	3.28\|963258\|32\|CP033348\|CRISPRCasFinder,CRT	963258-963289	32	MN871448	UNVERIFIED: Serratia phage KpSz_1, complete genome	264363-264394	10	0.688
CP033348_3	3.29\|963319\|32\|CP033348\|CRISPRCasFinder,CRT	963319-963350	32	NZ_CP012101	Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence	271482-271513	10	0.688
CP033348_3	3.29\|963319\|32\|CP033348\|CRISPRCasFinder,CRT	963319-963350	32	NZ_CP020952	Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence	475651-475682	10	0.688
CP033348_3	3.29\|963319\|32\|CP033348\|CRISPRCasFinder,CRT	963319-963350	32	NZ_CP031072	Bacillus mycoides strain BPN401 plasmid pl395, complete sequence	119722-119753	10	0.688
CP033348_3	3.29\|963319\|32\|CP033348\|CRISPRCasFinder,CRT	963319-963350	32	NZ_CP020744	Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence	232616-232647	10	0.688
CP033348_3	3.29\|963319\|32\|CP033348\|CRISPRCasFinder,CRT	963319-963350	32	NC_018688	Bacillus thuringiensis MC28 plasmid pMC319, complete sequence	147891-147922	10	0.688
CP033348_3	3.29\|963319\|32\|CP033348\|CRISPRCasFinder,CRT	963319-963350	32	NZ_CP009691	Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence	163526-163557	10	0.688
CP033348_3	3.29\|963319\|32\|CP033348\|CRISPRCasFinder,CRT	963319-963350	32	CP037991	Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence	422132-422163	10	0.688
CP033348_3	3.36\|963747\|32\|CP033348\|CRISPRCasFinder,CRT	963747-963778	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1151729-1151760	10	0.688
CP033348_3	3.36\|963747\|32\|CP033348\|CRISPRCasFinder,CRT	963747-963778	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	661429-661460	10	0.688
CP033348_3	3.8\|963134\|34\|CP033348\|PILER-CR	963134-963167	34	NZ_CP022925	Klebsiella pneumoniae strain ST307PT01 plasmid pJYC01B	24619-24652	11	0.676

1. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to MK448230 (Klebsiella phage ST16-OXA48phi5.2, complete genome) position: , mismatch: 4, identity: 0.875

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctctggaagagctacaggaacgccgcaaggcc	Protospacer
 **..* *************************

2. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to MK448233 (Klebsiella phage ST11-VIM1phi8.1, complete genome) position: , mismatch: 4, identity: 0.875

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctctggaagagctacaggaacgccgcaaggcc	Protospacer
 **..* *************************

3. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to MK448235 (Klebsiella phage ST512-KPC3phi13.1, complete genome) position: , mismatch: 4, identity: 0.875

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctctggaagagctacaggaacgccgcaaggcc	Protospacer
 **..* *************************

4. spacer 3.8|963134|34|CP033348|PILER-CR matches to MK448230 (Klebsiella phage ST16-OXA48phi5.2, complete genome) position: , mismatch: 5, identity: 0.853

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
tgctctggaagagctacaggaacgccgcaaggcc	Protospacer
.* **..* *************************

5. spacer 3.8|963134|34|CP033348|PILER-CR matches to MK448233 (Klebsiella phage ST11-VIM1phi8.1, complete genome) position: , mismatch: 5, identity: 0.853

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
tgctctggaagagctacaggaacgccgcaaggcc	Protospacer
.* **..* *************************

6. spacer 3.8|963134|34|CP033348|PILER-CR matches to MK448235 (Klebsiella phage ST512-KPC3phi13.1, complete genome) position: , mismatch: 5, identity: 0.853

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
tgctctggaagagctacaggaacgccgcaaggcc	Protospacer
.* **..* *************************

7. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_KP763470 (Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence) position: , mismatch: 5, identity: 0.853

cgat-ccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
-gatggcagcagagctacaggagcgtcgcaaggct	Protospacer
 ***  ****************.**.********.

8. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to MN543575 (Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_fusion, complete sequence) position: , mismatch: 5, identity: 0.844

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
aacgggcagagccacaggaacgccgcaaagcc	Protospacer
* * .*******.***************.***

9. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to MN543576 (Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_vir, complete sequence) position: , mismatch: 5, identity: 0.844

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
aacgggcagagccacaggaacgccgcaaagcc	Protospacer
* * .*******.***************.***

10. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP048109 (Klebsiella michiganensis strain BD177 plasmid unnamed1) position: , mismatch: 5, identity: 0.844

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
aacgggcagagccacaggaacgccgcaaagcc	Protospacer
* * .*******.***************.***

11. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP024517 (Klebsiella pneumoniae strain KSB1_10J plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
aacgggcagagccacaggaacgccgcaaagcc	Protospacer
* * .*******.***************.***

12. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP024497 (Klebsiella pneumoniae strain KSB1_7E plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.844

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
aacgggcagagccacaggaacgccgcaaagcc	Protospacer
* * .*******.***************.***

13. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP024501 (Klebsiella pneumoniae strain KSB1_4E plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
aacgggcagagccacaggaacgccgcaaagcc	Protospacer
* * .*******.***************.***

14. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP032356 (Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_Vir, complete sequence) position: , mismatch: 5, identity: 0.844

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
aacgggcagagccacaggaacgccgcaaagcc	Protospacer
* * .*******.***************.***

15. spacer 2.17|952603|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP032827 (Sphingomonas sp. YZ-8 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

tacctgacgctgatccagtcgatcgcgctgct	CRISPR spacer
ctgctgacgctgatccagtcgatcgccatgca	Protospacer
.  ***********************  ***

16. spacer 3.8|963134|34|CP033348|PILER-CR matches to MN543575 (Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_fusion, complete sequence) position: , mismatch: 6, identity: 0.824

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
agaacgggcagagccacaggaacgccgcaaagcc	Protospacer
 ** * .*******.***************.***

17. spacer 3.8|963134|34|CP033348|PILER-CR matches to MN543576 (Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_vir, complete sequence) position: , mismatch: 6, identity: 0.824

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
agaacgggcagagccacaggaacgccgcaaagcc	Protospacer
 ** * .*******.***************.***

18. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP048109 (Klebsiella michiganensis strain BD177 plasmid unnamed1) position: , mismatch: 6, identity: 0.824

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
agaacgggcagagccacaggaacgccgcaaagcc	Protospacer
 ** * .*******.***************.***

19. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP024517 (Klebsiella pneumoniae strain KSB1_10J plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.824

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
agaacgggcagagccacaggaacgccgcaaagcc	Protospacer
 ** * .*******.***************.***

20. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP024497 (Klebsiella pneumoniae strain KSB1_7E plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
agaacgggcagagccacaggaacgccgcaaagcc	Protospacer
 ** * .*******.***************.***

21. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP024501 (Klebsiella pneumoniae strain KSB1_4E plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.824

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
agaacgggcagagccacaggaacgccgcaaagcc	Protospacer
 ** * .*******.***************.***

22. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP032356 (Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_Vir, complete sequence) position: , mismatch: 6, identity: 0.824

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
agaacgggcagagccacaggaacgccgcaaagcc	Protospacer
 ** * .*******.***************.***

23. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_KP763470 (Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
tggcagcagagctacaggagcgtcgcaaggct	Protospacer
   ****************.**.********.

24. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP048109 (Klebsiella michiganensis strain BD177 plasmid unnamed1) position: , mismatch: 6, identity: 0.812

atccagca-gagctacaggaacgccgcaaggcc	CRISPR spacer
-ccctgcgcgaactccaggaacgccgcaaggcc	Protospacer
 .** **. **.** ******************

25. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP024517 (Klebsiella pneumoniae strain KSB1_10J plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

atccagca-gagctacaggaacgccgcaaggcc	CRISPR spacer
-ccctgcgcgaactccaggaacgccgcaaggcc	Protospacer
 .** **. **.** ******************

26. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP024497 (Klebsiella pneumoniae strain KSB1_7E plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

atccagca-gagctacaggaacgccgcaaggcc	CRISPR spacer
-ccctgcgcgaactccaggaacgccgcaaggcc	Protospacer
 .** **. **.** ******************

27. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP024501 (Klebsiella pneumoniae strain KSB1_4E plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

atccagca-gagctacaggaacgccgcaaggcc	CRISPR spacer
-ccctgcgcgaactccaggaacgccgcaaggcc	Protospacer
 .** **. **.** ******************

28. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to MK972697 (Salmonella phage SF10, complete genome) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
agatagacgagctacaggaacgccgcaaggct	Protospacer
*  .**  ***********************.

29. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to MK972696 (Salmonella phage Si3 KFo-2019, complete genome) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
agatagacgagctacaggaacgccgcaaggct	Protospacer
*  .**  ***********************.

30. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to MK972695 (Salmonella phage SI5, complete genome) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
agatagacgagctacaggaacgccgcaaggct	Protospacer
*  .**  ***********************.

31. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to MK972688 (Salmonella phage SI8, complete genome) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
agatagacgagctacaggaacgccgcaaggct	Protospacer
*  .**  ***********************.

32. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to MK972689 (Salmonella phage SF6, complete genome) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
agatagacgagctacaggaacgccgcaaggct	Protospacer
*  .**  ***********************.

33. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_KY270853 (Raoultella ornithinolytica strain YNKP001 plasmid pYNKP001-dfrA, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

34. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to MN175386 (Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggca	Protospacer
 **..************ ****.********

35. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_KX839207 (Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

36. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP021328 (Raoultella ornithinolytica strain Ro24724 plasmid pRo24724, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

37. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP025467 (Klebsiella pneumoniae strain JS187 plasmid p187-1, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

38. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP019048 (Klebsiella pneumoniae subsp. pneumoniae strain RJA166 plasmid pRJA166a, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

39. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NC_018107 (Klebsiella michiganensis E718 plasmid pKOX_R1, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

40. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP022441 (Klebsiella sp. LY plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

41. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to KU318421 (Klebsiella pneumoniae strain KP04 plasmid pKP04VIM, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

42. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NC_023911 (Raoultella planticola strain KpNDM1 plasmid pKpNDM1, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

43. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP025964 (Klebsiella pneumoniae strain WCHKP34 plasmid pIMP4_LL34, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

44. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP038277 (Raoultella ornithinolytica strain WLK218 plasmid pWLK-238550, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

45. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP024641 (Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

46. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP046614 (Klebsiella pneumoniae strain WCGKP294 plasmid pWCGKP294-2, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

47. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP026014 (Klebsiella variicola strain 13450 plasmid p13450-1, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

48. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP026019 (Klebsiella pneumoniae strain 13190 plasmid p13190-1, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

49. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_MF344561 (Klebsiella pneumoniae strain 11219 plasmid p11219-IMP, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

50. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_MF344566 (Klebsiella pneumoniae strain A324 plasmid pA324-IMP, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

51. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_MF344565 (Klebsiella pneumoniae strain 19051 plasmid p19051-IMP, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

52. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_MF344562 (Klebsiella pneumoniae strain 12208 plasmid p12208-IMP, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

53. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_MF344567 (Klebsiella pneumoniae strain A708 plasmid pA708-IMP, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

54. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_MF344563 (Klebsiella pneumoniae strain 13190 plasmid p13190-VIM, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

55. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_MF344564 (Klebsiella pneumoniae strain 13450 plasmid p13450-IMP, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

56. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP026369 (Klebsiella quasipneumoniae strain A708 plasmid pA708-1, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

57. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to MN661402 (Klebsiella quasipneumoniae strain KP18-31 plasmid pKP18-31-IMP,KPC, complete sequence) position: , mismatch: 6, identity: 0.812

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ttctggcagagctacagcaacgtcgcaaggct	Protospacer
 **..************ ****.********.

58. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to MT682064 (Klebsiella virus KpV2811, complete genome) position: , mismatch: 6, identity: 0.812

atccagca-gagctacaggaacgccgcaaggcc	CRISPR spacer
-ccctgcgtgaactacaggaacgacgcaaggcc	Protospacer
 .** **. **.*********** *********

59. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to MK422450 (Klebsiella phage ST13-OXA48phi12.4, complete genome) position: , mismatch: 6, identity: 0.812

atccagca-gagctacaggaacgccgcaaggcc	CRISPR spacer
-ccctgcgcgaactccaggaacgccgcaaggcc	Protospacer
 .** **. **.** ******************

60. spacer 2.4|952602|33|CP033348|PILER-CR matches to NZ_CP032827 (Sphingomonas sp. YZ-8 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.788

gtacctgacgctgatccagtcgatcgcgctgct	CRISPR spacer
cctgctgacgctgatccagtcgatcgccatgca	Protospacer
 .  ***********************  ***

61. spacer 2.17|952603|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP015420 (Rhodovulum sulfidophilum DSM 1374 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

tacctga--cgctgatccagtcgatcgcgctgct	CRISPR spacer
--gcggatgcgctgatccagtcgatcgagctggc	Protospacer
   * **  ****************** **** .

62. spacer 2.27|953213|32|CP033348|CRISPRCasFinder,CRT matches to MF495478 (Aeromonas salmonicida plasmid pS121-1b, complete sequence) position: , mismatch: 7, identity: 0.781

ggcgtggtgtatatcggtcttgatgcgttgtc	CRISPR spacer
gcagtggtctatatcggtctggatgccatgac	Protospacer
*  ***** *********** *****  ** *

63. spacer 2.27|953213|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP038450 (Aeromonas media strain R50-22 plasmid pAeme6, complete sequence) position: , mismatch: 7, identity: 0.781

ggcgtggtgtatatcggtcttgatgcgttgtc	CRISPR spacer
gcagtggtctatatcggtctggatgccatgac	Protospacer
*  ***** *********** *****  ** *

64. spacer 2.27|953213|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP022170 (Aeromonas salmonicida strain S121 plasmid pS121-1a, complete sequence) position: , mismatch: 7, identity: 0.781

ggcgtggtgtatatcggtcttgatgcgttgtc	CRISPR spacer
gcagtggtctatatcggtctggatgccatgac	Protospacer
*  ***** *********** *****  ** *

65. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP048109 (Klebsiella michiganensis strain BD177 plasmid unnamed1) position: , mismatch: 7, identity: 0.794

cgatccagca-gagctacaggaacgccgcaaggcc	CRISPR spacer
-ggccctgcgcgaactccaggaacgccgcaaggcc	Protospacer
 *..** **. **.** ******************

66. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP024517 (Klebsiella pneumoniae strain KSB1_10J plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagca-gagctacaggaacgccgcaaggcc	CRISPR spacer
-ggccctgcgcgaactccaggaacgccgcaaggcc	Protospacer
 *..** **. **.** ******************

67. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP024497 (Klebsiella pneumoniae strain KSB1_7E plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagca-gagctacaggaacgccgcaaggcc	CRISPR spacer
-ggccctgcgcgaactccaggaacgccgcaaggcc	Protospacer
 *..** **. **.** ******************

68. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP024501 (Klebsiella pneumoniae strain KSB1_4E plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagca-gagctacaggaacgccgcaaggcc	CRISPR spacer
-ggccctgcgcgaactccaggaacgccgcaaggcc	Protospacer
 *..** **. **.** ******************

69. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_KY270853 (Raoultella ornithinolytica strain YNKP001 plasmid pYNKP001-dfrA, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

70. spacer 3.8|963134|34|CP033348|PILER-CR matches to MN175386 (Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggca	Protospacer
*  **..************ ****.********

71. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_KX839207 (Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

72. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP021328 (Raoultella ornithinolytica strain Ro24724 plasmid pRo24724, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

73. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP025467 (Klebsiella pneumoniae strain JS187 plasmid p187-1, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

74. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP019048 (Klebsiella pneumoniae subsp. pneumoniae strain RJA166 plasmid pRJA166a, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

75. spacer 3.8|963134|34|CP033348|PILER-CR matches to NC_018107 (Klebsiella michiganensis E718 plasmid pKOX_R1, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

76. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP022441 (Klebsiella sp. LY plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

77. spacer 3.8|963134|34|CP033348|PILER-CR matches to KU318421 (Klebsiella pneumoniae strain KP04 plasmid pKP04VIM, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

78. spacer 3.8|963134|34|CP033348|PILER-CR matches to NC_023911 (Raoultella planticola strain KpNDM1 plasmid pKpNDM1, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

79. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP025964 (Klebsiella pneumoniae strain WCHKP34 plasmid pIMP4_LL34, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

80. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP038277 (Raoultella ornithinolytica strain WLK218 plasmid pWLK-238550, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

81. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP024641 (Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

82. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP046614 (Klebsiella pneumoniae strain WCGKP294 plasmid pWCGKP294-2, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

83. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP026014 (Klebsiella variicola strain 13450 plasmid p13450-1, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

84. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP026019 (Klebsiella pneumoniae strain 13190 plasmid p13190-1, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

85. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_MF344561 (Klebsiella pneumoniae strain 11219 plasmid p11219-IMP, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

86. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_MF344566 (Klebsiella pneumoniae strain A324 plasmid pA324-IMP, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

87. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_MF344565 (Klebsiella pneumoniae strain 19051 plasmid p19051-IMP, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

88. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_MF344562 (Klebsiella pneumoniae strain 12208 plasmid p12208-IMP, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

89. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_MF344567 (Klebsiella pneumoniae strain A708 plasmid pA708-IMP, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

90. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_MF344563 (Klebsiella pneumoniae strain 13190 plasmid p13190-VIM, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

91. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_MF344564 (Klebsiella pneumoniae strain 13450 plasmid p13450-IMP, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

92. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP026369 (Klebsiella quasipneumoniae strain A708 plasmid pA708-1, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

93. spacer 3.8|963134|34|CP033348|PILER-CR matches to MN661402 (Klebsiella quasipneumoniae strain KP18-31 plasmid pKP18-31-IMP,KPC, complete sequence) position: , mismatch: 7, identity: 0.794

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctttctggcagagctacagcaacgtcgcaaggct	Protospacer
*  **..************ ****.********.

94. spacer 3.8|963134|34|CP033348|PILER-CR matches to MT682064 (Klebsiella virus KpV2811, complete genome) position: , mismatch: 7, identity: 0.794

cgatccagca-gagctacaggaacgccgcaaggcc	CRISPR spacer
-ggccctgcgtgaactacaggaacgacgcaaggcc	Protospacer
 *..** **. **.*********** *********

95. spacer 3.8|963134|34|CP033348|PILER-CR matches to MK422450 (Klebsiella phage ST13-OXA48phi12.4, complete genome) position: , mismatch: 7, identity: 0.794

cgatccagca-gagctacaggaacgccgcaaggcc	CRISPR spacer
-ggccctgcgcgaactccaggaacgccgcaaggcc	Protospacer
 *..** **. **.** ******************

96. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP027613 (Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
cgttgcgagagctacaggaacgccgcaaggcc	Protospacer
  ...  *************************

97. spacer 3.29|963319|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 7, identity: 0.781

ccgggatccgtcatcggtcgtggttcactgca	CRISPR spacer
ccggtatccgtcatcggtcttggcgtgcagca	Protospacer
**** ************** ***. ..* ***

98. spacer 3.33|963564|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP042496 (Leclercia adecarboxylata strain E61 plasmid pE61_003, complete sequence) position: , mismatch: 7, identity: 0.781

ccggagcctgaccaggatttttc--cgccgtgta	CRISPR spacer
ccggagcctgaccggggtttttcgtggtcctg--	Protospacer
*************.**.******   *.* **

99. spacer 3.33|963564|32|CP033348|CRISPRCasFinder,CRT matches to NZ_MH909330 (Leclercia adecarboxylata strain 150707804 plasmid p707804-1FII, complete sequence) position: , mismatch: 7, identity: 0.781

ccggagcctgaccaggatttttc--cgccgtgta	CRISPR spacer
ccggagcctgagcgggatttttcgtggtcctg--	Protospacer
*********** *.*********   *.* **

100. spacer 2.3|952541|33|CP033348|PILER-CR matches to NZ_CP049031 (Fluviibacterium aquatile strain SC52 plasmid pSC52_3, complete sequence) position: , mismatch: 8, identity: 0.758

----gcttccagttttttccctgccttttgggcggcg	CRISPR spacer
tgccgctc----tttgttccctgccttttggtcggca	Protospacer
    ***.    *** *************** ****.

