CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP012670	Sorangium cellulosum strain So ceGT47 chromosome, complete genome	38 crisprs	cas7,cas8u1,cas3,cas1,cas2,csb2gr5,cas10,cmr3gr5,cmr1gr7,cmr4gr7,cmr5gr11,cmr6gr7,csa3,PD-DExK,DEDDh,RT,WYL,DinG	7	36	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP012670_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_1

122934-123024

Orphan

Consensus_repeat	Method
GTGCGCCCCCCGCGCCCGCGGCGGGCGCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_1

>merge|CP012670|1|122934-123024|CRISPRCasFinder
GTGCGCCCCCCGCGCCCGCGGCGGGCGCGGTGCAGTACAGGGAGACGGATCTCCAGTTCGCGTGCGTCCCCCGCGCCCGCGGCGGGCGCGG

>CP012670|1|1|122934-123024|CRISPRCasFinder
GTGCGCCCCCCGCGCCCGCGGCGGGCGCGG	TGCAGTACAGGGAGACGGATCTCCAGTTCGC
GTGCGTCCCCCGCGCCCGCGGCGGGCGCGG

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX19645.1\|125023_125755_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX19637.1\|114308_115712_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|377630
CP012670.1\|AUX19649.1\|130528_131122_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|99749
CP012670.1\|AUX19638.1\|115798_116662_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX19641.1\|121341_122739_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|224004
CP012670.1\|AUX19642.1\|123088_123232_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX19634.1\|111332_112331_-\|acetylornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|235304
CP012670.1\|AUX19648.1\|129814_130471_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|153097
CP012670.1\|AUX19635.1\|112549_112894_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|239091
CP012670.1\|AUX19639.1\|116840_120650_-\|ATP-dependent-deoxyribonuclease-subunit-A	unknown	unknown	gnl\|CDD\|224000
CP012670.1\|AUX19644.1\|124101_125010_+\|1,4-dihydroxy-2-naphthoate-octaprenyltransferase	unknown	unknown	gnl\|CDD\|260125
CP012670.1\|AUX19636.1\|113195_113756_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX19647.1\|128400_129702_+\|sodium:proton-antiporter	unknown	unknown	gnl\|CDD\|223104
CP012670.1\|AUX19650.1\|131261_132275_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX19632.1\|107909_109730_-\|porin	unknown	unknown	gnl\|CDD\|143586
CP012670.1\|AUX19646.1\|125820_127368_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX19633.1\|109986_111333_-\|acetylglutamate-kinase	unknown	unknown	gnl\|CDD\|235306
CP012670.1\|AUX19640.1\|120791_121316_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|225996
CP012670.1\|AUX19643.1\|123379_124105_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX19651.1\|132289_136363_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372665

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX19637.1\|114308_115712_-\|uncharacterized-protein	gnl\|CDD\|377630	pfam06224, HTH_42, Winged helix DNA-binding domain. This family contains two copies of a winged helix domain.	3.27031e-58
CP012670.1\|AUX19649.1\|130528_131122_-\|hypothetical-protein	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	6.10423e-29
CP012670.1\|AUX19640.1\|120791_121316_-\|uncharacterized-protein	gnl\|CDD\|225996	COG3465, COG3465, Uncharacterized conserved protein [Function unknown].	0.000486229
CP012670.1\|AUX19641.1\|121341_122739_-\|uncharacterized-protein	gnl\|CDD\|224004	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only].	1.27402e-73
CP012670.1\|AUX19634.1\|111332_112331_-\|acetylornithine-carbamoyltransferase	gnl\|CDD\|235304	PRK04523, PRK04523, N-acetylornithine carbamoyltransferase; Reviewed.	0
CP012670.1\|AUX19648.1\|129814_130471_+\|hypothetical-protein	gnl\|CDD\|153097	cd00657, Ferritin_like, Ferritin-like superfamily of diiron-containing four-helix-bundle proteins. Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterioferritin, ferritin, rubrerythrin, aromatic and alkene monooxygenase hydroxylases (AAMH), ribonucleotide reductase R2 (RNRR2), acyl-ACP-desaturases (Acyl_ACP_Desat), manganese (Mn) catalases, demethoxyubiquinone hydroxylases (DMQH), DNA protecting proteins (DPS), and ubiquinol oxidases (AOX), and the aerobic cyclase system, Fe-containing subunit (ACSF).	5.69554e-07
CP012670.1\|AUX19635.1\|112549_112894_-\|uncharacterized-protein	gnl\|CDD\|239091	cd02407, PTH2_family, Peptidyl-tRNA hydrolase, type 2 (PTH2)_like . Peptidyl-tRNA hydrolase activity releases tRNA from the premature translation termination product peptidyl-tRNA. Two structurally different enzymes have been reported to encode such activity, Pth present in bacteria and eukaryotes and Pth2 present in archaea and eukaryotes.	5.71157e-19
CP012670.1\|AUX19639.1\|116840_120650_-\|ATP-dependent-deoxyribonuclease-subunit-A	gnl\|CDD\|224000	COG1074, RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair].	1.38283e-85
CP012670.1\|AUX19644.1\|124101_125010_+\|1,4-dihydroxy-2-naphthoate-octaprenyltransferase	gnl\|CDD\|260125	cd13962, PT_UbiA_UBIAD1, 1,4-Dihydroxy-2-naphthoate octaprenyltransferase. Human UBIAD1 is an enzyme involved in the synthesis of MK-4. Menaquinones (MKs, also called bacterial forms) are one of the two forms of natural vitamin K, the other being the plant form, phylloquinone (PK). All forms of vitamin K have a 2-methyl-1,4-naphthoquinone (menadione; K3) ring structure in common. At the 3-position of the ring, PK has a phytyl side chain while MKs have several repeating prenyl units. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways.	5.22985e-37
CP012670.1\|AUX19647.1\|128400_129702_+\|sodium:proton-antiporter	gnl\|CDD\|223104	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism].	7.00378e-64
CP012670.1\|AUX19632.1\|107909_109730_-\|porin	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	1.57343e-43
CP012670.1\|AUX19633.1\|109986_111333_-\|acetylglutamate-kinase	gnl\|CDD\|235306	PRK04531, PRK04531, acetylglutamate kinase; Provisional.	0
CP012670.1\|AUX19651.1\|132289_136363_-\|hypothetical-protein	gnl\|CDD\|372665	pfam13665, DUF4150, Domain of unknown function (DUF4150).	6.7773e-29

>CP012670.1|AUX19641.1|121341_122739_-|uncharacterized-protein
MPSGPERLRRPYIFRDPVHGDVAFARDGFGELVRKLVDEEIFQRLRGIKQNGVLNLVFPGAEHSRFAHSLGAAHVAARMYDAACQNSGHPADAAERQLTTLAALLHDAGHGPFSHLLEEILGKNHFHHEALTGRILTDHSSPIAARLREHDKDLPETILPFIDYKKRKYRRWYHGLVSSQLDADRLDYTARDAMMCGIVSHRFDRDRLVGALYIWKRPIRAGEPEERAPDEYLAVDDRARDVVESYLHALYHLYQSIYLHRAARAASWLLNAALRRARDLATSDPAQRNRLFPAGDMRDPLWALIEDGSKVPLVDYMRLDEAHVWGLVQRWRDTDDPTLRDLCERLKRRRLLKAIDVSTSDYEKLTKLQDEARSRVKKALPDLDPRYYVHLDQIGRENYKPYRWGREDSGADPILLISKQGAARPLEEEARGKSMLDLLESRFMMQRLIVPEEVREHLPPDLLKD
>CP012670.1|AUX19640.1|120791_121316_-|uncharacterized-protein
MSTTFQDQLGLASVLALLVTKTEKLSGRLRIQKLMYLLRQKGAKPLQPFYFDYHHYGPFSAEVADAIKGAVRSKLIAEHEESDEDWKRYEYTPDARTAQYAARVDESTRALVDQVLAVCGKAHWRTLELAATIDFLQRTDRLDREAATREALERKPQCSRHEADARRLLDALGL
>CP012670.1|AUX19639.1|116840_120650_-|ATP-dependent-deoxyribonuclease-subunit-A
MTAGTARTRGGRELADEPARRRIREDLRTTLLVEAAAGTGKTTALVSRIVAVLRKAPEEGGGTLDRIVAVTFTEKAAGEMKLRLRAEIERARSDPRSGPAERGRLDEALAHLEAARIGTIHSFCADLLREWPVEARVDPLFQVAAADQAEALFDQAFDAWFQRTLNDPPEGVRRLLRRRPRDGAQGPRDLLRGAAYRLAEHRDFTRPWRRDPFDRERALDELLDRLAALAELGAEADREGDYLAQSLRNLDRYLAELRRREEVTGGRDHDGLEAELCDVARWKEWRWRGAGKAFGADLSRAEVLAQRDRVKAELDAVLTAANADLAACLSRELRPPIEAYDALKARAGKLDFLDLLLCARDLLRSSRGVREELCRRFSHLFVDEFQDTDPLQAEILLLLAADDPAETDWTRARPVPGKLFVVGDPKQSIYRFRRAEVALYEATKARLVACGASVLYLSTSFRSAPSIQAAVNAAFAPLMRGGGGEAARGGEAARGGEAARGGEAARAASQARYVALEPFRDEPADQPTVIALPVPRPYADYGRISDFRVRQSIPDAVGAFVHHLIHAGQGGLPGRRWRVTERERPDQRVSLEARHICLLFKRFQTFGEDATRPYVRALEARRIPHVLVGGRSFHDREEVMAVRSALLAIEWPDDELSVYAALRGPLFALTDDALLLYRDRFQRLHPLVQPADDGALDLEVEGGARPLREVAEALAVLGRLHRERNRRPIADTIGALLDETRAHAGIAIWPTGEQALANVLRVMDLGRRFEAGGATSFRAFVERLEVDAERGEAAEAPVVEEGTEGVRIMTVHRAKGLEFPVVILADPASPAVHQQPSRHVDPELNLWAEPLAGCVPAELVERRDEVLRRDREEAVRLAYVAATRARELLVVPAVGDARPGDGSSDGWLDVLHPVLYPAQGARRSARSAEHLGCPRFGTDTVLERPARCEADERDAVAPGEHTPMAGTHRVVWWDPDALELDREPEAGLRQQRILQADTGGAAAAAGGAAAAAAERGHDGQRGHEAWREARQQAIRSGSVAAFRVKTATELSHEAAAEAAAAEAAAAAEVTETPAAGAPGAAGAVAGPGRREGGAARGERPDALPVISFAQTAVAREGRPYGRRFGTLVHAVLAEVDLRAGEDEVRAMATAQARLLGAPAEEIDAAVVAALAALEHPLLRRAAESAAQGACERETPLLLRLPDGTIAEGVVDLSFRERVGDVGIWTVVDFKTGADTGAVARAAQETQVRLYVEAIAAATGERARGVVLRV
>CP012670.1|AUX19638.1|115798_116662_-|hypothetical-protein
MDWKESYRARLREHLDPHGDIVPPWERFPDYERHTAGWRMGAGEDWMGLWSVFLDQLPPDPETRIAYLRRHPPAPINWADAVHDVLVPAERGDGGRDEEDDDEDDLVEVDRAVAAQRRAALLEQGLIASDVAFTTWLGQQNGVRWPWEGDPTPEDAARYGTRALWFWSRQIAELRKDRGWTPPAVPEGWRACAHALESGDAGPVDPRLGLLSLARLLCAGHVKAPWQLGLDLTDFADSFDNDMGYVDAFRLWGMAAFDDAQQLRRYLDATRMPPGWEAWIADQFLVD
>CP012670.1|AUX19637.1|114308_115712_-|uncharacterized-protein
MPTTTLTRRELNRATLARQMLLSRERTTAVHGIERLVALQAQLARPPFLGLWSRLVGFRREELVQRALRREVVRAPFLRGTLHLVSAKDYLALRPVIAPVLHAAMRSTLGARAEALDVDRLVAEARAYFDEEPRTMDALRAHLAAIHPEGDVRAMALAVRMRLPVIQVPTATPWGYPGTADFAPAASWLGQPLCEGDAPQALVLRYLAAFGPATAADVRTWSGLTGVKDVLQSLREQLCTFRDERGRELFDLPDAPRPPADTPAPARFLPDYDNLLLGHDDRTRVIADEHRARIVLSANLRILPTFLVDGLVAGTWAIERKKASATLVIEPFAALSREAREQLAEEGDALLRFVEDDAGAFAVRFEKAGSAKAPAAARANGGETAKAPAARASGGKATKAPAARASGGEATKAPAARASGGKATKAPAARASGGEATKAPAARASGGEATKAPAARVSDGKAARARR
>CP012670.1|AUX19636.1|113195_113756_+|uncharacterized-protein
MATADLPAERGNVDGREEVLEGGGTTVVTRVGQTVRRPLRPWSAAVHRLLEHLRAAGFAGAPRFLGTDGVREILDYIEGEVGNYPLPEQARGERALASAARLMRSYHDATVALADQRPDGWQLPPIEPVEVVCHGDFAPYNCVVCARIEHPEGPGGGAWGRVEHPEGLGGGAWGRVEHPEGLGGGA
>CP012670.1|AUX19635.1|112549_112894_-|uncharacterized-protein
MDPIVQYLILSRELLALGHGVLAAQAAHAAVAGYLIAANSDSARAWAGGTFTKILLAADDEAALRAVSAQLASAGIAHKLLEESRLQGKATAIGVAPLPRSTVAPVLGRLPLLR
>CP012670.1|AUX19634.1|111332_112331_-|acetylornithine-carbamoyltransferase
MRHFLTTMDYTRAELEGLLERAQRFKRRPIEPRLKDRTLALVFFNPSLRTRTSFDVGIRELGGHAIALEPGRSAWPIEFEDGAVMDGEPEEHVQEAARVLSRYADLIGVRAFPKFQRWEEDRQDRVLNAFARHATVPVINLETITHPCQELALALAMKERLGRLDGKKLLLTWTYHPRPLNTAVANSAVLIASKLGMDVTLLCPSEEYHLDDRYLDAARKSTAENGRRFSITYDIESAYRGADVVYAKSWGAIPYFGRWEQEKPIRDRYKHFIVDEQKMALTPGALFSHCLPVRRNVKVTDAVIDSPRSMVIDEAENRLHVQKAIMDMLVNG
>CP012670.1|AUX19633.1|109986_111333_-|acetylglutamate-kinase
MSAMSSSTQDVIVRLLRNLGSRKEVEQYLKQYAAVDQQKFAVIKVGGAILDEDLEALATSLVFLNQVGLYPIVIHGAGPQLDRALAESGIPSERINGLRVTTPRILEVARRVFLRENLRLVEALEEMGTRTRPITAGVFEASLVDEERLGLVGRIQRVHLDAVRSSIRAGHLPILACLGETPGGQIVNINADVAARELALATQPFKMIFLTSAGGLLDEHGRIVSAINLEEDFAGLVSQPWLSAAMRLKLQEIKLLLDGLPATSSVSITSPDHLAKELFTHTGSGTLIRRGERILRHDTLDGIDRDRLRGLLEACFQRALDPSYFEKKRFYRIYLSDSYRATAILTLDSSGKGPSIPYLDKFAVTTEAQGVGIGGSLWTRMKNENPALFWRARNGNEVNPWYFQQAEGSYRNDTWTVFWYGLPGFDDIHACIDHALSLPATLRQHGTA
>CP012670.1|AUX19632.1|107909_109730_-|porin
MQARRLGTYPTAVLAATLCLVGAAARAQAQDAAAPEGFALDRFQPAPAGDRMFGVQSAYTAGETSPHIMLLGDYAQDPLVLRTRSGNEDRGAIVGNQLLLHLGASLALWNRLTVSADLPLALQSGDGGAASGAQLAPPTTSALGDLRLGARATLYGGYHDPFQLAVAGYVWLPTGDPEAYSGDGAVRGAPQLVLGGHLGSAVWSFSAGPEFRAKKPFANVESGMMVQWGAGLGLLLDDERRLQLGPEITGAIAVTDLQRRTTNLEALLGGRYRVASDFEAGLGVGPGFTSGIGTPSFRAVAMLAYTPEVKPPVKDRDRDGIADEVDACPGVPGVGSADPRQNGCPPPPKDSDRDGFADPVDACPDAPGVADPDPRKNGCPPPGDSDGDGIVDPVDACPDVPGVAAPDPKQNGCPPPDRDGDKVPDAEDACPDLPGLVTTEPATNGCPGDTDGDGLRDDQDACPNEKGKPNADPKQNGCPVAVRVTETEIVILQQVQFAFGKATIKKESDELLDEVAGVLNDHPEIRQVEVQGHTDNRGTRQFNTRLSQARAESVVEALVARGIAPERMVAKGYGPDVPLADNKTEAGRQQNRRVQFNITEKAKKQP
>CP012670.1|AUX19642.1|123088_123232_-|uncharacterized-protein
MPGTPAETTSRKQAPGHMYRPKAFTSCSPPAIKKHYEGRVGHRPRRA
>CP012670.1|AUX19643.1|123379_124105_+|hypothetical-protein
MTGIPDDERAALARLTPLLGARASVAPGRPQAPTPLELLEQVAGDSEDEARGRAFARALGDMIVAVLDNFPDNIFWDLDYLACCLWQAGSAPAIRDLARRVVSLCQGFGNKSTLRFRYAHDFLYGYDWARWVTRKPEERAGVGPFDPAFLDHLDGRQAALLELVARNDRKYAPLRGREFRNPFPFNREPREETQLHHLLAQVDLIPLKAWRLDGERRWDLPFTDLRAQLAERLGLSRGEGR
>CP012670.1|AUX19644.1|124101_125010_+|1,4-dihydroxy-2-naphthoate-octaprenyltransferase
MSRAPGGLRAWIQASRLPSQAYIAPPLLLGQLAFARTSGRRIDLETLAAVQLFGVLDQLFIVYANDVADQETDRRNRTATLFSGGSRVLVERRLSPRALSAAALACAAGLVAVSAGLAAARGAPLLVVLALAAILLLAAYSHPPLRLSYRGGGELLQMVGVGGVLPLYGYLAQGGAIERFPWALLAFLLPTHLGCAIATALPDEPSDRASQKRTLPVRVGGERAAWCVALLNGLSLLLAPAGLGALGLRPGPGLLVTAAAALVVPLARPAPPGSRRMLIRVGAAVTATLALVGSTALDLAAR
>CP012670.1|AUX19645.1|125023_125755_+|hypothetical-protein
MTHAFLLLSLLFLVPGAVIWRARPDLRPLMRRMAVVSLPFATTERLFYPRYWTPKFLFDLADHIGFGVEDVLFLVGLSAFSSTAYAVVFRRAPVPCAGPRARPWPRAAAGVALALLAAGALLAAGVPVLYASAAAMVAIAAALVVARPDLLVPGLLGALLSAALYLGLFLVFGALVPGVFERTWRPSVLLPGRTLLGVPLDEILYGLGAGFAATVFPAWAFGFRFEEAPRAGRPRGRAPRGTG
>CP012670.1|AUX19646.1|125820_127368_-|uncharacterized-protein
MRFTLFSSLVSRSSAARASLQGFLALSALVVLTGAKGQGCGTVVEPPPPPEPDCGPGYHWEKVCSPCEVGVMCEEQCVPDHACPAGWSQYISCDGTSGSTTAAVGGMGASGPGGPLPVPPGCRSECVPPPPVCPPGTELQTFCGGTSSVVTTVAGTGGWGPADTSGSVVTVGGWGEGGAGGGAMPYPGDCWNECVPVGPYCPPGTEPQTVCGTGVTSVATTAVTGTTTGGWDPGPGDWGQGGAAGAGGAYGGSGSTPIGDGCWTECVPVGPYCPPGTEPRSVCEGGSVGSSGTGYYGSSSSTGYYGSTSSSTGYYGSTSSSTGYYGGAGGAYPGDGCWTDCVPVEPHCPPGTEPQSVCEDGSAASTGPGYGGAGGAYPGGGCWTDCVPVEPYCPPNTIPQTTCEGGGVGSGGSGEYFPDDPYCWTDCLPIGLECPRGTTEQVVCYEGTTTSTGTSTGTGVGGMPFPEYPYCQSECVPVEDECPPDLIERRICEERNTSDGGTEMACWTECVLMLP
>CP012670.1|AUX19647.1|128400_129702_+|sodium:proton-antiporter
MDLFQVSAALLSLAAVFSYFNHRFLKLPTTIGLMLIAMTTSLAMVAVGELFPTVEAEAKEHLSGIDFNKTLMQGMLGFLLFAAALHVNLADLKKQRLVIGVLATGGVLMSTALVGGMTYAVMTLMGVEIRPIYCMLFGALISPTDPIAVLGILKHVGAPKELEMKIAGESLFNDGVAVVAFLGLLEIASGTAGFDIQRLSLLFVQEAIGGAVFGFALGFVALAMLRKVDDYKVEVLISLATAAGGYALAYAIHVSGPIAMVVAGLFIGNEARAGAMSEKTREHLDDFWELMDEILNAVLFVLIGLELLIISFSGQSVLAGLLAFPVVLLARFIAVALPVSLMKRRRVFTPGAIRILTWGGLRGGVSVALALSLPARLADGALVPEREIVLSITYVVVVVSIVLQGLTIGPLLRRTIAAAVAPEPEDQLPAGAA
>CP012670.1|AUX19648.1|129814_130471_+|hypothetical-protein
MNAEEFLDELDRRVGERLARIGAAAGAAEPRDGVGIPELLSTALKKELEATEEAALWLTTETDVEVKLALARQCGDEARHYRLIAERLRALGVDPAAIPARFGPPTPMFGYLKGLGSTVERVAAGQFTREALAKVHNQAFIEYCEAQGDAETARLYRDVIQPDEGHHHEMGRRLLARLAITEEAQALARAAAMRTLEIAEELQEIARIKMGVCRAPGC
>CP012670.1|AUX19649.1|130528_131122_-|hypothetical-protein
MPTAAQKPSPATAADLLAIPEEQRFHEIVDGALVQKAVSSFEHGDAQSAIVAHVKIPFQRRPGGRWPGGWWFATEVEVELMPDQVYRPDVVGWRRERSPERPSGSPVRLRPDWVCEVLSPDNARNDTVKKMRVYHRCRLPHYWIVDPREETLTVHRWTPEGYLVALRAERGERVRAEPFDAIALQVGVLFGDEPEDA
>CP012670.1|AUX19650.1|131261_132275_-|uncharacterized-protein
MPSVCASLSTPLLSPREDLVFCAAFALAWERLRARFGPIRMDPQPALADALNATALGAEVVDPAWSVAGAGFGGEGIVEALRAELLAKVPGARPEYLPEAVPPDALLAYGFLDKVLRFETTFAVREGTFKRARVRAFGLDGNPFGADPARRAQVVVHDWTAPQDFVLELLADDPDSRVLVAQIPPAETLAAAVERALGRLDRLDGAARRLAPDEALLIPRLGLDLEGRFGELVGRPLLGERVRGKRFDEAKQRVRFHLNEGGAGASAEAVMGSYGPPPRRSFLVTEPFLVLLQRRAANAPYLAAWVESTAWMEVLGQVAPPAPAGWGAPAGWGPPAG
>CP012670.1|AUX19651.1|132289_136363_-|hypothetical-protein
MGKVTALMMDTITEKSGHQMTGMAVSVCLTPAAPSPVPIPYPTMGTVAEGIIDPCMRTKIEGAKILTVGGCMKACHGNEPGTLKEVVSLNTAGPCFPWLGAPNVFIELGMAGITGSMGQMNKAITVGAGASASGAGGGGGGGGGAGGGAGGPGGAGPQGAGNGGGGGGGSNQGAGPPSPPAAPGADGQASAGHPVDVITGAVFTPPETDFSLPGVLPVAWTRHYRTSSVLGECGIGRGWSHSLCWQAEIRGDRLTLIDETLRATTFAVPAGDVQLLLPFGRRVYWEADALVVDLDDGVLRVLTRGHAPGWYRLTQLRDRAGNSAEITWNDREVVQIVDSVGRRAWLEREGPYRSWWVAATGADGAEHRKRLVTYELDEKNDLVRAIDAGGVETRYVYDDEHYLVLEQQPGGLRYHFVYADVSGERRCVETWGDLEDADILEAIGAPEASMSGRPRGLFHMRFQYGPAPHETTVIDGLGHRFRYKGNALGLVEQYEDPRGQHKHLAYSATGQIIRSTTADGSERSAYDAAGRLVSFTDAMGRSFGLTRRDDGAILEVRDPAGARYTFAVDERGQVLERADPLGAKTRYQYDERGRVLAVVAPDGAAETFEYDAHGNLIARTLPRGGTARYTYDLFGQLVRAEMPAGAVYELDYDSRGLPVRVRAPGGVVVEAQFNGARRRVSMRHPGGGVSSARYVGHLVVEEVQPDGSRYRFGYDARGRLAWVKNPAGESLTIERDACGLVIRTRTFSGVETRYEHDVRGRVVRAEVAGSTVRKIAYSRCGEVIRREDGDLVTTLEYDDRGLVRRGVRGATEVLLERDAAGRIVREEQRVGGWRYLVDRAFDAKGWVTARRYSTGWQVQLGRGPSSDVTSISLESAAGVERILREVDALGKETARVRERGYAIRTRRDPLGRPLATTLEDAAGTPVRERWYTWSKTGPLAQVVDSAAGKRTYELDLFGRPLSVQGLGAEEQLRYDPSGTPLRSVEDRTGPGGRVLRTAAAAYTWDAQGRLASRQAEGRLESWTYEYDGLDALARATRGDGLAVHYHVDAFNRRLGEVRSDGSSRWYGWDDQVQVEELGSDGASVRRVFADDEITPLLEGSAAGGWRSVVSDAAATPWLMVDATGAAVAQDLGAFGAVVRSEGPFTAIRFAGQRHDALTGLTYHRARDYAAELGTFTSPDPLWLEASALELAFVPNVTLWVDPLGLVVLLMSDDPTCVNGANARAAATGQRIVHFSQLGNPSALAGERDLYIYGHGSPGQLHYADPSGRFTGATMNGQQLGSSIRGAGFTGSNIHMTVCHGGTDPPGQPGGSTAQAVANATGATTVACVGDSMYDHPTIPGVTIAGPAGTMQPFTRRP

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Crispr_ID: CP012670_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_3

399559-401139

Unclear

Consensus_repeat	Method
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	PILER-CR
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CRISPRCasFinder
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CRT

21 spacers

cas2,cas1,cas3,cas8u1,cas7,csb2gr5

The CRISPR arrays of CP012670_3

>merge|CP012670|3|399559-401139|PILER-CR,CRISPRCasFinder,CRT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCTTCACGCGCGGCGCGACCTTCGACGCGGAGGGCGGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGGTTTCCCCGGCTGTTAACCACGGGCCCCCCTGGTTTCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCTGGTATCCGTCATCGCCAACCTGGCGACCACGGACGCGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCATCGTTGCCTCCATGTCCACAACCTAGCACGCGTGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCCGGCCTCGTGTGCGAGGGGATCGCGGCGTACGAGGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCTGACGAGCCCTCGTGGCCGATCCTGACGGGGCCGCCCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCTTCCGGTCGCCGGAAGAATTCTTCTGGTGGGTCATCGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCCGCTCCTCCTCTCACGCCCACAGCCAACCCACCTTCACTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCTGGGTAGGAGGTGAACATGATCTTCGATGTGGGAAAGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCTGGGTGTAGTCGCCCGGGATTGAGCGCAACGCCGCGGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGGCTGCGATGGCCCGCGCCGAACTCGCGCGGCGGGCATCCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCTAGAGCGTGCTGGGGTCGTAGGTGCGGTGAGTTTGAGACTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCGTGATCTCGATGCCAACGATGTACGCGCCCGCGGGCGCCTGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCAAGGAACGCTTGCATACCCAAGCGCCGCTCAGGATCCGACCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCAGAAAACCTCCGGCCAGCACCGCGACATGCAGCGCGACTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCCAGGCCAGATGTTGACATCTGACCCCATGTAGAACGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGACGCGGAGCCGGTACCCCACGGCCGCCAGCAGCCTGACTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGATGACGCCTTTCAGCGCGACAGCGGGGAAATCGACGTCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGCCTTCGGCGCCGGCTTCGCGCCGCACGCGCAGAGGCCCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGTTGCCCTATCGTCGTCGTCGGCCATGCGGCTCGCTCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGGAGGATCACGATGGCTACACGGATTGTGGCGCTGTCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC

>CP012670|3|1|399559-401139|PILER-CR
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TTCACGCGCGGCGCGACCTTCGACGCGGAGGGCGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGTTTCCCCGGCTGTTAACCACGGGCCCCCCTGGTTT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTGGTATCCGTCATCGCCAACCTGGCGACCACGGACGCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ATCGTTGCCTCCATGTCCACAACCTAGCACGCGTG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGGCCTCGTGTGCGAGGGGATCGCGGCGTACGAGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TGACGAGCCCTCGTGGCCGATCCTGACGGGGCCGCC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTTCCGGTCGCCGGAAGAATTCTTCTGGTGGGTCATCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGCTCCTCCTCTCACGCCCACAGCCAACCCACCTTCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTGGGTAGGAGGTGAACATGATCTTCGATGTGGGAAAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TGGGTGTAGTCGCCCGGGATTGAGCGCAACGCCGCGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGCTGCGATGGCCCGCGCCGAACTCGCGCGGCGGGCATC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TAGAGCGTGCTGGGGTCGTAGGTGCGGTGAGTTTGAGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CGTGATCTCGATGCCAACGATGTACGCGCCCGCGGGCGCCTG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AAGGAACGCTTGCATACCCAAGCGCCGCTCAGGATCCGAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CAGAAAACCTCCGGCCAGCACCGCGACATGCAGCGCGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCAGGCCAGATGTTGACATCTGACCCCATGTAGAACG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GACGCGGAGCCGGTACCCCACGGCCGCCAGCAGCCTGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GATGACGCCTTTCAGCGCGACAGCGGGGAAATCGACGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GCCTTCGGCGCCGGCTTCGCGCCGCACGCGCAGAGGCC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTTGCCCTATCGTCGTCGTCGGCCATGCGGCTCGCT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGAGGATCACGATGGCTACACGGATTGTGGCGCTGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC

>CP012670|3|3|399559-401139|CRISPRCasFinder
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TTCACGCGCGGCGCGACCTTCGACGCGGAGGGCGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGTTTCCCCGGCTGTTAACCACGGGCCCCCCTGGTTT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTGGTATCCGTCATCGCCAACCTGGCGACCACGGACGCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ATCGTTGCCTCCATGTCCACAACCTAGCACGCGTG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGGCCTCGTGTGCGAGGGGATCGCGGCGTACGAGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TGACGAGCCCTCGTGGCCGATCCTGACGGGGCCGCC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTTCCGGTCGCCGGAAGAATTCTTCTGGTGGGTCATCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGCTCCTCCTCTCACGCCCACAGCCAACCCACCTTCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTGGGTAGGAGGTGAACATGATCTTCGATGTGGGAAAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TGGGTGTAGTCGCCCGGGATTGAGCGCAACGCCGCGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGCTGCGATGGCCCGCGCCGAACTCGCGCGGCGGGCATC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TAGAGCGTGCTGGGGTCGTAGGTGCGGTGAGTTTGAGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CGTGATCTCGATGCCAACGATGTACGCGCCCGCGGGCGCCTG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AAGGAACGCTTGCATACCCAAGCGCCGCTCAGGATCCGAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CAGAAAACCTCCGGCCAGCACCGCGACATGCAGCGCGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCAGGCCAGATGTTGACATCTGACCCCATGTAGAACG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GACGCGGAGCCGGTACCCCACGGCCGCCAGCAGCCTGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GATGACGCCTTTCAGCGCGACAGCGGGGAAATCGACGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GCCTTCGGCGCCGGCTTCGCGCCGCACGCGCAGAGGCC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTTGCCCTATCGTCGTCGTCGGCCATGCGGCTCGCT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGAGGATCACGATGGCTACACGGATTGTGGCGCTGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC

>CP012670|3|1|399559-401139|CRT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TTCACGCGCGGCGCGACCTTCGACGCGGAGGGCGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGTTTCCCCGGCTGTTAACCACGGGCCCCCCTGGTTT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTGGTATCCGTCATCGCCAACCTGGCGACCACGGACGCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ATCGTTGCCTCCATGTCCACAACCTAGCACGCGTG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGGCCTCGTGTGCGAGGGGATCGCGGCGTACGAGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TGACGAGCCCTCGTGGCCGATCCTGACGGGGCCGCC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTTCCGGTCGCCGGAAGAATTCTTCTGGTGGGTCATCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGCTCCTCCTCTCACGCCCACAGCCAACCCACCTTCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTGGGTAGGAGGTGAACATGATCTTCGATGTGGGAAAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TGGGTGTAGTCGCCCGGGATTGAGCGCAACGCCGCGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGCTGCGATGGCCCGCGCCGAACTCGCGCGGCGGGCATC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TAGAGCGTGCTGGGGTCGTAGGTGCGGTGAGTTTGAGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CGTGATCTCGATGCCAACGATGTACGCGCCCGCGGGCGCCTG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AAGGAACGCTTGCATACCCAAGCGCCGCTCAGGATCCGAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CAGAAAACCTCCGGCCAGCACCGCGACATGCAGCGCGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCAGGCCAGATGTTGACATCTGACCCCATGTAGAACG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GACGCGGAGCCGGTACCCCACGGCCGCCAGCAGCCTGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GATGACGCCTTTCAGCGCGACAGCGGGGAAATCGACGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GCCTTCGGCGCCGGCTTCGCGCCGCACGCGCAGAGGCC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTTGCCCTATCGTCGTCGTCGGCCATGCGGCTCGCT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGAGGATCACGATGGCTACACGGATTGTGGCGCTGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX19858.1\|398028_398850_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX19863.1\|405662_406655_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379276
CP012670.1\|AUX19850.1\|387376_387805_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376462
CP012670.1\|AUX19862.1\|405037_405655_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379235
CP012670.1\|AUX19857.1\|397662_397953_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|378256
CP012670.1\|AUX19852.1\|389706_390681_-\|CRISPR-associated-protein	cas7	cd09678_cas7_CAS-I-U	gnl\|CDD\|378223
CP012670.1\|AUX19859.1\|401353_402613_+\|transposase	unknown	unknown	gnl\|CDD\|376573
CP012670.1\|AUX19867.1\|409571_412643_-\|hypothetical-protein	cas3	cd09696_cas3_CAS-I-U	gnl\|CDD\|187827
CP012670.1\|AUX19853.1\|390683_392942_-\|hypothetical-protein	cas8u1	cd09767_cas8u1_CAS-I-U	gnl\|CDD\|274989
CP012670.1\|AUX19854.1\|392938_395584_-\|hypothetical-protein	cas3	cd09696_cas3_CAS-I-U	gnl\|CDD\|274235
CP012670.1\|AUX19864.1\|406651_407743_-\|molybdenum-cofactor-biosynthesis-protein-A	unknown	unknown	gnl\|CDD\|274250
CP012670.1\|AUX19855.1\|395693_396512_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX19851.1\|388021_389707_-\|CRISPR-associated-protein	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl\|CDD\|274005
CP012670.1\|AUX19860.1\|403436_403994_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|376573
CP012670.1\|AUX19849.1\|386683_387298_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368559
CP012670.1\|AUX19856.1\|396598_397537_+\|uncharacterized-protein	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274976
CP012670.1\|AUX19868.1\|412635_414327_-\|hypothetical-protein	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl\|CDD\|274005
CP012670.1\|AUX19865.1\|407739_408486_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223609
CP012670.1\|AUX19861.1\|404038_404392_-\|transposase	unknown	unknown	gnl\|CDD\|379129
CP012670.1\|AUX19866.1\|408636_409575_-\|hypothetical-protein	cas8u1	mkCas0114_cas8u1_CAS-I-U	unknown