101. spacer 2.4|952602|33|CP033348|PILER-CR matches to MT701587 (Burkholderia phage Magia, complete genome) position: , mismatch: 8, identity: 0.758

gtacctgacgctgatccagtcgatcgcgctgct	CRISPR spacer
gcaagtgacgctgatcaagtcgatcccgctcga	Protospacer
*.*  *********** ******** ****

102. spacer 2.6|952724|33|CP033348|PILER-CR matches to NC_015258 (Polymorphum gilvum SL003B-26A1 plasmid pSL003B, complete sequence) position: , mismatch: 8, identity: 0.758

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggaggcgaggtcgttcgcgacgtcctcgttg	Protospacer
*  *   ***********.************

103. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_AP022566 (Mycolicibacterium alvei strain JCM 12272 plasmid pJCM12272, complete sequence) position: , mismatch: 8, identity: 0.758

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
acgacgccgacgtcgtgcacgacgtcctcgagg	Protospacer
*. .* **** ***** ************* *

104. spacer 2.6|952724|33|CP033348|PILER-CR matches to NC_011990 (Agrobacterium radiobacter K84 plasmid pAtK84b, complete sequence) position: , mismatch: 8, identity: 0.758

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
*  **  ***********.****** *****

105. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_CP030831 (Neorhizobium sp. NCHU2750 plasmid pTiNCHU2750, complete sequence) position: , mismatch: 8, identity: 0.758

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
*  **  ***********.****** *****

106. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_MK439382 (Agrobacterium tumefaciens strain CFBP2178 plasmid pTiCFBP2178, complete sequence) position: , mismatch: 8, identity: 0.758

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
*  **  ***********.****** *****

107. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_MK439383 (Agrobacterium tumefaciens strain CFBP1935 plasmid pTiCFBP1935, complete sequence) position: , mismatch: 8, identity: 0.758

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
*  **  ***********.****** *****

108. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_MK318986 (Agrobacterium rhizogenes strain C6.5 plasmid pTiC6.5, complete sequence) position: , mismatch: 8, identity: 0.758

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
*  **  ***********.****** *****

109. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_MK439384 (Agrobacterium tumefaciens strain Kerr108 plasmid pTiKerr108, complete sequence) position: , mismatch: 8, identity: 0.758

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
*  **  ***********.****** *****

110. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_MK439381 (Agrobacterium tumefaciens strain Sule1 plasmid pTiSule1, complete sequence) position: , mismatch: 8, identity: 0.758

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
*  **  ***********.****** *****

111. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_MF511177 (Agrobacterium rhizogenes strain C5.7 plasmid pTiC5.7, complete sequence) position: , mismatch: 8, identity: 0.758

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
*  **  ***********.****** *****

112. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_KY000066 (Agrobacterium deltaense strain CFBP7129 plasmid pTi_CFBP7129, complete sequence) position: , mismatch: 8, identity: 0.758

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggcggcgaggtcgtgcgcgacgtcctcgtcg	Protospacer
*  **  ********* *.************

113. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_KY000052 (Agrobacterium tumefaciens strain CFBP7000 plasmid pTi_CFBP7000, complete sequence) position: , mismatch: 8, identity: 0.758

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
*  **  ***********.****** *****

114. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_KY000049 (Agrobacterium rhizogenes strain CFBP4423 plasmid pTi_CFBP4423, complete sequence) position: , mismatch: 8, identity: 0.758

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
*  **  ***********.****** *****

115. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_KY000055 (Agrobacterium rubi strain Tun159 plasmid pTi_Tun159, complete sequence) position: , mismatch: 8, identity: 0.758

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
*  **  ***********.****** *****

116. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_KY000043 (Agrobacterium rhizogenes strain CFBP1905 plasmid pTi_CFBP1905, complete sequence) position: , mismatch: 8, identity: 0.758

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
*  **  ***********.****** *****

117. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_KY000048 (Agrobacterium rhizogenes strain CFBP2746 plasmid pTi_CFBP2746, complete sequence) position: , mismatch: 8, identity: 0.758

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
*  **  ***********.****** *****

118. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_KY000053 (Agrobacterium genomosp. 1 strain DC12-001 plasmid pTi_DC12-001, complete sequence) position: , mismatch: 8, identity: 0.758

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
*  **  ***********.****** *****

119. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_KY000054 (Agrobacterium tumefaciens strain Tun154 plasmid pTi_Tun154, complete sequence) position: , mismatch: 8, identity: 0.758

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
*  **  ***********.****** *****

120. spacer 2.17|952603|32|CP033348|CRISPRCasFinder,CRT matches to MT701587 (Burkholderia phage Magia, complete genome) position: , mismatch: 8, identity: 0.75

tacctgacgctgatccagtcgatcgcgctgct	CRISPR spacer
caagtgacgctgatcaagtcgatcccgctcga	Protospacer
.*  *********** ******** ****

121. spacer 2.18|952664|32|CP033348|CRISPRCasFinder,CRT matches to NC_013502 (Rhodothermus marinus DSM 4252 plasmid pRMAR01, complete sequence) position: , mismatch: 8, identity: 0.75

attttctttgcgcccgtactcaacgtgggagg-	CRISPR spacer
attttcattgcgcccggactcaat-cgacagct	Protospacer
****** ********* ******. .*. **

122. spacer 2.18|952664|32|CP033348|CRISPRCasFinder,CRT matches to NC_015970 (Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201, complete sequence) position: , mismatch: 8, identity: 0.75

attttctttgcgcccgtactcaacgtgggagg-	CRISPR spacer
attttcattgcgcccggactcaat-cgacagct	Protospacer
****** ********* ******. .*. **

123. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NC_015258 (Polymorphum gilvum SL003B-26A1 plasmid pSL003B, complete sequence) position: , mismatch: 8, identity: 0.75

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggaggcgaggtcgttcgcgacgtcctcgttg	Protospacer
  *   ***********.************

124. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_AP022566 (Mycolicibacterium alvei strain JCM 12272 plasmid pJCM12272, complete sequence) position: , mismatch: 8, identity: 0.75

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
cgacgccgacgtcgtgcacgacgtcctcgagg	Protospacer
. .* **** ***** ************* *

125. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NC_011990 (Agrobacterium radiobacter K84 plasmid pAtK84b, complete sequence) position: , mismatch: 8, identity: 0.75

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
  **  ***********.****** *****

126. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP030831 (Neorhizobium sp. NCHU2750 plasmid pTiNCHU2750, complete sequence) position: , mismatch: 8, identity: 0.75

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
  **  ***********.****** *****

127. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_MK439382 (Agrobacterium tumefaciens strain CFBP2178 plasmid pTiCFBP2178, complete sequence) position: , mismatch: 8, identity: 0.75

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
  **  ***********.****** *****

128. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_MK439383 (Agrobacterium tumefaciens strain CFBP1935 plasmid pTiCFBP1935, complete sequence) position: , mismatch: 8, identity: 0.75

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
  **  ***********.****** *****

129. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_MK318986 (Agrobacterium rhizogenes strain C6.5 plasmid pTiC6.5, complete sequence) position: , mismatch: 8, identity: 0.75

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
  **  ***********.****** *****

130. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_MK439384 (Agrobacterium tumefaciens strain Kerr108 plasmid pTiKerr108, complete sequence) position: , mismatch: 8, identity: 0.75

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
  **  ***********.****** *****

131. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_MK439381 (Agrobacterium tumefaciens strain Sule1 plasmid pTiSule1, complete sequence) position: , mismatch: 8, identity: 0.75

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
  **  ***********.****** *****

132. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_MF511177 (Agrobacterium rhizogenes strain C5.7 plasmid pTiC5.7, complete sequence) position: , mismatch: 8, identity: 0.75

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
  **  ***********.****** *****

133. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_KY000066 (Agrobacterium deltaense strain CFBP7129 plasmid pTi_CFBP7129, complete sequence) position: , mismatch: 8, identity: 0.75

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggcggcgaggtcgtgcgcgacgtcctcgtcg	Protospacer
  **  ********* *.************

134. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_KY000052 (Agrobacterium tumefaciens strain CFBP7000 plasmid pTi_CFBP7000, complete sequence) position: , mismatch: 8, identity: 0.75

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
  **  ***********.****** *****

135. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_KY000049 (Agrobacterium rhizogenes strain CFBP4423 plasmid pTi_CFBP4423, complete sequence) position: , mismatch: 8, identity: 0.75

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
  **  ***********.****** *****

136. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_KY000055 (Agrobacterium rubi strain Tun159 plasmid pTi_Tun159, complete sequence) position: , mismatch: 8, identity: 0.75

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
  **  ***********.****** *****

137. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_KY000043 (Agrobacterium rhizogenes strain CFBP1905 plasmid pTi_CFBP1905, complete sequence) position: , mismatch: 8, identity: 0.75

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
  **  ***********.****** *****

138. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_KY000048 (Agrobacterium rhizogenes strain CFBP2746 plasmid pTi_CFBP2746, complete sequence) position: , mismatch: 8, identity: 0.75

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
  **  ***********.****** *****

139. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_KY000053 (Agrobacterium genomosp. 1 strain DC12-001 plasmid pTi_DC12-001, complete sequence) position: , mismatch: 8, identity: 0.75

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
  **  ***********.****** *****

140. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_KY000054 (Agrobacterium tumefaciens strain Tun154 plasmid pTi_Tun154, complete sequence) position: , mismatch: 8, identity: 0.75

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggcggcgaggtcgttcgcgacgtactcgtcg	Protospacer
  **  ***********.****** *****

141. spacer 2.27|953213|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP048109 (Klebsiella michiganensis strain BD177 plasmid unnamed1) position: , mismatch: 8, identity: 0.75

ggcgtggtgtatatcggtcttgatgcgttgtc	CRISPR spacer
gccgtggtgtatatcggcctcgatgcactcag	Protospacer
* ***************.**.*****..*

142. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP027613 (Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
tgcgttgcgagagctacaggaacgccgcaaggcc	Protospacer
.*  ...  *************************

143. spacer 3.11|963317|34|CP033348|PILER-CR matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 8, identity: 0.765

cgccgggatccgtcatcggtcgtggttcactgca	CRISPR spacer
agccggtatccgtcatcggtcttggcgtgcagca	Protospacer
 ***** ************** ***. ..* ***

144. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ccctgtgtgagctacaggaacgccgcaaggct	Protospacer
 .*..   ***********************.

145. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to CP053324 (Salmonella enterica subsp. salamae serovar 40:c:e,n,z15 strain 2013K-0524 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ccctgtgtgagctacaggaacgccgcaaggct	Protospacer
 .*..   ***********************.

146. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NC_006949 (Enterobacteria phage ES18, complete genome) position: , mismatch: 8, identity: 0.75

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ccctgtgtgagctacaggaacgccgcaaggct	Protospacer
 .*..   ***********************.

147. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 8, identity: 0.75

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ccctgtgtgagctacaggaacgccgcaaggct	Protospacer
 .*..   ***********************.

148. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to AY736146 (Salmonella typhimurium bacteriophage ES18, complete sequence) position: , mismatch: 8, identity: 0.75

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ccctgtgtgagctacaggaacgccgcaaggct	Protospacer
 .*..   ***********************.

149. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NC_047875 (Salmonella phage UPF_BP1, complete genome) position: , mismatch: 8, identity: 0.75

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ccctgtgtgagctacaggaacgccgcaaggct	Protospacer
 .*..   ***********************.

150. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to MN175386 (Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence) position: , mismatch: 8, identity: 0.75

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
cgctgcgagagctacaggaacgtcgcatggcc	Protospacer
  *..  ***************.**** ****

151. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NC_004813 (Enterobacteria phage BP-4795, complete genome) position: , mismatch: 8, identity: 0.75

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctctgcgcgagctacaggagcgccgcaaggct	Protospacer
 **..   ***********.***********.

152. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to AJ556162 (Phage BP-4795 complete genome) position: , mismatch: 8, identity: 0.75

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ctctgcgcgagctacaggagcgccgcaaggct	Protospacer
 **..   ***********.***********.

153. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP010632 (Phaeobacter inhibens strain P78 plasmid pP78_c, complete sequence) position: , mismatch: 8, identity: 0.75

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
cgccagcagagctacagcgacgccgctataca	Protospacer
  *************** .******* * .*

154. spacer 3.27|963197|32|CP033348|CRISPRCasFinder,CRT matches to MN871446 (UNVERIFIED: Serratia phage KpLz-2_45, complete genome) position: , mismatch: 8, identity: 0.75

---ttgatccgggcatttgaatattgggctaaaga	CRISPR spacer
gaacgtatc---gcatttgactattgggcgaaaga	Protospacer
   .  ***   ******** ******** *****

155. spacer 3.32|963503|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP044979 (Bacillus thuringiensis strain BT62 plasmid pBT62A, complete sequence) position: , mismatch: 8, identity: 0.75

tccctgctggccgttctggaattgcgtagcgc	CRISPR spacer
ttgcatatggccgttcaggcattgcgtagcgg	Protospacer
*. *   ********* ** ***********

156. spacer 3.32|963503|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP044979 (Bacillus thuringiensis strain BT62 plasmid pBT62A, complete sequence) position: , mismatch: 8, identity: 0.75

tccctgctggccgttctggaattgcgtagcgc	CRISPR spacer
ttgcatatggccgttcaggcattgcgtagcgg	Protospacer
*. *   ********* ** ***********

157. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_CP026928 (Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence) position: , mismatch: 9, identity: 0.727

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
aaggtggcgagatcgttcgcgacgtcctcgtcg	Protospacer
*  *.  ****.******.************

158. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_LR723673 (Rhizobium flavum strain YW14 plasmid 4) position: , mismatch: 9, identity: 0.727

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggtggcgaggtcgttcgcgacgtgctcgtcg	Protospacer
*  *.  ***********.****** *****

159. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_CP015748 (Shinella sp. HZN7 plasmid pShin-12, complete sequence) position: , mismatch: 9, identity: 0.727

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggaggcgaggtcgttcgcgacgtactcgttg	Protospacer
*  *   ***********.****** *****

160. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_CP025505 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvC, complete sequence) position: , mismatch: 9, identity: 0.727

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggtggcgagatcgttcgcgacgtcctcgtcg	Protospacer
*  *.  ****.******.************

161. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_CP022669 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR4, complete sequence) position: , mismatch: 9, identity: 0.727

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggtggcgagatcgttcgcgacgtcctcgtcg	Protospacer
*  *.  ****.******.************

162. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_CP022669 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR4, complete sequence) position: , mismatch: 9, identity: 0.727

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggtggcgagatcgttcgcgacgtcctcgtcg	Protospacer
*  *.  ****.******.************

163. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_CP050089 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence) position: , mismatch: 9, identity: 0.727

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
agggtggcgagatcgttcgcgacgtcctcgtcg	Protospacer
*  *.  ****.******.************

164. spacer 2.16|952542|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP049031 (Fluviibacterium aquatile strain SC52 plasmid pSC52_3, complete sequence) position: , mismatch: 9, identity: 0.719

cttccagttttttccctgccttttgggcggcg	CRISPR spacer
gccgctctttgttccctgccttttggtcggca	Protospacer
 .. *  *** *************** ****.

165. spacer 2.17|952603|32|CP033348|CRISPRCasFinder,CRT matches to NZ_AP014801 (Rhodovulum sulfidophilum plasmid Plasmid1 DNA, complete genome, strain: DSM 2351) position: , mismatch: 9, identity: 0.719

tacctgacgctgatccagtcgatcgcgctgct	CRISPR spacer
gccgatgcgctgatccagtcgatcgagctggc	Protospacer
  *   .****************** **** .

166. spacer 2.17|952603|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP020385 (Rhodovulum sp. MB263 plasmid pRSMBA, complete sequence) position: , mismatch: 9, identity: 0.719

tacctgacgctgatccagtcgatcgcgctgct	CRISPR spacer
gccgacgcgctgatccagtcgatcgagctggc	Protospacer
  *   .****************** **** .

167. spacer 2.17|952603|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP020040 (Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence) position: , mismatch: 9, identity: 0.719

tacctgacgctgatccagtcgatcgcgctgct	CRISPR spacer
aagaacaagctgatccagtcgaccgcgccgcc	Protospacer
 *    * **************.*****.**.

168. spacer 2.17|952603|32|CP033348|CRISPRCasFinder,CRT matches to NZ_AP022334 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49b, complete sequence) position: , mismatch: 9, identity: 0.719

tacctgacgctgatccagtcgatcgcgctgct	CRISPR spacer
actcacacgctgatcgaggcgatcgcgctcgt	Protospacer
  .*  ********* ** **********  *

169. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP026928 (Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence) position: , mismatch: 9, identity: 0.719

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
aggtggcgagatcgttcgcgacgtcctcgtcg	Protospacer
  *.  ****.******.************

170. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_LR723673 (Rhizobium flavum strain YW14 plasmid 4) position: , mismatch: 9, identity: 0.719

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggtggcgaggtcgttcgcgacgtgctcgtcg	Protospacer
  *.  ***********.****** *****

171. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP015748 (Shinella sp. HZN7 plasmid pShin-12, complete sequence) position: , mismatch: 9, identity: 0.719

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggaggcgaggtcgttcgcgacgtactcgttg	Protospacer
  *   ***********.****** *****

172. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP025505 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvC, complete sequence) position: , mismatch: 9, identity: 0.719

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggtggcgagatcgttcgcgacgtcctcgtcg	Protospacer
  *.  ****.******.************

173. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP022669 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR4, complete sequence) position: , mismatch: 9, identity: 0.719

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggtggcgagatcgttcgcgacgtcctcgtcg	Protospacer
  *.  ****.******.************

174. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP022669 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR4, complete sequence) position: , mismatch: 9, identity: 0.719

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggtggcgagatcgttcgcgacgtcctcgtcg	Protospacer
  *.  ****.******.************

175. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP010864 (Marinovum algicola DG 898 plasmid pMaD9, complete sequence) position: , mismatch: 9, identity: 0.719

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
cgataccgaggtcgttcaggatgtcctcgcgg	Protospacer
. .. ************* **.*******.*

176. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP050089 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence) position: , mismatch: 9, identity: 0.719

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gggtggcgagatcgttcgcgacgtcctcgtcg	Protospacer
  *.  ****.******.************

177. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NC_010373 (Methylobacterium sp. 4-46 plasmid pM44601, complete sequence) position: , mismatch: 9, identity: 0.719

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
cgtccttgaggtcgttcacgacctcgtcgtcg	Protospacer
.  **..*************** ** ****

178. spacer 3.8|963134|34|CP033348|PILER-CR matches to MN175386 (Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence) position: , mismatch: 9, identity: 0.735

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ggcgctgcgagagctacaggaacgtcgcatggcc	Protospacer
 *  *..  ***************.**** ****

179. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to MN543575 (Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_fusion, complete sequence) position: , mismatch: 9, identity: 0.719

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ccttggtggagctacaggaacgccgcaatgct	Protospacer
 ....*..******************** **.

180. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to MN543576 (Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_vir, complete sequence) position: , mismatch: 9, identity: 0.719

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ccttggtggagctacaggaacgccgcaatgct	Protospacer
 ....*..******************** **.

181. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP032356 (Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_Vir, complete sequence) position: , mismatch: 9, identity: 0.719

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
ccttggtggagctacaggaacgccgcaatgct	Protospacer
 ....*..******************** **.

182. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP021432 (Yoonia vestfoldensis strain SMR4r plasmid pSMR4r-1, complete sequence) position: , mismatch: 9, identity: 0.719

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
cggcagcagagctacagcgacgccgcgatcca	Protospacer
   ************** .*******.*  *

183. spacer 3.29|963319|32|CP033348|CRISPRCasFinder,CRT matches to AY986977 (Xanthomonas campestris pv. pelargonii phage Xp15, complete genome) position: , mismatch: 9, identity: 0.719

ccgggatccgtcatcggtcgtggttcactgca	CRISPR spacer
ttgcgatccatcatcggtcgaggttcaaacga	Protospacer
..* *****.********** ******    *

184. spacer 3.29|963319|32|CP033348|CRISPRCasFinder,CRT matches to NC_007024 (Xanthomonas phage Xp15, complete genome) position: , mismatch: 9, identity: 0.719

ccgggatccgtcatcggtcgtggttcactgca	CRISPR spacer
ttgcgatccatcatcggtcgaggttcaaacga	Protospacer
..* *****.********** ******    *

185. spacer 3.34|963625|32|CP033348|CRISPRCasFinder,CRT matches to LT960552 (Yersinia phage fHe-Yen9-03 genome assembly, complete genome: monopartite) position: , mismatch: 9, identity: 0.719

gaattgcaggagtggtttatcgagtgtttaca	CRISPR spacer
cagtaaaaggagtggtttatcaaatgtttatg	Protospacer
 *.* . **************.*.******..

186. spacer 3.34|963625|32|CP033348|CRISPRCasFinder,CRT matches to LR596615 (Yersinia phage fHe-Yen9-04 genome assembly, chromosome: I) position: , mismatch: 9, identity: 0.719

gaattgcaggagtggtttatcgagtgtttaca	CRISPR spacer
cagtaaaaggagtggtttatcaaatgtttatg	Protospacer
 *.* . **************.*.******..

187. spacer 3.34|963625|32|CP033348|CRISPRCasFinder,CRT matches to NC_042116 (Yersinia phage fHe-Yen9-04 genome assembly, complete genome: monopartite) position: , mismatch: 9, identity: 0.719

gaattgcaggagtggtttatcgagtgtttaca	CRISPR spacer
cagtaaaaggagtggtttatcaaatgtttatg	Protospacer
 *.* . **************.*.******..

188. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 10, identity: 0.697

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
aggaaaccgaggccgttcgcgacgtcctcgatg	Protospacer
*  .  ******.*****.***********

189. spacer 2.6|952724|33|CP033348|PILER-CR matches to NZ_CP010864 (Marinovum algicola DG 898 plasmid pMaD9, complete sequence) position: , mismatch: 10, identity: 0.697

atcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
gcgataccgaggtcgttcaggatgtcctcgcgg	Protospacer
.. .. ************* **.*******.*

190. spacer 2.17|952603|32|CP033348|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 10, identity: 0.688

tacctgacgctgatccagtcgatcgcgctgct	CRISPR spacer
tcgacgacgccgacccagtcgatcgcgccctc	Protospacer
*   .*****.**.**************. ..

191. spacer 2.17|952603|32|CP033348|CRISPRCasFinder,CRT matches to KY092480 (Streptomyces phage Picard, complete genome) position: , mismatch: 10, identity: 0.688

tacctgacgctgatccagtcgatcgcgctgct	CRISPR spacer
ggcagaccggtgatccagtcgatcgcggtgtc	Protospacer
 .*  . ** ***************** **..

192. spacer 2.19|952725|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 10, identity: 0.688

tcgccccgaggtcgttcacgacgtcctcgtgc	CRISPR spacer
ggaaaccgaggccgttcgcgacgtcctcgatg	Protospacer
  .  ******.*****.***********

193. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP010632 (Phaeobacter inhibens strain P78 plasmid pP78_c, complete sequence) position: , mismatch: 10, identity: 0.706

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
gccgccagcagagctacagcgacgccgctataca	Protospacer
    *************** .******* * .*

194. spacer 3.14|963501|34|CP033348|PILER-CR matches to NZ_CP044979 (Bacillus thuringiensis strain BT62 plasmid pBT62A, complete sequence) position: , mismatch: 10, identity: 0.706

cgtccctgctggccgttctggaattgcgtagcgc	CRISPR spacer
gtttgcatatggccgttcaggcattgcgtagcgg	Protospacer
  *. *   ********* ** ***********

195. spacer 3.14|963501|34|CP033348|PILER-CR matches to NZ_CP044979 (Bacillus thuringiensis strain BT62 plasmid pBT62A, complete sequence) position: , mismatch: 10, identity: 0.706

cgtccctgctggccgttctggaattgcgtagcgc	CRISPR spacer
gtttgcatatggccgttcaggcattgcgtagcgg	Protospacer
  *. *   ********* ** ***********

196. spacer 3.23|962953|32|CP033348|CRISPRCasFinder,CRT matches to KX911187 (Rathayibacter phage NCPPB3778, complete genome) position: , mismatch: 10, identity: 0.688

cgtagaccacctctttcgatatgtgagtgaag	CRISPR spacer
cagagcccacctctttcgacatgtgacgcctc	Protospacer
*. ** *************.******

197. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP022925 (Klebsiella pneumoniae strain ST307PT01 plasmid pJYC01B) position: , mismatch: 10, identity: 0.688

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
gcttgcgtgaactacaggaacgacgcaaggcc	Protospacer
.....   **.*********** *********

198. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to KU160664 (Arthrobacter phage Salgado, complete genome) position: , mismatch: 10, identity: 0.688

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
cgccagcagggctacagcaacgccgacatcat	Protospacer
  *******.******* *******  *   .

199. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to MF140418 (Arthrobacter phage LiSara, complete genome) position: , mismatch: 10, identity: 0.688

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
cgccagcagggctacagcaacgccgacatcat	Protospacer
  *******.******* *******  *   .

200. spacer 3.26|963136|32|CP033348|CRISPRCasFinder,CRT matches to KU160654 (Arthrobacter phage Laroye, complete genome) position: , mismatch: 10, identity: 0.688

atccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
cgccagcagggctacagcaacgccgacatcat	Protospacer
  *******.******* *******  *   .

201. spacer 3.28|963258|32|CP033348|CRISPRCasFinder,CRT matches to MN871446 (UNVERIFIED: Serratia phage KpLz-2_45, complete genome) position: , mismatch: 10, identity: 0.688

ttaaatgcatcgcgatcccttgcaattataac	CRISPR spacer
caagggatatcacgatcccttgcaattttaaa	Protospacer
. *.. ..***.*************** ***

202. spacer 3.28|963258|32|CP033348|CRISPRCasFinder,CRT matches to MN871452 (UNVERIFIED: Serratia phage KpZh_1, complete genome) position: , mismatch: 10, identity: 0.688

ttaaatgcatcgcgatcccttgcaattataac	CRISPR spacer
caagggatatcacgatcccttgcaattttaaa	Protospacer
. *.. ..***.*************** ***

203. spacer 3.28|963258|32|CP033348|CRISPRCasFinder,CRT matches to MN871447 (UNVERIFIED: Serratia phage KpLz_1_41, complete genome) position: , mismatch: 10, identity: 0.688

ttaaatgcatcgcgatcccttgcaattataac	CRISPR spacer
caagggatatcacgatcccttgcaattttaaa	Protospacer
. *.. ..***.*************** ***

204. spacer 3.28|963258|32|CP033348|CRISPRCasFinder,CRT matches to MN871449 (UNVERIFIED: Serratia phage KpXa_1, complete genome) position: , mismatch: 10, identity: 0.688

ttaaatgcatcgcgatcccttgcaattataac	CRISPR spacer
caagggatatcacgatcccttgcaattttaaa	Protospacer
. *.. ..***.*************** ***

205. spacer 3.28|963258|32|CP033348|CRISPRCasFinder,CRT matches to MN871453 (UNVERIFIED: Serratia phage KpZh_LPS_45, complete genome) position: , mismatch: 10, identity: 0.688

ttaaatgcatcgcgatcccttgcaattataac	CRISPR spacer
caagggatatcacgatcccttgcaattttaaa	Protospacer
. *.. ..***.*************** ***

206. spacer 3.28|963258|32|CP033348|CRISPRCasFinder,CRT matches to MN871451 (UNVERIFIED: Serratia phage KpYy_2_45, complete genome) position: , mismatch: 10, identity: 0.688

ttaaatgcatcgcgatcccttgcaattataac	CRISPR spacer
caagggatatcacgatcccttgcaattttaaa	Protospacer
. *.. ..***.*************** ***

207. spacer 3.28|963258|32|CP033348|CRISPRCasFinder,CRT matches to MN871448 (UNVERIFIED: Serratia phage KpSz_1, complete genome) position: , mismatch: 10, identity: 0.688

ttaaatgcatcgcgatcccttgcaattataac	CRISPR spacer
caagggatatcacgatcccttgcaattttaaa	Protospacer
. *.. ..***.*************** ***

208. spacer 3.29|963319|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP012101 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence) position: , mismatch: 10, identity: 0.688

ccgggatccgtcatcggtcgtggttcactgca	CRISPR spacer
ataagatccatcatcggtcgcggttcattcgc	Protospacer
 ...*****.**********.******.*

209. spacer 3.29|963319|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP020952 (Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence) position: , mismatch: 10, identity: 0.688

ccgggatccgtcatcggtcgtggttcactgca	CRISPR spacer
gtcgcggccgtcatcggtcttggttcaatggg	Protospacer
 . * . ************ ******* ** .

210. spacer 3.29|963319|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP031072 (Bacillus mycoides strain BPN401 plasmid pl395, complete sequence) position: , mismatch: 10, identity: 0.688

ccgggatccgtcatcggtcgtggttcactgca	CRISPR spacer
agaagatccatcatcggtcgcggttcattcgc	Protospacer
  ..*****.**********.******.*

211. spacer 3.29|963319|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP020744 (Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ccgggatccgtcatcggtcgtggttcactgca	CRISPR spacer
agaagatccatcatcggtcgcggttcattcgc	Protospacer
  ..*****.**********.******.*

212. spacer 3.29|963319|32|CP033348|CRISPRCasFinder,CRT matches to NC_018688 (Bacillus thuringiensis MC28 plasmid pMC319, complete sequence) position: , mismatch: 10, identity: 0.688

ccgggatccgtcatcggtcgtggttcactgca	CRISPR spacer
agaagatccatcatcggtcgcggttcattcgc	Protospacer
  ..*****.**********.******.*

213. spacer 3.29|963319|32|CP033348|CRISPRCasFinder,CRT matches to NZ_CP009691 (Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence) position: , mismatch: 10, identity: 0.688

ccgggatccgtcatcggtcgtggttcactgca	CRISPR spacer
agaagatccatcatcggtcgcggttcattcgc	Protospacer
  ..*****.**********.******.*

214. spacer 3.29|963319|32|CP033348|CRISPRCasFinder,CRT matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ccgggatccgtcatcggtcgtggttcactgca	CRISPR spacer
agaagatccatcatcggtcgcggttcattcgc	Protospacer
  ..*****.**********.******.*

215. spacer 3.36|963747|32|CP033348|CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

216. spacer 3.36|963747|32|CP033348|CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

217. spacer 3.8|963134|34|CP033348|PILER-CR matches to NZ_CP022925 (Klebsiella pneumoniae strain ST307PT01 plasmid pJYC01B) position: , mismatch: 11, identity: 0.676

cgatccagcagagctacaggaacgccgcaaggcc	CRISPR spacer
tggcttgcgtgaactacaggaacgacgcaaggcc	Protospacer
.*.....   **.*********** *********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1673483 : 1682654

Enterobacteria_phage(66.67%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX50301.1\|1673483_1674431_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-23	31.2
QAX50302.1\|1674414_1675146_+	ABC transporter permease	NA	NA	NA	NA
QAX50303.1\|1675126_1675234_-	protein YohO	NA	NA	NA	NA
QAX50304.1\|1675293_1676025_-	transcriptional regulator	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
QAX50305.1\|1676247_1677933_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
QAX50306.1\|1677929_1678649_+	DNA-binding response regulator	NA	NA	NA	NA
QAX50307.1\|1678695_1679163_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
QAX50308.1\|1679219_1679750_-	DUF1307 domain-containing protein	NA	NA	NA	NA
QAX50309.1\|1679921_1680380_-	DUF1307 domain-containing protein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
QAX50310.1\|1680620_1682654_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_2

1749850 : 1756147

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX50364.1\|1749850_1751254_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	4.0e-21	26.5
QAX50365.1\|1751431_1752325_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	3.1e-43	41.9
QAX50366.1\|1752701_1753787_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.2e-102	53.9
QAX50367.1\|1753786_1754686_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.4e-30	36.3
QAX53125.1\|1754733_1755612_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.7e-107	64.1
QAX50368.1\|1755616_1756147_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	3.7e-52	57.6

DBSCAN-SWA_3

1843208 : 1856510

Acidithiobacillus_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX50449.1\|1843208_1843733_-	peptidase	G9L6C4	Escherichia_phage	3.3e-37	77.9
QAX50450.1\|1844379_1844670_-	DUF4102 domain-containing protein	B7SYF8	Stenotrophomonas_phage	2.3e-08	50.9
QAX50451.1\|1845041_1845839_-	DgsA anti-repressor MtfA	NA	NA	NA	NA
QAX50452.1\|1846367_1847123_-	AAA family ATPase	K4HZD4	Acidithiobacillus_phage	2.8e-45	44.3
QAX50453.1\|1847139_1848675_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	8.6e-102	40.7
QAX50454.1\|1848953_1849115_+	hypothetical protein	NA	NA	NA	NA
QAX50455.1\|1849241_1849661_+	protein UmuD	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
QAX50456.1\|1849663_1850932_+	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	1.2e-226	91.9
QAX50457.1\|1851386_1851599_+	cold-shock protein CspJ	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
QAX53130.1\|1851609_1851798_+	cold-shock protein	NA	NA	NA	NA
QAX50458.1\|1852058_1853270_-	porin OmpS1	Q1MVN1	Enterobacteria_phage	1.3e-108	56.0
QAX50459.1\|1853919_1854231_+	hypothetical protein	NA	NA	NA	NA
QAX50460.1\|1854310_1855006_+	phosphohydrolase	S4W232	Pandoravirus	2.8e-07	28.0
QAX50461.1\|1855079_1856510_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4