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX19850.1\|387376_387805_-\|hypothetical-protein	gnl\|CDD\|376462	pfam01124, MAPEG, MAPEG family. This family is has been called MAPEG (Membrane Associated Proteins in Eicosanoid and Glutathione metabolism). It includes proteins such as Prostaglandin E synthase. This enzyme catalyzes the synthesis of PGE2 from PGH2 (produced by cyclooxygenase from arachidonic acid). Because of structural similarities in the active sites of FLAP, LTC4 synthase and PGE synthase, substrates for each enzyme can compete with one another and modulate synthetic activity.	3.0062e-14
CP012670.1\|AUX19863.1\|405662_406655_-\|hypothetical-protein	gnl\|CDD\|379276	pfam13578, Methyltransf_24, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.00974e-21
CP012670.1\|AUX19862.1\|405037_405655_-\|hypothetical-protein	gnl\|CDD\|379235	pfam13521, AAA_28, AAA domain.	2.48779e-29
CP012670.1\|AUX19857.1\|397662_397953_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	2.00229e-17
CP012670.1\|AUX19852.1\|389706_390681_-\|CRISPR-associated-protein	gnl\|CDD\|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	1.20216e-47
CP012670.1\|AUX19859.1\|401353_402613_+\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	8.38433e-06
CP012670.1\|AUX19867.1\|409571_412643_-\|hypothetical-protein	gnl\|CDD\|187827	cd09696, Cas3_I, CRISPR/Cas system-associated protein Cas3; Distinct Cas3 family with HD domain fused to C-termus of Helicase domain. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; DNA helicase Cas3; This protein includes both DEAH and HD motifs; signature gene for Type I.	7.95149e-87
CP012670.1\|AUX19853.1\|390683_392942_-\|hypothetical-protein	gnl\|CDD\|274989	TIGR04113, hypothetical_protein_AaLAA1DRAFT_1703, CRISPR-associated protein Csx17, subtype Dpsyc. Members of this protein family are found exclusively in CRISPR-associated (cas) type I system gene clusters of the Dpsyc subtype. Markers for that type include a variant form of cas3 (model TIGR02621) and the GSU0054-like protein family (model TIGR02165). This family occurs in less than half of known Dpsyc clusters.	0
CP012670.1\|AUX19854.1\|392938_395584_-\|hypothetical-protein	gnl\|CDD\|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	1.07335e-37
CP012670.1\|AUX19864.1\|406651_407743_-\|molybdenum-cofactor-biosynthesis-protein-A	gnl\|CDD\|274250	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial. The model for this family describes molybdenum cofactor biosynthesis protein A, or MoaA, as found in bacteria. It does not include the family of probable functional equivalent proteins from the archaea. MoaA works together with MoaC to synthesize precursor Z from guanine. [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	2.1335e-10
CP012670.1\|AUX19851.1\|388021_389707_-\|CRISPR-associated-protein	gnl\|CDD\|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	3.67182e-30
CP012670.1\|AUX19860.1\|403436_403994_-\|uncharacterized-protein	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	9.46684e-14
CP012670.1\|AUX19849.1\|386683_387298_-\|hypothetical-protein	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	1.98781e-11
CP012670.1\|AUX19856.1\|396598_397537_+\|uncharacterized-protein	gnl\|CDD\|274976	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes a clade of Cas1 limited to the CYANO subtype of CRISPR/Cas system and most often the type found there.	5.80662e-79
CP012670.1\|AUX19868.1\|412635_414327_-\|hypothetical-protein	gnl\|CDD\|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	4.12124e-44
CP012670.1\|AUX19865.1\|407739_408486_-\|hypothetical-protein	gnl\|CDD\|223609	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only].	1.23363e-07
CP012670.1\|AUX19861.1\|404038_404392_-\|transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	3.79406e-30

>CP012670.1|AUX19858.1|398028_398850_-|hypothetical-protein
MAKLTIGQKAERVLLLLLGLRKNKVAAALVAHGFSDDDLAEGWRLLQRVTRTRLGFVATAAATDSGLINELDAWENKWFPIASATLKRHAPEAHAFMFRNLGQTEGAAVLVSVGTFVERWEHLARSKEKGGPDAGGEEGRKILARRGLTKAVIDEARELLARAGKLESVAEVAPAAAGDHDFEEAERQLWDWYLEWSTIVQTAIKDRRLLRELGFRRASSSRSSADAAAADDEEAEEDTGGASHDDGAGAEPAADPGAFLTGARPAAAARAGR
>CP012670.1|AUX19857.1|397662_397953_+|CRISPR-associated-endonuclease-Cas2
MRQSYIVSYDVCDPKRLRKIFKAMRGYGDWLQLSVWQCALSRRELVEMRRDLGQIIDARIDQVLIIDIGPANGRGRGAITSLGRAYVPSEQVAIVV
>CP012670.1|AUX19856.1|396598_397537_+|uncharacterized-protein
MGKRKDAWAHRSCALRREPRTGPGGRDQVMHVDLRRATSDCHDLCRPSAALPRGRGVLRALAGLREGEAPLALAQLRGGQSFARGVVVSKIKNARTMLRRNHAAAEPAVLSELDQLARKAAEAPSLASLLGLEGTAARAYFGAFPGMLKGPDEVRGAFDLEGRNRRPPRDPVNALLSLAYALLAKDLAVTLGTVGLDPLLGFYHQPRFGRPALALDLMEELRPIVADSVVVAAINNGVIAPDDFQRHGDAVALRPAGRKKFLMAYERRMDQLVTHPVFGYRISYRRVLEVQARLLARVLLGEVGAYPSFRTR
>CP012670.1|AUX19855.1|395693_396512_-|uncharacterized-protein
MPATGYTAIVDGHRVDILRDGVIVATGRWTGQRIEQSAACLVQDEIEDPDEALEASDAIYAKLEEQLAAEEAAALAAPAYDEQGVDLTLIDWVLDMTPRERLEMIESYAGVPFGRILEVLEDHEVEFIVIGGVAASLQGADWNTKDLDILYSRDAGNIRRLLDALSVLEARFRDLTGRRVVPTESHLLTHGPKLLLTKFGPLDLLGTLSMHDDETTYQSLVDQTATLETPRLSIRVLTLEGLIEVKKRAARPQDLRTLPILQAALERSRQRG
>CP012670.1|AUX19854.1|392938_395584_-|hypothetical-protein
MISAPPYATWFHTVARVAPYEWQRAVGESSACGYRLLRIPTGFGKTAGVVLPWLYHRALREDLAWPTRLVFCFPMRTLVEQTETAIAEWIERSRLSVSVHVLMGGVEAQRWELSPEQPAILLGTQDMLLSRAMNRGYGMGRARWPMPFGLVSQDALWVLDEVQLMDVGLATSAQLAAFRDHDAAARRTLRPTYAWWMSATLQPRWLTTVDFGAQVPPLAEQAVRIPEAERTGGLWEVRKTITLSDAVAELDVAKLALERHRPGTLTLLVVNQVQRAVDLFQALEERCHERKGKTRVRRPGAPELRLVHSRFRGVERSQWRRDFLSRAASRPEALPSEGRIVVATQVVEAGVDISARLLITDLAPWSSLVQRFGRCARYEGESGDIVVLGKTKTAAPYVEAELDAAADAAAALVRRAGDASPRAIDAFEDACDADQLGRLYVYAPAHLLRRRDLDELFDTTPDLTGSDLDVGRYIRSGEDRDVRVFWRPVDPASRTVSREHIGRVHRAELCPVPLRDLRDFARADRGGRPVFVLDYVLGAYRRVEEIERIPPGSTLLLPSSAGGYTDELGWNPKASAEVVPFAAPAEPADSAALRLDLSAEAAEDDSLSRAAWKSIATHGRETAETLRDVANALRLPERITALLDLAARWHDAGKAHATFQDAIAQDARARAGELGLRRDLAKAPDAAWSGKGYPSRPGFRHELASTLALLALLRRANPGHPALLGGCAELLAALGEPPSSASADDAIDSDHPLARELAELSAEELDLVAFLVCAHHGKVRTAWTSTPLDQRAGHGGIHGVRDGDVIDSLTLAARSGGSGDASVPSLTLSLEPAALGVGPRFGASWTERVAGLLEAWGPFALAYLEALLRAADARASMETTA
>CP012670.1|AUX19853.1|390683_392942_-|hypothetical-protein
MSLHLHHLAGCTPEPIAGYLKALGVLRAVASQADHRARARWNDGRFELVTSLDRDSLGRFFLEAYAPSPIIAPWNGGSGFYPKDTKDGIEPLSSSTTGRFAAYREAIAAGRAIVAARAESPKGEAKLEMIRACRRAWPESMLAWLDAAVVLTGEAARYPALLGTGGNDGRLDFTNNRMQRLVELLDPATGEPRSGARPLLAAALFGEPAPGLQRRAVGQFLPGNAGGPNQASSYLGESLVNPWDFVLLLEGALLLPVAAVRRLESGGLVQAAAPFAVRARAGGYASACAVDEGNQRGEQWMPLWNGAATLTEVRALFAEGRLVASAEKRQAIHAIDAARAVAGLGVARGVSEFVRFAYIERNGQANLAVPLGRWAVEAGEASERAGAPEHSRLLDEIDPWVEGLRSVGQGDSAPASLGRALRRVEAAMLAVCRQGSPERWQRLLLALAEAEEAIVARPKAAAAVAWLGPIPPLSPEWMRAADDGSTALRLAAAIASQTGPADRIGAEELGPIRAHCLPLDPRSGFRRLAVGEGGLARDPRVVWAGRDLADDLAAVAQRRMIEAALHGAHAFPLRGRAYAPLDDVALFLDGAVDEARVAGLSRALMAVDWKRAPRPPRQPRAARPSVLHALFRLAYTPDAVNGRPVGDRDGSTGSLSPLTPRLDPAPLRLLLAGRLHDAGAAAVRTLTAAGARPKLRVVAGAPELAHRLAATLAIPIAPEDLATLLRLICKPARPAVEDAPITPPPAAPTMPE
>CP012670.1|AUX19852.1|389706_390681_-|CRISPR-associated-protein
MSIDLSALLPDRAPYPSRLLLEQELRPVQGVRFQPTGFPDLGASLFEDPYENGGQRLLVESAQSMANRLEAVCWDRAAQDLIPELKGLSYVRVQRPDKSYLTSSITEAHRLNSPYILESKDKSFFNRLKDDTAPLAEGPIDRRKLAAIVFRYDASTLLHGLFLAKPDLVGGRLRIERALSSFIEAEDVSVAASGGVKNDAVNPSGDTGKGFGNVPFHRDEYTAKRITAFFNLDLHQIRGYGLGAAAERLLVLLGLFKIAALLEGDLRLRTACDLAPTGPLRVVRPESFPMPPVAALRAELPSAIAACKDLFAGSGAPTTVTFSS
>CP012670.1|AUX19851.1|388021_389707_-|CRISPR-associated-protein
MLRLAIRFLSGSYHATPWSRHVNEGDIEWPPSPWRLYRALLATGFARLGWTAVPPEGRTLIERLAASPPVYHMPPASTGHTRHYMPLYKNATAKVLDAFAFVGRDEGAVLGVTWEVEPTEAERALFAALADRLSYLGRAESWVAAEVTDALPETLSPCRASECAPGPEYERIALLAPLDAATYAAFRRDRVSTTPGARQEEPARRGAKAPKKGAMSREAAKLEALYPVDLLAALLKETGDLQREGWSQPPGSRWLSYWRERDALAKVSARAPRSAHERAPRADTALLALASDTTNGEVLPRLVDGLLRMEVLHAALVRRSDRGDGLGPSPCLTGKDARGEPRRGHGHAWLLPASLERNEQLDHVLVHAAMKLDERAYEALSSVRVFYWNNVPRTFVTLVGLGVREDFEQAVPYVRAATVWKSVLPFVPPRHLKRQGANSLEGQVQAELASRNLPPAERIEVEIDGGDYRAASDFWDLWQRRHPGQIHLAAHGGEEDRALRPEERLATRWRHFRSARLLKPEQRPPVVASLGLRLTFAKPVRGPIALGYASHFGLGVMAPER
>CP012670.1|AUX19850.1|387376_387805_-|hypothetical-protein
MPPTFKIWVASLLVLYFKMHFNSAMQKRGRVAAGGYPRPEDAAMFGLAHKDDTGLAWRAGRCWQNDLENIPLYLFVSLAYVLAGGPELWAYVLFGAFTAARVAHTACYLLSLQPWRLLCYATAHFAQLAILGFVVHRVFLAM
>CP012670.1|AUX19849.1|386683_387298_-|hypothetical-protein
MVAAAHAPLPSPTSAAPPDEQRFVLHDVPWQTYVALRDALDNPGLRMTYHEGTLELMSPSPEHEVAKTSIARLIELFALERDVPLCGYGSTTFRREAKARGLEPGECYCLGGPLKELPDIAIEVVLTRGGLDKLPVYSGLGVREVWFWERDGFHLHALRGEAYEPIATSELIPELDLDVLARFVRWPDQHGAAKAFRDWLRAGR
>CP012670.1|AUX19859.1|401353_402613_+|transposase
MRQSAGVDACTEGKAKGNLTTTRSEERSHSMRARRQLERVGLSASSIERFLHAAVKVDLHVKTVLSLSLATLGVLHSVSLCIHVIGRGMAWARDGSPKHATKQVDRLLSNNNVSPWLLFDAWVRFVVGPREELLVALDWTEFDVDDHATLALYLITRHGRATPLIWRTVKKSSLAGKRNDYEDEVIERLHEILPKATRVTLLADRGFGDQERYAHLGNLGWDYIIRFRECIIVTDADDTARPAGEWLTSTGRAKMLKNVRVTQDKTAIAAVVLVHDKRMKEPWCLATSRADLTASQVTKLYGRRFCIEETFRDVKNVHFGMGLSATHIGDTARRDRLLLIAAFAHVLLTLLGEAGERAGLDRLLKTNTVKHRTLSLYNQGCYWYTAIPNMREERLVQLMTAYGEVLREHAVTREILGTI
>CP012670.1|AUX19860.1|403436_403994_-|uncharacterized-protein
MKAGRQEDFPEILLPLFASSCEFPEKFEGMPQETGPNPTDRGRPGTKYHILVDQNGIPLAVEMTPANVHDSKMFTPMVDAVPTIARPCGRPRRRPKKLHADKAYDDPALRLACHLRHIVPRIARKGIESSEKLGRYRWVVERTIAWLRRFRRLTVRYERRADIHRAFLQLAVCLICLCHIQAGFC
>CP012670.1|AUX19861.1|404038_404392_-|transposase
MGKLLVPDELWERIEPLLPKAEPKPQGGRPRTPDRIALTGILFVLKTGIPWEYLPQELGCSGMTCWRRLRDWQQAGVWGQLHKALLDELGGADKINWERAALDASLVPAKRGVKRLA
>CP012670.1|AUX19862.1|405037_405655_-|hypothetical-protein
MSERVFKRLFVATGAYSCGKTTTLRHLASTRGYRVHGEAHRRVLDELGARTHGHPPDAPFHPIDAPEHVCPLCRKREFAARVLETQRTIEAEARDGDWLERGYLDPVEYYLRTSGEEEYPWPPGEPAFERYALVFLFAVMPELQAPRWGRSREERAAEAERINGRLGAMYRAAGFEVVDVAPGTVAERAELLASLSRTSDAAQHD
>CP012670.1|AUX19863.1|405662_406655_-|hypothetical-protein
MTPPIIPLPYIGRNLLFLEEALDELEARGITSPLLFRASEADKLARLLEHGTDRAGYPGERPWTDGPAQGRPIRHEDVIFATTADEIRRGEREPERSTSLKKFAVIARPLFVAYDARCFVKLCDRQYEYGDPARKPAALLALFPVTRVDPVQGWFSEEAGLAYRALVRSIHGGAMVEVGSWKGLSTAYVGRLAARRGVALHCVDAWEGSSDAYAARYSALLAAEDVPGAFEANMEALGLRPIVHRLASTDAAARFAEASLDLVFLDASHDAAAVLADLEAWWPRLKPGAILAGHDHNEEHAGVLEAVARFAARAGRAVEVGGGSVWWTRR
>CP012670.1|AUX19864.1|406651_407743_-|molybdenum-cofactor-biosynthesis-protein-A
MSARPFRDEWRRLKSRAFDLTGNSTAGATVRFDLWGRPVEVYRNANFSIYSRQPCNAKCHFCVEELRPASRGRSLAVQKTVEEDDGRYFDAMAESLDALRPLDPTVSITGGEPSHDPRLPRILALGQARRCRKRTLTTNGSGLLQQREGKRVIDWIVETGVQHLNISRAHPDHDTNARLMVMKDGLSVDELRRVVAAAAAGGTRVRLSCVLLQGQIDAVEPIVAYLRFARSLGVDNVIFRQLMKTDPAAVVENHVVKYSDRARVRLEPILDALSADARFSFERQIVGYYYYVEVFRFEDIDVVFEEADLAQLEETKRSGPGIVHELIFHPNARLASTWQPWDGILGPPTPPTTTTARAAQDAS
>CP012670.1|AUX19865.1|407739_408486_-|hypothetical-protein
MRTATRPQNATLTGTLPLDRPTAERPRRLYVATSNHCNRACPWCCTCSSPKGQTFLALDRYRASFPAEGPFEVQLEGGEPTIHPHFDEMVRLARVEPRCARVVVVTNGVELPREPAGLDAWLEKLGEPTTIKLSVNHHLLEHDGGLLDLARALRERLAALGGDRQLVLNVRLRKTEPDGDAWVAQAVRDAGLIELANVFHLQRYGFAQKREDWDEPFLVGTHFTMLNPDGGAFGPDLVARSDAMRRLP
>CP012670.1|AUX19866.1|408636_409575_-|hypothetical-protein
MTELLLTGLDGKNPLAFLSALGVLNALADRAKEGQPEPRLLWRAGGTYRPAIVGGPDRNALLDALVHDLESFRGEPAIERLRYRKDGNGAEAHDLKPPPGFFADYLSGLVREDRRRSLDFAAAFATDVAVDNNGNTKPTALHFTAGQQEFLGMVSELTQGVRVEDLEEALFGPWRYERPLPVLQWDNTSARDYALRASDPSKDKKLGVPGADWLAFRGLPFIRVAPVGDRIVTTGCSGEWKTGTFRWPIWTVPLPRSVIGSVLTSPELVEVDPSVLRARGIAIVLESAIRRSDQGGYGSFAPARMARPARGD
>CP012670.1|AUX19867.1|409571_412643_-|hypothetical-protein
MADLSLDDFAAYFDAVHGATAAPGGRATPFPWQERLLAEVARVGEWPALLDLPTGTGKTAAIDVAIFHLALDAASPPAQRKAPRRIVMVVDRRTIVDQAFERAKAIARALRGARDGVLRAVADRLRALADLREGEAPLALAQLRGGMPRDDAWAQRPDQPLVAVSTVDQVGSRLLFRGYGVSDVMRPIHAGLLGNDTLLLLDEVHLSRPFRDTLRSLRRYRTRASSKLPDRWHLVEMSATPGSPPAISGGTSATPATPDDERVFGLNDDDLRNERLAMRLRAKKPVVRHEVKVSGGEDARRAAFAEACADHALRFVAPGRAVGVIVNRVATAREAAAILRKRVGDSADVFLVTGRMRPLDRDDLDGKLGPLVRSGRVRSAAARPVVVVATQCIEAGADFDLDAIVTECASLDALRQRFGRLDRLGALELAPHDVRGVVLVRSDAMTKDHVDPVYGKALAETWTWIGEGTRDFGIQAIAAALPEGEALDAMLSPKSRAPVMLPAHLDLWVQTRPSPVIDPDVSLWLHGIDQRQAPEVQVVWRADVTEALLEQAMEDEETREALLKRVEACTPVGLEALSMPIHAVRAWLQGGTGPDLADVEGRTVGEDDRKPRIERLALAWKGDESRVINPRELHAGSTIVVPSTYGGLAEGTWDPSSHEPVSDLGDRARWQQTGRPTLRLHPELLRQHADVLDRAWPEAPVPVEEEGSDVEDREVVDAWLSQMSEAIDAWLSQSNAKATGASWLGGVVKALAEQGRKRPALLRLDGIARLGAGGGLERGYFALVGRVRAHAEGVGDVTTEDDGASHTGVEVTLREHLGGVAAWAERFAEQCGLPPEVVRDVELAARWHDAGKVDPRFQRMLHGGSELRAAVAAEPLAKSAIVAADRAARARARERSGYPRGARHELSSVALLEARPSLLDGAKDPDLVLHLVGSHHGWCRPLAPVVDDPEPVELAFDAGGTVVSVSSDHGVPRLDSGIAERFWRLVERYGWFGLAWLEAILRLADHRRSEEEQRGEIEARDER
>CP012670.1|AUX19868.1|412635_414327_-|hypothetical-protein
MLAFEVALLTGRYVATAVDDRGRAEWPPHPARLFSALVAAHFEALDRSEAERAALEWLERQGPPEITAPEAAAREVVTVFVPVNDTSVVGSLDDEALLVREARAALDAAREKGGKALAAAEKKLAKAEARFEDAVRKALARAPAGKEGKDGPARAASLLPERRTRQPRTFPSSAPAELGSAAPPLVFAWPSADPTPEQRATLDALAARVTRLGHSASLVSVRLRDDRPEATWIPDDVGRGRAGDEAVLRVVGPGQIEALCAAFELQADAPGRVMPASFQRYVRPRAAGEASAPAPRFGDGWIVLRRVAGPRLPSIRGVDVARTVRKAMMAAYGPGAPEILSGHRASGGPSERPHLAYVPLPFVGSEHADGAILGVALILPRDATREERLAVYRALDAWERQRREDDEERPRLPVHLGRAGELVLERLEEHALQSTLRPATWCAEAVSWASATPVALDRNPGDLGARDPRREAAAYAEAEETVATACERIGLPRPARVTVTPAAPLAGAEKARYFPPFQAGSPPLQRVLVHARLTFDAPVRGPILLGAGRYFGLGLFRPLREHG

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Crispr_ID: CP012670_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_5

404634-404960

Unclear

Consensus_repeat	Method
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	PILER-CR
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CRISPRCasFinder
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CRT

4 spacers

cas2,cas1,cas3,cas8u1,cas7,csb2gr5

The CRISPR arrays of CP012670_5

>merge|CP012670|5|404634-404960|PILER-CR,CRISPRCasFinder,CRT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCTCACGACACCCGTTGATAGTCGGTCGGGCATCGGGTCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGGAGGCCGGCTCTTCTGCGCCGCGCGCAGCATGACGGCCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCACCGTGTACGGCCGCTACCAGGCGGACATCCAGGACCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCTCCGCCGCCCCGACAAAACCCGTGTCCTGGCTGACGACTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC

>CP012670|5|3|404634-404960|PILER-CR
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCACGACACCCGTTGATAGTCGGTCGGGCATCGGGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGAGGCCGGCTCTTCTGCGCCGCGCGCAGCATGACGGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ACCGTGTACGGCCGCTACCAGGCGGACATCCAGGAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCCGCCGCCCCGACAAAACCCGTGTCCTGGCTGACGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC

>CP012670|5|5|404634-404960|CRISPRCasFinder
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCACGACACCCGTTGATAGTCGGTCGGGCATCGGGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGAGGCCGGCTCTTCTGCGCCGCGCGCAGCATGACGGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ACCGTGTACGGCCGCTACCAGGCGGACATCCAGGAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCCGCCGCCCCGACAAAACCCGTGTCCTGGCTGACGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC

>CP012670|5|3|404634-404960|CRT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCACGACACCCGTTGATAGTCGGTCGGGCATCGGGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGAGGCCGGCTCTTCTGCGCCGCGCGCAGCATGACGGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ACCGTGTACGGCCGCTACCAGGCGGACATCCAGGAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCCGCCGCCCCGACAAAACCCGTGTCCTGGCTGACGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX19870.1\|416301_418290_+\|CRISPR-associated-protein-Cas4	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187766
CP012670.1\|AUX19858.1\|398028_398850_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX19863.1\|405662_406655_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379276
CP012670.1\|AUX19868.1\|412635_414327_-\|hypothetical-protein	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl\|CDD\|274005
CP012670.1\|AUX19857.1\|397662_397953_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|378256
CP012670.1\|AUX19852.1\|389706_390681_-\|CRISPR-associated-protein	cas7	cd09678_cas7_CAS-I-U	gnl\|CDD\|378223
CP012670.1\|AUX19859.1\|401353_402613_+\|transposase	unknown	unknown	gnl\|CDD\|376573
CP012670.1\|AUX19867.1\|409571_412643_-\|hypothetical-protein	cas3	cd09696_cas3_CAS-I-U	gnl\|CDD\|187827
CP012670.1\|AUX19853.1\|390683_392942_-\|hypothetical-protein	cas8u1	cd09767_cas8u1_CAS-I-U	gnl\|CDD\|274989
CP012670.1\|AUX19854.1\|392938_395584_-\|hypothetical-protein	cas3	cd09696_cas3_CAS-I-U	gnl\|CDD\|274235
CP012670.1\|AUX19864.1\|406651_407743_-\|molybdenum-cofactor-biosynthesis-protein-A	unknown	unknown	gnl\|CDD\|274250
CP012670.1\|AUX19855.1\|395693_396512_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX19869.1\|414326_415604_-\|CRISPR-associated-protein	cas7	cd09738_cas7_CAS-I-U	gnl\|CDD\|378223
CP012670.1\|AUX19860.1\|403436_403994_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|376573
CP012670.1\|AUX19871.1\|418449_418740_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|378256
CP012670.1\|AUX19862.1\|405037_405655_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379235
CP012670.1\|AUX19856.1\|396598_397537_+\|uncharacterized-protein	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274976
CP012670.1\|AUX19865.1\|407739_408486_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223609
CP012670.1\|AUX19861.1\|404038_404392_-\|transposase	unknown	unknown	gnl\|CDD\|379129
CP012670.1\|AUX19866.1\|408636_409575_-\|hypothetical-protein	cas8u1	mkCas0114_cas8u1_CAS-I-U	unknown

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX19870.1\|416301_418290_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.28093e-116
CP012670.1\|AUX19852.1\|389706_390681_-\|CRISPR-associated-protein	gnl\|CDD\|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	1.20216e-47
CP012670.1\|AUX19868.1\|412635_414327_-\|hypothetical-protein	gnl\|CDD\|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	4.12124e-44
CP012670.1\|AUX19857.1\|397662_397953_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	2.00229e-17
CP012670.1\|AUX19863.1\|405662_406655_-\|hypothetical-protein	gnl\|CDD\|379276	pfam13578, Methyltransf_24, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.00974e-21
CP012670.1\|AUX19859.1\|401353_402613_+\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	8.38433e-06
CP012670.1\|AUX19867.1\|409571_412643_-\|hypothetical-protein	gnl\|CDD\|187827	cd09696, Cas3_I, CRISPR/Cas system-associated protein Cas3; Distinct Cas3 family with HD domain fused to C-termus of Helicase domain. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; DNA helicase Cas3; This protein includes both DEAH and HD motifs; signature gene for Type I.	7.95149e-87
CP012670.1\|AUX19853.1\|390683_392942_-\|hypothetical-protein	gnl\|CDD\|274989	TIGR04113, hypothetical_protein_AaLAA1DRAFT_1703, CRISPR-associated protein Csx17, subtype Dpsyc. Members of this protein family are found exclusively in CRISPR-associated (cas) type I system gene clusters of the Dpsyc subtype. Markers for that type include a variant form of cas3 (model TIGR02621) and the GSU0054-like protein family (model TIGR02165). This family occurs in less than half of known Dpsyc clusters.	0
CP012670.1\|AUX19854.1\|392938_395584_-\|hypothetical-protein	gnl\|CDD\|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	1.07335e-37
CP012670.1\|AUX19864.1\|406651_407743_-\|molybdenum-cofactor-biosynthesis-protein-A	gnl\|CDD\|274250	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial. The model for this family describes molybdenum cofactor biosynthesis protein A, or MoaA, as found in bacteria. It does not include the family of probable functional equivalent proteins from the archaea. MoaA works together with MoaC to synthesize precursor Z from guanine. [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	2.1335e-10
CP012670.1\|AUX19869.1\|414326_415604_-\|CRISPR-associated-protein	gnl\|CDD\|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	1.2315e-58
CP012670.1\|AUX19860.1\|403436_403994_-\|uncharacterized-protein	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	9.46684e-14
CP012670.1\|AUX19871.1\|418449_418740_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	2.00229e-17
CP012670.1\|AUX19862.1\|405037_405655_-\|hypothetical-protein	gnl\|CDD\|379235	pfam13521, AAA_28, AAA domain.	2.48779e-29
CP012670.1\|AUX19856.1\|396598_397537_+\|uncharacterized-protein	gnl\|CDD\|274976	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes a clade of Cas1 limited to the CYANO subtype of CRISPR/Cas system and most often the type found there.	5.80662e-79
CP012670.1\|AUX19865.1\|407739_408486_-\|hypothetical-protein	gnl\|CDD\|223609	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only].	1.23363e-07
CP012670.1\|AUX19861.1\|404038_404392_-\|transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	3.79406e-30