DBSCAN-SWA_4

1946028 : 1993442

Enterobacteria_phage(21.43%)

transposase,tail,integrase,protease

attL 1966226:1966241|attR 1995497:1995512

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX50554.1\|1946028_1947284_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	2.4e-17	33.9
QAX50555.1\|1947418_1948861_-	pyruvate kinase II	NA	NA	NA	NA
QAX50556.1\|1948984_1949854_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
QAX50557.1\|1950037_1950223_-	hypothetical protein	NA	NA	NA	NA
QAX50558.1\|1950195_1951671_+	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	2.6e-79	37.5
QAX50559.1\|1951905_1953717_+	phosphogluconate dehydratase	NA	NA	NA	NA
QAX50560.1\|1953754_1954396_+	keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase	NA	NA	NA	NA
QAX50561.1\|1954495_1955674_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
QAX50562.1\|1955804_1956095_+	DNA damage-inducible protein YebG	NA	NA	NA	NA
QAX50563.1\|1956162_1956516_+	hypothetical protein	NA	NA	NA	NA
QAX50564.1\|1956609_1957269_+	tellurite resistance TerB family protein	NA	NA	NA	NA
QAX50565.1\|1957481_1959533_+	oligopeptidase B	NA	NA	NA	NA
QAX50566.1\|1959569_1960268_-	exodeoxyribonuclease X	Q6UAU3	Klebsiella_phage	2.8e-07	40.4
QAX50567.1\|1960291_1960948_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
QAX50568.1\|1961055_1961286_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.9e-14	60.3
QAX50569.1\|1961423_1961798_+	CopC domain-containing protein YobA	NA	NA	NA	NA
QAX50570.1\|1961798_1962674_+	copper resistance D family protein	NA	NA	NA	NA
QAX50571.1\|1962690_1963044_+	DUF2511 domain-containing protein	NA	NA	NA	NA
QAX50572.1\|1963101_1963221_+	hypothetical protein	NA	NA	NA	NA
QAX50573.1\|1963426_1964506_-\|integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	6.3e-99	52.0
QAX53133.1\|1964502_1965450_-	exodeoxyribonuclease 8	Q9QF34	Lambdoid_phage	1.2e-53	65.0
QAX50574.1\|1965639_1965870_+	glycoside hydrolase family 19 protein	Q8HA86	Salmonella_phage	6.1e-28	93.7
1966226:1966241	attL	NA	NA	NA	NA
QAX50575.1\|1966314_1967850_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	8.6e-102	40.7
QAX50576.1\|1967866_1968622_+	AAA family ATPase	K4HZD4	Acidithiobacillus_phage	2.8e-45	44.3
QAX50577.1\|1969358_1969526_-	lytic enzyme	NA	NA	NA	NA
QAX50578.1\|1969590_1969779_-	hypothetical protein	NA	NA	NA	NA
QAX50579.1\|1971228_1971429_-	phage virulence factor	NA	NA	NA	NA
QAX50580.1\|1971619_1971736_-\|tail	phage tail protein	NA	NA	NA	NA
QAX50581.1\|1971998_1972124_+	arsenic transporter	NA	NA	NA	NA
QAX50582.1\|1972252_1972519_+	hypothetical protein	NA	NA	NA	NA
QAX50583.1\|1973271_1973886_-	disulfide bond formation protein B	NA	NA	NA	NA
QAX50584.1\|1973895_1974054_-	hypothetical protein	NA	NA	NA	NA
QAX50585.1\|1974186_1975101_-	protein PagO	NA	NA	NA	NA
QAX53134.1\|1975718_1975919_+	hypothetical protein	NA	NA	NA	NA
QAX50586.1\|1976386_1976755_-\|integrase	integrase	K7PHK0	Enterobacteria_phage	7.0e-18	39.8
QAX50587.1\|1978218_1978359_-	hypothetical protein	NA	NA	NA	NA
QAX50588.1\|1978524_1978794_-	hypothetical protein	Q6UAV5	Klebsiella_phage	4.5e-06	44.4
QAX50589.1\|1978840_1979035_+	hypothetical protein	NA	NA	NA	NA
QAX50590.1\|1979164_1979584_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
QAX50591.1\|1979956_1980433_-	hypothetical protein	NA	NA	NA	NA
QAX50592.1\|1980762_1981158_-	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	9.2e-16	32.8
QAX50593.1\|1981841_1982564_+	SPI-1 type III secretion system guanine nucleotide exchange factor SopE2	NA	NA	NA	NA
QAX50594.1\|1982848_1983013_+	hypothetical protein	NA	NA	NA	NA
QAX50595.1\|1983236_1983887_+	serine/threonine-protein phosphatase 1	A0A222YWF0	Escherichia_phage	1.1e-58	51.4
QAX50596.1\|1983905_1984097_-	DUF1482 family protein	NA	NA	NA	NA
QAX50597.1\|1984207_1984447_-	DUF1480 family protein	NA	NA	NA	NA
QAX53135.1\|1984561_1986001_-	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
QAX50598.1\|1986078_1988718_-	PqiB family protein	NA	NA	NA	NA
QAX50599.1\|1988680_1989964_-	paraquat-inducible protein A	NA	NA	NA	NA
QAX50600.1\|1990005_1990590_+	GAF domain-containing protein	NA	NA	NA	NA
QAX50601.1\|1990687_1991374_+	RNA chaperone ProQ	NA	NA	NA	NA
QAX50602.1\|1991393_1993442_+\|tail,protease	tail-specific protease	A0A0R6PIZ1	Moraxella_phage	8.0e-87	33.5
1995497:1995512	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2798833 : 2877067

Bacillus_phage(16.0%)

integrase,tRNA,transposase,protease

attL 2819810:2819826|attR 2871634:2871650

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX51387.1\|2798833_2800234_+\|tRNA	asparagine--tRNA ligase	A0A167RLM0	Powai_lake_megavirus	1.7e-80	34.9
QAX51388.1\|2800840_2801932_+	porin OmpF	Q1MVN1	Enterobacteria_phage	1.7e-99	51.7
QAX51389.1\|2802116_2803307_+	aspartate aminotransferase	NA	NA	NA	NA
QAX51390.1\|2803368_2804016_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
QAX51391.1\|2804043_2804592_-	DUF882 domain-containing protein	A0A0K1LKR7	Rhodobacter_phage	1.2e-05	33.7
QAX51392.1\|2804851_2806699_-	L,D-transpeptidase	NA	NA	NA	NA
QAX51393.1\|2807043_2811510_-	chromosome partition protein MukB	NA	NA	NA	NA
QAX51394.1\|2811509_2812214_-	chromosome partition protein MukE	NA	NA	NA	NA
QAX51395.1\|2812194_2813517_-	chromosome partition protein MukF	NA	NA	NA	NA
QAX51396.1\|2813509_2814313_-\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
QAX51397.1\|2814448_2815225_+	envelope biogenesis factor ElyC	NA	NA	NA	NA
QAX51398.1\|2815204_2816098_-	hypothetical protein	NA	NA	NA	NA
QAX51399.1\|2816308_2817055_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
QAX51400.1\|2817051_2817234_-	protein YcaR	NA	NA	NA	NA
QAX51401.1\|2817285_2818518_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
QAX51402.1\|2818561_2819539_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
QAX51403.1\|2819535_2821284_-	lipid A export ATP-binding/permease MsbA	W8CYL7	Bacillus_phage	3.2e-60	30.5
2819810:2819826	attL	NA	NA	NA	NA
QAX51404.1\|2821320_2823585_-	ComEC family protein	Q332C0	Clostridium_botulinum_C_phage	8.8e-10	22.5
QAX51405.1\|2823761_2825017_-\|transposase	IS3-like element ISSen1 family transposase	Q6H9S3	Enterobacteria_phage	4.8e-18	34.5
QAX51406.1\|2825129_2825414_-	integration host factor subunit beta	A7KV42	Bacillus_phage	4.1e-10	40.2
QAX51407.1\|2825569_2827243_-	30S ribosomal protein S1	NA	NA	NA	NA
QAX51408.1\|2827356_2828040_-	cytidylate kinase	NA	NA	NA	NA
QAX51409.1\|2828212_2828974_-\|protease	metalloprotease	NA	NA	NA	NA
QAX51410.1\|2829116_2830400_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
QAX51411.1\|2830465_2831554_-	3-phosphoserine/phosphohydroxythreonine aminotransferase	M1Q1P2	Streptococcus_phage	2.8e-78	46.5
QAX51412.1\|2831739_2832432_-	DUF421 domain-containing protein	NA	NA	NA	NA
QAX53174.1\|2832568_2834329_+	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA
QAX51413.1\|2834733_2835591_+	formate transporter FocA	NA	NA	NA	NA
QAX51414.1\|2835650_2837933_+	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.1e-161	42.0
QAX51415.1\|2838008_2838968_-	SPI-2 type III secretion system effector SopD2	NA	NA	NA	NA
QAX51416.1\|2839098_2839425_+	cytoplasmic protein	NA	NA	NA	NA
QAX51417.1\|2839516_2840341_+	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	2.8e-22	26.5
QAX51418.1\|2840632_2842054_-	amino acid permease	NA	NA	NA	NA
QAX51419.1\|2842271_2843420_-	MFS transporter	NA	NA	NA	NA
QAX51420.1\|2843769_2844633_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
QAX51421.1\|2844634_2845252_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	4.3e-76	59.6
QAX51422.1\|2845262_2847707_-	dimethylsulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	7.0e-223	50.5
QAX51423.1\|2847943_2849236_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	8.6e-95	44.5
QAX51424.1\|2849494_2850838_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	1.6e-80	40.9
QAX51425.1\|2850847_2851459_-	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
QAX53175.1\|2851601_2855606_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	2.9e-88	49.5
QAX51426.1\|2855740_2856235_-	leucine-responsive regulatory protein	NA	NA	NA	NA
QAX51427.1\|2856780_2857749_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	2.9e-63	45.8
QAX51428.1\|2857862_2859629_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	1.6e-22	25.3
QAX51429.1\|2859629_2861351_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	2.2e-13	23.5
QAX51430.1\|2861395_2862100_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
QAX51431.1\|2862100_2862484_+	hypothetical protein	NA	NA	NA	NA
QAX51432.1\|2862411_2862630_+	translation initiation factor IF-1	NA	NA	NA	NA
QAX51433.1\|2862720_2863632_-	LysR family transcriptional regulator	NA	NA	NA	NA
QAX51434.1\|2863740_2864601_+	pirin family protein	NA	NA	NA	NA
QAX51435.1\|2864620_2865298_+	hydrolase	NA	NA	NA	NA
QAX51436.1\|2866123_2866879_-	AAA family ATPase	K4HZD4	Acidithiobacillus_phage	2.8e-45	44.3
QAX51437.1\|2866895_2868431_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	8.6e-102	40.7
QAX51438.1\|2869754_2870075_+\|integrase	integrase	NA	NA	NA	NA
QAX51439.1\|2870293_2870491_+	hypothetical protein	NA	NA	NA	NA
QAX51440.1\|2870703_2872980_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
2871634:2871650	attR	NA	NA	NA	NA
QAX51441.1\|2873010_2873331_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
QAX51442.1\|2873654_2873876_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
QAX51443.1\|2873830_2874025_-	hypothetical protein	NA	NA	NA	NA
QAX51444.1\|2874005_2875952_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	9.1e-40	42.3
QAX51445.1\|2875948_2877067_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.4e-08	38.9