>CP012670.1|AUX19861.1|404038_404392_-|transposase
MGKLLVPDELWERIEPLLPKAEPKPQGGRPRTPDRIALTGILFVLKTGIPWEYLPQELGCSGMTCWRRLRDWQQAGVWGQLHKALLDELGGADKINWERAALDASLVPAKRGVKRLA
>CP012670.1|AUX19860.1|403436_403994_-|uncharacterized-protein
MKAGRQEDFPEILLPLFASSCEFPEKFEGMPQETGPNPTDRGRPGTKYHILVDQNGIPLAVEMTPANVHDSKMFTPMVDAVPTIARPCGRPRRRPKKLHADKAYDDPALRLACHLRHIVPRIARKGIESSEKLGRYRWVVERTIAWLRRFRRLTVRYERRADIHRAFLQLAVCLICLCHIQAGFC
>CP012670.1|AUX19859.1|401353_402613_+|transposase
MRQSAGVDACTEGKAKGNLTTTRSEERSHSMRARRQLERVGLSASSIERFLHAAVKVDLHVKTVLSLSLATLGVLHSVSLCIHVIGRGMAWARDGSPKHATKQVDRLLSNNNVSPWLLFDAWVRFVVGPREELLVALDWTEFDVDDHATLALYLITRHGRATPLIWRTVKKSSLAGKRNDYEDEVIERLHEILPKATRVTLLADRGFGDQERYAHLGNLGWDYIIRFRECIIVTDADDTARPAGEWLTSTGRAKMLKNVRVTQDKTAIAAVVLVHDKRMKEPWCLATSRADLTASQVTKLYGRRFCIEETFRDVKNVHFGMGLSATHIGDTARRDRLLLIAAFAHVLLTLLGEAGERAGLDRLLKTNTVKHRTLSLYNQGCYWYTAIPNMREERLVQLMTAYGEVLREHAVTREILGTI
>CP012670.1|AUX19858.1|398028_398850_-|hypothetical-protein
MAKLTIGQKAERVLLLLLGLRKNKVAAALVAHGFSDDDLAEGWRLLQRVTRTRLGFVATAAATDSGLINELDAWENKWFPIASATLKRHAPEAHAFMFRNLGQTEGAAVLVSVGTFVERWEHLARSKEKGGPDAGGEEGRKILARRGLTKAVIDEARELLARAGKLESVAEVAPAAAGDHDFEEAERQLWDWYLEWSTIVQTAIKDRRLLRELGFRRASSSRSSADAAAADDEEAEEDTGGASHDDGAGAEPAADPGAFLTGARPAAAARAGR
>CP012670.1|AUX19857.1|397662_397953_+|CRISPR-associated-endonuclease-Cas2
MRQSYIVSYDVCDPKRLRKIFKAMRGYGDWLQLSVWQCALSRRELVEMRRDLGQIIDARIDQVLIIDIGPANGRGRGAITSLGRAYVPSEQVAIVV
>CP012670.1|AUX19856.1|396598_397537_+|uncharacterized-protein
MGKRKDAWAHRSCALRREPRTGPGGRDQVMHVDLRRATSDCHDLCRPSAALPRGRGVLRALAGLREGEAPLALAQLRGGQSFARGVVVSKIKNARTMLRRNHAAAEPAVLSELDQLARKAAEAPSLASLLGLEGTAARAYFGAFPGMLKGPDEVRGAFDLEGRNRRPPRDPVNALLSLAYALLAKDLAVTLGTVGLDPLLGFYHQPRFGRPALALDLMEELRPIVADSVVVAAINNGVIAPDDFQRHGDAVALRPAGRKKFLMAYERRMDQLVTHPVFGYRISYRRVLEVQARLLARVLLGEVGAYPSFRTR
>CP012670.1|AUX19855.1|395693_396512_-|uncharacterized-protein
MPATGYTAIVDGHRVDILRDGVIVATGRWTGQRIEQSAACLVQDEIEDPDEALEASDAIYAKLEEQLAAEEAAALAAPAYDEQGVDLTLIDWVLDMTPRERLEMIESYAGVPFGRILEVLEDHEVEFIVIGGVAASLQGADWNTKDLDILYSRDAGNIRRLLDALSVLEARFRDLTGRRVVPTESHLLTHGPKLLLTKFGPLDLLGTLSMHDDETTYQSLVDQTATLETPRLSIRVLTLEGLIEVKKRAARPQDLRTLPILQAALERSRQRG
>CP012670.1|AUX19854.1|392938_395584_-|hypothetical-protein
MISAPPYATWFHTVARVAPYEWQRAVGESSACGYRLLRIPTGFGKTAGVVLPWLYHRALREDLAWPTRLVFCFPMRTLVEQTETAIAEWIERSRLSVSVHVLMGGVEAQRWELSPEQPAILLGTQDMLLSRAMNRGYGMGRARWPMPFGLVSQDALWVLDEVQLMDVGLATSAQLAAFRDHDAAARRTLRPTYAWWMSATLQPRWLTTVDFGAQVPPLAEQAVRIPEAERTGGLWEVRKTITLSDAVAELDVAKLALERHRPGTLTLLVVNQVQRAVDLFQALEERCHERKGKTRVRRPGAPELRLVHSRFRGVERSQWRRDFLSRAASRPEALPSEGRIVVATQVVEAGVDISARLLITDLAPWSSLVQRFGRCARYEGESGDIVVLGKTKTAAPYVEAELDAAADAAAALVRRAGDASPRAIDAFEDACDADQLGRLYVYAPAHLLRRRDLDELFDTTPDLTGSDLDVGRYIRSGEDRDVRVFWRPVDPASRTVSREHIGRVHRAELCPVPLRDLRDFARADRGGRPVFVLDYVLGAYRRVEEIERIPPGSTLLLPSSAGGYTDELGWNPKASAEVVPFAAPAEPADSAALRLDLSAEAAEDDSLSRAAWKSIATHGRETAETLRDVANALRLPERITALLDLAARWHDAGKAHATFQDAIAQDARARAGELGLRRDLAKAPDAAWSGKGYPSRPGFRHELASTLALLALLRRANPGHPALLGGCAELLAALGEPPSSASADDAIDSDHPLARELAELSAEELDLVAFLVCAHHGKVRTAWTSTPLDQRAGHGGIHGVRDGDVIDSLTLAARSGGSGDASVPSLTLSLEPAALGVGPRFGASWTERVAGLLEAWGPFALAYLEALLRAADARASMETTA
>CP012670.1|AUX19853.1|390683_392942_-|hypothetical-protein
MSLHLHHLAGCTPEPIAGYLKALGVLRAVASQADHRARARWNDGRFELVTSLDRDSLGRFFLEAYAPSPIIAPWNGGSGFYPKDTKDGIEPLSSSTTGRFAAYREAIAAGRAIVAARAESPKGEAKLEMIRACRRAWPESMLAWLDAAVVLTGEAARYPALLGTGGNDGRLDFTNNRMQRLVELLDPATGEPRSGARPLLAAALFGEPAPGLQRRAVGQFLPGNAGGPNQASSYLGESLVNPWDFVLLLEGALLLPVAAVRRLESGGLVQAAAPFAVRARAGGYASACAVDEGNQRGEQWMPLWNGAATLTEVRALFAEGRLVASAEKRQAIHAIDAARAVAGLGVARGVSEFVRFAYIERNGQANLAVPLGRWAVEAGEASERAGAPEHSRLLDEIDPWVEGLRSVGQGDSAPASLGRALRRVEAAMLAVCRQGSPERWQRLLLALAEAEEAIVARPKAAAAVAWLGPIPPLSPEWMRAADDGSTALRLAAAIASQTGPADRIGAEELGPIRAHCLPLDPRSGFRRLAVGEGGLARDPRVVWAGRDLADDLAAVAQRRMIEAALHGAHAFPLRGRAYAPLDDVALFLDGAVDEARVAGLSRALMAVDWKRAPRPPRQPRAARPSVLHALFRLAYTPDAVNGRPVGDRDGSTGSLSPLTPRLDPAPLRLLLAGRLHDAGAAAVRTLTAAGARPKLRVVAGAPELAHRLAATLAIPIAPEDLATLLRLICKPARPAVEDAPITPPPAAPTMPE
>CP012670.1|AUX19852.1|389706_390681_-|CRISPR-associated-protein
MSIDLSALLPDRAPYPSRLLLEQELRPVQGVRFQPTGFPDLGASLFEDPYENGGQRLLVESAQSMANRLEAVCWDRAAQDLIPELKGLSYVRVQRPDKSYLTSSITEAHRLNSPYILESKDKSFFNRLKDDTAPLAEGPIDRRKLAAIVFRYDASTLLHGLFLAKPDLVGGRLRIERALSSFIEAEDVSVAASGGVKNDAVNPSGDTGKGFGNVPFHRDEYTAKRITAFFNLDLHQIRGYGLGAAAERLLVLLGLFKIAALLEGDLRLRTACDLAPTGPLRVVRPESFPMPPVAALRAELPSAIAACKDLFAGSGAPTTVTFSS
>CP012670.1|AUX19862.1|405037_405655_-|hypothetical-protein
MSERVFKRLFVATGAYSCGKTTTLRHLASTRGYRVHGEAHRRVLDELGARTHGHPPDAPFHPIDAPEHVCPLCRKREFAARVLETQRTIEAEARDGDWLERGYLDPVEYYLRTSGEEEYPWPPGEPAFERYALVFLFAVMPELQAPRWGRSREERAAEAERINGRLGAMYRAAGFEVVDVAPGTVAERAELLASLSRTSDAAQHD
>CP012670.1|AUX19863.1|405662_406655_-|hypothetical-protein
MTPPIIPLPYIGRNLLFLEEALDELEARGITSPLLFRASEADKLARLLEHGTDRAGYPGERPWTDGPAQGRPIRHEDVIFATTADEIRRGEREPERSTSLKKFAVIARPLFVAYDARCFVKLCDRQYEYGDPARKPAALLALFPVTRVDPVQGWFSEEAGLAYRALVRSIHGGAMVEVGSWKGLSTAYVGRLAARRGVALHCVDAWEGSSDAYAARYSALLAAEDVPGAFEANMEALGLRPIVHRLASTDAAARFAEASLDLVFLDASHDAAAVLADLEAWWPRLKPGAILAGHDHNEEHAGVLEAVARFAARAGRAVEVGGGSVWWTRR
>CP012670.1|AUX19864.1|406651_407743_-|molybdenum-cofactor-biosynthesis-protein-A
MSARPFRDEWRRLKSRAFDLTGNSTAGATVRFDLWGRPVEVYRNANFSIYSRQPCNAKCHFCVEELRPASRGRSLAVQKTVEEDDGRYFDAMAESLDALRPLDPTVSITGGEPSHDPRLPRILALGQARRCRKRTLTTNGSGLLQQREGKRVIDWIVETGVQHLNISRAHPDHDTNARLMVMKDGLSVDELRRVVAAAAAGGTRVRLSCVLLQGQIDAVEPIVAYLRFARSLGVDNVIFRQLMKTDPAAVVENHVVKYSDRARVRLEPILDALSADARFSFERQIVGYYYYVEVFRFEDIDVVFEEADLAQLEETKRSGPGIVHELIFHPNARLASTWQPWDGILGPPTPPTTTTARAAQDAS
>CP012670.1|AUX19865.1|407739_408486_-|hypothetical-protein
MRTATRPQNATLTGTLPLDRPTAERPRRLYVATSNHCNRACPWCCTCSSPKGQTFLALDRYRASFPAEGPFEVQLEGGEPTIHPHFDEMVRLARVEPRCARVVVVTNGVELPREPAGLDAWLEKLGEPTTIKLSVNHHLLEHDGGLLDLARALRERLAALGGDRQLVLNVRLRKTEPDGDAWVAQAVRDAGLIELANVFHLQRYGFAQKREDWDEPFLVGTHFTMLNPDGGAFGPDLVARSDAMRRLP
>CP012670.1|AUX19866.1|408636_409575_-|hypothetical-protein
MTELLLTGLDGKNPLAFLSALGVLNALADRAKEGQPEPRLLWRAGGTYRPAIVGGPDRNALLDALVHDLESFRGEPAIERLRYRKDGNGAEAHDLKPPPGFFADYLSGLVREDRRRSLDFAAAFATDVAVDNNGNTKPTALHFTAGQQEFLGMVSELTQGVRVEDLEEALFGPWRYERPLPVLQWDNTSARDYALRASDPSKDKKLGVPGADWLAFRGLPFIRVAPVGDRIVTTGCSGEWKTGTFRWPIWTVPLPRSVIGSVLTSPELVEVDPSVLRARGIAIVLESAIRRSDQGGYGSFAPARMARPARGD
>CP012670.1|AUX19867.1|409571_412643_-|hypothetical-protein
MADLSLDDFAAYFDAVHGATAAPGGRATPFPWQERLLAEVARVGEWPALLDLPTGTGKTAAIDVAIFHLALDAASPPAQRKAPRRIVMVVDRRTIVDQAFERAKAIARALRGARDGVLRAVADRLRALADLREGEAPLALAQLRGGMPRDDAWAQRPDQPLVAVSTVDQVGSRLLFRGYGVSDVMRPIHAGLLGNDTLLLLDEVHLSRPFRDTLRSLRRYRTRASSKLPDRWHLVEMSATPGSPPAISGGTSATPATPDDERVFGLNDDDLRNERLAMRLRAKKPVVRHEVKVSGGEDARRAAFAEACADHALRFVAPGRAVGVIVNRVATAREAAAILRKRVGDSADVFLVTGRMRPLDRDDLDGKLGPLVRSGRVRSAAARPVVVVATQCIEAGADFDLDAIVTECASLDALRQRFGRLDRLGALELAPHDVRGVVLVRSDAMTKDHVDPVYGKALAETWTWIGEGTRDFGIQAIAAALPEGEALDAMLSPKSRAPVMLPAHLDLWVQTRPSPVIDPDVSLWLHGIDQRQAPEVQVVWRADVTEALLEQAMEDEETREALLKRVEACTPVGLEALSMPIHAVRAWLQGGTGPDLADVEGRTVGEDDRKPRIERLALAWKGDESRVINPRELHAGSTIVVPSTYGGLAEGTWDPSSHEPVSDLGDRARWQQTGRPTLRLHPELLRQHADVLDRAWPEAPVPVEEEGSDVEDREVVDAWLSQMSEAIDAWLSQSNAKATGASWLGGVVKALAEQGRKRPALLRLDGIARLGAGGGLERGYFALVGRVRAHAEGVGDVTTEDDGASHTGVEVTLREHLGGVAAWAERFAEQCGLPPEVVRDVELAARWHDAGKVDPRFQRMLHGGSELRAAVAAEPLAKSAIVAADRAARARARERSGYPRGARHELSSVALLEARPSLLDGAKDPDLVLHLVGSHHGWCRPLAPVVDDPEPVELAFDAGGTVVSVSSDHGVPRLDSGIAERFWRLVERYGWFGLAWLEAILRLADHRRSEEEQRGEIEARDER
>CP012670.1|AUX19868.1|412635_414327_-|hypothetical-protein
MLAFEVALLTGRYVATAVDDRGRAEWPPHPARLFSALVAAHFEALDRSEAERAALEWLERQGPPEITAPEAAAREVVTVFVPVNDTSVVGSLDDEALLVREARAALDAAREKGGKALAAAEKKLAKAEARFEDAVRKALARAPAGKEGKDGPARAASLLPERRTRQPRTFPSSAPAELGSAAPPLVFAWPSADPTPEQRATLDALAARVTRLGHSASLVSVRLRDDRPEATWIPDDVGRGRAGDEAVLRVVGPGQIEALCAAFELQADAPGRVMPASFQRYVRPRAAGEASAPAPRFGDGWIVLRRVAGPRLPSIRGVDVARTVRKAMMAAYGPGAPEILSGHRASGGPSERPHLAYVPLPFVGSEHADGAILGVALILPRDATREERLAVYRALDAWERQRREDDEERPRLPVHLGRAGELVLERLEEHALQSTLRPATWCAEAVSWASATPVALDRNPGDLGARDPRREAAAYAEAEETVATACERIGLPRPARVTVTPAAPLAGAEKARYFPPFQAGSPPLQRVLVHARLTFDAPVRGPILLGAGRYFGLGLFRPLREHG
>CP012670.1|AUX19869.1|414326_415604_-|CRISPR-associated-protein
MRSLDLDTLTHAVAGGAAALRAITRLEPAGGPGDKVFPPTYVKERNATTKYAMEPRRIDGREVNTVLLDSVASQANRFEESLLEGWRRGELPFPVVQVDFSKEEGLEDLEQITALQAPHRIADALLRDSVLGGAPFRHTTVGKDITDARPTHATAMFKYCPTALIFGVWDSTGPKGGLGAKFQRCLVSEIVGIDVALGVKTASRLDPAGIQTKAGPVFKHKDPSQDWTVDPKEAEIVKNKPVEFSRSGGGDGKKGSPSAINHGNIPPSIDSDAGGVTMSHAVQTTVLSLGALRRLRFQTACSGERLPAEQRDAAETAARTALAALALAGIVYQRDQGYDLRSRSILVAKEPLVLELLGRDGGEPERFSLSRAEAVALLQGAEQKAREHGLGWDPKPITLTPAPKLVGLIRKSREVAASGEAEGDS
>CP012670.1|AUX19870.1|416301_418290_+|CRISPR-associated-protein-Cas4
MINEVLYCERLLYLEWAQGEFEDNVFTVEGRSVHRRADVAGGELPPPPAGAAPGAAEGHAGTTPSPVPGMPPASPMQPAAPEAARRGSARRALRDDDAAEPPPYEARSVWLSSERLGITARIDVVEGDASGRLLPIEYKRGHAPDVPGGAYLPERAQLCAHVLLLREHGYACDEAAIYFAASRRRVPIAIDEALVAATLAAAARAREVTGAACIPPPLVDSPKCNGCSLVGICLPDETNLLRRLAGEELDAPAEGLLAGVEAVEQGPDELEGPLEVDPWGLAGEASEASEASAASEVSAASEASAAAKPGEGDAAGETELRRLHPARDDRLPVYVQEQGARIGLAGERLVVHTRAGGRSEARLSNTSQVALLGNVQISTQAMRALLERGIPLCFMTYGGYYLGRATGLDSRNVELRVAQHRAAADEAFCLSFARGVVVSKIKNARTMLRRNHAAAEPAVLSELDQLARKAAEAPSLASLLGLEGTAARAYFGAFPGMLKGPDEVRGAFDLEGRNRRPPRDPVNALLSLAYALLAKDLAVTLGTVGLDPLLGFYHQPRFGRPALALDLMEEFRPIVADSVVVATINNGVVAPDDFQRHGDAVALRPAGRKKFLMAYERRMDQLVTHPVFGYRISYRRVLEVQARLLARVLLGEVEAYPSFRTR
>CP012670.1|AUX19871.1|418449_418740_+|CRISPR-associated-endonuclease-Cas2
MRQSYIVSYDVCDPKRLRKIFKAMRGYGDWLQLSVWQCALSRRELVEMRRDLGQIIDARIDQVLIIDIGPANGRGRGAITSLGRAYVPSEQVAIVV

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Crispr_ID: CP012670_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_4

402638-403409

Unclear

Consensus_repeat	Method
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	PILER-CR
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CRISPRCasFinder
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CRT

10 spacers

cas2,cas1,cas3,cas8u1,cas7,csb2gr5

The CRISPR arrays of CP012670_4

>merge|CP012670|4|402638-403409|PILER-CR,CRISPRCasFinder,CRT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCCGTATCCTCCTCCCGGCGCCGCGCCGATGCTGTGTATATCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCAGCCGCCGGATCTCCACGTCCTGGGCCCGGCCGAGCCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCTTCACGCTGGTTCTTTCCCCGTGATGGGGGGGTGTACTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCTCGGAGCTCGCAGGCCGCCTGTTCGGCCAGCTCGCCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCGCGCGCGCGCGCGACTCACATGGGAGATCCTTGGATAGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCAGGATCTCGCTCGCCAGCACCAGGCCGGGCAGGCAGACCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCTGAGGCTTCGCCGTCGTCGGCGGGGAGGGCGCACGGTCGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCCCAACCAGCCCCACCAGCCCCACCAGCTCGCCTTGGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCACGTACGCCGCCGCCTTCTCGTCGTTGCTGGGCTTCTTCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGAGGCTCAGGGTACTGGAGGAGAGGCGATGAAGTCGGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCA

>CP012670|4|2|402638-403408|PILER-CR
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGTATCCTCCTCCCGGCGCCGCGCCGATGCTGTGTATAT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AGCCGCCGGATCTCCACGTCCTGGGCCCGGCCGAGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TTCACGCTGGTTCTTTCCCCGTGATGGGGGGGTGTA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCGGAGCTCGCAGGCCGCCTGTTCGGCCAGCTCGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CGCGCGCGCGCGCGACTCACATGGGAGATCCTTGGATAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AGGATCTCGCTCGCCAGCACCAGGCCGGGCAGGCAGAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TGAGGCTTCGCCGTCGTCGGCGGGGAGGGCGCACGGTCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCCAACCAGCCCCACCAGCCCCACCAGCTCGCCTTGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ACGTACGCCGCCGCCTTCTCGTCGTTGCTGGGCTTCTT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GAGGCTCAGGGTACTGGAGGAGAGGCGATGAAGTCGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC

>CP012670|4|4|402638-403409|CRISPRCasFinder
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGTATCCTCCTCCCGGCGCCGCGCCGATGCTGTGTATAT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AGCCGCCGGATCTCCACGTCCTGGGCCCGGCCGAGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TTCACGCTGGTTCTTTCCCCGTGATGGGGGGGTGTA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCGGAGCTCGCAGGCCGCCTGTTCGGCCAGCTCGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CGCGCGCGCGCGCGACTCACATGGGAGATCCTTGGATAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AGGATCTCGCTCGCCAGCACCAGGCCGGGCAGGCAGAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TGAGGCTTCGCCGTCGTCGGCGGGGAGGGCGCACGGTCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCCAACCAGCCCCACCAGCCCCACCAGCTCGCCTTGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ACGTACGCCGCCGCCTTCTCGTCGTTGCTGGGCTTCTT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GAGGCTCAGGGTACTGGAGGAGAGGCGATGAAGTCGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCA

>CP012670|4|2|402638-403408|CRT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGTATCCTCCTCCCGGCGCCGCGCCGATGCTGTGTATAT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AGCCGCCGGATCTCCACGTCCTGGGCCCGGCCGAGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TTCACGCTGGTTCTTTCCCCGTGATGGGGGGGTGTA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCGGAGCTCGCAGGCCGCCTGTTCGGCCAGCTCGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CGCGCGCGCGCGCGACTCACATGGGAGATCCTTGGATAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AGGATCTCGCTCGCCAGCACCAGGCCGGGCAGGCAGAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TGAGGCTTCGCCGTCGTCGGCGGGGAGGGCGCACGGTCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCCAACCAGCCCCACCAGCCCCACCAGCTCGCCTTGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ACGTACGCCGCCGCCTTCTCGTCGTTGCTGGGCTTCTT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GAGGCTCAGGGTACTGGAGGAGAGGCGATGAAGTCGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX19858.1\|398028_398850_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX19863.1\|405662_406655_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379276
CP012670.1\|AUX19850.1\|387376_387805_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376462
CP012670.1\|AUX19862.1\|405037_405655_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379235
CP012670.1\|AUX19859.1\|401353_402613_+\|transposase	unknown	unknown	gnl\|CDD\|376573
CP012670.1\|AUX19852.1\|389706_390681_-\|CRISPR-associated-protein	cas7	cd09678_cas7_CAS-I-U	gnl\|CDD\|378223
CP012670.1\|AUX19857.1\|397662_397953_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|378256
CP012670.1\|AUX19867.1\|409571_412643_-\|hypothetical-protein	cas3	cd09696_cas3_CAS-I-U	gnl\|CDD\|187827
CP012670.1\|AUX19853.1\|390683_392942_-\|hypothetical-protein	cas8u1	cd09767_cas8u1_CAS-I-U	gnl\|CDD\|274989
CP012670.1\|AUX19854.1\|392938_395584_-\|hypothetical-protein	cas3	cd09696_cas3_CAS-I-U	gnl\|CDD\|274235
CP012670.1\|AUX19864.1\|406651_407743_-\|molybdenum-cofactor-biosynthesis-protein-A	unknown	unknown	gnl\|CDD\|274250
CP012670.1\|AUX19855.1\|395693_396512_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX19851.1\|388021_389707_-\|CRISPR-associated-protein	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl\|CDD\|274005
CP012670.1\|AUX19860.1\|403436_403994_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|376573
CP012670.1\|AUX19856.1\|396598_397537_+\|uncharacterized-protein	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274976
CP012670.1\|AUX19868.1\|412635_414327_-\|hypothetical-protein	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl\|CDD\|274005
CP012670.1\|AUX19865.1\|407739_408486_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223609
CP012670.1\|AUX19869.1\|414326_415604_-\|CRISPR-associated-protein	cas7	cd09738_cas7_CAS-I-U	gnl\|CDD\|378223
CP012670.1\|AUX19861.1\|404038_404392_-\|transposase	unknown	unknown	gnl\|CDD\|379129
CP012670.1\|AUX19866.1\|408636_409575_-\|hypothetical-protein	cas8u1	mkCas0114_cas8u1_CAS-I-U	unknown

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX19850.1\|387376_387805_-\|hypothetical-protein	gnl\|CDD\|376462	pfam01124, MAPEG, MAPEG family. This family is has been called MAPEG (Membrane Associated Proteins in Eicosanoid and Glutathione metabolism). It includes proteins such as Prostaglandin E synthase. This enzyme catalyzes the synthesis of PGE2 from PGH2 (produced by cyclooxygenase from arachidonic acid). Because of structural similarities in the active sites of FLAP, LTC4 synthase and PGE synthase, substrates for each enzyme can compete with one another and modulate synthetic activity.	3.0062e-14
CP012670.1\|AUX19863.1\|405662_406655_-\|hypothetical-protein	gnl\|CDD\|379276	pfam13578, Methyltransf_24, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.00974e-21
CP012670.1\|AUX19869.1\|414326_415604_-\|CRISPR-associated-protein	gnl\|CDD\|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	1.2315e-58
CP012670.1\|AUX19857.1\|397662_397953_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	2.00229e-17
CP012670.1\|AUX19852.1\|389706_390681_-\|CRISPR-associated-protein	gnl\|CDD\|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	1.20216e-47
CP012670.1\|AUX19859.1\|401353_402613_+\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	8.38433e-06
CP012670.1\|AUX19867.1\|409571_412643_-\|hypothetical-protein	gnl\|CDD\|187827	cd09696, Cas3_I, CRISPR/Cas system-associated protein Cas3; Distinct Cas3 family with HD domain fused to C-termus of Helicase domain. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; DNA helicase Cas3; This protein includes both DEAH and HD motifs; signature gene for Type I.	7.95149e-87
CP012670.1\|AUX19860.1\|403436_403994_-\|uncharacterized-protein	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	9.46684e-14
CP012670.1\|AUX19853.1\|390683_392942_-\|hypothetical-protein	gnl\|CDD\|274989	TIGR04113, hypothetical_protein_AaLAA1DRAFT_1703, CRISPR-associated protein Csx17, subtype Dpsyc. Members of this protein family are found exclusively in CRISPR-associated (cas) type I system gene clusters of the Dpsyc subtype. Markers for that type include a variant form of cas3 (model TIGR02621) and the GSU0054-like protein family (model TIGR02165). This family occurs in less than half of known Dpsyc clusters.	0
CP012670.1\|AUX19854.1\|392938_395584_-\|hypothetical-protein	gnl\|CDD\|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	1.07335e-37
CP012670.1\|AUX19864.1\|406651_407743_-\|molybdenum-cofactor-biosynthesis-protein-A	gnl\|CDD\|274250	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial. The model for this family describes molybdenum cofactor biosynthesis protein A, or MoaA, as found in bacteria. It does not include the family of probable functional equivalent proteins from the archaea. MoaA works together with MoaC to synthesize precursor Z from guanine. [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	2.1335e-10
CP012670.1\|AUX19851.1\|388021_389707_-\|CRISPR-associated-protein	gnl\|CDD\|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	3.67182e-30
CP012670.1\|AUX19862.1\|405037_405655_-\|hypothetical-protein	gnl\|CDD\|379235	pfam13521, AAA_28, AAA domain.	2.48779e-29
CP012670.1\|AUX19856.1\|396598_397537_+\|uncharacterized-protein	gnl\|CDD\|274976	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes a clade of Cas1 limited to the CYANO subtype of CRISPR/Cas system and most often the type found there.	5.80662e-79
CP012670.1\|AUX19868.1\|412635_414327_-\|hypothetical-protein	gnl\|CDD\|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	4.12124e-44
CP012670.1\|AUX19865.1\|407739_408486_-\|hypothetical-protein	gnl\|CDD\|223609	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only].	1.23363e-07
CP012670.1\|AUX19861.1\|404038_404392_-\|transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	3.79406e-30

>CP012670.1|AUX19859.1|401353_402613_+|transposase
MRQSAGVDACTEGKAKGNLTTTRSEERSHSMRARRQLERVGLSASSIERFLHAAVKVDLHVKTVLSLSLATLGVLHSVSLCIHVIGRGMAWARDGSPKHATKQVDRLLSNNNVSPWLLFDAWVRFVVGPREELLVALDWTEFDVDDHATLALYLITRHGRATPLIWRTVKKSSLAGKRNDYEDEVIERLHEILPKATRVTLLADRGFGDQERYAHLGNLGWDYIIRFRECIIVTDADDTARPAGEWLTSTGRAKMLKNVRVTQDKTAIAAVVLVHDKRMKEPWCLATSRADLTASQVTKLYGRRFCIEETFRDVKNVHFGMGLSATHIGDTARRDRLLLIAAFAHVLLTLLGEAGERAGLDRLLKTNTVKHRTLSLYNQGCYWYTAIPNMREERLVQLMTAYGEVLREHAVTREILGTI
>CP012670.1|AUX19858.1|398028_398850_-|hypothetical-protein
MAKLTIGQKAERVLLLLLGLRKNKVAAALVAHGFSDDDLAEGWRLLQRVTRTRLGFVATAAATDSGLINELDAWENKWFPIASATLKRHAPEAHAFMFRNLGQTEGAAVLVSVGTFVERWEHLARSKEKGGPDAGGEEGRKILARRGLTKAVIDEARELLARAGKLESVAEVAPAAAGDHDFEEAERQLWDWYLEWSTIVQTAIKDRRLLRELGFRRASSSRSSADAAAADDEEAEEDTGGASHDDGAGAEPAADPGAFLTGARPAAAARAGR
>CP012670.1|AUX19857.1|397662_397953_+|CRISPR-associated-endonuclease-Cas2
MRQSYIVSYDVCDPKRLRKIFKAMRGYGDWLQLSVWQCALSRRELVEMRRDLGQIIDARIDQVLIIDIGPANGRGRGAITSLGRAYVPSEQVAIVV
>CP012670.1|AUX19856.1|396598_397537_+|uncharacterized-protein
MGKRKDAWAHRSCALRREPRTGPGGRDQVMHVDLRRATSDCHDLCRPSAALPRGRGVLRALAGLREGEAPLALAQLRGGQSFARGVVVSKIKNARTMLRRNHAAAEPAVLSELDQLARKAAEAPSLASLLGLEGTAARAYFGAFPGMLKGPDEVRGAFDLEGRNRRPPRDPVNALLSLAYALLAKDLAVTLGTVGLDPLLGFYHQPRFGRPALALDLMEELRPIVADSVVVAAINNGVIAPDDFQRHGDAVALRPAGRKKFLMAYERRMDQLVTHPVFGYRISYRRVLEVQARLLARVLLGEVGAYPSFRTR
>CP012670.1|AUX19855.1|395693_396512_-|uncharacterized-protein
MPATGYTAIVDGHRVDILRDGVIVATGRWTGQRIEQSAACLVQDEIEDPDEALEASDAIYAKLEEQLAAEEAAALAAPAYDEQGVDLTLIDWVLDMTPRERLEMIESYAGVPFGRILEVLEDHEVEFIVIGGVAASLQGADWNTKDLDILYSRDAGNIRRLLDALSVLEARFRDLTGRRVVPTESHLLTHGPKLLLTKFGPLDLLGTLSMHDDETTYQSLVDQTATLETPRLSIRVLTLEGLIEVKKRAARPQDLRTLPILQAALERSRQRG
>CP012670.1|AUX19854.1|392938_395584_-|hypothetical-protein
MISAPPYATWFHTVARVAPYEWQRAVGESSACGYRLLRIPTGFGKTAGVVLPWLYHRALREDLAWPTRLVFCFPMRTLVEQTETAIAEWIERSRLSVSVHVLMGGVEAQRWELSPEQPAILLGTQDMLLSRAMNRGYGMGRARWPMPFGLVSQDALWVLDEVQLMDVGLATSAQLAAFRDHDAAARRTLRPTYAWWMSATLQPRWLTTVDFGAQVPPLAEQAVRIPEAERTGGLWEVRKTITLSDAVAELDVAKLALERHRPGTLTLLVVNQVQRAVDLFQALEERCHERKGKTRVRRPGAPELRLVHSRFRGVERSQWRRDFLSRAASRPEALPSEGRIVVATQVVEAGVDISARLLITDLAPWSSLVQRFGRCARYEGESGDIVVLGKTKTAAPYVEAELDAAADAAAALVRRAGDASPRAIDAFEDACDADQLGRLYVYAPAHLLRRRDLDELFDTTPDLTGSDLDVGRYIRSGEDRDVRVFWRPVDPASRTVSREHIGRVHRAELCPVPLRDLRDFARADRGGRPVFVLDYVLGAYRRVEEIERIPPGSTLLLPSSAGGYTDELGWNPKASAEVVPFAAPAEPADSAALRLDLSAEAAEDDSLSRAAWKSIATHGRETAETLRDVANALRLPERITALLDLAARWHDAGKAHATFQDAIAQDARARAGELGLRRDLAKAPDAAWSGKGYPSRPGFRHELASTLALLALLRRANPGHPALLGGCAELLAALGEPPSSASADDAIDSDHPLARELAELSAEELDLVAFLVCAHHGKVRTAWTSTPLDQRAGHGGIHGVRDGDVIDSLTLAARSGGSGDASVPSLTLSLEPAALGVGPRFGASWTERVAGLLEAWGPFALAYLEALLRAADARASMETTA
>CP012670.1|AUX19853.1|390683_392942_-|hypothetical-protein
MSLHLHHLAGCTPEPIAGYLKALGVLRAVASQADHRARARWNDGRFELVTSLDRDSLGRFFLEAYAPSPIIAPWNGGSGFYPKDTKDGIEPLSSSTTGRFAAYREAIAAGRAIVAARAESPKGEAKLEMIRACRRAWPESMLAWLDAAVVLTGEAARYPALLGTGGNDGRLDFTNNRMQRLVELLDPATGEPRSGARPLLAAALFGEPAPGLQRRAVGQFLPGNAGGPNQASSYLGESLVNPWDFVLLLEGALLLPVAAVRRLESGGLVQAAAPFAVRARAGGYASACAVDEGNQRGEQWMPLWNGAATLTEVRALFAEGRLVASAEKRQAIHAIDAARAVAGLGVARGVSEFVRFAYIERNGQANLAVPLGRWAVEAGEASERAGAPEHSRLLDEIDPWVEGLRSVGQGDSAPASLGRALRRVEAAMLAVCRQGSPERWQRLLLALAEAEEAIVARPKAAAAVAWLGPIPPLSPEWMRAADDGSTALRLAAAIASQTGPADRIGAEELGPIRAHCLPLDPRSGFRRLAVGEGGLARDPRVVWAGRDLADDLAAVAQRRMIEAALHGAHAFPLRGRAYAPLDDVALFLDGAVDEARVAGLSRALMAVDWKRAPRPPRQPRAARPSVLHALFRLAYTPDAVNGRPVGDRDGSTGSLSPLTPRLDPAPLRLLLAGRLHDAGAAAVRTLTAAGARPKLRVVAGAPELAHRLAATLAIPIAPEDLATLLRLICKPARPAVEDAPITPPPAAPTMPE
>CP012670.1|AUX19852.1|389706_390681_-|CRISPR-associated-protein
MSIDLSALLPDRAPYPSRLLLEQELRPVQGVRFQPTGFPDLGASLFEDPYENGGQRLLVESAQSMANRLEAVCWDRAAQDLIPELKGLSYVRVQRPDKSYLTSSITEAHRLNSPYILESKDKSFFNRLKDDTAPLAEGPIDRRKLAAIVFRYDASTLLHGLFLAKPDLVGGRLRIERALSSFIEAEDVSVAASGGVKNDAVNPSGDTGKGFGNVPFHRDEYTAKRITAFFNLDLHQIRGYGLGAAAERLLVLLGLFKIAALLEGDLRLRTACDLAPTGPLRVVRPESFPMPPVAALRAELPSAIAACKDLFAGSGAPTTVTFSS
>CP012670.1|AUX19851.1|388021_389707_-|CRISPR-associated-protein
MLRLAIRFLSGSYHATPWSRHVNEGDIEWPPSPWRLYRALLATGFARLGWTAVPPEGRTLIERLAASPPVYHMPPASTGHTRHYMPLYKNATAKVLDAFAFVGRDEGAVLGVTWEVEPTEAERALFAALADRLSYLGRAESWVAAEVTDALPETLSPCRASECAPGPEYERIALLAPLDAATYAAFRRDRVSTTPGARQEEPARRGAKAPKKGAMSREAAKLEALYPVDLLAALLKETGDLQREGWSQPPGSRWLSYWRERDALAKVSARAPRSAHERAPRADTALLALASDTTNGEVLPRLVDGLLRMEVLHAALVRRSDRGDGLGPSPCLTGKDARGEPRRGHGHAWLLPASLERNEQLDHVLVHAAMKLDERAYEALSSVRVFYWNNVPRTFVTLVGLGVREDFEQAVPYVRAATVWKSVLPFVPPRHLKRQGANSLEGQVQAELASRNLPPAERIEVEIDGGDYRAASDFWDLWQRRHPGQIHLAAHGGEEDRALRPEERLATRWRHFRSARLLKPEQRPPVVASLGLRLTFAKPVRGPIALGYASHFGLGVMAPER
>CP012670.1|AUX19850.1|387376_387805_-|hypothetical-protein
MPPTFKIWVASLLVLYFKMHFNSAMQKRGRVAAGGYPRPEDAAMFGLAHKDDTGLAWRAGRCWQNDLENIPLYLFVSLAYVLAGGPELWAYVLFGAFTAARVAHTACYLLSLQPWRLLCYATAHFAQLAILGFVVHRVFLAM
>CP012670.1|AUX19860.1|403436_403994_-|uncharacterized-protein
MKAGRQEDFPEILLPLFASSCEFPEKFEGMPQETGPNPTDRGRPGTKYHILVDQNGIPLAVEMTPANVHDSKMFTPMVDAVPTIARPCGRPRRRPKKLHADKAYDDPALRLACHLRHIVPRIARKGIESSEKLGRYRWVVERTIAWLRRFRRLTVRYERRADIHRAFLQLAVCLICLCHIQAGFC
>CP012670.1|AUX19861.1|404038_404392_-|transposase
MGKLLVPDELWERIEPLLPKAEPKPQGGRPRTPDRIALTGILFVLKTGIPWEYLPQELGCSGMTCWRRLRDWQQAGVWGQLHKALLDELGGADKINWERAALDASLVPAKRGVKRLA
>CP012670.1|AUX19862.1|405037_405655_-|hypothetical-protein
MSERVFKRLFVATGAYSCGKTTTLRHLASTRGYRVHGEAHRRVLDELGARTHGHPPDAPFHPIDAPEHVCPLCRKREFAARVLETQRTIEAEARDGDWLERGYLDPVEYYLRTSGEEEYPWPPGEPAFERYALVFLFAVMPELQAPRWGRSREERAAEAERINGRLGAMYRAAGFEVVDVAPGTVAERAELLASLSRTSDAAQHD
>CP012670.1|AUX19863.1|405662_406655_-|hypothetical-protein
MTPPIIPLPYIGRNLLFLEEALDELEARGITSPLLFRASEADKLARLLEHGTDRAGYPGERPWTDGPAQGRPIRHEDVIFATTADEIRRGEREPERSTSLKKFAVIARPLFVAYDARCFVKLCDRQYEYGDPARKPAALLALFPVTRVDPVQGWFSEEAGLAYRALVRSIHGGAMVEVGSWKGLSTAYVGRLAARRGVALHCVDAWEGSSDAYAARYSALLAAEDVPGAFEANMEALGLRPIVHRLASTDAAARFAEASLDLVFLDASHDAAAVLADLEAWWPRLKPGAILAGHDHNEEHAGVLEAVARFAARAGRAVEVGGGSVWWTRR
>CP012670.1|AUX19864.1|406651_407743_-|molybdenum-cofactor-biosynthesis-protein-A
MSARPFRDEWRRLKSRAFDLTGNSTAGATVRFDLWGRPVEVYRNANFSIYSRQPCNAKCHFCVEELRPASRGRSLAVQKTVEEDDGRYFDAMAESLDALRPLDPTVSITGGEPSHDPRLPRILALGQARRCRKRTLTTNGSGLLQQREGKRVIDWIVETGVQHLNISRAHPDHDTNARLMVMKDGLSVDELRRVVAAAAAGGTRVRLSCVLLQGQIDAVEPIVAYLRFARSLGVDNVIFRQLMKTDPAAVVENHVVKYSDRARVRLEPILDALSADARFSFERQIVGYYYYVEVFRFEDIDVVFEEADLAQLEETKRSGPGIVHELIFHPNARLASTWQPWDGILGPPTPPTTTTARAAQDAS
>CP012670.1|AUX19865.1|407739_408486_-|hypothetical-protein
MRTATRPQNATLTGTLPLDRPTAERPRRLYVATSNHCNRACPWCCTCSSPKGQTFLALDRYRASFPAEGPFEVQLEGGEPTIHPHFDEMVRLARVEPRCARVVVVTNGVELPREPAGLDAWLEKLGEPTTIKLSVNHHLLEHDGGLLDLARALRERLAALGGDRQLVLNVRLRKTEPDGDAWVAQAVRDAGLIELANVFHLQRYGFAQKREDWDEPFLVGTHFTMLNPDGGAFGPDLVARSDAMRRLP
>CP012670.1|AUX19866.1|408636_409575_-|hypothetical-protein
MTELLLTGLDGKNPLAFLSALGVLNALADRAKEGQPEPRLLWRAGGTYRPAIVGGPDRNALLDALVHDLESFRGEPAIERLRYRKDGNGAEAHDLKPPPGFFADYLSGLVREDRRRSLDFAAAFATDVAVDNNGNTKPTALHFTAGQQEFLGMVSELTQGVRVEDLEEALFGPWRYERPLPVLQWDNTSARDYALRASDPSKDKKLGVPGADWLAFRGLPFIRVAPVGDRIVTTGCSGEWKTGTFRWPIWTVPLPRSVIGSVLTSPELVEVDPSVLRARGIAIVLESAIRRSDQGGYGSFAPARMARPARGD
>CP012670.1|AUX19867.1|409571_412643_-|hypothetical-protein
MADLSLDDFAAYFDAVHGATAAPGGRATPFPWQERLLAEVARVGEWPALLDLPTGTGKTAAIDVAIFHLALDAASPPAQRKAPRRIVMVVDRRTIVDQAFERAKAIARALRGARDGVLRAVADRLRALADLREGEAPLALAQLRGGMPRDDAWAQRPDQPLVAVSTVDQVGSRLLFRGYGVSDVMRPIHAGLLGNDTLLLLDEVHLSRPFRDTLRSLRRYRTRASSKLPDRWHLVEMSATPGSPPAISGGTSATPATPDDERVFGLNDDDLRNERLAMRLRAKKPVVRHEVKVSGGEDARRAAFAEACADHALRFVAPGRAVGVIVNRVATAREAAAILRKRVGDSADVFLVTGRMRPLDRDDLDGKLGPLVRSGRVRSAAARPVVVVATQCIEAGADFDLDAIVTECASLDALRQRFGRLDRLGALELAPHDVRGVVLVRSDAMTKDHVDPVYGKALAETWTWIGEGTRDFGIQAIAAALPEGEALDAMLSPKSRAPVMLPAHLDLWVQTRPSPVIDPDVSLWLHGIDQRQAPEVQVVWRADVTEALLEQAMEDEETREALLKRVEACTPVGLEALSMPIHAVRAWLQGGTGPDLADVEGRTVGEDDRKPRIERLALAWKGDESRVINPRELHAGSTIVVPSTYGGLAEGTWDPSSHEPVSDLGDRARWQQTGRPTLRLHPELLRQHADVLDRAWPEAPVPVEEEGSDVEDREVVDAWLSQMSEAIDAWLSQSNAKATGASWLGGVVKALAEQGRKRPALLRLDGIARLGAGGGLERGYFALVGRVRAHAEGVGDVTTEDDGASHTGVEVTLREHLGGVAAWAERFAEQCGLPPEVVRDVELAARWHDAGKVDPRFQRMLHGGSELRAAVAAEPLAKSAIVAADRAARARARERSGYPRGARHELSSVALLEARPSLLDGAKDPDLVLHLVGSHHGWCRPLAPVVDDPEPVELAFDAGGTVVSVSSDHGVPRLDSGIAERFWRLVERYGWFGLAWLEAILRLADHRRSEEEQRGEIEARDER
>CP012670.1|AUX19868.1|412635_414327_-|hypothetical-protein
MLAFEVALLTGRYVATAVDDRGRAEWPPHPARLFSALVAAHFEALDRSEAERAALEWLERQGPPEITAPEAAAREVVTVFVPVNDTSVVGSLDDEALLVREARAALDAAREKGGKALAAAEKKLAKAEARFEDAVRKALARAPAGKEGKDGPARAASLLPERRTRQPRTFPSSAPAELGSAAPPLVFAWPSADPTPEQRATLDALAARVTRLGHSASLVSVRLRDDRPEATWIPDDVGRGRAGDEAVLRVVGPGQIEALCAAFELQADAPGRVMPASFQRYVRPRAAGEASAPAPRFGDGWIVLRRVAGPRLPSIRGVDVARTVRKAMMAAYGPGAPEILSGHRASGGPSERPHLAYVPLPFVGSEHADGAILGVALILPRDATREERLAVYRALDAWERQRREDDEERPRLPVHLGRAGELVLERLEEHALQSTLRPATWCAEAVSWASATPVALDRNPGDLGARDPRREAAAYAEAEETVATACERIGLPRPARVTVTPAAPLAGAEKARYFPPFQAGSPPLQRVLVHARLTFDAPVRGPILLGAGRYFGLGLFRPLREHG
>CP012670.1|AUX19869.1|414326_415604_-|CRISPR-associated-protein
MRSLDLDTLTHAVAGGAAALRAITRLEPAGGPGDKVFPPTYVKERNATTKYAMEPRRIDGREVNTVLLDSVASQANRFEESLLEGWRRGELPFPVVQVDFSKEEGLEDLEQITALQAPHRIADALLRDSVLGGAPFRHTTVGKDITDARPTHATAMFKYCPTALIFGVWDSTGPKGGLGAKFQRCLVSEIVGIDVALGVKTASRLDPAGIQTKAGPVFKHKDPSQDWTVDPKEAEIVKNKPVEFSRSGGGDGKKGSPSAINHGNIPPSIDSDAGGVTMSHAVQTTVLSLGALRRLRFQTACSGERLPAEQRDAAETAARTALAALALAGIVYQRDQGYDLRSRSILVAKEPLVLELLGRDGGEPERFSLSRAEAVALLQGAEQKAREHGLGWDPKPITLTPAPKLVGLIRKSREVAASGEAEGDS

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Crispr_ID: CP012670_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_6

420381-423904

TypeIII

Consensus_repeat	Method
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	PILER-CR
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CRISPRCasFinder
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CRT

48 spacers

cas2,cas1,cas7,csb2gr5,cas3,cas8u1,cas10,cmr3gr5,cmr1gr7

The CRISPR arrays of CP012670_6

>merge|CP012670|6|420381-423904|PILER-CR,CRISPRCasFinder,CRT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCAGCTGCTCAGTCGCGTCACCGTCAGACGCGCTCACTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCTCGTGGGGTCGAGCAGCTCCAGCGGATTTCGCCCCAGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGGTCGAGCTCGAGCGCATCAAGCGGCCGGCCATGACTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCGCGACGACCTCGCCGCCGTCGAGGCCCAGGCAGCGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCCCATCACGAGCACGCGATTCAGACCTTCAGCCATGACTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCAGGAGCTTGCTGCGCGAGAGGCGAAGGCCCAGGAGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCTCCGGAAGGCGGGCGAGGTCGTGCAAGCCCTCCTGCCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGTCGGGCCAAGCAGGCTGGCGACCACCGCGTTGACCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCTCCCCGAACACGCGGGCAAAATCGGCCCCGTAGCGACGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGTCGGCGCACGCATCGCACTGGTAGCCGAGCTCGACCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCACGAGCATCGACGGCAACGGGGGGGCCGCTGGAGACCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGTGGGGACCATCGGCGGCTCCCCGGCGAGCGGAATGGTCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCAGGCGTGCCGTCGACCTCGAACCCGCAGCCTACGAGCCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCAGCCGCCCGTCGCCCTTGTACAGCTCCGCCGTGTTCCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCAAGAGGAACGGTACGTTTGTTGTTCCGTTCTACGCCCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCCGTGACCGGGGATGCGGCGGGCGAGCGCTTGACGGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGCGCGCGTGTCGTCGTCGCGCGGGCTGCCGCTCTGGGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCACCGAACTGCACGCACACTTCGGCAAGCCTGTCGTCCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCGGCTGACGCGCCTCGGGCGCCTCCGTCCCCTCGGGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGGCAGGTGCACGAGGCGAGCGTTCCAGTCCGCCACCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCCGTATCCGTTGCCGGATCCGTTGCCGTATCCGTTGCCCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCAGGGAGCACACGGGGACCTGGCGATGGCCCTGGCGCCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCGGCGTCTCGCCAGGGGGGTACGTCGGGGAGCCTGGGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCACCGTCCACCCGCTGAACCACGGAGACGGGTCTACGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCATGAGCCGGTCCCGGTACGCGCCGTCGGGCTCATCGATCACTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGAGAACACCGGCGAGGTCCAGAGCATCGCCAGCCCCGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCAACCGCGTGACGCGGGAGGAAGCGTCTTCGAGCATCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGGAGTATTCGCCAGCTCCGCGCGGCAAAGGTCTCTCCGTCCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCTCGCCAAGCTGGCCCTGCAGCTCCTCAAGCTGCAGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCAGCACCCTCTGCCCCGCCGGTTCCGGGTCCGTCTCGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCAGGTGATACTCGAAGATCCTCGGGCTTTGCACCCTCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCTGAGCAGCACGCGAGTGCGCGCCTGCTCGCGGACCACTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCCGGCAAACGGAGCCGGGCCCGCAGGTCCGTCATCTCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGTCGCGCTCGGGGTCGCCTCGGCGGGCGTCTCGTTCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCTTCAGGACCTCAAGAATTAGAGCCCTCATCCTATCCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCCCTTGGCGACGTCGACGGCGCGCCGCGCCTGCTCGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCCGCCGCCGTATCGGTATCCGTCGCCGTATCCGTTGCTCCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCCGGATGCCGCGTACGGGATCGTGGACATCGAGGACGCCCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGTGCTCGGGTTCTCGCCACGCCGGAAGAGCCGAAGCTCCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCTGGCCCCGGGCGAGCGATACGTGATCGCCGGCCCGGACTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCTGAGGAAGGCCGAGGCGAGCGGGGGCGAGGAGGCGTCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGGGCTGAACCGGGCGGCGGTTGCGGGGTGGCGCACCCACTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCCGTTCAAGGGCTGCACGGTGAGGCATTGATGACCACCCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCGCCCCCGGCGCCGCCTCTGCCACGCTGGACGGGCCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCATCCATGCCCGCCCGCTGGCGATGAGCCGGGACATCATCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCAGTGGGCGCACGGCTCGCATGGGCGCAGGTCGAGCGAGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGCTGGTCCTTGGCCGCCGTGAGCGAAAACGGCGAGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGCTGGTCCTTGGCCGCCGTGAGCGAAAACGGCGAGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC

>CP012670|6|4|420381-423904|PILER-CR
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CAGCTGCTCAGTCGCGTCACCGTCAGACGCGCTCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTCGTGGGGTCGAGCAGCTCCAGCGGATTTCGCCCCAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGTCGAGCTCGAGCGCATCAAGCGGCCGGCCATGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CGCGACGACCTCGCCGCCGTCGAGGCCCAGGCAGCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCCATCACGAGCACGCGATTCAGACCTTCAGCCATGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AGGAGCTTGCTGCGCGAGAGGCGAAGGCCCAGGAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCCGGAAGGCGGGCGAGGTCGTGCAAGCCCTCCTGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTCGGGCCAAGCAGGCTGGCGACCACCGCGTTGAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCCCCGAACACGCGGGCAAAATCGGCCCCGTAGCGACG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTCGGCGCACGCATCGCACTGGTAGCCGAGCTCGAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ACGAGCATCGACGGCAACGGGGGGGCCGCTGGAGAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTGGGGACCATCGGCGGCTCCCCGGCGAGCGGAATGGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CAGGCGTGCCGTCGACCTCGAACCCGCAGCCTACGAGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AGCCGCCCGTCGCCCTTGTACAGCTCCGCCGTGTTC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AAGAGGAACGGTACGTTTGTTGTTCCGTTCTACGCC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGTGACCGGGGATGCGGCGGGCGAGCGCTTGACGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GCGCGCGTGTCGTCGTCGCGCGGGCTGCCGCTCTGGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ACCGAACTGCACGCACACTTCGGCAAGCCTGTCGTC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CGGCTGACGCGCCTCGGGCGCCTCCGTCCCCTCGGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGCAGGTGCACGAGGCGAGCGTTCCAGTCCGCCAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGTATCCGTTGCCGGATCCGTTGCCGTATCCGTTGCC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AGGGAGCACACGGGGACCTGGCGATGGCCCTGGCGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CGGCGTCTCGCCAGGGGGGTACGTCGGGGAGCCTGGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ACCGTCCACCCGCTGAACCACGGAGACGGGTCTACG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ATGAGCCGGTCCCGGTACGCGCCGTCGGGCTCATCGATCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GAGAACACCGGCGAGGTCCAGAGCATCGCCAGCCCCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AACCGCGTGACGCGGGAGGAAGCGTCTTCGAGCAT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGAGTATTCGCCAGCTCCGCGCGGCAAAGGTCTCTCCGTC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTCGCCAAGCTGGCCCTGCAGCTCCTCAAGCTGCAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CAGCACCCTCTGCCCCGCCGGTTCCGGGTCCGTCTCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AGGTGATACTCGAAGATCCTCGGGCTTTGCACCCT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TGAGCAGCACGCGAGTGCGCGCCTGCTCGCGGACCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGGCAAACGGAGCCGGGCCCGCAGGTCCGTCATCT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTCGCGCTCGGGGTCGCCTCGGCGGGCGTCTCGTT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TTCAGGACCTCAAGAATTAGAGCCCTCATCCTATC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCCTTGGCGACGTCGACGGCGCGCCGCGCCTGCTCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGCCGCCGTATCGGTATCCGTCGCCGTATCCGTTGCTC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGGATGCCGCGTACGGGATCGTGGACATCGAGGACGCC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTGCTCGGGTTCTCGCCACGCCGGAAGAGCCGAAGCTC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTGGCCCCGGGCGAGCGATACGTGATCGCCGGCCCGGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTGAGGAAGGCCGAGGCGAGCGGGGGCGAGGAGGCGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGGCTGAACCGGGCGGCGGTTGCGGGGTGGCGCACCCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGTTCAAGGGCTGCACGGTGAGGCATTGATGACCACC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CGCCCCCGGCGCCGCCTCTGCCACGCTGGACGGGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CATCCATGCCCGCCCGCTGGCGATGAGCCGGGACATCAT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CAGTGGGCGCACGGCTCGCATGGGCGCAGGTCGAGCGAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GCTGGTCCTTGGCCGCCGTGAGCGAAAACGGCGAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GCTGGTCCTTGGCCGCCGTGAGCGAAAACGGCGAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC

>CP012670|6|6|420381-423904|CRISPRCasFinder
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CAGCTGCTCAGTCGCGTCACCGTCAGACGCGCTCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTCGTGGGGTCGAGCAGCTCCAGCGGATTTCGCCCCAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGTCGAGCTCGAGCGCATCAAGCGGCCGGCCATGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CGCGACGACCTCGCCGCCGTCGAGGCCCAGGCAGCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCCATCACGAGCACGCGATTCAGACCTTCAGCCATGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AGGAGCTTGCTGCGCGAGAGGCGAAGGCCCAGGAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCCGGAAGGCGGGCGAGGTCGTGCAAGCCCTCCTGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTCGGGCCAAGCAGGCTGGCGACCACCGCGTTGAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCCCCGAACACGCGGGCAAAATCGGCCCCGTAGCGACG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTCGGCGCACGCATCGCACTGGTAGCCGAGCTCGAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ACGAGCATCGACGGCAACGGGGGGGCCGCTGGAGAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTGGGGACCATCGGCGGCTCCCCGGCGAGCGGAATGGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CAGGCGTGCCGTCGACCTCGAACCCGCAGCCTACGAGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AGCCGCCCGTCGCCCTTGTACAGCTCCGCCGTGTTC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AAGAGGAACGGTACGTTTGTTGTTCCGTTCTACGCC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGTGACCGGGGATGCGGCGGGCGAGCGCTTGACGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GCGCGCGTGTCGTCGTCGCGCGGGCTGCCGCTCTGGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ACCGAACTGCACGCACACTTCGGCAAGCCTGTCGTC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CGGCTGACGCGCCTCGGGCGCCTCCGTCCCCTCGGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGCAGGTGCACGAGGCGAGCGTTCCAGTCCGCCAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGTATCCGTTGCCGGATCCGTTGCCGTATCCGTTGCC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AGGGAGCACACGGGGACCTGGCGATGGCCCTGGCGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CGGCGTCTCGCCAGGGGGGTACGTCGGGGAGCCTGGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ACCGTCCACCCGCTGAACCACGGAGACGGGTCTACG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ATGAGCCGGTCCCGGTACGCGCCGTCGGGCTCATCGATCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GAGAACACCGGCGAGGTCCAGAGCATCGCCAGCCCCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AACCGCGTGACGCGGGAGGAAGCGTCTTCGAGCAT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGAGTATTCGCCAGCTCCGCGCGGCAAAGGTCTCTCCGTC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTCGCCAAGCTGGCCCTGCAGCTCCTCAAGCTGCAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CAGCACCCTCTGCCCCGCCGGTTCCGGGTCCGTCTCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AGGTGATACTCGAAGATCCTCGGGCTTTGCACCCT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TGAGCAGCACGCGAGTGCGCGCCTGCTCGCGGACCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGGCAAACGGAGCCGGGCCCGCAGGTCCGTCATCT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTCGCGCTCGGGGTCGCCTCGGCGGGCGTCTCGTT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TTCAGGACCTCAAGAATTAGAGCCCTCATCCTATC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCCTTGGCGACGTCGACGGCGCGCCGCGCCTGCTCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGCCGCCGTATCGGTATCCGTCGCCGTATCCGTTGCTC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGGATGCCGCGTACGGGATCGTGGACATCGAGGACGCC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTGCTCGGGTTCTCGCCACGCCGGAAGAGCCGAAGCTC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTGGCCCCGGGCGAGCGATACGTGATCGCCGGCCCGGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTGAGGAAGGCCGAGGCGAGCGGGGGCGAGGAGGCGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGGCTGAACCGGGCGGCGGTTGCGGGGTGGCGCACCCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGTTCAAGGGCTGCACGGTGAGGCATTGATGACCACC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CGCCCCCGGCGCCGCCTCTGCCACGCTGGACGGGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CATCCATGCCCGCCCGCTGGCGATGAGCCGGGACATCAT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CAGTGGGCGCACGGCTCGCATGGGCGCAGGTCGAGCGAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GCTGGTCCTTGGCCGCCGTGAGCGAAAACGGCGAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GCTGGTCCTTGGCCGCCGTGAGCGAAAACGGCGAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC

>CP012670|6|4|420381-423904|CRT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CAGCTGCTCAGTCGCGTCACCGTCAGACGCGCTCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTCGTGGGGTCGAGCAGCTCCAGCGGATTTCGCCCCAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGTCGAGCTCGAGCGCATCAAGCGGCCGGCCATGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CGCGACGACCTCGCCGCCGTCGAGGCCCAGGCAGCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCCATCACGAGCACGCGATTCAGACCTTCAGCCATGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AGGAGCTTGCTGCGCGAGAGGCGAAGGCCCAGGAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCCGGAAGGCGGGCGAGGTCGTGCAAGCCCTCCTGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTCGGGCCAAGCAGGCTGGCGACCACCGCGTTGAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCCCCGAACACGCGGGCAAAATCGGCCCCGTAGCGACG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTCGGCGCACGCATCGCACTGGTAGCCGAGCTCGAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ACGAGCATCGACGGCAACGGGGGGGCCGCTGGAGAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTGGGGACCATCGGCGGCTCCCCGGCGAGCGGAATGGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CAGGCGTGCCGTCGACCTCGAACCCGCAGCCTACGAGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AGCCGCCCGTCGCCCTTGTACAGCTCCGCCGTGTTC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AAGAGGAACGGTACGTTTGTTGTTCCGTTCTACGCC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGTGACCGGGGATGCGGCGGGCGAGCGCTTGACGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GCGCGCGTGTCGTCGTCGCGCGGGCTGCCGCTCTGGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ACCGAACTGCACGCACACTTCGGCAAGCCTGTCGTC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CGGCTGACGCGCCTCGGGCGCCTCCGTCCCCTCGGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGCAGGTGCACGAGGCGAGCGTTCCAGTCCGCCAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGTATCCGTTGCCGGATCCGTTGCCGTATCCGTTGCC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AGGGAGCACACGGGGACCTGGCGATGGCCCTGGCGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CGGCGTCTCGCCAGGGGGGTACGTCGGGGAGCCTGGG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ACCGTCCACCCGCTGAACCACGGAGACGGGTCTACG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ATGAGCCGGTCCCGGTACGCGCCGTCGGGCTCATCGATCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GAGAACACCGGCGAGGTCCAGAGCATCGCCAGCCCCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AACCGCGTGACGCGGGAGGAAGCGTCTTCGAGCAT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGAGTATTCGCCAGCTCCGCGCGGCAAAGGTCTCTCCGTC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTCGCCAAGCTGGCCCTGCAGCTCCTCAAGCTGCAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CAGCACCCTCTGCCCCGCCGGTTCCGGGTCCGTCTCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AGGTGATACTCGAAGATCCTCGGGCTTTGCACCCT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TGAGCAGCACGCGAGTGCGCGCCTGCTCGCGGACCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGGCAAACGGAGCCGGGCCCGCAGGTCCGTCATCT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTCGCGCTCGGGGTCGCCTCGGCGGGCGTCTCGTT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TTCAGGACCTCAAGAATTAGAGCCCTCATCCTATC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCCTTGGCGACGTCGACGGCGCGCCGCGCCTGCTCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGCCGCCGTATCGGTATCCGTCGCCGTATCCGTTGCTC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGGATGCCGCGTACGGGATCGTGGACATCGAGGACGCC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTGCTCGGGTTCTCGCCACGCCGGAAGAGCCGAAGCTC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTGGCCCCGGGCGAGCGATACGTGATCGCCGGCCCGGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTGAGGAAGGCCGAGGCGAGCGGGGGCGAGGAGGCGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGGCTGAACCGGGCGGCGGTTGCGGGGTGGCGCACCCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CCGTTCAAGGGCTGCACGGTGAGGCATTGATGACCACC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CGCCCCCGGCGCCGCCTCTGCCACGCTGGACGGGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CATCCATGCCCGCCCGCTGGCGATGAGCCGGGACATCAT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CAGTGGGCGCACGGCTCGCATGGGCGCAGGTCGAGCGAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GCTGGTCCTTGGCCGCCGTGAGCGAAAACGGCGAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GCTGGTCCTTGGCCGCCGTGAGCGAAAACGGCGAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX19877.1\|432375_433230_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270916
CP012670.1\|AUX19879.1\|434400_436149_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|380122
CP012670.1\|AUX19872.1\|418850_419672_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX19878.1\|433361_434375_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|143390
CP012670.1\|AUX19882.1\|439222_440470_+\|uncharacterized-protein	cmr1gr7	COG1367_cmr1gr7_CAS-III-B	gnl\|CDD\|224286
CP012670.1\|AUX19867.1\|409571_412643_-\|hypothetical-protein	cas3	cd09696_cas3_CAS-I-U	gnl\|CDD\|187827
CP012670.1\|AUX19863.1\|405662_406655_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379276
CP012670.1\|AUX19869.1\|414326_415604_-\|CRISPR-associated-protein	cas7	cd09738_cas7_CAS-I-U	gnl\|CDD\|378223
CP012670.1\|AUX19864.1\|406651_407743_-\|molybdenum-cofactor-biosynthesis-protein-A	unknown	unknown	gnl\|CDD\|274250
CP012670.1\|AUX19874.1\|425261_428102_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|223039
CP012670.1\|AUX19870.1\|416301_418290_+\|CRISPR-associated-protein-Cas4	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187766
CP012670.1\|AUX19875.1\|427837_431263_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
CP012670.1\|AUX19881.1\|438050_439226_+\|uncharacterized-protein	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	gnl\|CDD\|370625
CP012670.1\|AUX19871.1\|418449_418740_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|378256
CP012670.1\|AUX19876.1\|431552_432353_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274375
CP012670.1\|AUX19868.1\|412635_414327_-\|hypothetical-protein	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl\|CDD\|274005
CP012670.1\|AUX19865.1\|407739_408486_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223609
CP012670.1\|AUX19880.1\|436203_438054_+\|uncharacterized-protein	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|187810
CP012670.1\|AUX19873.1\|424468_425092_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|99749
CP012670.1\|AUX19866.1\|408636_409575_-\|hypothetical-protein	cas8u1	mkCas0114_cas8u1_CAS-I-U	unknown

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX19881.1\|438050_439226_+\|uncharacterized-protein	gnl\|CDD\|370625	pfam09700, Cas_Cmr3, CRISPR-associated protein (Cas_Cmr3). CRISPR is a term for Clustered Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This highly divergent family, found in at least ten different archaeal and bacterial species, is represented by TM1793 from Thermotoga maritima.	7.79889e-66
CP012670.1\|AUX19879.1\|434400_436149_+\|uncharacterized-protein	gnl\|CDD\|380122	pfam18145, SAVED, SMODS-associated and fused to various effectors sensor domain. Predicted to function as a sensor domain, sensing nucleotides or nucleotide derivatives generated by SMODS and other nucleotide synthetase domains. The sensing of ligands by SAVED is predicted to activate effectors deployed by a class of conflict systems which are reliant on the on the production and sensing of the nucleotide second messengers.	0.000112389
CP012670.1\|AUX19877.1\|432375_433230_+\|hypothetical-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.08215e-76
CP012670.1\|AUX19878.1\|433361_434375_+\|hypothetical-protein	gnl\|CDD\|143390	cd05400, NT_2-5OAS_ClassI-CCAase, Nucleotidyltransferase (NT) domain of 2'5'-oligoadenylate (2-5A)synthetase (2-5OAS) and class I CCA-adding enzyme. In vertebrates, 2-5OASs are induced by interferon during the innate immune response to protect against RNA virus infections. In the presence of an RNA activator, 2-5OASs catalyze the oligomerization of ATP into 2-5A. 2-5A activates endoribonuclease L, which leads to degradation of the viral RNA. 2-5OASs are also implicated in cell growth control, differentiation, and apoptosis. This family includes human OAS1, -2, -3, and OASL. CCA-adding enzymes add the sequence [cytidine(C)-cytidine-adenosine (A)], one nucleotide at a time, onto the 3' end of tRNA, in a template-independent reaction. This class I group includes the archaeal Sulfolobus shibatae and Archeoglobus fulgidus CCA-adding enzymes. It belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, coordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this family.	7.00593e-09
CP012670.1\|AUX19882.1\|439222_440470_+\|uncharacterized-protein	gnl\|CDD\|224286	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	2.21663e-37
CP012670.1\|AUX19867.1\|409571_412643_-\|hypothetical-protein	gnl\|CDD\|187827	cd09696, Cas3_I, CRISPR/Cas system-associated protein Cas3; Distinct Cas3 family with HD domain fused to C-termus of Helicase domain. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; DNA helicase Cas3; This protein includes both DEAH and HD motifs; signature gene for Type I.	7.95149e-87
CP012670.1\|AUX19863.1\|405662_406655_-\|hypothetical-protein	gnl\|CDD\|379276	pfam13578, Methyltransf_24, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.00974e-21
CP012670.1\|AUX19869.1\|414326_415604_-\|CRISPR-associated-protein	gnl\|CDD\|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	1.2315e-58
CP012670.1\|AUX19864.1\|406651_407743_-\|molybdenum-cofactor-biosynthesis-protein-A	gnl\|CDD\|274250	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial. The model for this family describes molybdenum cofactor biosynthesis protein A, or MoaA, as found in bacteria. It does not include the family of probable functional equivalent proteins from the archaea. MoaA works together with MoaC to synthesize precursor Z from guanine. [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	2.1335e-10
CP012670.1\|AUX19874.1\|425261_428102_+\|uncharacterized-protein	gnl\|CDD\|223039	PHA03307, PHA03307, transcriptional regulator ICP4; Provisional.	0.00294477
CP012670.1\|AUX19870.1\|416301_418290_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.28093e-116
CP012670.1\|AUX19875.1\|427837_431263_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	8.35026e-86
CP012670.1\|AUX19871.1\|418449_418740_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	2.00229e-17
CP012670.1\|AUX19876.1\|431552_432353_+\|hypothetical-protein	gnl\|CDD\|274375	TIGR02984, Sig-70_plancto1, RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1. This group of sigma factors are members of the sigma-70 family (TIGR02937) and are apparently found only in the Planctomycetaceae family including the genuses Gemmata and Pirellula (in which seven sequences are found).	3.07929e-27
CP012670.1\|AUX19868.1\|412635_414327_-\|hypothetical-protein	gnl\|CDD\|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	4.12124e-44
CP012670.1\|AUX19865.1\|407739_408486_-\|hypothetical-protein	gnl\|CDD\|223609	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only].	1.23363e-07
CP012670.1\|AUX19880.1\|436203_438054_+\|uncharacterized-protein	gnl\|CDD\|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	1.65311e-55
CP012670.1\|AUX19873.1\|424468_425092_+\|hypothetical-protein	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.93901e-29

>CP012670.1|AUX19872.1|418850_419672_-|hypothetical-protein
MAKLTIGQKAERVLLLLLGLRKNKVAATLVAHGFSDDDLAEGWRLLQRVTRTRLGFVATAAATDSGLINELDAWENKWFPIASATLKRHAPEAHAFMFRNLGQTEGAAVLVSVSTFVERWENLARSKDKGGPDAGGEEGRKILARRGLTKAVIDEARELLARAGKLESVAEVAPAAAGDHDFEEAERQLWDWYLEWSTIVQTAIKDRRLLRELGFRRASSSRSSADAAAAEDEEAEEDTGGASHDDGADAEPAADPGAFLTGARPAAAARAGR
>CP012670.1|AUX19871.1|418449_418740_+|CRISPR-associated-endonuclease-Cas2
MRQSYIVSYDVCDPKRLRKIFKAMRGYGDWLQLSVWQCALSRRELVEMRRDLGQIIDARIDQVLIIDIGPANGRGRGAITSLGRAYVPSEQVAIVV
>CP012670.1|AUX19870.1|416301_418290_+|CRISPR-associated-protein-Cas4
MINEVLYCERLLYLEWAQGEFEDNVFTVEGRSVHRRADVAGGELPPPPAGAAPGAAEGHAGTTPSPVPGMPPASPMQPAAPEAARRGSARRALRDDDAAEPPPYEARSVWLSSERLGITARIDVVEGDASGRLLPIEYKRGHAPDVPGGAYLPERAQLCAHVLLLREHGYACDEAAIYFAASRRRVPIAIDEALVAATLAAAARAREVTGAACIPPPLVDSPKCNGCSLVGICLPDETNLLRRLAGEELDAPAEGLLAGVEAVEQGPDELEGPLEVDPWGLAGEASEASEASAASEVSAASEASAAAKPGEGDAAGETELRRLHPARDDRLPVYVQEQGARIGLAGERLVVHTRAGGRSEARLSNTSQVALLGNVQISTQAMRALLERGIPLCFMTYGGYYLGRATGLDSRNVELRVAQHRAAADEAFCLSFARGVVVSKIKNARTMLRRNHAAAEPAVLSELDQLARKAAEAPSLASLLGLEGTAARAYFGAFPGMLKGPDEVRGAFDLEGRNRRPPRDPVNALLSLAYALLAKDLAVTLGTVGLDPLLGFYHQPRFGRPALALDLMEEFRPIVADSVVVATINNGVVAPDDFQRHGDAVALRPAGRKKFLMAYERRMDQLVTHPVFGYRISYRRVLEVQARLLARVLLGEVEAYPSFRTR
>CP012670.1|AUX19869.1|414326_415604_-|CRISPR-associated-protein
MRSLDLDTLTHAVAGGAAALRAITRLEPAGGPGDKVFPPTYVKERNATTKYAMEPRRIDGREVNTVLLDSVASQANRFEESLLEGWRRGELPFPVVQVDFSKEEGLEDLEQITALQAPHRIADALLRDSVLGGAPFRHTTVGKDITDARPTHATAMFKYCPTALIFGVWDSTGPKGGLGAKFQRCLVSEIVGIDVALGVKTASRLDPAGIQTKAGPVFKHKDPSQDWTVDPKEAEIVKNKPVEFSRSGGGDGKKGSPSAINHGNIPPSIDSDAGGVTMSHAVQTTVLSLGALRRLRFQTACSGERLPAEQRDAAETAARTALAALALAGIVYQRDQGYDLRSRSILVAKEPLVLELLGRDGGEPERFSLSRAEAVALLQGAEQKAREHGLGWDPKPITLTPAPKLVGLIRKSREVAASGEAEGDS
>CP012670.1|AUX19868.1|412635_414327_-|hypothetical-protein
MLAFEVALLTGRYVATAVDDRGRAEWPPHPARLFSALVAAHFEALDRSEAERAALEWLERQGPPEITAPEAAAREVVTVFVPVNDTSVVGSLDDEALLVREARAALDAAREKGGKALAAAEKKLAKAEARFEDAVRKALARAPAGKEGKDGPARAASLLPERRTRQPRTFPSSAPAELGSAAPPLVFAWPSADPTPEQRATLDALAARVTRLGHSASLVSVRLRDDRPEATWIPDDVGRGRAGDEAVLRVVGPGQIEALCAAFELQADAPGRVMPASFQRYVRPRAAGEASAPAPRFGDGWIVLRRVAGPRLPSIRGVDVARTVRKAMMAAYGPGAPEILSGHRASGGPSERPHLAYVPLPFVGSEHADGAILGVALILPRDATREERLAVYRALDAWERQRREDDEERPRLPVHLGRAGELVLERLEEHALQSTLRPATWCAEAVSWASATPVALDRNPGDLGARDPRREAAAYAEAEETVATACERIGLPRPARVTVTPAAPLAGAEKARYFPPFQAGSPPLQRVLVHARLTFDAPVRGPILLGAGRYFGLGLFRPLREHG
>CP012670.1|AUX19867.1|409571_412643_-|hypothetical-protein
MADLSLDDFAAYFDAVHGATAAPGGRATPFPWQERLLAEVARVGEWPALLDLPTGTGKTAAIDVAIFHLALDAASPPAQRKAPRRIVMVVDRRTIVDQAFERAKAIARALRGARDGVLRAVADRLRALADLREGEAPLALAQLRGGMPRDDAWAQRPDQPLVAVSTVDQVGSRLLFRGYGVSDVMRPIHAGLLGNDTLLLLDEVHLSRPFRDTLRSLRRYRTRASSKLPDRWHLVEMSATPGSPPAISGGTSATPATPDDERVFGLNDDDLRNERLAMRLRAKKPVVRHEVKVSGGEDARRAAFAEACADHALRFVAPGRAVGVIVNRVATAREAAAILRKRVGDSADVFLVTGRMRPLDRDDLDGKLGPLVRSGRVRSAAARPVVVVATQCIEAGADFDLDAIVTECASLDALRQRFGRLDRLGALELAPHDVRGVVLVRSDAMTKDHVDPVYGKALAETWTWIGEGTRDFGIQAIAAALPEGEALDAMLSPKSRAPVMLPAHLDLWVQTRPSPVIDPDVSLWLHGIDQRQAPEVQVVWRADVTEALLEQAMEDEETREALLKRVEACTPVGLEALSMPIHAVRAWLQGGTGPDLADVEGRTVGEDDRKPRIERLALAWKGDESRVINPRELHAGSTIVVPSTYGGLAEGTWDPSSHEPVSDLGDRARWQQTGRPTLRLHPELLRQHADVLDRAWPEAPVPVEEEGSDVEDREVVDAWLSQMSEAIDAWLSQSNAKATGASWLGGVVKALAEQGRKRPALLRLDGIARLGAGGGLERGYFALVGRVRAHAEGVGDVTTEDDGASHTGVEVTLREHLGGVAAWAERFAEQCGLPPEVVRDVELAARWHDAGKVDPRFQRMLHGGSELRAAVAAEPLAKSAIVAADRAARARARERSGYPRGARHELSSVALLEARPSLLDGAKDPDLVLHLVGSHHGWCRPLAPVVDDPEPVELAFDAGGTVVSVSSDHGVPRLDSGIAERFWRLVERYGWFGLAWLEAILRLADHRRSEEEQRGEIEARDER
>CP012670.1|AUX19866.1|408636_409575_-|hypothetical-protein
MTELLLTGLDGKNPLAFLSALGVLNALADRAKEGQPEPRLLWRAGGTYRPAIVGGPDRNALLDALVHDLESFRGEPAIERLRYRKDGNGAEAHDLKPPPGFFADYLSGLVREDRRRSLDFAAAFATDVAVDNNGNTKPTALHFTAGQQEFLGMVSELTQGVRVEDLEEALFGPWRYERPLPVLQWDNTSARDYALRASDPSKDKKLGVPGADWLAFRGLPFIRVAPVGDRIVTTGCSGEWKTGTFRWPIWTVPLPRSVIGSVLTSPELVEVDPSVLRARGIAIVLESAIRRSDQGGYGSFAPARMARPARGD
>CP012670.1|AUX19865.1|407739_408486_-|hypothetical-protein
MRTATRPQNATLTGTLPLDRPTAERPRRLYVATSNHCNRACPWCCTCSSPKGQTFLALDRYRASFPAEGPFEVQLEGGEPTIHPHFDEMVRLARVEPRCARVVVVTNGVELPREPAGLDAWLEKLGEPTTIKLSVNHHLLEHDGGLLDLARALRERLAALGGDRQLVLNVRLRKTEPDGDAWVAQAVRDAGLIELANVFHLQRYGFAQKREDWDEPFLVGTHFTMLNPDGGAFGPDLVARSDAMRRLP
>CP012670.1|AUX19864.1|406651_407743_-|molybdenum-cofactor-biosynthesis-protein-A
MSARPFRDEWRRLKSRAFDLTGNSTAGATVRFDLWGRPVEVYRNANFSIYSRQPCNAKCHFCVEELRPASRGRSLAVQKTVEEDDGRYFDAMAESLDALRPLDPTVSITGGEPSHDPRLPRILALGQARRCRKRTLTTNGSGLLQQREGKRVIDWIVETGVQHLNISRAHPDHDTNARLMVMKDGLSVDELRRVVAAAAAGGTRVRLSCVLLQGQIDAVEPIVAYLRFARSLGVDNVIFRQLMKTDPAAVVENHVVKYSDRARVRLEPILDALSADARFSFERQIVGYYYYVEVFRFEDIDVVFEEADLAQLEETKRSGPGIVHELIFHPNARLASTWQPWDGILGPPTPPTTTTARAAQDAS
>CP012670.1|AUX19863.1|405662_406655_-|hypothetical-protein
MTPPIIPLPYIGRNLLFLEEALDELEARGITSPLLFRASEADKLARLLEHGTDRAGYPGERPWTDGPAQGRPIRHEDVIFATTADEIRRGEREPERSTSLKKFAVIARPLFVAYDARCFVKLCDRQYEYGDPARKPAALLALFPVTRVDPVQGWFSEEAGLAYRALVRSIHGGAMVEVGSWKGLSTAYVGRLAARRGVALHCVDAWEGSSDAYAARYSALLAAEDVPGAFEANMEALGLRPIVHRLASTDAAARFAEASLDLVFLDASHDAAAVLADLEAWWPRLKPGAILAGHDHNEEHAGVLEAVARFAARAGRAVEVGGGSVWWTRR
>CP012670.1|AUX19873.1|424468_425092_+|hypothetical-protein
MPIAEKLVRPATLEDLEKLPLTWRGEIIDGTLYAFRRPRFVHADIEGLITADLKNPFQRGRGGPGGWWILPEPGIQLPRAPELSPDVAGWRRERMARPPARESAIAVVPDWICEILSRSTASYDNLVKRRFYSEIGVGWLWVVDPRDRSLRVSQLVDGKWVELGLYGEDEKVRAAPFEAVEIDLSEGWEGLDDDNQNENEGKGEASP
>CP012670.1|AUX19874.1|425261_428102_+|uncharacterized-protein
MRGRRREATLDLARRLDRVRVRARPDGAVRSNAAAATLGGETQEPLMPIAMCATLDTRHAAGTDLVFSVSLALAWKKLEHRFGALRFAPQPALADALSRTVVDGAVSPAWCVADAGFGAEGILERLRSELLSRFSAADVRYLPRGLAPDALLAYGYLSRDLRFPVVFAVREGVFDARPVRAFGIVDNNHPHNAARAAQVIVHEHRSEREFVIELCTDAADEDRLLIAQVPPRERLGETVRDVLDRLGRLPPEYRSLRRGSARVTARGRPRGWPASWRTTAWRAHRGDPLARPPGSTSRCVASAELRARDASSDDQENRACPPRFHGSTRNEERGGVTRAQVLVELRAGNPVPDMPQEERGSRRAGQEEMDFSGSRLTHLLAHRLPRRERPPHRPCCIGDRRRARRRGRRDRDEAPDGRHAATQVSQDILGDVAGCAQRHRQLVPVSEIHGRGDMDGEISGRHVAGPALAALHACHPHVARVAERDARREPRRQPHVPSYEHPVEPERPDALLGRLQLREQASVPVPRITELPARAGMIPLEKIDPVEALRRAGGPGIASERLDHHGRLPRLAAQPAARDLREQRLSVHLAPSAGHPRTDRLNTLLHRQLIAPEPHRGHAIRDARDKARPPRLACEQDEMIEHLDQVGLRHAEVARPALAPAPGLRARRGQPQPRAEGAGAPVLQGQHLVGHIERPVGIEAHPGSLPAPRQRLPALPEPLQRALAARGRRRDPPGVVDRTPPVHRVLHLVVLVGGTPAAHHDVIHVARVLRLDLDAGDVPRRAQRPQGVVPGEEVLVVVSLERGSSSAEAHLVMPSGDLAASLQRRTCGGKRASPTSAPAPPAPALVSSDAPPLDSAIRPWTSPRTGSVPIGSSGPSAAAASGASSPRSTSTWARRSRSSSSRRNRPETPGAWRASSRSRAPSPSSITRASCGSCTATSSRTAPPTS
>CP012670.1|AUX19875.1|427837_431263_+|serine/threonine-protein-kinase
MDLPADRIGPYRLLRPIGRGGVGRVFAAVHQHMGQEVALKLLSEESAGDPRRVARFIQESRALAQLHHPGIVRVLHCDKLEDGTAYLVMEYLEGGTLRAWIQRQNGPAPLDAALGICRQIADAMVEVHARGIVHRDLKPENVLLVPDEASPLGLRPKILDFGVAKMPPPASEERADTHVQTAAHDFLGTSAYMAPEQCKNTAEVTDRADVYALGVVLFELIAGRRPFASSDDVELLYHHVHADPPHLDELVPSVPPALSSFVSSMLAKAPKERPAMIRCQDMLARPWKGEKNECPFPGLQPFTEAQAELFFGRDADVRELLGRIEALREGESVRWLQIEGPSGTGKSSLVQAGLLPRLAQRPPGAAPWIIATLRPSDDPIKSLAAAIASVVAAHDPATTPAEIEAALRSESDALGALLARALPEGATLLLVVEQLEELFALGGVDLHHVDALLSSCLSDQRSPLRLLTTLRSDYLHRLEQAPGLARLLNSKASRYHLGPMDEEALAQVIRGMAARAGLRLSERLPERMVRDAAGTDGRLPLLGHTLRGLWASRAAATLTHEHYEQIGGVSGALARHAALLLDGLGEQGRERAKWLILDLVQVGRGAPDTRRPRTRGEVLAAAGGDRLADEVLMRLSGMPAGKATAAAFESLRLVVIAADPPAEPSRQRVDLVHEALLQRVPAIVGWIEAERALLERHADIEAAAHKWEQSGRADDWLPGGSLLDHYRGRIGAPSHPERLLRMASERARAFLGKAEQVERRRRRARRARGVIAGAVAIVVLAIALWGWTERERAADNRLRIVQATREVGSLDWRLGRLLYTSSIRAALLAELDGSLSSLSQEDRDVPEVVDAFVRTKHRRSDFARYNESLSASYAFVAQAEERIRFGLARDPSSDELLMQLAWNHSKRGKLELAYGRVERAREEFARSVATLKAMRAIESSDYRRTLATSTSEQADVELQLGHVQVAVALYDEALRWLQQNAGPGDDGSRYDKALIALTASARGDALRRAGELRPAATSVEEAHEAVGALVRSEPGNAFYRWILGKTQVALAAVRADEQRTAEASRLYDEATGNGEALHLGDSTQKEYALLLCQGLQGVEELASGRGDGGRAAAARSQRCEIAAQFVVRDPDDVRFQRLACR
>CP012670.1|AUX19876.1|431552_432353_+|hypothetical-protein
MSHDVPSVEELIARARAGDQDAIERLFTWCAPLLNKWVLRRMADRQPGTAGRSDIRQEVAERAFLAFPSFKGTSEAEWVSWLQRIVETCTAQSFRDAGRMKRNKTAEMPLDEADEIPTQGMSPSQTTAAGEQWHELLVQMSKLPEDQQQAIYLCHVQELRVAEAAERMGKTEAAIAGLLQRGLKALRERLADDPEPGALPAGARPAGQAQDEAAAAFRAYLRRRDAGERVDAGAFIAEHPACADELRRMLECIERLPSMRSAGPRE
>CP012670.1|AUX19877.1|432375_433230_+|hypothetical-protein
MLAPGARVESYEVVSLVDIGAMCHVYEARSEDGARTVALKVLHEAWCADETIVARFVNEASLLRRIQHPHIVPLLASGTLPAGTPYMVLEWLPSNLARALADAEGGLLPRVAARLASQIGAALVVLHSHGIVHRDLKPDNVLLDGGDLAGARVRLADLGLAKIRADPRSQELALGHVSTGGSALLGTWDYMAPEQWIKPKDAGPPADVYALGVLLFQMLAGRLPFVAEQPKHLMALHLFESPPMQRIDERTPPALRALVGRMLGKVPGARPTMREVVGDLGSVV
>CP012670.1|AUX19878.1|433361_434375_+|hypothetical-protein
MADIQKYFVQFDEAIRFDRDVEKAALAEKRERILRKLSEGIKRQRVEGTTIPSYEPFNQGSYAMNLGVKPVDGDFDLDVGLRFDLSKADYPDPVVVKGWVHRALDGHTRKVEVRRSCVTVFYQEGGEDIYHVDLAIYSSGKRNADGKDYIAKGKPGQRADERRWEPSDPQELQNVIVSGRSGENAQQFRRVIRALKRWKELRLSPQHGRKAPKGIALTVAAHHWFEVSVKKDVFGKAIGYDDLGALKSLVTQMLSRFETVWSAEERRSVVRLRILHPVSRDYDFCSNMSSASMLGFKERLEALLAALNTALGAQEPRAACQALREQLGDDFPLPEGR
>CP012670.1|AUX19879.1|434400_436149_+|uncharacterized-protein
MANSELHILIVVDLYPAVSAAELRETLPHEREDRRTLVLTEFGAPRLAPPPDASPIDWPGVGRAVEMLVAEVRAIRGDRPTVLFIGGRGPLAVFVHLGYLLSKFGGRQVVINQPPGGGRWEHFPMETAAGDGPALLDVLAGLPAEEVPSSGRVGIYVDTAGRDTSRDVFRDFIKEEGDHVAGVVKLRSSAPLRLTPEHVPALVLQLTQFFSQAPTRYPDRSGLSLFVGGPAQVAFAVGRAVNPWVVGKDIWLTEYRAPSYERVYSLPFNPRTEPEIPRGAEDVNARRDVLDAMAAAIDELKRHMKAEHLPADVLSASDRKKFIDRLARLERSTDSKKDSAFRLRVIEGHYALGEGIAEALRRSTVPEQQGFAKLLILHELLHDWQALRSTNYSAVGGAGFVLEQVDYAADAFAVRALMKMELDRGGDAARDEVRARLERWLDMVLRGIAAFDIMAQGATKMARLDERRLRRYLMWHLQLARAATIREPSHVDEMLRPPLTVELAPLAGRLDTERYEKVVNRALPDTELFCAIGGRLVRQARRPGFDPGALVEAVKSYARELIQQAMVFLVDEHRGKLAPWIA
>CP012670.1|AUX19880.1|436203_438054_+|uncharacterized-protein
MPEHLLVVALGPAHESLQEFISRARRCHDLWFGSWFVAALSKALARGIAEAIGPGGHEALLFPAPASVEELAPASSLTVANKVLALVPGDRDPVDVARSGVRAFEQARDRWTAEIFGRVGRDDPRRLENFHERAARAQVAELFETSWVAVPLGGGFPAARVEAERMLAARKRTRAFRQPSWAREGVPKSSLDGLRDAVLDERIYEKPVTGRARPAALGSDERRRFYDVHGSERLCGVGLLKRFGRRVNDEAERIPSTNHLSTLPFLRGLDRDQARQDAVRRAWRDYRAALEDAGVLDEFQDAPPLLRSDLLGRIDGGVLYPGRVREALEDADASEATRRFVEERRRALLKCAGRDEPSAYYGILVADGDSMGDLIAILETPGEQRRLSATLARFARERVPAIVQEGEGALLYAGGDDVLALLPLHTAPTTAMRVAQAFREELAPWATAERVPSMSAGLAVVHSWSPLEEGLDAARDAEVRAKARYNGARDRKNALAIAVHKRSGQPLTVCDRWDALVPRLQRIVDLQVEDELPGTMIEELAALERLALGLRGEAQDRARAVQRVEARRILGRKDIRSAVLDELGGWIEKGEIDGPALGREVAVARVFARAAKEAQG
>CP012670.1|AUX19881.1|438050_439226_+|uncharacterized-protein
MSVWTIEPRDPLVVRDGRPNQGRSESAARAFPLPSTIAGVVRTRLGLGIDGVFARTSADELAALRAVAVRGPWLVEPDTGTVYAPTPADLALLADAERRTIAALSPAPMAAPLLADEGLPGELVPVWAHRHEREGKAKGPPAFLRWDAFARWLARPGRRAGEDADSILQGAIDALPRESRLHVQVGEHATAEDGMLFETEGLRFVHPDTRAPLALAVEVDDAAAAKVGSLREGLAPMGGKRRLVRWTRATRPLPEVPEPVLNRAGLGDTGSRVRVLLLTPALFDEGWRPRLSPGAPLGPAEGVTGVRLVAACVGRPLAISGWDLAKQQPKRIRRAVPAGSVYWLELTGPPAARRAWVQRVWAKAVSDAEEDRRDGFGVAAIGNVLEEGGAA
>CP012670.1|AUX19882.1|439222_440470_+|uncharacterized-protein
MRKEPGRAPSAVPRERMAPEIIDEVRTYEFLTPVFGGGVKVEGQHKHADPVTPVRAASIRGQLRFWWRACNPRGCQDVEALRAAEAEVFGSTAEPSRLTVEVVTQPVAYARVDVLAGKFEAVQGMAEIAYGAFPLRAEARSGAGTHGVLHQFSGPWQVRLRYPSGAQRDVAAALWALAHLGGLGGRTRRGFGAVAEVQQGSTPRSSLEEGWASHVRGLQVPWPHLPASTEAARALVVRREPHWQTGLAAQKFLLGKLRELRQGAVGRRGGGSRKAGRSFWPEPDEIRRLTKRAHPNHQPEHPVHAFPRAAFGLPIIFQFKDEKGGEPAQTTLVPRGYNRWGSPLVLRPHRGPAGIEALAFLLDPRVPDELELRGKRERDRWQVKRGLSADGARKTSPMGAKAIDPLDRFLEFFNE

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Crispr_ID: CP012670_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_7

499103-499204

Orphan

Consensus_repeat	Method
GCGGTGACCGCGCCCGCGCGGGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_7

>merge|CP012670|7|499103-499204|CRISPRCasFinder
GGAGTGATCGCGCCCTCGCGGTGACCGCGCCCGCGCGGGAGGCCCGCGCGCTCCCGCCGCGCCCTCGCAAGGGGGGCGGCGGTGGCCGCGCCCGCGCGGGAG

>CP012670|7|7|499103-499204|CRISPRCasFinder
GGAGTGATCGCGCCCTCGCGGTGA	CCGCGCCCGCGCGGGAGGCCCGCGCGCTCCCGCCGCGCCCTCGCAAGGGGGGCG
GCGGTGGCCGCGCCCGCGCGGGAG

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX19933.1\|511281_512976_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380294
CP012670.1\|AUX19922.1\|490522_491686_+\|hydrolase	unknown	unknown	gnl\|CDD\|366166
CP012670.1\|AUX19918.1\|483339_483738_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX19926.1\|500453_500999_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|197617
CP012670.1\|AUX19923.1\|492518_496688_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|225750
CP012670.1\|AUX19927.1\|500995_504316_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
CP012670.1\|AUX19914.1\|477335_477800_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|99778
CP012670.1\|AUX19925.1\|499229_500450_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234945
CP012670.1\|AUX19917.1\|481167_483012_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|225750
CP012670.1\|AUX19916.1\|479097_481164_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|274730
CP012670.1\|AUX19934.1\|513144_514953_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|182554
CP012670.1\|AUX19931.1\|507177_508917_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379285
CP012670.1\|AUX19915.1\|477823_479101_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX19930.1\|506707_507064_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369571
CP012670.1\|AUX19928.1\|504520_505348_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX19921.1\|489277_490222_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234994
CP012670.1\|AUX19932.1\|510751_511333_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX19920.1\|484540_489265_-\|protein-kinase	unknown	unknown	gnl\|CDD\|225114
CP012670.1\|AUX19929.1\|505782_506496_-\|oxidoreductase	unknown	unknown	gnl\|CDD\|239267
CP012670.1\|AUX19919.1\|483849_484440_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|99749

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX19926.1\|500453_500999_+\|uncharacterized-protein	gnl\|CDD\|197617	smart00271, DnaJ, DnaJ molecular chaperone homology domain.	4.77584e-11
CP012670.1\|AUX19933.1\|511281_512976_-\|hypothetical-protein	gnl\|CDD\|380294	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated BREX (bacteriophage exclusion) type 1 systems. The phage resistance appears not to be through restriction-modification, as phage DNA appears not to get degraded, but it does manage to inhibit phage replication.	4.81213e-11
CP012670.1\|AUX19934.1\|513144_514953_+\|uncharacterized-protein	gnl\|CDD\|182554	PRK10565, PRK10565, putative carbohydrate kinase; Provisional.	6.92351e-75
CP012670.1\|AUX19923.1\|492518_496688_-\|uncharacterized-protein	gnl\|CDD\|225750	COG3209, RhsA, Rhs family protein [Cell envelope biogenesis, outer membrane].	5.6969e-29
CP012670.1\|AUX19927.1\|500995_504316_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.55251e-89
CP012670.1\|AUX19914.1\|477335_477800_-\|uncharacterized-protein	gnl\|CDD\|99778	cd00322, FNR_like, Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I. FNR transfers electrons from reduced ferredoxin to FAD (forming FADH2 via a semiquinone intermediate) and then transfers a hydride ion to convert NADP+ to NADPH. FNR has since been shown to utilize a variety of electron acceptors and donors and has a variety of physiological functions including nitrogen assimilation, dinitrogen fixation, steroid hydroxylation, fatty acid metabolism, oxygenase activity, and methane assimilation in many organisms. FNR has an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) flavin sub-domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal moeity may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Because flavins such as FAD can exist in oxidized, semiquinone (one- electron reduced), or fully reduced hydroquinone forms, FNR can interact with one and 2 electron carriers. FNR has a strong preference for NADP(H) vs NAD(H).	2.52804e-09
CP012670.1\|AUX19925.1\|499229_500450_+\|hypothetical-protein	gnl\|CDD\|234945	PRK01346, PRK01346, enhanced intracellular survival protein Eis.	7.19973e-127
CP012670.1\|AUX19917.1\|481167_483012_-\|uncharacterized-protein	gnl\|CDD\|225750	COG3209, RhsA, Rhs family protein [Cell envelope biogenesis, outer membrane].	1.2892e-10
CP012670.1\|AUX19916.1\|479097_481164_-\|uncharacterized-protein	gnl\|CDD\|274730	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain. This model represents a conserved unique core sequence shared by large numbers of proteins. It is occasional in the Archaea Methanosarcina barkeri) but common in bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats are abundant: an FG-GAP repeat (pfam01839) class, and an RHS repeat (pfam05593) or YD repeat (TIGR01643). This class includes secreted bacterial insecticidal toxins and intercellular signalling proteins such as the teneurins in animals. The other class consists of uncharacterized proteins shorter than 400 amino acids, where this core domain of about 75 amino acids tends to occur in the N-terminal half. Over twenty such proteins are found in Pseudomonas putida alone; little sequence similarity or repeat structure is found among these proteins outside the region modeled by this domain.	3.84611e-20
CP012670.1\|AUX19931.1\|507177_508917_-\|hypothetical-protein	gnl\|CDD\|379285	pfam13598, DUF4139, Domain of unknown function (DUF4139). This family is usually found at the C-terminus of proteins.	3.70499e-58
CP012670.1\|AUX19930.1\|506707_507064_-\|hypothetical-protein	gnl\|CDD\|369571	pfam07883, Cupin_2, Cupin domain. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel).	8.38266e-16
CP012670.1\|AUX19929.1\|505782_506496_-\|oxidoreductase	gnl\|CDD\|239267	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.	3.1695e-51
CP012670.1\|AUX19921.1\|489277_490222_-\|hypothetical-protein	gnl\|CDD\|234994	PRK01973, PRK01973, septum site-determining protein MinC.	0.00640869
CP012670.1\|AUX19922.1\|490522_491686_+\|hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	4.13222e-20
CP012670.1\|AUX19920.1\|484540_489265_-\|protein-kinase	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	2.79017e-120
CP012670.1\|AUX19919.1\|483849_484440_+\|hypothetical-protein	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	5.48364e-31

>CP012670.1|AUX19923.1|492518_496688_-|uncharacterized-protein
MGKVTALSLDTVHEGSGHQMTGMAVSVCTTPAAPSPLPIPYPTMGTVAEGVIDAPMRTKIEGKKILTVGGCMKACHGNEPGTLKETLSLNTGGPCFPWLGAPNVLIELGMAGITGSMGQMNKSVTAGAGTSAGGAGGAGGTGGGGGGGGAGAPGGGGPSAPGGGGGAGGGGSHKGAKAGKSSSPPLEECTTEGHPVDVTSGAVVDAAVDIAAPGMIPLVWARHYSSARHEERDGAFGPGWASSCEQWIEEGDEVLALRDGEGRWIWFEKVGPGETTFHRRERLELHRDGAREFRVVALDARHVRVFAAEGDGTRARLRAIRDVHGNEIRLEHEGERLVRIVDTAGRELKVRWEEGRITRLELWAERRLEQWVEYRYGDAGCLSAAIDAVGGVERYDYDVRHRMTSATLKNGERFWYAYEDRHGSRCRKTGGNDGLHEVELCRDARARTTEVRGEEPRVYTWNADGLVTRAALPDGTVLWERAYDEDARLVAEVNGAGEGVQRWYDARGNLIREVDALGNEMRWEVEGDLVVRQISPEGHVTQVIRDARGEVSAVLFPTGEAYAFARDAHGRVTGIHGHGGGHGGLLFGYEHDARHNVIAETDARGARTTYAHDGMGRPVSQTDALGRTTRVAYDRMGRPIRVERPDGTRTVATYDRMGNPVRLVDALGQTTQLAYQGTGVLAQVVEPGGGVWRFEYTKKERLQVVINPRGEEYVFRYDDAGRVGQEDTFDGRTLRYGYRSSGRLGRIEHRADKTWRNLFHDRAGNLIGDETPDGVIGYARDRMGRLMGAVLEEASGQRVETWFERDAFGRVVCERQGDQAVRYAHDARGRRVERVMPDGARTRYAYDALDALSAIEHDAHRMVFERDVLGREIQRTSAKAGEDGAAGIAVRSAYDAMDRLIEQRATAPAPGVPKVLVARQWLYDARGRVERIDDARWGATAYRYDRVDRLLSAQRGERREVFTYDPAGSITRMLEELAERGGAGVLAQAQPAQDWMQPSWRIERGGVLRRTEAAAYEVDARGRRTAKVELSRYRENHPNGGAATEQDLTRYTWDCRDRLREMRLPDGTRVVMTYDAFGRRIRKEVIGAALVGRPRVVDFVWDGDELAAEVDRERGARTFVHALGTFVPLLQQQDGRVLTYVNDHLGTPKELLDPGGLVAWAVAHSAWGKVVEVQRDPISALNHKTPVESPFRLLGQYADEETGLCYTRFRFFDPDSGGWCSPDPIRLLGGLNLFAWDGDPVNSADPLGLAALCGKRKERANKVREKITSDMKNPDKRPRTNVGSHAHFDETTTKDILANPDAVYLSEGKSGRMIFRKGNNIVVVEGPGSSQGTVVTGYGPAGNKNASGAAALGGLPTDQGAPVTHDQITSGTIPSASGMPIPKAEQIWP
>CP012670.1|AUX19922.1|490522_491686_+|hydrolase
MILHQSQVEQTVDRDERDRFIKELVVVRVRSTAPEIAPASRGIEGARAPGVEEPAVDRELVAREVPLAMIRKRSARLRGTVGSVLLIHGYGQNRYIWHLPARSFSNYLARAGFDVFNLDLRGHGRSRHLGARRPGHVTDFVREDVPAAIEEIRRISGPRPVYLIGHSLGGLVSYATAPTMGDAVGGIVTLGSPYLFTHGSRVLSLLGRLMLTVDRRVPLGQGAVPLSAWGEPFRLVRAFVESPIFPLPIRGFVPGSMETRVLTQHMSLAMDSGSITVLRNMFLDAAASRKSGHHMGSLFGYAERFEKMDLPLLVIAGALDDLAPPASVKPAYDFSRSSDRTYREFPRGHLDIVVGRDAPLTVWPLIEAWLKTRIRRAAAREPERLSA
>CP012670.1|AUX19921.1|489277_490222_-|hypothetical-protein
MYHCKRSRRLAAGVHARSAALAASLGVLCFASSARAQLPDDSGPDDPRAAEEQAGGEAAQGDAAPAASEEKPKAPEAEAKAEPAADNAPLEKNGKAYRFIGLRFRNVIVPKFMINLFADGGATVNVFTAGPELTTRKDGFEIDLAMSYADYSMDPFLFKGKNDGDDAWEMVSSDMKLLYLTMDLLHEIPLDPEEGRFSLLIGGGVGLGVVFGNLYRAQAYPSDARANPDDVGSWSRCTGPGAPNAFYCDAQHRHYGDYDEPSWINGGSKPSVFPWISFPQVSFRYKPIKQLQTRLDAGLSITGFFFGLSAGYGI
>CP012670.1|AUX19920.1|484540_489265_-|protein-kinase
MSRDSVSRGSVTPQPLFPPRYAPIGTLGKGGGGEVWAVRDRITGKTVALKTLGEDADEPEVLALVREAAALSGVEGLGVPRVLRFGRLPGSGRPFLVRELVEGTSLADRLAQKGDLERNLAAIADTADQLTRLHRALVLHGDVKPANIIVGEGGRATLVDLGLSAPFRDNGSRPVGLTPRYAAPELFQGDPLTVRAEVFALGATLAEALRESGGERDPEVVEALRAVVERATERDPIARYPSADELANALRRAARLPRAPDEEAAASCEARERPEADAVVWPIVGLDAPSARLHAQITALGAGGELAIVGPPGSGRSALLRRVAWSLEVGGDAVAWIEAGSVADPREALAIELSGHDLGRVTALVDDADRLGPAALERLDEVREAGGKLVLVVRAQAAGAGAAGAGAADVLAGRAPEIFAMEPLEEQAARELVQRTIPSLSDAVAAHVVARAGRWPGRIREIVRRIARAPVASTDDVDALLDAPPSSGGAAASPGGAEGASMPPAEIHRLLDRGHFGAAAEALERCQGDGAPAVVIARARLAMNRGDPARALAELHRVKDEVEASGDRAQAAFWSLQMARALVRAGDYGEAERRAGEAAERVGPIRIEAELAAEPAARPAPAGAFGASPEAILAEAVAMRGLAQSFASRHEEAKRTLEQAVRLARLTGEPRILSVALVSLAFALQRDDRLSEAKAAYEEALSAAEQAGDAGTLTTTRLNLAGIAKLQGDLAAAIRHLEAAVDLGQRSGRVATLRQALLNLSNLDLYLGRLARARVSIDALAAQRADLAPQQHAQLLALEAEHAARSGDLERAERLCLECAEAYEAMGRRVDAVEARLERVLFAVARPGADTRALGEEIDAAAARLGSTGAHRALLALARGRVAALARDEQRARAAYDEALEAARAAGQRDWIWRALEARAQLEAERGHLVRARHDREEALITLEEIASKLPRDLREVFWNDARRKEIRAAAMLDLMSGRTVPFTQSAGPPGEDRLARVLEINRAIAGEHDLGRLLAKVTDHAIALLSAERGFIILQRPPRDEQRPPRDEPPPPRDEPQPAAGEGEGAVDLSIHASRDQAGDDPHARFSSSIAERVISTGEPVVTASARDDARMSDYVSVHQLMLQSVACVPIRVRSGQVIGALYLETRLRPAAKFEAELPTLTALSDQIAIAIETARLVSENERRARELERANEELRAARAKLEELLGHRTAQLAATRRDLRSARAVLRGHFGYEGLVGTSEAMRRVYALIDRVKDTDIPILITGESGTGKEVVARTIHNASPRAKKPFVGVNCGAIPEHLLESELFGHVRGAFTGADRDRKGLFREVTGGTILLDEIGEMPQKMQAGLLRVLQEKVVRPVGGAREEPVDARVIAATHRDLGDMVSRGAFREDLFYRLLVVEVRIPPLRERIEDIPLLIDHFLGIFAARYGRDRRSVSRAALKRLSAYGWPGNVRQLENVLLNAWVLSDRPELESDDFELPDAAPRSLRGGEAAPRHDRGAAGGGAPAASAGRSAPPSSEPRRVETSLDAHKASERERILLALSSCNWNRVKAAQIVGLPRRTFYRRLKEYGIQ
>CP012670.1|AUX19919.1|483849_484440_+|hypothetical-protein
MGQPAEKQRRATYADLEAVPPHKVAELVRGTLHVFPRPAPRHANAEGALLGELFGPFHRGRGGPGGWWILPEPELHFPDPEVPGEEEALVPDLAGWRRERMPELPETAYFALAPDWICEVPSPSTAAFDRNEKMPVYAREGVRHAWLVDPIARTLEIHVLGADRRWGPPVVHRDAARVRVAPFDAIELDLSVLWAK
>CP012670.1|AUX19918.1|483339_483738_-|uncharacterized-protein
MLQRRAERSAGADPRRTPGNEALHAPTFRIRDPVSDRSNLAATVDGAPLSDEEARDLWTRFSRHMDEHRGDAAGFARESGYVSVTPTFDRGRALLVVRTTEAPPEAPAPRPRADRPAARPGGGKRPARGRRR
>CP012670.1|AUX19917.1|481167_483012_-|uncharacterized-protein
MARTAPIPNIPAIPGMNPGVFILGGGGSGGGGNGRGGDGRGDGQGGNGSNGGNGPRGGGKDAARCGPGSGGGCPNPTHGSGGGTHAGDPVDPIRGRVYTVAVVDLALPGPIPLVLKRSYSSALAEEDCGLGSGWTHSLAWQVEERRRGVRVLEPHAAATELPRKLEPGGSARLPCGVLTRYAWGYALAADGLAYLFAEARGGRWLLSRIADLHDNQIELLYEDGRLVQVIDSVGRVVRVRRHRDGHIAAFEVKNASAQGRWVARRRYAFDARGDLVAAEDAAGYAHRFSYDEDHRLVRREEPGGLVAEFRYKDGRCVETWCHRAGNDALDDGAPETLSDGSRAKGFLHVKVEHHGDALTEVITSRAIRRVDGNAFDKLDRMVWGGGGGVHTFRYDDAGALLEYQDALQQAFRWERDAEGRLVAEVDPMGNRTCYEHDARGLVAAMTDALGGTARYERDARGNVVAVHDDAGFVVGFAYDSRGLLIGATLPNGGETRMEYDALGNRVRVVEPDGSERRIRHDFLGRVVGFADERGHETRFAYDACGRLCAVFGLGGAVTRYDFDADGNLSRITDADGRTTTLRWGGFHVVTELVRPDGSKVRYRYDREQDLVRIV
>CP012670.1|AUX19916.1|479097_481164_-|uncharacterized-protein
MPSRWRGDGEGRITGERTFDRREIDYRLDLQGRITRIRCGLAAVDVEYDALGRIVKRSTSDGREDVFECDALGRIERAVSGDVECAYTYDARGRVLTEVTRRGGEVLAAFAWTYDVMGKAVCVRGPGGALSVQRDVMGRPVAVRVGDQGEPLRFTYDAGGYEVERLLPGGGKIATEVNAEGLIAQQRVLGKARAPRVGPGEPAWVGPLAAPETWRRAYAWSPAGLLRADEDLGGNMGEMLRDGNGRVVERRKAGKVAERFAFTAAGDLERAGERRTYGPGGRLTARTTGRETVRYAYSERGDVIEKRVSGHDGGDERVWRYEWSADGRLLEVRAPEGQTITFAYDAFGRRIEKRVALAGKVERVTRYAWRGDVLVHERCERALEAGEPVVEERRYATLPESLLPLAQIDGATGALRYFVHGVNGLPEALVEGDGRIAGEIAAGLYGDVPTEQAGITPLRLPGQYADEETGLHCNWHRYYDPETGEYLSPEPIGIGASLKPYAYVDDYPMDWADIDGLLRCIITRRNGTQIVRSSGGSEESIHPAVAAALPRTNARQPGDPRPPEGCAEPQALSGHIRDWERRTGRSCVPGDHNWQRNLNSALREVDSIRSETGSNDAVPACPNCSQLIPRLWTMAGRPPPSGRVIGGGTNASRDYASHPTSHLIRTNAQGSMNLGTWNIDGGQFSRRR
>CP012670.1|AUX19915.1|477823_479101_-|uncharacterized-protein
MTSRKSFHRGLDTLKLPASLALRLDRRDEHVELRIDGVRVMERPVGRGRRTSFARSFPKAQLAEIVFEHRLAKLRADGFTTGSRPFAGAHPEEDMLAAAHLIGAQLERHGDPTGTLIAFQVERLRHDGDDARALARELLDSTKEMTFGPIPDFGEPFACVDDGHGGLLGWGYDDDAATIDEVLRPELELIGRDALGFSPDGPDVSLGVVGLHRLRRLLANPAGRSLRSLRLMTFGALGPFLDLLNAHGCASVITSLVARGASPAIGAALPGLRGLGAPERALGVLLAQPAQALRYLTVFRGDDDVRGAIAPLRPERLPALEHLGLWYRPTRAEGLRVLAAHPLIQRIQSLEIWSTDDARRLPFEDLLALRPSLSHLARILLGGHLVPSDVRERFADWPAVEFVSHDRREVIALDIAALGWARALR
>CP012670.1|AUX19914.1|477335_477800_-|uncharacterized-protein
MLSDIAVGGELEWSGPWGKLRLPDGFSGRALVVATDTGITAALGIARGAAAAGAQRLDLLWLVESEAYFVPERFVRDRLPAAVHPSIAAGFPRSDTPSGRRAPLRSPPSGSPRAPTTPSSARATAPSSTRPATGWSRSARRRAACSSRASSTTP
>CP012670.1|AUX19925.1|499229_500450_+|hypothetical-protein
MRIEIRQLTADQLGEFTQPLRVVFGMSPGPEREEGMRRLPELTSRLGAFDGDALVGVAGSFAFTMTTPGGDAPIAGLTMVAVLPTHRRRGILTALIGRHLDEARAEGRPLSVLWATEGTIYGRFGYGLASHACSASIERDRTGFRGEAGAVGRARLLGEAEALEVFPPVWERARPLAPGMLSRSAAWWRGRRLLDDEATRKGGGPLQRVVIEVDGRAEAYAMYCVHHRWDACQIPAGALRVIEAIGATPLGTRLVWRYLFDVDLVQQIEASLLPLDHPLRLLLAEPRRLRLTATDGLWVRIVDVEAALAARAYGGGGALTLEIEDRGCPWNAGRFRLDGGARRAARTTDAPDLRLDVAALGSAYLGGFSFRDLADAGQVAELTEGAVDRADTLFRAARAPWCPEIF
>CP012670.1|AUX19926.1|500453_500999_+|uncharacterized-protein
MTLPLRGVYAVTPTRRRRFLWAAWWTAEPTREPFRPPDASQGGARTVEEARAQAERAAGRPLVEIEPAWATAWTRILRGEPPWPKPRARRAAPPPPSEEPPPGPPGRAPLRPSFARGVSPFAVLGVTEAAGPDEVRQAFRRLALATHPDRGGDAGEFMRVKWAHDEAMSRLSRPRRRGRQR
>CP012670.1|AUX19927.1|500995_504316_-|protein-kinase
MSQTGTAGPAESATAMARAADADPQRTQRILPAAGHSRPPCPLPRPDSGAAQDTVFANVEPPGSRAPSRFPIRDWDRYECISLVGKGGMGTVYKARDPRLHRYVALKLIRGNDPELTQQFIWEARAQARVEHPNVCKVYEVGEAQGQPFIAMQYIDGQPLHRVARRMTLEQRVKVLADVAEGLHAAHRLGLIHRDIKPANILVERTAEGAFRPYLVDFGLARETAADGRTSTSGEGTPAYMAPEQVSGGLRPLDRRTDVYCLGATLYEALTGRPPFSDPSITTLIFRVEREQPAPPRQLDKGIPVDLETIVMKCLEKAPQRRYDSAKALALDLGRYLEGEPIEARPPSLAYLALTRARKHKLVVAAAALSLAVLAFTGVVALRARLAAARQAELSAQVASLAQGFGQDVKEMELFMRYAYALPLHDVSREKGVIRARMGEIDRKMQAMRGAAGELAAGPGNYALGRGHLALHEPEEALARLEAAQRSGYVEREAKLAAGLAHGMLYQKGLDRARRLASTQERAAQQRELDARHKVPAIRYLRESVSSIVAPSSYTSALIALYEERFDEALAEARSAFARSPWEYEAKKLEGDILFTKGMAALDRGERDEALDAFQGAIASYESAAQMAESDPDVHEAAARAFREIMLIEVSRGNDVERTFARLIDRCDKALLAEPRASGAHANKALAYVLRARRDLTRGSDPRADLGAAITAGEHAIRWDPGDSTAYGAIGVSYFLIASYEGTLGLDQRPALARAVENMQRSVALNPNSAWAWNDTGIAYGMMAEYSASHGDDPIPLFELSASHMERAIEVAPNEAPALLNQGWFHAQRARYELDHGASPEESLDRAKDSLEAAIRLRPDTPQAYNNLALVYLIEGRYEGLSGRSPDVALARALDGYSAARSLDPEDIEAQQGVALALAEAARWALDRGEDPTPHLRSAKDVLDPILAAKPHNAEAHLSHARLDLLAARWAASRGVSPGAPLVAAERSLLRAVASNGGNAKIYGAMAEVHRRRAASVGQPIEGARAEVAAGLAMIDRALGIDPGLPAAIAEQGALLVQQAKTERAGEARAARARQARALLEGALRDNPLLARDYGPLLEEARGLSP
>CP012670.1|AUX19928.1|504520_505348_-|uncharacterized-protein
MRSLMFTLLLPLAYGCAPDAPRKEESFASRAHIMPSGDGHSPSSLHSNGIVPNGIVPNGIAPNGIAPNGIVPNALRPDRIPSSALRSLKDEGPGGTLSRTFVKYAVGCAFDPSQTFTFRWSGGTEEYKGALGLAPEWADGPLSPAKQRWVSACIAARTNRLGVPVMISMRSPAPPGLAAGEGERRAFSHKEGAFWGNLFEERPALYACHVPESIEHARSKGRSCATGLDTGSGVAGCGLIQPMGDCSSICTSAGDPEMGYVACGGSTEVITTFVD
>CP012670.1|AUX19929.1|505782_506496_-|oxidoreductase
MNQRMALIPLAAALAACTPSGDTTAPGTPAATGTPAATGAPAAPAPRPATADAAKAAPGVQAKIGQPAPDFALPDLDGKIVKLADHKGKTVVLEWFNPGCPFVQLAHRQGGLKDVPAQHIAKGVVWLAINSGAPGKQGAGKGVNEKAKGELGMSYPILLDEKGDVGRAYGAERTPHMVVIDPKGTLIYAGAIDSTKGGEPEPDEQVTNYVDAALAELAAGKPVSTPETEAFGCTVKY
>CP012670.1|AUX19930.1|506707_507064_-|hypothetical-protein
MKQQLDGAVVLTAAEEEVMEYLPNKGVFLAQLLGRVRGQGFGFYKGRMEPGCEISRERHADNSETIYILAGEALGIVGDREVPLGPGQMMHVDRNVHHGLRNAGAGPLEFLVIGHPDF
>CP012670.1|AUX19931.1|507177_508917_-|hypothetical-protein
MGPDATDVTEAIRADDAPRGEGPGGAGQRPGGGRAGERAPHAGHPSAARSVTLFEDRAEVVRAARVEVAAGAQWIAIGGVSVFVDERTVQARVAAAGGAAGAGAVRVTAARVRWRAHREAALGREAIDALEREQREAARRASAAALALDRSSRREAHLDALLARWAQAMGTVPKDTGDPGRLASWRAGIEALRAALTEALGASADARGARAHAEDDARRAAERLREGSLETPRYEAVIEVEVHAPAPQPVEIELSYRVACAIWRPEHLARLSAGAPLGAGARDAGGSVELTTFAAAWQATGEAWENVIARFSTARPSRSASAPVLADDVLRARRKTEHERRHVVVEAREQAIAAAGLDRGARAVDEMPGVDDGGEPLIFEAAEPVTLPSDGRPLRIEIARRSLPAELALVLYPEAHPAAHVRATVTLNGGSAGERPRPLLAGPVRLARGESLVGRSRLDYVAAGEPFDLGFGVDDAVRVRRTVDEEQETTAITGTRKIRRRVKLSLSNLSIHEKRVLVTERLPVSEVAEVEVALGDAPGWAFDEKDGFLRGRVELPPRGVKSMSFSYEIRAASSVTLPF
>CP012670.1|AUX19932.1|510751_511333_+|uncharacterized-protein
MRAAGSPGRRRRASSGSSETAPSWSRQRRRWARSADSRSIASSSSRICAGSAPRAAGAGGTTRRARTPTTSRAAPDPLDPLDPAASGGPPAAATSARKLPGSASGVIPGTAISATPRGSGAGRSTRRVTTAPRAYTTTPSIRLAHSILSAVIRPSSPPRDALRSANVSRRARGEAAGYLRVSTKSNGGSAARP
>CP012670.1|AUX19933.1|511281_512976_-|hypothetical-protein
MQTALDLTVMLPQSAYDYGERSSGGAHGVVLTRPHVVNLILDLAGYTADRDLASLSLLDPACGHGAFLVPAAERLIRSARRYDRDLRQLETAIRSYDVAPDHVGRARDAVARALARLGLSRSDAERLAGAWIAQGDFLLTHQRRRFDAVVGNPPYIRIEQLSPELQEEYRRRYASLYDRADLYVAFIERGLELLAPDGILSFICADRWTLNRYGAPLRRMLSRWFRIHCYIDLRGASPFESDVIAYPSIFAASPGATASVRVATLSTASPEECEAASLALMRGARARCPGVTVSEYASWFEGDDPWVLSSPEHLGALRSLEARFAPIEAVGGTRVGIGVATGNDRIYIVTDEVDIERERLVPLVMRGDIEDGRIRDARRFVINTFGDDGKVVRLDDYPRLSRYLHAREAEIRKRHIARRSPASWFRTIDRVYPDLVGARKLLLPDIAGSNEVVYDEGRFHPHHNLYVVTSTEWDTEALGGLLSSRVALFFVWSYAVKMRGGYLRFQAQYLRRIRLPPPAALGDALTRDLRGAFRERDFEKLDALALRAYGLAALPPFDFVDTRR
>CP012670.1|AUX19934.1|513144_514953_+|uncharacterized-protein
MIPVLSRAQMRAFDKHAIHHCHVPGVVLMENAGRGAADVISAILSARSAGQPGAAALPDPAARPSPPLSAPGQAPARALFPATLPSGAGPRAGSVPPPPTGRRGAEDARAARVRAFPVRHVPSPGQPATYPLNARVVVVCGAGNNGGDGFVVARHLVARGADVQVFLAAPSEKVTGDSRINHDAYVDLGGALTELPPGAPLAPLEAALAGADLVVDALFGTGLDRPIEGHLADVIGVLNASPCPCIALDVPSGLDADSGAPLGAAVQADETVTFGHLKIGLLTPEGARLAGNVHVVDLGVPDRPILAQVGHVAEVLRKETIGSFLRPREASVHKHSAGNVLVIAGSPGKLGAALLSARAAMRAGAGLVTICTWADAARAVESRVVELMTTSIDPASIAASLDGALAGRRAVAIGPGFGLDERARAAVDHVVLGWDGLKVVDADAVTHFAGRPEALATARGSLILTPHSGELGRLLGRSARAIEQDRFGAVREAVALTRAIVVLKGARTVIALPDGGMFICMAGNPALATAGSGDVLTGMIAALLCSMDPAAAASAGVLLHALAGDVWRAQTGSDRGLLASEIAELVPGLIAALAAGVDPLPA

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Crispr_ID: CP012670_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_8

590432-590673

Orphan

Consensus_repeat	Method
GGTTGGCCGACCGAGGTTGACCGAC	CRT

4 spacers

The CRISPR arrays of CP012670_8

>merge|CP012670|8|590432-590673|CRT
GGTTGGCCGACCGAGGTTGACCGACCGAGGTTGGGAGGTTGACCGACCGAGGTTGAGGTTGGCCGACCGAGGTTGAGGTTGACCGCCGAGGTTGAGGTTGGCCGGGCCGAGGTTGACCGACCGAGGTTGACCGACTGAGGTTGACCGACCGGAGGTTGGCCGACCGAGGTTGACCGACCGAGGTCGACCGGACCGAGGTTGAGGTTGGCCAGGTTGAGGTTGGCCGACCGAGGTTGACCGAC

>CP012670|8|5|590432-590673|CRT
GGTTGGCCGACCGAGGTTGACCGAC	CGAGGTTGGGAGGTTGACCGACCGAGGTTGA
GGTTGGCCGACCGAGGTTGAGGTTG	ACCGCCGAGGTTGAGGTTGGCCGGGCCGA
GGTTGACCGACCGAGGTTGACCGAC	TGAGGTTGACCGACCGGA
GGTTGGCCGACCGAGGTTGACCGAC	CGAGGTCGACCGGACCGAGGTTGAGGTTGGCCAGGTTGA
GGTTGGCCGACCGAGGTTGACCGAC

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX19996.1\|594531_596349_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|206739
CP012670.1\|AUX19989.1\|581382_582366_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214880
CP012670.1\|AUX20000.1\|600508_601504_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX19984.1\|576407_577034_+\|LemA-family-protein	unknown	unknown	gnl\|CDD\|377192
CP012670.1\|AUX19988.1\|580143_581226_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX19987.1\|579410_579980_+\|peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|223725
CP012670.1\|AUX19994.1\|592096_593698_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|223715
CP012670.1\|AUX19985.1\|577033_577834_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224429
CP012670.1\|AUX20002.1\|602869_603478_-\|siroheme-synthase	unknown	unknown	gnl\|CDD\|224562
CP012670.1\|AUX19992.1\|586727_590147_+\|ribonucleotide-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|236049
CP012670.1\|AUX19997.1\|596393_597287_-\|peptidase-M48	unknown	unknown	gnl\|CDD\|320684
CP012670.1\|AUX19995.1\|593694_594387_-\|GTPase	unknown	unknown	gnl\|CDD\|206648
CP012670.1\|AUX20001.1\|601514_602714_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
CP012670.1\|AUX19991.1\|584379_586170_+\|protease-IV	unknown	unknown	gnl\|CDD\|132934
CP012670.1\|AUX19993.1\|591056_592100_-\|thiamine-phosphate-kinase	unknown	unknown	gnl\|CDD\|100030
CP012670.1\|AUX19999.1\|598582_600463_+\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|274455
CP012670.1\|AUX19986.1\|578064_579276_+\|acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|238383
CP012670.1\|AUX19990.1\|582362_584054_-\|ribonuclease	unknown	unknown	gnl\|CDD\|223668
CP012670.1\|AUX19983.1\|575491_576019_-\|ureidoglycolate-hydrolase	unknown	unknown	gnl\|CDD\|377223
CP012670.1\|AUX19998.1\|597376_598405_-\|serine-kinase	unknown	unknown	gnl\|CDD\|270702

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX19996.1\|594531_596349_-\|hypothetical-protein	gnl\|CDD\|206739	cd09912, DLP_2, Dynamin-like protein including dynamins, mitofusins, and guanylate-binding proteins. The dynamin family of large mechanochemical GTPases includes the classical dynamins and dynamin-like proteins (DLPs) that are found throughout the Eukarya. This family also includes bacterial DLPs. These proteins catalyze membrane fission during clathrin-mediated endocytosis. Dynamin consists of five domains; an N-terminal G domain that binds and hydrolyzes GTP, a middle domain (MD) involved in self-assembly and oligomerization, a pleckstrin homology (PH) domain responsible for interactions with the plasma membrane, GED, which is also involved in self-assembly, and a proline arginine rich domain (PRD) that interacts with SH3 domains on accessory proteins. To date, three vertebrate dynamin genes have been identified; dynamin 1, which is brain specific, mediates uptake of synaptic vesicles in presynaptic terminals; dynamin-2 is expressed ubiquitously and similarly participates in membrane fission; mutations in the MD, PH and GED domains of dynamin 2 have been linked to human diseases such as Charcot-Marie-Tooth peripheral neuropathy and rare forms of centronuclear myopathy. Dynamin 3 participates in megakaryocyte progenitor amplification, and is also involved in cytoplasmic enlargement and the formation of the demarcation membrane system. This family also includes mitofusins (MFN1 and MFN2 in mammals) that are involved in mitochondrial fusion. Dynamin oligomerizes into helical structures around the neck of budding vesicles in a GTP hydrolysis-dependent manner.	4.16205e-57
CP012670.1\|AUX19989.1\|581382_582366_-\|hypothetical-protein	gnl\|CDD\|214880	smart00880, CHAD, The CHAD domain is an alpha-helical domain functionally associated with some members of the adenylate cyclase family. It has conserved histidines that may chelate metals.	3.93019e-19
CP012670.1\|AUX19984.1\|576407_577034_+\|LemA-family-protein	gnl\|CDD\|377192	pfam04011, LemA, LemA family. The members of this family are related to the LemA protein. LemA contains an amino terminal predicted transmembrane helix. It has been predicted that the small amino terminus is extracellular. The exact molecular function of this protein is uncertain.	7.67523e-58
CP012670.1\|AUX19994.1\|592096_593698_-\|histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	5.56275e-64
CP012670.1\|AUX19987.1\|579410_579980_+\|peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|223725	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones].	2.71877e-60
CP012670.1\|AUX19985.1\|577033_577834_+\|hypothetical-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	1.50415e-44
CP012670.1\|AUX20002.1\|602869_603478_-\|siroheme-synthase	gnl\|CDD\|224562	COG1648, CysG, Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism].	8.33117e-30
CP012670.1\|AUX19992.1\|586727_590147_+\|ribonucleotide-diphosphate-reductase-subunit-alpha	gnl\|CDD\|236049	PRK07562, PRK07562, vitamin B12-dependent ribonucleotide reductase.	0
CP012670.1\|AUX19997.1\|596393_597287_-\|peptidase-M48	gnl\|CDD\|320684	cd07325, M48_Ste24p_like, M48 Ste24 endopeptidase-like, integral membrane metallopeptidase. This family contains peptidase M48 family Ste24p-like proteins that are as yet uncharacterized, but probably function as intracellular, membrane-associated zinc metalloproteases; they all contain the HEXXH Zn-binding motif, which is critical for Ste24p activity. They likely remove the C-terminal three residues of farnesylated proteins proteolytically and are possibly associated with the endoplasmic reticulum and golgi. Some members also contain ankyrin domains which occur in very diverse families of proteins and mediate protein-protein interactions.	3.45285e-75
CP012670.1\|AUX19995.1\|593694_594387_-\|GTPase	gnl\|CDD\|206648	cd00882, Ras_like_GTPase, Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases). Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras, Rho, Rab, and Sar1/Arf families. This superfamily also includes proteins like the GTP translation factors, Era-like GTPases, and G-alpha chain of the heterotrimeric G proteins. Members of the Ras superfamily regulate a wide variety of cellular functions: the Ras family regulates gene expression, the Rho family regulates cytoskeletal reorganization and gene expression, the Rab and Sar1/Arf families regulate vesicle trafficking, and the Ran family regulates nucleocytoplasmic transport and microtubule organization. The GTP translation factor family regulates initiation, elongation, termination, and release in translation, and the Era-like GTPase family regulates cell division, sporulation, and DNA replication. Members of the Ras superfamily are identified by the GTP binding site, which is made up of five characteristic sequence motifs, and the switch I and switch II regions.	3.37452e-08
CP012670.1\|AUX20001.1\|601514_602714_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	4.68535e-08
CP012670.1\|AUX19991.1\|584379_586170_+\|protease-IV	gnl\|CDD\|132934	cd07023, S49_Sppa_N_C, Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. Interestingly, the single membrane spanning E. coli SppA carries out catalysis using a Ser-Lys dyad with the serine located in the conserved carboxy-terminal protease domain and the lysine in the non-conserved amino-terminal domain.	3.79329e-80
CP012670.1\|AUX19993.1\|591056_592100_-\|thiamine-phosphate-kinase	gnl\|CDD\|100030	cd02194, ThiL, ThiL (Thiamine-monophosphate kinase) plays a dual role in de novo biosynthesis and in salvage of exogenous thiamine. Thiamine salvage occurs in two steps, with thiamine kinase catalyzing the formation of thiamine phosphate, and ThiL catalyzing the conversion of this intermediate to thiamine pyrophosphate. The N-terminal domain of ThiL binds ATP and is related to the ATP-binding domains of hydrogen expression/formation protein HypE, the AIR synthases, FGAM synthase and selenophosphate synthetase (SelD).	7.81048e-77
CP012670.1\|AUX19999.1\|598582_600463_+\|GTP-binding-protein	gnl\|CDD\|274455	TIGR03156, GTP_HflX, GTP-binding protein HflX. This protein family is one of a number of homologous small, well-conserved GTP-binding proteins with pleiotropic effects. Bacterial members are designated HflX, following the naming convention in Escherichia coli where HflX is encoded immediately downstream of the RNA chaperone Hfq, and immediately upstream of HflKC, a membrane-associated protease pair with an important housekeeping function. Over large numbers of other bacterial genomes, the pairing with hfq is more significant than with hflK and hlfC. The gene from Homo sapiens in this family has been named PGPL (pseudoautosomal GTP-binding protein-like). [Unknown function, General].	6.77413e-166
CP012670.1\|AUX19986.1\|578064_579276_+\|acetyl-CoA-acetyltransferase	gnl\|CDD\|238383	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.	0
CP012670.1\|AUX19990.1\|582362_584054_-\|ribonuclease	gnl\|CDD\|223668	COG0595, COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair].	5.61669e-153
CP012670.1\|AUX19983.1\|575491_576019_-\|ureidoglycolate-hydrolase	gnl\|CDD\|377223	pfam04115, Ureidogly_lyase, Ureidoglycolate lyase. Ureidoglycolate lyase (EC:4.3.2.3) is one of the enzymes that acts upon ureidoglycolate, an intermediate of purine catabolism, releasing urea. The enzyme has in the past been wrongly assigned to EC:3.5.3.19, enzymes which release ammonia from ureidoglycolate.	3.24892e-57
CP012670.1\|AUX19998.1\|597376_598405_-\|serine-kinase	gnl\|CDD\|270702	cd05153, HomoserineK_II, Type II Homoserine Kinase. This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a Protein Kinase fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. The Type II homoserine kinase subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	1.84269e-74

>CP012670.1|AUX19992.1|586727_590147_+|ribonucleotide-diphosphate-reductase-subunit-alpha
MAQSAVVGDGGKLSAGNGKMTARTKEEGGDRPAIGAAKGAQADGRAASKGPKKGASRVRGLGFERRFTHRGVDPLDEVTWERRSSVITNPDGSVVFKMEGAEIPAGWSQLATDIVVSKYFRKAGLHGKKELGETSVRQVVHRLARTIREAGEHFGGYFASAKDADTFEAELSYLLVHQYGAFNSPVWFNCGLFHRYGIEGSGGNYAWNEASADAGNGAGKAGAQRAGAAGAAVAVDEIIETRNAYERPQCSACFIQAVADDLMSIYDLVKSEARLFKYGSGTGTNFSAIRGKQEKLSGGGTSSGLMSFLEVFDRAAGATKSGGTTRRAAKMVCLDMDHPEIVDFVQWKVREERKAMALIAAGYPSDFNGEAYHTVSGQNSNNSVRVSDEFMRAAATGSSWETRARTTGEVVETLSAKDLWRQIAEAAWGCADPGVQYDTTINRWHTCPNTARINASNPCSEYMFLDDSACNLASLNLTRFLREDGSFDVEGYRHAVRVFFAAQEILVDFSAYPTRNIAKNSHDYRPLGLGYANLGTLLMLLGVPYDSDQGRAVAGALTAILCGHAYKVSAEMAAAKGPFAGFARNREPMLRVMGMHRDAAYAIDRDRCPEPLWRAACADWDEAVRLGQEHGYRNAQATVLAPTGTIGLLMDCDTTGIEPDFSLVKFKKLAGGGYFKIVNQSVPEALRRLGYVEAEVQEIVAYVSGTNTLLAAPHVNRASLKARGLTNEDLAKVEAAIPSVFELDLAFGPWILGEETYDRLGVSKESRARFGFSLLQHLGFSAAEIEEANEAIVGRMTVEGAPHLREEHYAVFDCANRCGKKGRRYLAPMAHVRMMAAAQPFLSGAISKTVNLPNDATVEDVQRIYEEGWRLGLKAVALYRDGCKASQPLSSTSSSSEGKATESKAKAEITGPVVQAATAALATPARPRSPSAAAPERFRLPRKRKGFTQEARVGGHKIYLRTGEYDDGTLGEIFIDLHKEGAAFRSMMNCFAMAVSIGLQYGVPLETFVEQYTFTRFEPQGVVEGHDYVKFSTSIVDYLFRVLGVEYLNRYDLAHVQPLSSAMEDPVESRAQESGVASFPQASPSAALLDGGGRSASALDAQLEDMMGDAPVCDGCGHITVRNGACYKCLNCGNSMGCS
>CP012670.1|AUX19991.1|584379_586170_+|protease-IV
MEPPVIAALLVNLLRLLLLPVSALRWAFAAPRGGYVVLEIDGRVVDLQPPRVRVSLSVRPRKRAPLSVERVRELGKHLMKDGRPRGLLLRMRSVHAGPAVVASLRDALLEIRAGGKDVVAYLPMGADNTMLQLASAARAIVVGPETLVSPLGFAVEGRYVRRALEQAGVEPEVFAKGMYKNAGEVLVRDTMSAPQREQVGALLDARLGDLTAALAQGRRVDRETAARWIDEAPYGAEQAVAQGIVDAVAYEDELEHLLAAGLLSGPTPSRGVGAADPAGGGAAAARPARARLVTAGRYLGARRALSLRPVLPRPIIGVVEVHGAIVSRAHFRGASLASEERLVASLRSARQNPRIRGVILHIDSPGGSALASDRIHHEVTRLAEVKPVVACLSNVAASGGYYVAAAAHAIVAQPQTITGSIGVVSARFTLGPLLDRLGVSTDVVKRGARADLFSPSRRLDPGERAVVERELDAFYATFLRVVARGRRRPIEEIEPLAQGRVYSGADAQARGLVDMLGGFERALHELRQMIGPRAAAIEPVIVRASRYIPPPPLLPAPVPALLEIVGLRRVADPIALAIHCEGERVLAYCAEADGLE
>CP012670.1|AUX19990.1|582362_584054_-|ribonuclease
MHPEQSAPVPSQLPPPAPSTLRLVPLGGLGEVGMNCLALEQASSVLLIDCGVTFPTSDLGVDVYHPRFDHLLALRDRVCGVVLTHGHEDHIGGLPYLLRHLDVPIWGPPHALELVRHRLAEHGLEERARLVPTQVGREVTIGGFVVEPLRVTHSIVDATALAIHTDAGLIIHTGDFKLDPTPLDGEPTDEARFRALGDAGVRLLLSDSTNVDSPGEAGSERDVAHALAELVETAPARVVVGIFASNVQRLLALGQAAVRARRKICLLGRSVQTHARAAQAVGRLPWPSDLLVPPEMAAAMPRERLLVIASGTQAERASTLMRFASGTHPHLRLEEGDRVILSSRVIPGNDRPVVDMMGGLLRLGVELVTWSTDRRVHASGHAHRTEQARMIDLTQPRSFLPVHGALHHLTRHAALARERGVSEVLVAENGHVVEIGKTQPLRRSGRAITGRVATAGGEALGDEVLRERGNLGRSGVAFVSLVVDVHGALAAPPQVLARGVTGELEGGALRAAARAVAQAVNDCDPRARRRDTDLIEIARLAARRAIEGKLGRRPLVTVALTRL
>CP012670.1|AUX19989.1|581382_582366_-|hypothetical-protein
MTPRDGSGPPPDGGGKKLTAADFLGPVLRSHIQRVRAEARRVVATSAQGEGVEPDVEAVHDFRVALRRLRTLLKPARRVYGKKRLRPVADGLRELARATGALRDEEVLREMLTALELDGEPRAAVDAWLAERSRAEREARARIVELLRGEEPGGAGAPRASGEARQGPPRLEPHLARLERRVARKEAKRRRAEALARRAIERALEDVRALAASDPGDGAAMHALRIRFKRLRYSAETFSPLLGERAGRAARSAQRMQRRLGDLHDVDEALAQMRGAEGLSPEQRGAVVEALGAARARLAAKAAEELAREIEALAALWPDGPRGARRA
>CP012670.1|AUX19988.1|580143_581226_-|hypothetical-protein
MRRSAFLRRPAFSSVVAIVALLATGACTQDFDQFEPLLLSGSSGAGGAGSGGTATTTASAGAGGAEDCANGDDDDSDGAVDCADESCSGFSCVAVPDGWRGPGLLYDGPASAEIACPAGFSERVDVGGRGVEATATCSPCSCGAPEVECEEPTLLGYSDDACDARRPDPYAIQPDQCIPLPASLPFDSYRAAPPEVAAASCPASGGEPTGLAPRFRAEGLVCTRPPGEDGCDAGEACAPREIDGPFERGVCVYREGDRRCPQGFDERRVFARDMDDRRGCTRCTCDVSGVSCTATTTLFDDDDCRRSAATVPHDERCMVAPSVAALRVDVAGTGSCQPRGGMPTGEVVEGDGKITVCCAR
>CP012670.1|AUX19987.1|579410_579980_+|peptidyl-prolyl-cis-trans-isomerase
MDFPAINVPGTGQLHARIKTSLGDITVRLEEQRAPNTVKNFVGLATGAINWTDPTTGKGMQGTPCYDGVRFHRVISGFMIQCGDPLSRYPEKAPLWGTGGPGYKFADEFHPELRHDTEGVLSMANAGKNTNGAQWFITEGPTPHLDNRHAVFGKVVSGMDVVHRIASVPTTRDRPNQDVVLERVELFRQ
>CP012670.1|AUX19986.1|578064_579276_+|acetyl-CoA-acetyltransferase
MAAALRPVFVVDAVRTPIARYAGTLATVRPDDLAAHVIDALVRRKPSLAPRLDQVVLGATNQAGEDNRNVARMAALLAGLPYEVPGVTVNRLCGSGLEAVADAARMIATGESDCAIAGGVESMTRAPFTMPKQAERFDRSAPTVYDTTLGWRYPNPRMAARFELQSMGETAENVAKKHGVSREDQDRFALLSHERATLAWESGGFAAEVVPVQVPQKKGEPVLFERDEAVRVDASLEALAKLKPAFREGGTVTAGNASPLNDGAAALLLASSDAVQSAGVTPLARVVGTATAGVDPNLMGEGPIPAVKRLLQRTGLRVPNVDLFELNEAFAAQALACSRALELDPARVNVRGGAIALGHPIGCSGARIACTLVHAMRARGAKVGVASLCVGVGQGIATLFERA
>CP012670.1|AUX19985.1|577033_577834_+|hypothetical-protein
MLAGVALRQGVSGGARLRAVARAVAAAIALVCALVARPALAAFTPPPLTGHVVDTAGRLGPTDIRKLDAKLDRIRRQTGFEIVAFVVGSLEGETIEDVAYTTFNTWQLGQRGADNGVLLVIAPAERRVRIETGKGVGGALTDLQSNDIIREKITPLLRQDRFAEAVDRGTEAIARALVTGTPEEERRPAPKAQPAPLSPVKIVVTIVAVVAALLLAIISPSFRWFLWFALQALLFRGGGRGDGGGGSGFGGGGGGRSGGGGSSDSY
>CP012670.1|AUX19984.1|576407_577034_+|LemA-family-protein
MRIVHKSTFRGRHVVVSLFLAVLALMVSVAGCQRYDELVEKDQIAAQKWSDLEANLQRRYDLVPNLVAVVKASAKHEEQTLASVADARSRATSIQLKAEDLTDPEKVAAFQKAQEQLSSSLSRLLVVQEQYPNLKANQAFHSLQVQLEGVENRILRAREEYNQAAREYNAELLKIRGQVVNKATGQPFKPRVYFTASPEVQSAPKVSF
>CP012670.1|AUX19983.1|575491_576019_-|ureidoglycolate-hydrolase
MSHRQRIVAHALSPAAYAPYGDVLMASPHGQPGRPANQGTARRFDHLAGLEDLRPGRAALNLSVFRCAPRSTSPFPIALLEKHPGSTQAFVPMNARRYLVIVALGGARPDLTTLAAFIARGAQGVTYRPGVWHHPMIALDAETDFVCLAWEDGSAGDCVVVEYEERERIAVEIAP
>CP012670.1|AUX19993.1|591056_592100_-|thiamine-phosphate-kinase
MTARSEWTRIEMLRAVLGGAAGERVLYGIGDDAAILAPAALPPAAPADAVPAESAPGGPRGGASAGAQELLVWTVDSAVEGVHFRRDLLSFEDLGYRATMAAASDLAAMGARPVGLLAALVLPRDVGDDELLALARGQRAACDALGAAIVGGNLSRGGEISITTTALGAAPAPLRRDGARPGDALALAGPVGLAAAGFALLDRGIAPASAAAERAIEAFRRPLARIEAGLRAAVGARAAIDISDGLAADLAHLARASGVRVLLDPSALVGPDLREAAALLGADALELALHGGEDYAVAVAGPGVGALPGFVTIGRCAPREEGASEVALLEPDGQLTSLVARGYDHFA
>CP012670.1|AUX19994.1|592096_593698_-|histidine-kinase
MRPDAHKETPAGCGLDDEDLLGVPGSAPVPSARTADASGASKRDGPQGAPEPATLPPPAAAPIVDLVGIGPLSLEDLVDRGALGEMAASFHRLFGLPIRIQSTSGVTLAESGALEPPGGPVGEEQHVRRPGAAPADRAARRGAPVGDELTDPRFSGALYQVFPIEYDGRTIGRSILGPYLPEDSEGAPAAPVEAAAPPDPASAAEPAPRLARLRPERLGEIADHLRAVLDLILFSGHKSLLTSTMHVASIRESFRELSQKNAELEQAYERLKELDRLKSNFLATVSHELRTPLTSIMGYSEMLAEGIGGPLNDEQREFIETIRSKSEQLLGLIMSLLDLSKLESGTLIVRRAEVAVAPMLHDAASTIAPAATKKGVDLRIDAEGDLPPVLGDGDRLRQVFINLVENAVKFTEAGGEVQLVARAVSDEGDDLPGLVLVAPLQQAVEIRVVDTGIGIAPGERSKVFDPFYQVDQSSTREHGGTGLGLSIVKRLVEAHGGTVRIETNEPRGTVFVVKLPTAAGAPANSVGAPPVFQ
>CP012670.1|AUX19995.1|593694_594387_-|GTPase
MQLDFAAREVTIKLVYYGPALSGKTTNLVSLHGLAGSDARGRLMTLETQDDRTLFFDLLPLTFRAKDGDVSLRIKLFTVPGQPMHAATRRLVLQGADGVALIADSQVSETQRNAEAFFDLRHNLRENGLDLARMPLVIQFNKRDLPDIRSDEELARLAARGKEPVYRAIATRGMGTVETFMGLLHLTWETLDQTHQLSKRLSISGEELLNSAARQLGVTSSVGDLLARRM
>CP012670.1|AUX19996.1|594531_596349_-|hypothetical-protein
MLESFHSRKDDVTGALRDLVEFAEALGARSVAARVTNDLVKKLEADRFHLVVVGEFNHGKTTFVNALLGSPILPVGVTPTTAVIHHLEYAADPRAEVVYASGERTALPFEEVRAFTVGGARSSSAGEVQYLEVGYPAELLRERVVLVDTPGVNDLSLQRADITYSYIPRSDAVLFLIDAGQPLKESERVFLQEKLLGQSRDKILFVVTKRDIWSQDEEVEALAYIRGELARLVKSPVVFPISSERALEGDVAGSGMPELLDHLTRFLAEERGRILLDNALGEGLEAARLLGKGVDARRRATAMSRDELTRRIEMIEKDLAGQSRTIEERRAGIREEVSAIRAWVGRDLDRFVDDVLRQLPAIIDEANTDEIKVYLGAFLERTFAEWAQAETKEIATALEALAEKTIALVREDAHDVARRVGEALGGDVKAPNVEVDTFGYDVGVFALFTIGLGVMFTNALLGGILALAAPVLAVYVKEKVEAETRKKAKEMAPVALREAAARIGPKLDEMIQEFASRLDAWVVTAGEELHREVIEVLKAAREERARAEPSDETQLKACDAQAEALRALTSRLEGLRSALWTPENGESKPIPPPLSSVPNAPGGSA
>CP012670.1|AUX19997.1|596393_597287_-|peptidase-M48
MAQVGTLDFKGFIERRKGQRAGGSDGAGNAYAYVSDKNTRLAFEKMRPVELAVTAAVRLFKTVGKTELLGHAVKVGPTQFPRVHHLALRCAETLGIATPTIYIVNSPHLNAATYGTNDDSFIMVHSALVDHFTDDELLSVIGHECGHIHNSHVVYLTAMHYLTRMASVFVKWIVGPAMLALSGWSRRAEVTCDRAGLLCVKDLDVSTRALTKLALGSTKLYEELNLEAFIAQHEEGKGGIGRFAEFTANHPWLPKRVLALRAFAESELYRRHAGLGASGLSMEEVDEKVHEVIKIWG
>CP012670.1|AUX19998.1|597376_598405_-|serine-kinase
MAILTPLSLADARRVGALYGLEIADVRGLLAGSVNSNYALTLADGRGRVFLRVYEEQRHEAAAREARMLEHLAAGGVATPQPLRRRDGASEADGAAFIAEHAGKPVALFPWVAGDSLCQARVTPDAARRVGSALARVHLVGASFEGANASRFDLDNLDQRLRGLRALRHAGADAASPAAAFTPEVAAAVDELALRLERIRAAAPRAPGPQTLIHGDLFRDNVLWQDGEISALLDFESASRGSAAFDLAVTMLAWCFGDDLDPALAAALAAGYTSVRPLSPEERDRLFHESVVAALRFSITRITDFELRPKGSGVYKDFRRFLARQRTLERLGPGGLRALLRL
>CP012670.1|AUX19999.1|598582_600463_+|GTP-binding-protein
MPTLYGNTTGLSPLATRTLERIYRRKVPLVSLATPELIKALAEASHEAGRQVGALVHRSGEIDSVVVGDATRLMLPDIGRLRAAEGRFRALRLVHTHLFNEPLTRDDLVDLVRLRLDLVAAVQLTPQGEPRTIQYAYNVPVYGKEAATVTVNGAAGGDQGDGRGEAELPYRIVGPVAIGRVDVNFGALIQALEDEFAKRSRTRSVAAKDGRAILVHVAEKSKAGALARAEESLRELTELAGTAGVDVADRVLQLRDRIDPRLVLGKGKLDEVVLRASELDAETLVFDRDLTPSQASAIARHTDLKILDRTQLILDIFAQRAESSDGKLQVELAQLKYALPRLGQKDDSLSRLTGGIGGRGPGETKLEIGRRRAKERVSFLEAQLKRLSRQREQRRRRRARLGVPVVSIVGYTNAGKSTLLNTLTGADVVAENKLFATLDTRSRRLRFPEEREVVITDTVGFIRELPKDLFAAFRATFEEAADADLLLHVIDVSDPARDQHIETTEALLTELDLIGIPRILVFNKADLVDPAEGRRLLLGHPDAVLVSATDRETTRGLLTRIAERLKTRWEEAALVPAYEAGAEGGELELEDGDLFAGEAGSLTVIAPSPVTGVEEVSSRVRETFEA
>CP012670.1|AUX20000.1|600508_601504_-|hypothetical-protein
MWKNQYLLAMAICAGALTTSAMGCELIATVDRSRIQGAGGGGVGGGGGGGGEDVSCSDETKNGDETDVDCGGGDCPKCEIAKACDEADDCESGFCADGVCCDAACDSDCDACTAALKESGEDDGTCGPSKAETECGELTCADGVQTEPGTCDGESTECVPGATTECETFACDPDANACFTTCAEDANCATCHTCTDDGECELAEAGATGLGCEEDQACNATGECKAANGQECTAPEDCGSGNCVDGVCCDTACDGTCMACNVAESAGTCSPIALGGEDADNCEATQVCDGEGACKLKPREACTDDAECASNNCLDTGDVCGPIPTTPAPEP
>CP012670.1|AUX20001.1|601514_602714_-|hypothetical-protein
MRSRSGRLTNLTSAAMVTGLLTLTNVSPASAQGAATPAAKPAAQAAPGAAPTPAPSPAAPPAAGAPAAAAPGTGGDAAVTVTAAKPPAKPLTEKQKKDAAKKLYKEAESRFDKGEYAVAADLYRQADEHVPGAAPKYKLALSLDKQGLTVEAVAAWQVFLDSKPDAEKFKDKIAEAQERIEALKKTPAKVKVATVPEAPPNLKIAVDGVAQAGTELSIPPGKHTLTVSAEGFVDSSQELEVSFGETRDVSVALTPQQAPVAAAPPPPAPPPPAAEPPAAPPPPAAPIEPRSPVPAYVTLGLAGAGAVVGTIFGIQALSAKGDFDDNPTTKNADSVDRNALIADMSFAVALTFGVTGAVLLLSNDTSAEAKAAASSTTKKAFFAPFVSPTGGGAAARFTF
>CP012670.1|AUX20002.1|602869_603478_-|siroheme-synthase
MRLFPIALDLTGRRALVIGADGEAPPAVERLLAAGARVSVVAPGPVHESIERAAHEGLLELHRRAFVDDDLAGAALVFLVPGDEALSRRLHRELADAGRLVCTLDRPELSNFVNPSVVTASGLTMSFSSHGVSPGTIRRIREDLSALFSDPRFARYIAALRRLRESLPRGAERSARMRRATLGFGLEARLRFPAWLDRGDEP

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Crispr_ID: CP012670_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_9

672515-672612

Orphan

Consensus_repeat	Method
GGCCGCGCTCGAGCAGGGGCTCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_9

>merge|CP012670|9|672515-672612|CRISPRCasFinder
GGCCGCGCTCGAGCAGGGGCTCGCCGGCGATCGCGAGTACTTCGTGGACTGAGGCGCGCCGTCGAGCGGGGCACGGCCGCGCCCGAGCAGGGGCTCGC

>CP012670|9|8|672515-672612|CRISPRCasFinder
GGCCGCGCTCGAGCAGGGGCTCGC	CGGCGATCGCGAGTACTTCGTGGACTGAGGCGCGCCGTCGAGCGGGGCAC
GGCCGCGCCCGAGCAGGGGCTCGC

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX20048.1\|664418_665564_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX20059.1\|676256_677204_+\|glycyl-tRNA-synthetase-subunit-alpha	unknown	unknown	gnl\|CDD\|236473
CP012670.1\|AUX20050.1\|666125_667634_-\|AMP-dependent-ligase	unknown	unknown	gnl\|CDD\|341267
CP012670.1\|AUX20062.1\|678537_678852_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224578
CP012670.1\|AUX20061.1\|677817_678534_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|377376
CP012670.1\|AUX20063.1\|678906_679332_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377376
CP012670.1\|AUX20060.1\|677242_677821_-\|orotate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234771
CP012670.1\|AUX20047.1\|663660_664191_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX20064.1\|680242_681634_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|380046
CP012670.1\|AUX20045.1\|661113_661974_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366130
CP012670.1\|AUX20049.1\|665620_666088_+\|alkylhydroperoxidase	unknown	unknown	gnl\|CDD\|225039
CP012670.1\|AUX20051.1\|667644_667908_-\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|376348
CP012670.1\|AUX20065.1\|681677_684983_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238742
CP012670.1\|AUX20057.1\|674551_675025_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
CP012670.1\|AUX20046.1\|662746_663583_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX20056.1\|672654_674550_-\|chloride-channel-protein	unknown	unknown	gnl\|CDD\|238233
CP012670.1\|AUX20053.1\|669809_670244_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|319898
CP012670.1\|AUX20052.1\|667968_669354_-\|cystathionine-beta-synthase	unknown	unknown	gnl\|CDD\|273464
CP012670.1\|AUX20058.1\|675268_676129_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|99749
CP012670.1\|AUX20054.1\|670815_671073_+\|transglycosylase	unknown	unknown	gnl\|CDD\|225170

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX20059.1\|676256_677204_+\|glycyl-tRNA-synthetase-subunit-alpha	gnl\|CDD\|236473	PRK09348, glyQ, glycyl-tRNA synthetase subunit alpha; Validated.	0
CP012670.1\|AUX20050.1\|666125_667634_-\|AMP-dependent-ligase	gnl\|CDD\|341267	cd05945, DltA, D-alanine:D-alanyl carrier protein ligase (DltA) and similar proteins. This family includes D-alanyl carrier protein ligase DltA and aliphatic beta-amino acid adenylation enzymes IdnL1 and CmiS6. DltA incorporates D-ala in techoic acids in gram-positive bacteria via a two-step process, starting with adenylation of D-alanine that transfers D-alanine to the D-alanyl carrier protein. IdnL1, a short-chain aliphatic beta-amino acid adenylation enzyme, recognizes 3-aminobutanoic acid, and is involved in the synthesis of the macrolactam antibiotic incednine. CmiS6 is a medium-chain beta-amino acid adenylation enzyme that recognizes 3-aminononanoic acid, and is involved in the synthesis of cremimycin, also a macrolactam antibiotic. The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.	7.06058e-104
CP012670.1\|AUX20063.1\|678906_679332_-\|hypothetical-protein	gnl\|CDD\|377376	pfam04519, Bactofilin, Polymer-forming cytoskeletal. This is a family of bactofilins, a functionally diverse class of cytoskeletal, polymer-forming, proteins that is widely conserved among bacteria. In the example species C. crescentus, two bactofilins assemble into a membrane-associated laminar structure that shows cell-cycle-dependent polar localization and acts as a platform for the recruitment of a cell wall biosynthetic enzyme involved in polar morphogenesis. Bactofilins display distinct subcellular distributions and dynamics in different bacterial species, suggesting that they are versatile structural elements that have adopted a range of different cellular functions.	1.15206e-23
CP012670.1\|AUX20060.1\|677242_677821_-\|orotate-phosphoribosyltransferase	gnl\|CDD\|234771	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated.	7.04939e-54
CP012670.1\|AUX20058.1\|675268_676129_-\|uncharacterized-protein	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	4.67512e-09
CP012670.1\|AUX20064.1\|680242_681634_+\|oxidoreductase	gnl\|CDD\|380046	pfam17885, Smoa_sbd, Styrene monooxygenase A putative substrate binding domain. This domain is found in the 46 kDa FAD-specific styrene epoxidase (SMOA) protein, comprises a part of the styrene monooxygenase (SMO) two-component flavoprotein monooxygenase enzyme. Structural analysis indicates that SMOA monomer comprises two globular domains spanned by a long alpha-helix. This domain contains a putative substrate binding site.	4.83153e-21
CP012670.1\|AUX20045.1\|661113_661974_-\|hypothetical-protein	gnl\|CDD\|366130	pfam00494, SQS_PSY, Squalene/phytoene synthase.	1.59603e-10
CP012670.1\|AUX20049.1\|665620_666088_+\|alkylhydroperoxidase	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	1.93682e-28
CP012670.1\|AUX20051.1\|667644_667908_-\|acyl-carrier-protein	gnl\|CDD\|376348	pfam00550, PP-binding, Phosphopantetheine attachment site. A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of the anguibactin system regulator AngR has the attachment serine replaced by an alanine.	1.85828e-08
CP012670.1\|AUX20065.1\|681677_684983_-\|hypothetical-protein	gnl\|CDD\|238742	cd01465, vWA_subgroup, VWA subgroup: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Not much is known about the function of the VWA domain in these proteins. The members do have a conserved MIDAS motif. The biochemical function however is not known.	2.75073e-14
CP012670.1\|AUX20062.1\|678537_678852_-\|hypothetical-protein	gnl\|CDD\|224578	COG1664, CcmA, Integral membrane protein CcmA involved in cell shape determination [Cell envelope biogenesis, outer membrane].	1.89167e-24
CP012670.1\|AUX20057.1\|674551_675025_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	8.48047e-17
CP012670.1\|AUX20056.1\|672654_674550_-\|chloride-channel-protein	gnl\|CDD\|238233	cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel. The ClC chloride channels catalyse the selective flow of Cl- ions across cell membranes, thereby regulating electrical excitation in skeletal muscle and the flow of salt and water across epithelial barriers. This domain is found in the halogen ions (Cl-, Br- and I-) transport proteins of the ClC family. The ClC channels are found in all three kingdoms of life and perform a variety of functions including cellular excitability regulation, cell volume regulation, membrane potential stabilization, acidification of intracellular organelles, signal transduction, transepithelial transport in animals, and the extreme acid resistance response in eubacteria. They lack any structural or sequence similarity to other known ion channels and exhibit unique properties of ion permeation and gating. Unlike cation-selective ion channels, which form oligomers containing a single pore along the axis of symmetry, the ClC channels form two-pore homodimers with one pore per subunit without axial symmetry. Although lacking the typical voltage-sensor found in cation channels, all studied ClC channels are gated (opened and closed) by transmembrane voltage. The gating is conferred by the permeating ion itself, acting as the gating charge. In addition, eukaryotic and some prokaryotic ClC channels have two additional C-terminal CBS (cystathionine beta synthase) domains of putative regulatory function.	5.2811e-93
CP012670.1\|AUX20053.1\|669809_670244_+\|uncharacterized-protein	gnl\|CDD\|319898	cd06587, VOC, vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases.	1.93179e-21
CP012670.1\|AUX20052.1\|667968_669354_-\|cystathionine-beta-synthase	gnl\|CDD\|273464	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven. [Amino acid biosynthesis, Serine family].	1.33959e-162
CP012670.1\|AUX20061.1\|677817_678534_-\|uncharacterized-protein	gnl\|CDD\|377376	pfam04519, Bactofilin, Polymer-forming cytoskeletal. This is a family of bactofilins, a functionally diverse class of cytoskeletal, polymer-forming, proteins that is widely conserved among bacteria. In the example species C. crescentus, two bactofilins assemble into a membrane-associated laminar structure that shows cell-cycle-dependent polar localization and acts as a platform for the recruitment of a cell wall biosynthetic enzyme involved in polar morphogenesis. Bactofilins display distinct subcellular distributions and dynamics in different bacterial species, suggesting that they are versatile structural elements that have adopted a range of different cellular functions.	2.29682e-23
CP012670.1\|AUX20054.1\|670815_671073_+\|transglycosylase	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	3.07935e-10

>CP012670.1|AUX20054.1|670815_671073_+|transglycosylase
MSFVLFLLFGLVVGALARLIVPGREPGGWVVSMIIGVVGSFVGGLLGRMLFMYEEGEPAGFFMSLIGAILLVAGYHAIARRSSAV
>CP012670.1|AUX20053.1|669809_670244_+|uncharacterized-protein
MKPLMTHIALHVSNLDASLAFYREFCGLKVVHERVDEGARVVWLAEDGKERAFVLVFIEGGRRAPQAPDDMSHLGFALESRDAVDEIASRGRAHLVWPPRDLPYPVGYFCALRDPDGNIIEFSHGQPLGPGAEARDTAVFGARG
>CP012670.1|AUX20052.1|667968_669354_-|cystathionine-beta-synthase
MMRGALGDITKAVGDTPIVKLNRVTEGLDSDIYVKCEYLNPGGSHKDRVALNMIRDAEANGLRPGGTIVEATSGNTGAALAMVSAVRGYKCIFVMPDKMSQEKIATLRAYGARVVVCPTAVEPDDPRSYYQVAKRIAEETPNCFYANQYHNPSNPGAHMASTGPEIWAQCGEELDVFVAGMGTGGTLSGTGKYLKERKPGIKMVGVDPVGSLYYDYVKTQRITKPFAYKVEGIGEDFFPSTMNLKIIDDVIRVDDRECFLMTRDLVRLEGLFVGGSAGAAVAGAIKYARQSGKRENILVLLPDGASKYISKIFNDDWMRENGFLEEDKGLGTVRDLLVAKPSGAVVTADASARVSEVIDMMKSHGISQLPVTEGGKLRGMVHEVDLLRHLVKGSGTLDSSIGGLVESDYATVTPATKVELLKGVLSDAKIALVVDEETVLGVVSKIDLIDYLARKATPQVG
>CP012670.1|AUX20051.1|667644_667908_-|acyl-carrier-protein
MTLSLDTVRRELHDHIVNEILLRKAPLAPDEDLFDAGFDSMSLTRVLVFIEQRFGVKIPDEDVVLDEVSTVDRMARFVAGRAAAAQG
>CP012670.1|AUX20050.1|666125_667634_-|AMP-dependent-ligase
MVGPYRLRAEDLAARGAAVALASLSPGARVTYAELAARAAAVRAALAGAGALPGDRVALLSSGRAHDEPVALAAALTAGAVAVPLDATAPPARLGRMARARGCRALLLDAAAARLADGIDAELGAPLPRITLDADGRVLAAPPPAPADGAGGARGEPGPPEVACILHTSGSTGEPKPVPITWAGLDAFTAFCVDLLGLSPADRVLRVAELLFDLAWFDHLATFRAGATLVTMARRDLASGRALRDAVHALAPTVIYGVPSMFMKLVAALPAAGAGAPAAALSPPVRAILFAGEVFPPRELAALAARAPGAALYNLYGPTETNVCTFHRVDRAALDGVSEIPIGAPCPYATCALVAEGEDGRVIDGPGTGELVVSGPTTVGGGPYRTRDRVERKADGLLYFRGRIDRMVKVRGYRVEPGEVEAALASHPAVRQAAVVAVEDARLGKALRAFVALSGDAGDADDRSLRAYLAERLPPYMVPERVVAVDELPRTSTGKIDYRALA
>CP012670.1|AUX20049.1|665620_666088_+|alkylhydroperoxidase
MQSRIEYARVAPETYRAMLAFSACAKRCGLEEALVHMVLLRASQINGCAYCIDMHWKDARAAGEGEQRLYGLSAWREAPYYSERERAALAWTEAVTLIAEDQAPDSVYDAVRAHFSEKELADLTWLVASINAWNRMAIALRKVPGAYQPPARPKT
>CP012670.1|AUX20048.1|664418_665564_+|hypothetical-protein
MKITNVSGAFALLLLIAATGACGKGEEAAPANATAEVTASAEAAIGEGAYVEEHESGKAAFHVAADGSVKAAVLGPDGEPIREDVTGTLLWKDASGEKTVPLTFDSKAGFLVAAGPKLEADLTQIGYTLNVAGKPWSGTLHVPAGGTAELFANAKASADLALPEGKLGPHGGRIEIVGDDRLELLVDEVTGEVRVYVLDADLKPVDLGERKITLGVVAEAPQVVVLAPVAASVAAGATAGAYLTGKLALAADPLKLTIAVRNAGRSAVALCGYRAGAAFAVHARAPRVKVRVKTDWHAHAVADLRAKADLDPKVHVHAGAGAAAKARANAKAKANVHVKAPSVRVTPPSVNVQIKAPKIEIPKPSFKASASAGASAKMKLH
>CP012670.1|AUX20047.1|663660_664191_+|hypothetical-protein
MKQLTHLGALMTVLCLAACGGEGADIAPTDTAMSSKQLKDLTADDVQSTCDALKARVKLSKEDTCEYLGLIAAPALGKSCSTLKDECLAAPEESTEGQAADASCMPPTDQRAGCTATVAEYEVCLIAQTDVIRALTCDSTLSALEAAPPACEALARKCPQLIPEGEDEGGQGTDNP
>CP012670.1|AUX20046.1|662746_663583_-|uncharacterized-protein
MCTIGAHDSTNQDNAIRDTGSARRGNTILLGASRGPARGGASAGPPAPRRGHAACSRLSASPTARPRATAGARQTCRRVGRRMTSCRLDGWRDSYPAAMPPMSGAPPDAARCRPRAALTDPLSAFAARRPVPLLLHDLPWADESSRGVLEHLDAMDGPARRLWAAAPTTRSGAACPWRRRASGTSPRGTSRATPRKRARQIARAHALPATPALPSWRGRAVRLRDRPGRAGGDADAQAATRTRRARRNVRRRDQGLRFAISGAASRQALNRSARASVG
>CP012670.1|AUX20045.1|661113_661974_-|hypothetical-protein
MLTLAPDVRQAWLDRIRWIRIVDRLAENERIEPHERRFSRFMEDWRRLLSRGIVDPSCPFASELLAIRALWLRDASGPGSDLAEGRRGGDDMAARSLAAWDAYLLALADYHAPGLLIRTMKEHDTMLLRLSGHIFQLVPFLTKEHWDAAAEFGRLDQFFNNLRDMQEDADRGICYLPEEELARHGLTRAQVLSGRCIDTPGYRSLMQLWLDEIMPSLYARAAPFIDAHDLHPSLQMMKEWSLRRYARITRVFRATGFDPRRFPARYWAEVRRDLAERRQLCRAQPA
>CP012670.1|AUX20056.1|672654_674550_-|chloride-channel-protein
MKGMDDMKGAPPAPPAAAEGIPVAPSMGPALEDLRVPTPGAAVDRRVVLLSGLAVAIAGAAFLAAELLTALIAVITNLAFFGRLSAAPASPAESHAGWLVLLIPIAGALVVGVMARYGSQAIRGHGIPEAMEQVLYNQSRIPPRMTLLKPLSSAVAIGTGGPFGAEGPIIATGGALGSLVGQVLRITADERKTLLAAGAAAGMSATFGSPVSAVLLAIELLLFEYRPRSVIPVALAAAAAAAARFMAGQTAPAFEMPAVAPSTGPALAFYIALGAALGVAAMGATRAIYAIEEAFERIPLHWMWWPAIGAVAIGVVGYFAPRTLGVGYDNIDDMLSGRLALGALLSLSLMKFISWSIALGSGTSGGTLAPLFTVGGGVGAALGLVAGALWPSLHVDARVAALVGMAAIFAGASRALLASVVFAFETTRQPMGLLPLLGGCSAAFLVSSLLMRHSIMTEKLARRGARVLAEYAADHLALLAVRDAASRPAVTLAADDTVAAARTFLLSQAEGSRHQGFPVVDERGELIGVITQRDVLGPQPGELRLRHLVRRPPAVVFEDCSLREAADHMVTEGVGRLPVVSREAPRKVIGMLTRSDLLDAHRSRLDAAQRAEQAIARRRGDLSGAAGGARA
>CP012670.1|AUX20057.1|674551_675025_-|MarR-family-transcriptional-regulator
MDALRAIVQRLRVASRACERQLGLSSAQLFVLQQLDQAAASSISDLARRTLTHQSSVSVVVTRLAERGLVTRRASPEDARRTEIALTPAGRALLRRAPRTVQAELVAAMDRLPAAERRGLARSLTALARAIGAGHEAPPLFFEGEDARSGAVARQER
>CP012670.1|AUX20058.1|675268_676129_-|uncharacterized-protein
MQSGAARKALAAADPTVYPVEDDVGEGSLQRFISELLRALIERWLDSRSKSRRKPVFVGADQFFYWEQYNPIEGIAPDVYVLPGVDRSTRVGAWKVWETGLVPSFAFEIVSRDIDKDYINSPAKYARLGVEELVVFDPDYQESRSRVRWQIFRRTKRGLLRVESTDADRIRSRVLGCHLRVVGEGGEMRVRVAYGANGETLLPTDAEALEQAEAERQRAEDERQRAEDERQRAEAERQRAEGERQRLAEALEAERRAREALEAELARLQGLQPESPRRPRPRKAKR
>CP012670.1|AUX20059.1|676256_677204_+|glycyl-tRNA-synthetase-subunit-alpha
MTFQDLILALQKFWAERGCLIVQPYNSEVGAGTFNPATFLRALGPEPWNVAFVEPSRRPADGRYGENPNRLQQFHQFQVILKPSPIDIQDLYLESLRAIGTNPLEHDVRFLEDDWESPTLGAWGLGWQVWLDGLEISQFTYFQQVGGFDCRPVSGELTYGLERIAMYLQDKDSIYDVVYSDRGGKIVRYGDLYQRAEWEWSTYNFEEADIAEHFAAFDHLEAEAKRLLSRGADPAAKGAVIDPRKALVLPAYDHVVKAAHRFNVLDARGAISVTERQRFIGRVRALARAVAEAYLAQREALGFPLLGEPQAKAAE
>CP012670.1|AUX20060.1|677242_677821_-|orotate-phosphoribosyltransferase
MSASGASERERLVALLRERSFEQKRVVLASGRESDFFIDCKQTVLTAEGHALVGSLMFEALDALPRCDAVAGVELGGCPLASAVSLTSYLRGRPLPALYVRKEVKDHGSRRLVEGDRGLVPGMPVVMLEDVITTGGSTLKAVEKLRAAGASVVGVIALVDRLEGGADAIRAAGLPLVALCTRRDFLPDMPPG
>CP012670.1|AUX20061.1|677817_678534_-|uncharacterized-protein
MVAQSTIGPTTAIRGNVQGDGDLEILGRVEGSVVMTGDVTIGEGALIQSDVRGRRVVVRGAVAGSIFGEEAVVLEPGARVVGDLGAPQIGIQPGALVRGNVTTGAPRAAAAPAPRAAAVAAAPAAAAPAAPPRATAPARPARAPAPAARPAPAPRVAPAPPARLAPAARSAPAEARPAPEPRHAPVHEDEEAELSASAAGGEAEEPEAAEGAGGPPPPVVPALRKGAAKASLRKKGGR
>CP012670.1|AUX20062.1|678537_678852_-|hypothetical-protein
MAGTIIGNGLTIEGEITSDEEVIIAGTVRGKLTVEGGLTIDAGAQVEADIGAASLQVGGNVTGNVTAADRVDLLAGGRLVGDVKASRLTIADGASFKGNVDMDV
>CP012670.1|AUX20063.1|678906_679332_-|hypothetical-protein
MARGSTTTRSTSEATDSLIGRGARIRGRVHGDGSLRVEGSVEGDIQLTGDLEIEDGASVTGDVEASSLVVAGQLTGDVTSRGPVTIRATAQFAGDIGGSEVVLEEGATFAGRIEVEFDLPVELSERTGARAQGPRREPAGR
>CP012670.1|AUX20064.1|680242_681634_+|oxidoreductase
MRKIAIVGSGQAGLLAAHALVKAGYDVTLFSDRTPEQWLNESKPTGTAARFDMALELERELGLALWEDAAPKGRAAHLTACAAPANRLLTLAGRFRRPFVAIDVRLQSHRWMLELEARGGKVVIESVTVERLDQIAAENDLTVVAAGRGDLCRLFERDAARSVHAEAKRNVTMMCVTGPKLGFDCVPLLPVKFNLFAGVGEAFWVPYHHKDVGPSWNCLFEAVPGGPLDRFQGARSGEEIVAIAKPLIKELAPWDYEWFKSAELSDKHGWQNGRVVPVVRKPVGRLPSGRIVTPLGDTAMALDPIGGQGANCGNKMARNLVECIVQHGERPFDADWMTRTFERFYARHGGPIDRFNNLLLDGASAGVFHLLFAQYGSDGRADNQSGQQALADAFVNNFNDPAELTDILADVGRIRAFIQQKTRRPWPLALAAGGVGVGIAQVRQRLGLPPGHPASTHVSSAPA
>CP012670.1|AUX20065.1|681677_684983_-|hypothetical-protein
MIPAAVLRALPCAVTLAGALAFAALLRVALRRGAARRPILLAWMVAGALPALHVGLVWCGLLEDVYLRLARPWGTLLALGATSFIALRYLALARAAPHAQRQGPWRARLRDLLTPLAGFAAAMAVAGPELGRPLDRLTVLLAIDRSRSIDLVPSADERIAHELSVAELGMREDDRIATIVFAAGAATEDPPRPRSQLPAPQRVALGRDGTDLAAGIRRALAEVPSDSAARVVLLTDGVPTRGDTMAAAAAAVAAGLPIDVLPLEQRLVPDVRVVALRAPARADEGEALDLRLVTSSPAPAEIEIRLRRDGELIARADASIAAGEDVLRIREVAPGPGLHRYDVEITAKDPALDGAAEDNAGSAFLRVRGPAAALVLEGDAGQGAFVARALADGAFRVDEGDLGRVPADLGGLAGYDVVVLSDIRASDLSPGQIDALASYVRDLGGGLVLMGGDRSMGPGGYARTPLEEVSPVSFDLKQERRRASLAEVIGIDISGSMAASAGAHTKLELANEAAARSASLLGPGDRLGVAHVDTVVKWSVPLGPVTDEAAIDRAIRAVGPGGGGIFVDITLAAAYGALDREAVNLKHVLLFADGSDAENMGSSRAMVEAARRRGITTSVVALGQGSDVPELEVLSRLGGGRFYLVEDATRLPAVFTQETILAARSAIVEEPFRVAPGAPSSITAGIPFGEAPPLAGYVVTLPKGRATVLLSGPEGDPILAVWPAGLGRAAAFTSDLKDRWGAAWTRWPGAARMIAQAARDVARKAEDPRVRLDATASGGELSVRASVVGDDGRAQSFRRLVVHVAGPGGFSRELPLEATGAGAYTAALPLSRPGTYIAVARDELTGEAVGTTGAVMTAGEELRPTGSDLSLLGRIAEFTGGKRRDTLAGIFEDRGTRRFAYRDATPPLVLVAALGLLLAVAARRLAVPEAALAWGARAGERLRARRRGAGAAADPAATGATVGALLSARQRGRAEREGQPSRGAGEAGGPWRAQPGSAAAGPQPGSAAGPQPGSVPQPGSAAGPQPGSVPQPGSATAGPQPGSVPQPGSAAGPQPGSVPQPGSVVKFTSQGTHAAEARAEAPEGRPLTAAEKILARRRGRI

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Crispr_ID: CP012670_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_10

831603-831683

Orphan

Consensus_repeat	Method
CCCCCTCCGTGGGCCGGGCAGCTCGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_10

>merge|CP012670|10|831603-831683|CRISPRCasFinder
CCCCCTCCGTGGGCCGGGCAGCTCGGCGAGGCCCCCGCAGCGCGCGACGAACACCCCCCTCCGTGGGCCGGGCAGCTCGGC

>CP012670|10|9|831603-831683|CRISPRCasFinder
CCCCCTCCGTGGGCCGGGCAGCTCGGC	GAGGCCCCCGCAGCGCGCGACGAACAC
CCCCCTCCGTGGGCCGGGCAGCTCGGC

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX20181.1\|825999_826998_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225325
CP012670.1\|AUX20184.1\|831990_833922_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|381269
CP012670.1\|AUX20179.1\|824575_824950_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX20175.1\|819829_821164_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
CP012670.1\|AUX20178.1\|823042_824143_-\|PHB-depolymerase	unknown	unknown	gnl\|CDD\|226040
CP012670.1\|AUX20176.1\|821237_821684_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|179149
CP012670.1\|AUX20187.1\|836377_837031_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX20193.1\|843461_843842_-\|molecular-chaperone-Hsp20	unknown	unknown	gnl\|CDD\|107221
CP012670.1\|AUX20177.1\|821680_822907_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236046
CP012670.1\|AUX20190.1\|839136_840075_-\|glutaminyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|235573
CP012670.1\|AUX20185.1\|834025_835885_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|270916
CP012670.1\|AUX20174.1\|818445_819423_-\|2-keto-4-pentenoate-hydratase	unknown	unknown	gnl\|CDD\|223257
CP012670.1\|AUX20191.1\|840172_842041_-\|glutamyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|234953
CP012670.1\|AUX20189.1\|838782_839028_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX20182.1\|827476_828010_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX20188.1\|837337_838621_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
CP012670.1\|AUX20180.1\|825282_825972_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX20192.1\|842629_843421_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223003
CP012670.1\|AUX20183.1\|828293_830621_+\|DNA-helicase	unknown	unknown	gnl\|CDD\|226482
CP012670.1\|AUX20186.1\|835964_836363_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|198318

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX20181.1\|825999_826998_-\|hypothetical-protein	gnl\|CDD\|225325	COG2605, COG2605, Predicted kinase related to galactokinase and mevalonate kinase [General function prediction only].	9.24478e-29
CP012670.1\|AUX20184.1\|831990_833922_+\|uncharacterized-protein	gnl\|CDD\|381269	cd12131, HGbI-like, Hell's gate globin I (HGbI) from Methylacidophilum infernorum and related proteins. HGbI is a single-domain heme-containing protein isolated from Methylacidiphilum infernorum, an aerobic acidophilic and thermophilic methanotroph. M. infernorum grows optimally at pH 2.0 and 60C and its home is New Zealand's Hell's Gate geothermal park. The physiological role of HGbI has yet to be determined. It has an extremely strong resistance to auto-oxidation, and has fast oxygen-binding/slow release characteristics. Its CO on-rate is comparable to the O2 on-rate, and it is able to bind acetate with high affinity in the ferric state. The coordination of the heme iron changes in the ferrous form from pentacoordinate at low pH to predominantly hexacoordinate at high pH; in the ferric form, it is predominantly hexacoordinate at all pH.	8.56443e-70
CP012670.1\|AUX20175.1\|819829_821164_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	1.37555e-06
CP012670.1\|AUX20188.1\|837337_838621_-\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.57529e-63
CP012670.1\|AUX20176.1\|821237_821684_-\|hypothetical-protein	gnl\|CDD\|179149	PRK00872, PRK00872, hypothetical protein; Provisional.	3.30454e-39
CP012670.1\|AUX20177.1\|821680_822907_-\|hypothetical-protein	gnl\|CDD\|236046	PRK07538, PRK07538, hypothetical protein; Provisional.	0
CP012670.1\|AUX20185.1\|834025_835885_+\|uncharacterized-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	8.521e-91
CP012670.1\|AUX20174.1\|818445_819423_-\|2-keto-4-pentenoate-hydratase	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	1.12068e-38
CP012670.1\|AUX20191.1\|840172_842041_-\|glutamyl-tRNA-synthetase	gnl\|CDD\|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	7.36819e-142
CP012670.1\|AUX20190.1\|839136_840075_-\|glutaminyl-tRNA-synthetase	gnl\|CDD\|235573	PRK05710, PRK05710, tRNA glutamyl-Q(34) synthetase GluQRS.	7.28396e-84
CP012670.1\|AUX20192.1\|842629_843421_+\|hypothetical-protein	gnl\|CDD\|223003	PHA03169, PHA03169, hypothetical protein; Provisional.	4.12262e-05
CP012670.1\|AUX20193.1\|843461_843842_-\|molecular-chaperone-Hsp20	gnl\|CDD\|107221	cd06464, ACD_sHsps-like, Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.	1.31753e-21
CP012670.1\|AUX20178.1\|823042_824143_-\|PHB-depolymerase	gnl\|CDD\|226040	COG3509, LpqC, Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism].	3.7969e-15
CP012670.1\|AUX20183.1\|828293_830621_+\|DNA-helicase	gnl\|CDD\|226482	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only].	6.94896e-28
CP012670.1\|AUX20186.1\|835964_836363_-\|uncharacterized-protein	gnl\|CDD\|198318	cd03209, GST_C_Mu, C-terminal, alpha helical domain of Class Mu Glutathione S-transferases. Glutathione S-transferase (GST) C-terminal domain family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases including cancer and neurodegenerative disorders. Some isoenzymes have additional specific functions. Human GST M1-1 acts as an endogenous inhibitor of ASK1 (apoptosis signal-regulating kinase 1) thereby suppressing ASK1-mediated cell death. Human GSTM2-2 and 3-3 have been identified as prostaglandin E2 synthases in the brain and may play crucial roles in temperature and sleep-wake regulation.	0.00180762

>CP012670.1|AUX20183.1|828293_830621_+|DNA-helicase
MTVNRSTSSTHTEEQSREPASATQPAQSATQPVQRDGAPGPQLSERGAAIVRDEEGLLARVTAHLASATAKPSRPPPVENYEEQLLSLRDQIAAARLEDVPALVQQMERLQGIAARRNENVVEPVDPKSPYFGHLRLREKGRPDRDVLIGRTTLIDASAGVRIVDWRHAPVSQIYYRYEEGAEYEETFGEREVEGTVLVRRTVTIDNGELYRISAPQGTFVRMPSGFREIATRATELAGGQGSAVRPEDMRDIALAGAAAARGGLGTGATFHAREDRHLPEIAALLDPRQFELISKPDSGIVVIQGGAGSGKTTIGVHRLAFLAYNGGRRFTADKMLVIVGSPALRAYISEALPALGLAGIAVETFSEWARAARKRAFPWLEAPVEENTPSVVTRYKTHPAMLHLLEQRASELKDDARARRDSRGTIAFWADVLTDLDRVMAAFEAAGDPEFGPEQVKRAWRWCADRCPAVVELDPGDRAERKAALADEPADEDDERGADAREVTSDDRAVLDPEDDALLLRAYQLLRGELRKGKNVLTYEHLFVDEAQDLAPIDLAVLLGVVAEPRSVTLAGDTAQRLFMDSGFRDWRATLDDLGLSRVDVEPLRIAYRSTREVLAFARGVLGPLADPTPPLAPRSGAPVEHHHFPSAGAAVAFLADAIRPLFAREPRATLAILARHPEQADVYYDALRMAEIPNLRRVRAYEFAFRPGVEVTEIRQVKGLEYDYVVLVDVNASTYPADDEARHLLHIGATRAAHQLWVISTSAPSPLLPDWLG
>CP012670.1|AUX20182.1|827476_828010_-|hypothetical-protein
MQNCATRSDRLLELILFSLRDRGALCALVLASYRVELTCLLDRISSGSIGDDDDAMGGDEEEERVRVTGGRRDRSVRAAVRGGAARARRAEPGISEEDAFLLYDLAGRIAEAAAAARLPVIRRDALTLREKAAEVHAGGERAEREMLAAGLRVIDRILDAARAQPAPRREPAGKDLN
>CP012670.1|AUX20181.1|825999_826998_-|hypothetical-protein
MRVSFAGGGSDLPGVARDGGGRVVGAAIDVRVRVVVEPFDRGWVRMESASRGPARPAGGPGAAAPQVVTRRRAEPARDDVAFRLIEATLSATGVDDGVALRVETEMSPGAGLGGSASVAVAALFALRASVGDAAAPEELAREAVALERERLGNACGAQDQVFAAFGGLLDLTFDARGCSGVRPLPVGCPDLVPALSAGLLLVDTDVRRVSGEILDRMEVGSASDAKGALVAAAGEVARGFELGSLALVLSGMRRGAAAKMRLSGAASALALSLQERLDGLGVEVLRICGAGGGGHVLVWAPAERHARILDALGPRVVRRPSLGAPGVRLEPA
>CP012670.1|AUX20180.1|825282_825972_+|uncharacterized-protein
MMKKLGTAFELVVCAGAALGLTACLGADASYEPIEPLGSQSSEILAGGPDDQVVLYDLPGFSGDSQSFGIGRYDIEALAIDNRASSIRVPAGLRVTAFANPEFGPEAHVFTSDVAVLADVGPAVDNFISSLVVAHASDPQLDAVTFYKDADFSGDSFTFGVGANLLFASPWTPWEAQISSVRVPPGFKVTLSTGWITWYDPETLVLTEDADLADHNFDDKTLSFMVERL
>CP012670.1|AUX20179.1|824575_824950_+|uncharacterized-protein
MDNDKPQNPTPSLTDRMGVMAAAQAAQEPFFLGRLRGHFGADPRALPVVAEELPASDHPDFQLAIETHLRDGGFTSELLGIFLSTTNPGIVHGVAAYSGRDPRAVAGRAGYACLRISGHDGPLV
>CP012670.1|AUX20178.1|823042_824143_-|PHB-depolymerase
METLRNFGTTTPGLVALAALAALAALACSSQGDATAEASSGSDGAGGYAGPDTSGSGAAGGSSATGGPSATGGPSATGGSPATGGPSGGVSGAGGSGGRPASGEGGAGGAGAAGSGAGGAGGEAQSAGCGSATAPTSGRFSIDVGGTKREYILAVPDDYDPSRAYRLIFAWHPLGGSAEQVATGFGGGYYGLQSRADGSAIFVSPEGLDQGWANTGGRDIAFLRAMLDRFRAELCIDQSRIFSTGFSYGGMMSYAIGCAMGDVFRAIAPMSGALYSGCEDGDNPVAMWGAHGNADDVVPVEQGRSARDVFLERNHCDPQATPVQPEPCVSYEGCDAGYPVVWCEFSGGHAPVSNSGESIWNFFSQF
>CP012670.1|AUX20177.1|821680_822907_-|hypothetical-protein
MRVIVVGAGIGGLAAALALHASGHEVTVFEAAPSILPLGVGINLLPHAAEVLDELGLVEVLLAHGVATRELVYFNRFGQRIWGEPRGRFAGHAAPQISLHRGALQGVLFEATVERLGSDRVICDRRLSDHEEGEGRIVARFLSREGATWKVPADLLICADGIHSAARAGLYPDEGPPVYGGRILWRATSMAAPFLTGASMIMAGHQDQKFVAYPISPPGPDGRQTINWIAELAVAESLRREDWNRRGDPADFLPRFEDWRFDWLDVPGLIRGAEAIYEFPLVDRDPLPRWSHGRMTLLGDAAHPMYPIGSNGASQAILDARALVRALAAHADPVEALAAYEAERLPATAAIVAANRGNGPEQCMQIAQERAPDGFDRIEDVFPPGELETIAARYKVLTGLKRASEPLA
>CP012670.1|AUX20176.1|821237_821684_-|hypothetical-protein
MSPPLSPLMTLEVAVAPPVTVNPGSPGRRFIPIVGGTVAGGLEGRVLPGGDWQTIWADGRMDISAHYILDIAGHGTVEILSEGVRAGPPEVLAALGRGEAVDPGRYYFRTAIRMRTSAPGLLRLNAVLALSVGERLADRVRLTVYEIG
>CP012670.1|AUX20175.1|819829_821164_-|hypothetical-protein
MSTQTRAARRRGDAGAGILAVVLGIVSFNLPARAQAQPEAPPAPTGEDAPIAAPATGPASPPADASAARAPSAEAHAGAPALRDTAGPGPAPPAPPTEDGPWKNPLSVAAWARVGGRLQNPSARERMDRLLGDGELDLMFSGEINRFIGVQGAIVAQFGPTPTGGNIAGSATLRDAIAKLKFHDLLNVWIGRMIVPSDRSAFSGPWSMGPWNYPGLFEPYAPPIGPRQGPFGRNDGVTAWGKVAGGLFKYYVGAFNLHDSSVSPLYTVRLNMSLLDPEPAYYQKSTYLGEKSILALGVAAEVQRGGSVETLPPPETGMPPGVPRKDTYGEINADLLFEKNLGAAGTVTLEGAVYKYLGDFERFDYSYFALASYLTPSDIGVGKLQPLVRLQQAKPKGADPYLLIDAQMGYIIEGHAARVAFGYQRSDLSGAKGNALFLGVQVQK
>CP012670.1|AUX20174.1|818445_819423_-|2-keto-4-pentenoate-hydratase
MKLASLRGPGRDGTLVVVRRDGLACAPAGSAFPTLQAALDDWERAEPALRRIADDIERGGAAVAPLAVEALAAPLPRAYEWIDGSAYIHHIELVRKARGAEPPETLTTDPLVYQGGSGVLLGPTDDIVLRDEAWGLDFEAEVCAVLGDTPQGTRRDEAHRHIRLFLLANDVTLRNLVPAELAKGFGFFCSKPATAFSPFAITPDELGDALRDGRVHLRLRSTYNGALIGDPEAGPEMHFSFFDLIEHIARTRGFTAGTLLGSGTVSNRDPARGVSCLAERRMLEILERGAARTPFMRPGDTITIEMLSRSGESLFGRIAQRVVAG
>CP012670.1|AUX20184.1|831990_833922_+|uncharacterized-protein
MAKPNDPFAPPVNTRGPAPAGDAAKPQRGAAPAPPRTSPAAAGPATQRGPGAYGAPDFLSKAARNVPAELLNPRTVELVQWSWAKVVPISDAAAALFYERLFTLDPSVRSLFKSDMAEQKKKLMQMLAVAVEGLNNPSKLVPVLQSLGARHQGYMVTDHHYDVVGEALLWTLREGIGDAFTSEVESAWKDVYGVLADIMKKAAAAHAGGGATQALSPAARDASRPNAPPPARSSSPRPPPGPAQRPHSVPPPSSGMAARTLVGVVAPMPSDPGVPAAGAGGGATPSPRTIELVQRSWAKVMPISDAAAALFYDRLFQMDPSVRALFKNDMGEQKKKLMQTLAVAVDGLSNLNKLVPVLQALGVRHHGYMVTDHHYDLVGEALLWTLREGLGDGFTRDVETAWKEVYGLIADVMKKAAAEHVAGGGAREDAARGPRQPAQRPPLSEPRPQSVTEVMPPKRRRPVDDEDDTLHYQTNPAHDALAGHGGSWPDSERSPRGAAGARAPAPAAPQGFVIPLAGQDMVLNVQVKLDGPPPAAPIVVSAPAPAALEPTGPSGLVAGLAIALVAVASSMATAILFTVGQPDRAPSGAGAAAGGAALSVASLATYAVPIIVTVLVLSAFTMGHILGRGRARGGAGDAGPGSP
>CP012670.1|AUX20185.1|834025_835885_+|uncharacterized-protein
MLSHLAGQWLGPFQLIQLLGIGAMGAVYLARDSVLQRDVAVKLIAKGSADTDPERRDRFLREARAAARLIHPNVVQIFQVGEDEDVRFIAMEYVHGLTTAQAAKQHGGRLPEQFGIEKMREAAAALEMAASFGISHRDIKPANLLLTASGTLKIADFGLASHPESGPLGTTSAARTLEGTPFYMSPEQWTGQEIAPPSDIYSLGCTFYHLLVGRTPFPARDLAGCFQAHCHAAAPDPKLAMPDIDPLLAELLRRCMAKRPQERPSAAHIVAFLEDMLMLRRSSVRPRELPEARRSFLSGVDLADTRISELPMPPRSALATPTGTILVNSSSGVGHFTGQYSYRDHFGLTGYPFSDIRQPSHYWDAGPYAWILRTLASQIVAGQRPAILVGEPGSGRTFVCEMIKNKVPRIQVFSIEPQLLFATRPLVALCRQVGATAVSSNLSQQLLVDAFLGQALLRAGPDAIAVLVIDGLDPDDRELVMELHDILRCAPVGKLSMILVGAPDLPARLAENGAPHELYSGAQSLLLPGMTQQEMMEYIDFRMRSVGGSTRGLKLDIASQQLLHARSGGSPKLINIFCHNALTLTALQGESEVGLSSVRLAMKSKTYLTAEAALNLLRG
>CP012670.1|AUX20186.1|835964_836363_-|uncharacterized-protein
MAETGHELLTEAGALFWNPRFHELRAENRASTGERLELLQSYFIRTRADAEHWVLPGRTTMADVIMAYALETLMPLHPGLVKDFPALHHAMTAFFATDRIRDYVRSDRRFRTWTVSLASFGGKPEETHHWID
>CP012670.1|AUX20187.1|836377_837031_-|hypothetical-protein
MPMDSIIAWAVSLMVAWAPPGLSLIKDAIETPEEGRARYHEIARAAAQVAYDPEQKPVFGGPRGRAETLALLLSIASYESGYRRDVDLGLGKLARGEGVDSCLLQVRVGAGKTREGWSHDDLVKDREKCFRAGLSLIRKSFGACRKQALLDRLSAYTRGRCIEDDKLSRARIGRALRAKRAPMTDEAVLASMPKPEPKPEPIAPPSGPPAAGNGNDS
>CP012670.1|AUX20188.1|837337_838621_-|MFS-transporter
MTADLAALKPSSPFAAFESRDFRAYAAARLLATVAFQMQSVAVGFQIYTLTRDPMALGYVGLAQFLPVAGLSLVTGHAADRFDRRGIVVLCYLASSLAALALFFIARSPSPSVSAIYAVLVLLGTARAFQGPAGASLLPALVPTAHFQNAATWQSTLWQLGAIGGPSLGGLLYGLWGAPAPVYLSSSVALAAACAGLLAVRVRTGRMEKKPPSLATVLAGLRYVRQKKVLLASISLDFMAVFLGGAVALLPLYATDVLHVGPEGQGFLRAAPAVGAGLMAALLAFRPIRRHAGPKMLFCVGLFGLATIVFGLSTSFPLSLAALTVLGAADMVSVVVRMTLEQMAAPPAMRGRVSAVNMVFVGASNELGEFESGTLASLVGAVPTVVIGGVGTISVVLLWGWLFPELRAVDRLEDVRATDEEGAATTA
>CP012670.1|AUX20189.1|838782_839028_+|hypothetical-protein
MEVSTCGKGRRVMMTLQSNTTSPGRARDLAEQARRAWTLFGSRSPRRRDERRDDDDDDFPRPSAVVTLFPLLRLGASPLPA
>CP012670.1|AUX20190.1|839136_840075_-|glutaminyl-tRNA-synthetase
MSGGATGGVCRFAPSTTGPAHLGTLAAALLAWLDARARGARLVLRLEDLDPDRCRPEYARSITEDLAWLGLDFDEQVTQRTRRAHHEAAMDRLEALGALYPCSATREDVRAIGRRAPDGGFAYDNRGRGRALPPGGWRASAEPIRARLPDGVFRPVDEGGLDLSQEPALAMGDPVVRRRDGAFSYQLAVVVDDGAAGVTRVVRGRDIAPSTATQAALQALLGLPAPVYRHHLLLLEERGGKLAKTHGAARAAGIARSAPALCGALACCIGLRERPEPCTPAELLGEFSWARVATADRVVSFREGALRVEAAR
>CP012670.1|AUX20191.1|840172_842041_-|glutamyl-tRNA-synthetase
MQWLPPPAPPHVTDQERHALMDKPALNDTTLPVTVREPGPGEDREELVRLLFGEAAASARRPEEYEARYPRRGLPKGAMVTRYAPSPTGFMHIGGIFVSLINKRLSVQSGGVFYLRLEDTDVKRAIPGALDTIVDSLARFDLSPHEGVLRAPAGQEDGAPGAPPRGAFVQQGSYGPYVQTERVAIYRDYAIDLLRRGFAYPCFCTVEELDAIRQEQMALTVKPGYHGRWARWRDAPLARVKEALASGTPFVLRLRAPDDVSGRVEWKDGVKGVISMPVNDLDTILLKSDGIPTYHFAHAVDDHLMRTTHVIRGDEWISSMPLHLQLFRVLGFRPVEYAHVPPIQKLDRVEEADPETGETRVSDARRKLSKRKDPEANIEYYREIGVPEAATIEYLLNIANSAFEDWRKANPEKPYTAFPLKLNKLAPGGALSDLVKLKSVSQSVVSRMSAEDVYAQGLDWARAYDKELAALMERDPEYTKRALGIERGGKKSNKRIVTWQDLRTQLFFFFDELYDRVEALDFPENIPEGERKSLLRQMLDVYDPADAKEAWFEKIRGIAVASGYAGEVKQYKASPGSWKGHVGDVSMALRVAVCGTRNSPDLTEVMAVMGEPRVRARIARFL
>CP012670.1|AUX20192.1|842629_843421_+|hypothetical-protein
MLSMDTPGRTLLVPTLALALIACANGTNDLMPGYEEQAGGGGGGVGGEETGNGSGGDAGGAERPASGADRPASSSMSSAGTGSIAGEAGNAGTEGEGGDGGEGAGGEDGAGEGGEEGGGEEPACDYGAPAMCSGAEALREIAGDVGSDSVVTRGSTSRWFKINIADDSGSTDRISFTARLTSPPGMNFDLFVYQGDSDAPDCYASGTKGTGSPDEVVAAGWNDVPIFETNRWLSIEVRYVSGTACGSEATWTLTVQGNTESGS
>CP012670.1|AUX20193.1|843461_843842_-|molecular-chaperone-Hsp20
MSTDRSLTHRPESAPEKIQQRPAVPPAVDIYENAEELLVVADLPGVAQEHLAVRLEKGELTFEGRRTEAAEREQGADNLPDYRRSFVVPQGIDADKISAELQAGVLRIHLPKSASLKPRQIPITAS

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Crispr_ID: CP012670_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_11

1096375-1096468

Orphan

Consensus_repeat	Method
TCCGTCGCCGCAGCGCGCAGCGCGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_11

>merge|CP012670|11|1096375-1096468|CRISPRCasFinder
TCCGTCGCCGCAGCGCGCAGCGCGTGGACGCGCAGCGCGCGGGAGACGAGCGGGTCACGCAGTCGGCGGTCCGTCGCCGCAGCGCGCTGCGCGT

>CP012670|11|10|1096375-1096468|CRISPRCasFinder
TCCGTCGCCGCAGCGCGCAGCGCGT	GGACGCGCAGCGCGCGGGAGACGAGCGGGTCACGCAGTCGGCGG
TCCGTCGCCGCAGCGCGCTGCGCGT

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX20368.1\|1097136_1098276_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|188247
CP012670.1\|AUX20363.1\|1077757_1085272_+\|beta-ketoacyl-synthase	unknown	unknown	gnl\|CDD\|274311
CP012670.1\|AUX20361.1\|1074462_1075500_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|238871
CP012670.1\|AUX20359.1\|1072332_1073229_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
CP012670.1\|AUX20369.1\|1098301_1099456_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238119
CP012670.1\|AUX20370.1\|1099834_1101397_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX20364.1\|1093224_1093875_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379470
CP012670.1\|AUX20376.1\|1107568_1108027_+\|30S-ribosomal-protein-S12	unknown	unknown	gnl\|CDD\|235355
CP012670.1\|AUX20357.1\|1067671_1070545_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|236842
CP012670.1\|AUX20371.1\|1101431_1102133_-\|thymidylate-kinase	unknown	unknown	gnl\|CDD\|223203
CP012670.1\|AUX20374.1\|1105594_1106422_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
CP012670.1\|AUX20373.1\|1103066_1105460_+\|polyphosphate-kinase	unknown	unknown	gnl\|CDD\|235469
CP012670.1\|AUX20362.1\|1076079_1077729_+\|2-nitropropane-dioxygenase	unknown	unknown	gnl\|CDD\|240093
CP012670.1\|AUX20366.1\|1095807_1096341_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236999
CP012670.1\|AUX20375.1\|1106453_1107335_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|236138
CP012670.1\|AUX20367.1\|1096549_1096771_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377305
CP012670.1\|AUX20372.1\|1102129_1103023_-\|pantoate--beta-alanine-ligase	unknown	unknown	gnl\|CDD\|376824
CP012670.1\|AUX20358.1\|1070899_1072159_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236046
CP012670.1\|AUX20365.1\|1093871_1095311_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379114
CP012670.1\|AUX20360.1\|1073317_1074193_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX20368.1\|1097136_1098276_+\|hypothetical-protein	gnl\|CDD\|188247	TIGR02795, Uncharacterized_protein_in_oprL_3'region, tol-pal system protein YbgF. Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction.	1.03723e-06
CP012670.1\|AUX20363.1\|1077757_1085272_+\|beta-ketoacyl-synthase	gnl\|CDD\|274311	TIGR02813, omega-3_polyunsaturated_fatty_acid_synthase_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.	0
CP012670.1\|AUX20361.1\|1074462_1075500_+\|uncharacterized-protein	gnl\|CDD\|238871	cd01833, XynB_like, SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.	3.594e-51
CP012670.1\|AUX20359.1\|1072332_1073229_+\|transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.76508e-66
CP012670.1\|AUX20369.1\|1098301_1099456_-\|hypothetical-protein	gnl\|CDD\|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	3.19306e-12
CP012670.1\|AUX20375.1\|1106453_1107335_-\|uncharacterized-protein	gnl\|CDD\|236138	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated.	2.30858e-12
CP012670.1\|AUX20364.1\|1093224_1093875_-\|hypothetical-protein	gnl\|CDD\|379470	pfam14103, DUF4276, Domain of unknown function (DUF4276). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 190 and 224 amino acids in length. There is a single completely conserved residue E that may be functionally important.	3.33874e-05
CP012670.1\|AUX20376.1\|1107568_1108027_+\|30S-ribosomal-protein-S12	gnl\|CDD\|235355	PRK05163, rpsL, 30S ribosomal protein S12; Validated.	1.40969e-83
CP012670.1\|AUX20357.1\|1067671_1070545_-\|histidine-kinase	gnl\|CDD\|236842	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional.	3.44477e-60
CP012670.1\|AUX20371.1\|1101431_1102133_-\|thymidylate-kinase	gnl\|CDD\|223203	COG0125, Tmk, Thymidylate kinase [Nucleotide transport and metabolism].	8.51062e-53
CP012670.1\|AUX20374.1\|1105594_1106422_-\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	1.11649e-09
CP012670.1\|AUX20373.1\|1103066_1105460_+\|polyphosphate-kinase	gnl\|CDD\|235469	PRK05443, PRK05443, polyphosphate kinase; Provisional.	0
CP012670.1\|AUX20362.1\|1076079_1077729_+\|2-nitropropane-dioxygenase	gnl\|CDD\|240093	cd04742, NPD_FabD, 2-Nitropropane dioxygenase (NPD)-like domain, associated with the (acyl-carrier-protein) S-malonyltransferase FabD. NPD is part of the nitroalkaneoxidizing enzyme family, that catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites. NDPs are members of the NAD(P)H-dependent flavin oxidoreductase family that reduce a range of alternative electron acceptors. Most use FAD/FMN as a cofactor and NAD(P)H as electron donor. Some contain 4Fe-4S cluster to transfer electron from FAD to FMN.	0
CP012670.1\|AUX20366.1\|1095807_1096341_+\|hypothetical-protein	gnl\|CDD\|236999	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated.	0.00792497
CP012670.1\|AUX20367.1\|1096549_1096771_-\|hypothetical-protein	gnl\|CDD\|377305	pfam04325, DUF465, Protein of unknown function (DUF465). Family members are found in small bacterial proteins, and also in the heavy chains of eukaryotic myosin and kinesin, C terminal of the motor domain (Myosin pfam00063, Kinesin pfam00225). Members of this family may form coiled coil structures.	0.000376611
CP012670.1\|AUX20372.1\|1102129_1103023_-\|pantoate--beta-alanine-ligase	gnl\|CDD\|376824	pfam02569, Pantoate_ligase, Pantoate-beta-alanine ligase. Pantoate-beta-alanine ligase, also know as pantothenate synthase, (EC:6.3.2.1) catalyzes the formation of pantothenate from pantoate and alanine.	2.23987e-137
CP012670.1\|AUX20358.1\|1070899_1072159_+\|hypothetical-protein	gnl\|CDD\|236046	PRK07538, PRK07538, hypothetical protein; Provisional.	0
CP012670.1\|AUX20365.1\|1093871_1095311_-\|hypothetical-protein	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	6.88503e-16
CP012670.1\|AUX20360.1\|1073317_1074193_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.95767e-29

>CP012670.1|AUX20366.1|1095807_1096341_+|hypothetical-protein
MRRLVSSFILLSSSALASGCATYAQDLDRARGHYEANRFEQALALFRVLEHDLDSFPLPQQAQYAYLRGMTDYRLAGLAPQGTGVADPRKGYRDNARHWLGLAAAIEKQTPGGITSEQKIRLSETLTDLNRDVFGGAEALPDSGAATDPAAQPDPSAEPSAAEPPADAPAEPPPPTL
>CP012670.1|AUX20365.1|1093871_1095311_-|hypothetical-protein
MITRFEVDGFKSLRDFAVDLEPLTVFVGPNGAGKSNLLEAIGLLGRLASMSLEEAFKLGRGRIVDQFSRSGGEAGRTIRIAVEVLLQSPLETLEDDEKVLEDNERPLSGRYRYELVIERRVRPSGTEELAIADECLRVADASKGSDGREIVFQQRQERGQIRYVLMRPEDQSQLRTEMRFPRTHSVLGAQKTGALALANFSVRSTEKAVARLEAGQKLSGVSDEDIFNVRILSDQITKQLGIDTPDMQLTGRLADELSRCRLLQLDAARLREPSERIASHELAPDASNLPTILADLPGPALGEIRADLVSLIPGLAGFDVVPDEDTFRIEFKLSGGERFPARLASDGTLRALALLTALHVEPRPSILGIEEPENGIYPGRLRTLLSLLREIATSGDEASLDPAQRATQLLLTSHSPVVLAAFRDSPEHLRFMDLVRRDGRLATRARAVGELKAPGDGAHVVSLREVDALLQAAGSEAAE
>CP012670.1|AUX20364.1|1093224_1093875_-|hypothetical-protein
MTRRHLYLRAGLYAEGPSDYGFLLPLLDRLLPSLAARMFPGTNEVEASLGIDAPPPAQGERAERIAAAIADRWAECTLFVIHADGAGDPASARRSAIDPGIEAARRAAPDVVTVPCVPVRETEAWMLVDVDVFRTLLGSGAQPALPAEPEREADPKLTLARLLKEGGMRRKPERLYRLFGEEVSLEALRMLPAFQRFEAELAEAIRTVARSQGWPG
>CP012670.1|