DBSCAN-SWA_6

2910481 : 2944419

Salmonella_phage(92.31%)

tail,capsid,head,lysis,plate,portal,integrase

attL 2910391:2910410|attR 2944494:2944513

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2910391:2910410	attL	NA	NA	NA	NA
QAX51479.1\|2910481_2910700_-	transcriptional regulator	Q53ZE7	Salmonella_virus	7.5e-20	69.0
QAX51480.1\|2911895_2912381_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	8.3e-67	99.2
QAX51481.1\|2912377_2915185_-\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	98.9
QAX51482.1\|2915177_2915297_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	1.8e-15	100.0
QAX51483.1\|2915311_2915614_-\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	2.5e-45	100.0
QAX51484.1\|2915668_2916184_-\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	3.0e-91	98.2
QAX51485.1\|2916193_2917366_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	5.7e-223	99.7
QAX51486.1\|2917468_2918026_-	recombinase family protein	A0A1S6L009	Salmonella_phage	7.2e-99	98.4
QAX51487.1\|2918055_2919045_+\|tail	phage tail protein	A0A1S6KZZ0	Salmonella_phage	4.3e-187	95.7
QAX51488.1\|2919014_2919632_+\|tail	tail fiber assembly protein	A0A1S6KZY8	Salmonella_phage	4.8e-112	99.0
QAX51489.1\|2919635_2920175_-\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	6.1e-95	97.2
QAX51490.1\|2920177_2921833_-\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	0.0e+00	98.9
QAX51491.1\|2921829_2922435_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	3.4e-118	99.5
QAX51492.1\|2922427_2923336_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	5.4e-160	100.0
QAX51493.1\|2923322_2923682_-\|plate	baseplate assembly protein	E5G6N7	Salmonella_phage	1.0e-58	98.3
QAX51494.1\|2923678_2924257_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	3.9e-108	99.5
QAX51495.1\|2924325_2924772_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	3.2e-65	89.7
QAX51496.1\|2924764_2925196_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	1.9e-70	92.3
QAX51497.1\|2925291_2925720_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	1.7e-63	94.3
QAX53178.1\|2925716_2926193_-	lysozyme	E5G6N1	Salmonella_phage	1.5e-81	91.1
QAX51498.1\|2926212_2926428_-	hypothetical protein	E5G6N0	Salmonella_phage	1.8e-26	80.3
QAX51499.1\|2926431_2926635_-\|tail	phage tail protein	E5G6M9	Salmonella_phage	3.0e-31	91.0
QAX51500.1\|2926634_2927099_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	4.2e-76	89.0
QAX51501.1\|2927194_2927845_-	hypothetical protein	E5G6M7	Salmonella_phage	7.3e-111	95.4
QAX51502.1\|2927848_2928907_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	8.4e-181	93.1
QAX51503.1\|2928923_2929757_-\|capsid	capsid protein	A0A1S6KZW9	Salmonella_phage	2.4e-122	91.0
QAX51504.1\|2929899_2931666_+	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.3
QAX51505.1\|2931665_2932697_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	4.2e-169	87.3
QAX51506.1\|2932746_2934504_-	RNA-directed DNA polymerase	NA	NA	NA	NA
QAX51507.1\|2935065_2936367_-	hypothetical protein	NA	NA	NA	NA
QAX51508.1\|2936867_2937056_-	hypothetical protein	E5G6M0	Salmonella_phage	1.6e-26	96.8
QAX51509.1\|2937238_2939623_-	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.6
QAX51510.1\|2939619_2940477_-	DNA adenine methylase	E5G6L8	Salmonella_phage	1.5e-159	96.1
QAX51511.1\|2940473_2940701_-	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	3.5e-36	98.7
QAX51512.1\|2940700_2940934_-	DUF2732 family protein	E5G6L6	Salmonella_phage	6.4e-33	98.7
QAX51513.1\|2941001_2941343_-	hypothetical protein	E5G6L5	Salmonella_phage	5.1e-55	97.3
QAX51514.1\|2941306_2941507_-	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	7.1e-33	98.5
QAX51515.1\|2941514_2942024_-	phage regulatory CII family protein	E5G6L3	Salmonella_phage	1.3e-86	98.2
QAX51516.1\|2942056_2942278_-	regulator	NA	NA	NA	NA
QAX51517.1\|2942403_2942973_+	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	2.5e-38	43.4
QAX51518.1\|2942988_2943180_+	hypothetical protein	A0A0R6PIH8	Moraxella_phage	2.4e-09	70.5
QAX51519.1\|2943366_2944419_+\|integrase	integrase	A0A218M4I3	Erwinia_phage	2.2e-104	55.8
2944494:2944513	attR	NA	NA	NA	NA

DBSCAN-SWA_7

4442130 : 4480567

Escherichia_phage(38.64%)

transposase,tail,holin,head,capsid,lysis,plate,portal,integrase,terminase

attL 4441973:4442019|attR 4475942:4475988

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4441973:4442019	attL	NA	NA	NA	NA
QAX52828.1\|4442130_4442385_-	DNA-binding transcriptional regulator	M1SNR2	Escherichia_phage	1.3e-44	100.0
QAX52829.1\|4442430_4443594_-	phage late control D family protein	U5N3V4	Enterobacteria_phage	7.0e-205	99.2
QAX52830.1\|4443593_4444073_-\|tail	phage tail protein	O64315	Escherichia_phage	1.5e-84	99.4
QAX52831.1\|4444087_4446535_-\|tail	phage tail tape measure protein	M1T2S3	Escherichia_phage	0.0e+00	97.1
QAX52832.1\|4446527_4446647_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
QAX52833.1\|4446679_4446955_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	2.2e-40	98.9
QAX52834.1\|4447011_4447530_-\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	1.4e-93	100.0
QAX52835.1\|4447542_4448733_-\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	4.8e-225	99.5
QAX52836.1\|4448792_4449386_-	recombinase family protein	A0A0F7LA37	Escherichia_phage	1.3e-103	97.0
QAX53235.1\|4449605_4450094_+\|tail	phage tail protein	A0A1S6KZZ0	Salmonella_phage	2.1e-70	82.6
QAX52837.1\|4450063_4450681_+\|tail	tail assembly chaperone	A0A1S6KZY8	Salmonella_phage	5.3e-95	83.6
QAX52838.1\|4450685_4451219_-\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	5.7e-77	80.3
QAX52839.1\|4451221_4452784_-\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	1.5e-154	49.4
QAX52840.1\|4452780_4453392_-\|tail	phage tail protein I	A0A0F7LA36	Escherichia_phage	6.4e-117	99.5
QAX52841.1\|4453384_4454293_-\|plate	baseplate assembly protein	Q858V6	Yersinia_virus	8.8e-163	100.0
QAX52842.1\|4454297_4454645_-\|plate	baseplate assembly protein	A0A0F7L9X3	Escherichia_phage	1.7e-58	100.0
QAX52843.1\|4454641_4455277_-\|plate	phage baseplate assembly protein V	U5N3F0	Enterobacteria_phage	9.0e-114	99.1
QAX52844.1\|4455343_4455796_-	phage virion morphogenesis protein	A0A0F7LBV9	Escherichia_phage	6.3e-77	100.0
QAX52845.1\|4455788_4456256_-\|tail	phage tail protein	A0A0F7LA33	Escherichia_phage	8.7e-82	98.7
QAX52846.1\|4456218_4456392_-\|lysis	phage lysis protein	Q7Y4E1	Escherichia_virus	2.3e-24	96.5
QAX52847.1\|4456363_4456789_-\|lysis	LysB family phage lysis regulatory protein	U5N3W5	Enterobacteria_phage	4.7e-66	96.5
QAX52848.1\|4456776_4457202_-	protein lysA	U5N096	Enterobacteria_phage	2.8e-58	95.7
QAX52849.1\|4457216_4457714_-	lysozyme	A0A0F7LBS0	Escherichia_phage	3.1e-93	100.0
QAX52850.1\|4457713_4457995_-\|holin	holin	A0A0F7LDF8	Escherichia_phage	3.7e-43	100.0
QAX52851.1\|4457998_4458202_-\|tail	phage tail protein	U5N3E7	Enterobacteria_phage	4.0e-31	100.0
QAX52852.1\|4458201_4458711_-\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	1.1e-90	100.0
QAX52853.1\|4458810_4459554_-\|terminase	terminase	U5N091	Enterobacteria_phage	3.3e-123	97.2
QAX52854.1\|4459557_4460631_-\|capsid	phage major capsid protein, P2 family	Q94MD1	Enterobacteria_phage	5.1e-202	100.0
QAX52855.1\|4460689_4461544_-\|capsid	capsid scaffolding protein	Q94MI4	Enterobacteria_phage	9.0e-133	96.5
QAX52856.1\|4462803_4463559_-	AAA family ATPase	K4HZD4	Acidithiobacillus_phage	2.8e-45	44.3
QAX52857.1\|4463575_4465111_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	8.6e-102	40.7
QAX52858.1\|4466135_4467170_+\|portal	phage portal protein	A0A0F7LDI7	Escherichia_phage	1.2e-200	99.7
QAX52859.1\|4467600_4469808_+	hypothetical protein	NA	NA	NA	NA
QAX52860.1\|4470038_4472327_-	replication endonuclease	Q858T4	Yersinia_virus	0.0e+00	97.0
QAX52861.1\|4472316_4472592_-	hypothetical protein	U5N3W1	Enterobacteria_phage	1.6e-43	97.8
QAX52862.1\|4472588_4472813_-	TraR/DksA family transcriptional regulator	A0A0F7LDG9	Escherichia_phage	8.5e-35	97.3
QAX52863.1\|4472812_4473115_-	hypothetical protein	U5N0U2	Enterobacteria_phage	2.5e-45	97.0
QAX52864.1\|4473114_4473339_-	DUF2732 family protein	S4TP68	Salmonella_phage	2.3e-32	98.6
QAX52865.1\|4473402_4473903_-	replication protein B	A0A0F7LBQ6	Escherichia_phage	4.5e-92	100.0
QAX52866.1\|4474072_4474345_-	hypothetical protein	Q1JS36	Enterobacteria_phage	1.4e-47	100.0
QAX52867.1\|4474481_4474775_+	helix-turn-helix domain-containing protein	Q1JS37	Enterobacteria_phage	2.7e-49	100.0
QAX52868.1\|4474844_4475825_+\|integrase	integrase	S4TP66	Salmonella_phage	4.7e-186	100.0
QAX52869.1\|4476010_4476511_-	cell-envelope stress modulator CpxP	NA	NA	NA	NA
4475942:4475988	attR	NA	NA	NA	NA
QAX52870.1\|4476661_4477360_+	envelope stress response regulator transcription factor CpxR	Q6XM27	Feldmannia_irregularis_virus	5.3e-06	30.3
QAX52871.1\|4477356_4478730_+	envelope stress sensor histidine kinase CpxA	W8CYF6	Bacillus_phage	7.2e-15	25.6
QAX52872.1\|4478780_4479176_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
QAX52873.1\|4479187_4479940_-	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA
QAX52874.1\|4479946_4480567_-	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	2.4e-63	58.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP033347

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

108602 : 196024

Escherichia_phage(17.86%)

transposase,integrase

attL 121665:121724|attR 189098:189946

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX48593.1\|108602_109775_+\|transposase	IS21 family transposase	U5N3F9	Enterobacteria_phage	5.4e-229	99.2
QAX48594.1\|109771_110572_+	AAA family ATPase	U5N3V8	Enterobacteria_phage	6.6e-146	100.0
QAX48595.1\|110610_110976_-	hypothetical protein	NA	NA	NA	NA
QAX48596.1\|111318_111711_+	hypothetical protein	NA	NA	NA	NA
QAX48597.1\|111689_112001_+	hypothetical protein	NA	NA	NA	NA
QAX48775.1\|112314_112608_+	XRE family transcriptional regulator	NA	NA	NA	NA
QAX48598.1\|112612_113938_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
QAX48599.1\|113998_114205_+	hypothetical protein	NA	NA	NA	NA
QAX48600.1\|114306_114717_+	hypothetical protein	NA	NA	NA	NA
QAX48601.1\|114729_115545_+	HNH endonuclease	G0X580	Salmonella_phage	1.1e-15	36.5
QAX48602.1\|115798_116224_+	hypothetical protein	NA	NA	NA	NA
QAX48603.1\|116772_117081_+	hypothetical protein	NA	NA	NA	NA
QAX48604.1\|117096_117954_+	HNH endonuclease	G0X580	Salmonella_phage	3.9e-11	34.2
QAX48605.1\|118015_118219_+	hypothetical protein	NA	NA	NA	NA
QAX48606.1\|118305_118485_-	hypothetical protein	NA	NA	NA	NA
QAX48607.1\|118907_119612_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAX48608.1\|119905_120721_-	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	4.8e-160	98.2
QAX48609.1\|120896_121601_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
121665:121724	attL	NA	NA	NA	NA
QAX48610.1\|122641_123151_+	peptidase M14	NA	NA	NA	NA
QAX48611.1\|123256_125158_+	ATP-dependent endonuclease	NA	NA	NA	NA
QAX48612.1\|125288_125483_+	hypothetical protein	NA	NA	NA	NA
QAX48613.1\|125544_125724_-	hypothetical protein	NA	NA	NA	NA
QAX48614.1\|127414_127756_+	RamA family antibiotic efflux transcriptional regulator	D0R0F8	Streptococcus_phage	2.0e-06	29.8
QAX48615.1\|128513_128702_+	hypothetical protein	NA	NA	NA	NA
QAX48616.1\|128789_130226_+	glutathione synthase	NA	NA	NA	NA
QAX48617.1\|130643_131648_+\|transposase	IS110 family transposase	NA	NA	NA	NA
QAX48618.1\|131914_132619_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAX48619.1\|132509_133469_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.7e-47	40.5
QAX48776.1\|133617_134409_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA22	NA	NA	NA	NA
QAX48620.1\|134540_135362_+	lincosamide nucleotidyltransferase Lnu(F)	NA	NA	NA	NA
QAX48621.1\|135514_136219_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAX48777.1\|136291_136531_+	macrolide transporter	A0A2K5B2B5	Erysipelothrix_phage	9.5e-08	46.2
QAX48622.1\|136676_137540_+	SDR family NAD(P)-dependent oxidoreductase	W8CYX9	Bacillus_phage	2.5e-05	31.0
QAX48623.1\|137577_137823_+	hypothetical protein	NA	NA	NA	NA
QAX48624.1\|138291_139083_+	sulfonamide-resistant dihydropteroate synthase Sul3	A0A0B5J4J5	Pandoravirus	1.2e-14	26.5
QAX48625.1\|140045_140711_-	hypothetical protein	NA	NA	NA	NA
QAX48626.1\|140768_141149_-	hypothetical protein	NA	NA	NA	NA
QAX48627.1\|141898_142741_+\|transposase	transposase	NA	NA	NA	NA
QAX48628.1\|142727_144851_+\|transposase	transposase	NA	NA	NA	NA
QAX48629.1\|144850_146299_+	ATP-binding protein	NA	NA	NA	NA
QAX48630.1\|146339_147896_+\|transposase	transposase	NA	NA	NA	NA
QAX48631.1\|147907_148834_+	hypothetical protein	NA	NA	NA	NA
QAX48632.1\|149186_149486_+	XRE family transcriptional regulator	NA	NA	NA	NA
QAX48633.1\|150049_151876_+	OLD family endonuclease	E5E3R2	Burkholderia_phage	4.7e-14	22.8
QAX48634.1\|152044_152395_-	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	1.8e-18	50.5
QAX48635.1\|152542_152974_-	silver-binding protein SilE	NA	NA	NA	NA
QAX48636.1\|153218_154700_-	Cu(+)/Ag(+) sensor histidine kinase	W8CYF6	Bacillus_phage	1.8e-27	30.1
QAX48637.1\|154692_155373_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	2.7e-31	36.0
QAX48638.1\|155562_156948_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
QAX48639.1\|156975_157329_+	copper ABC transporter substrate-binding protein	NA	NA	NA	NA
QAX48640.1\|157442_158735_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
QAX48641.1\|158745_161892_+	CusA/CzcA family heavy metal efflux RND transporter	S5VTK5	Leptospira_phage	2.1e-62	22.4
QAX48642.1\|161978_162419_+	hypothetical protein	NA	NA	NA	NA
QAX48643.1\|162546_164994_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	2.9e-83	35.4
QAX48644.1\|165034_165232_+	DUF2933 domain-containing protein	NA	NA	NA	NA
QAX48645.1\|165265_166003_-	peptidase	A0A2H4JAF5	uncultured_Caudovirales_phage	1.3e-10	31.9
QAX48646.1\|166291_166741_-	copper resistance protein	NA	NA	NA	NA
QAX48647.1\|166975_168793_+	multicopper oxidase PcoA	NA	NA	NA	NA
QAX48648.1\|168792_169689_+	copper resistance protein B	NA	NA	NA	NA
QAX48649.1\|170103_170859_-	AAA family ATPase	K4HZD4	Acidithiobacillus_phage	2.8e-45	44.3
QAX48650.1\|170875_172411_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	8.6e-102	40.7
QAX48651.1\|173192_173531_+	copper resistance protein CopC	NA	NA	NA	NA
QAX48652.1\|173535_174465_+	copper resistance protein D	NA	NA	NA	NA
QAX48653.1\|174519_175200_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	8.7e-30	34.4
QAX48654.1\|175196_176597_+	sensor histidine kinase	W8CYF6	Bacillus_phage	3.2e-18	26.6
QAX48655.1\|176814_177249_+	copper-binding protein	NA	NA	NA	NA
QAX48656.1\|177628_178447_+	DUF4942 domain-containing protein	NA	NA	NA	NA
QAX48657.1\|178443_179649_+	ATP/GTP-binding protein	NA	NA	NA	NA
QAX48658.1\|179712_179916_-	hypothetical protein	NA	NA	NA	NA
QAX48659.1\|179928_181248_-	DUF1173 family protein	NA	NA	NA	NA
QAX48660.1\|181498_182926_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	3.4e-100	52.3
QAX48661.1\|183140_183656_+	thermonuclease family protein	A0A1X6WF84	Pacmanvirus	2.1e-07	38.6
QAX48662.1\|183658_184555_+	hypothetical protein	NA	NA	NA	NA
QAX48778.1\|184776_185010_+	hypothetical protein	NA	NA	NA	NA
QAX48663.1\|185055_185310_+	hypothetical protein	NA	NA	NA	NA
QAX48664.1\|185347_185635_+	hypothetical protein	NA	NA	NA	NA
QAX48665.1\|185671_185902_+	hypothetical protein	NA	NA	NA	NA
QAX48666.1\|186238_186700_+	hypothetical protein	NA	NA	NA	NA
QAX48667.1\|186729_187137_+	hypothetical protein	NA	NA	NA	NA
QAX48779.1\|187187_187505_-	hypothetical protein	NA	NA	NA	NA
QAX48780.1\|187881_188232_-	hypothetical protein	NA	NA	NA	NA
QAX48781.1\|190096_190489_+	cysteine hydrolase	NA	NA	NA	NA
189098:189946	attR	NA	NA	NA	NA
QAX48668.1\|190626_191511_+	EamA family transporter	NA	NA	NA	NA
QAX48669.1\|191542_192742_-	tetracycline efflux MFS transporter Tet(A)	NA	NA	NA	NA
QAX48670.1\|192820_193498_+	TetR family transcriptional regulator	NA	NA	NA	NA
QAX48671.1\|193529_193772_-	relaxase	NA	NA	NA	NA
QAX48672.1\|194077_194914_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
QAX48673.1\|195319_196024_-\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6

DBSCAN-SWA_2

199315 : 232888

Escherichia_phage(41.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX48676.1\|199315_200809_-\|transposase	IS91 family transposase	NA	NA	NA	NA
QAX48677.1\|201019_201244_-	hypothetical protein	NA	NA	NA	NA
QAX48678.1\|201735_202440_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAX48679.1\|202476_203604_-	DUF3883 domain-containing protein	NA	NA	NA	NA
QAX48680.1\|203654_203900_-	hypothetical protein	NA	NA	NA	NA
QAX48681.1\|203905_204097_+	hypothetical protein	NA	NA	NA	NA
QAX48682.1\|208211_209069_-	class A beta-lactamase LAP-2	Q1MVP3	Enterobacteria_phage	2.0e-92	61.1
QAX48782.1\|209133_210864_-	cell division protein FtsI	NA	NA	NA	NA
QAX48683.1\|211272_212133_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
QAX48684.1\|212315_212873_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
QAX48685.1\|213436_214699_+\|transposase	IS1380 family transposase ISEc9	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
QAX48686.1\|214954_215830_+	class A extended-spectrum beta-lactamase CTX-M-55	A0A1B0VBP7	Salmonella_phage	2.4e-125	82.1
QAX48687.1\|215876_216209_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
QAX48688.1\|220470_221127_+	quinolone resistance pentapeptide repeat protein QnrS1	NA	NA	NA	NA
QAX48689.1\|221906_223298_-\|transposase	ISKra4-like element ISKpn19 family transposase	NA	NA	NA	NA
QAX48690.1\|223334_223907_-	recombinase family protein	M9Q1K0	Clostridium_phage	3.4e-19	39.4
QAX48691.1\|224043_224634_-	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA
QAX48692.1\|224740_225445_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAX48783.1\|225415_225775_+	DDE domain-containing protein	A0A077SL39	Escherichia_phage	1.7e-13	64.6
QAX48693.1\|225965_226322_-	hypothetical protein	NA	NA	NA	NA
QAX48694.1\|226267_226852_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
QAX48695.1\|226851_228090_-	MFS transporter	NA	NA	NA	NA
QAX48696.1\|228086_228992_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
QAX48697.1\|229113_229818_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAX48698.1\|230494_230947_-	NAD(+)--rifampin ADP-ribosyltransferase Arr-2	NA	NA	NA	NA
QAX48784.1\|231057_231531_-	trimethoprim-resistant dihydrofolate reductase DfrA14	G3MBI7	Bacillus_virus	8.4e-16	28.9
QAX48699.1\|232183_232888_-\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP033348

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP033347

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection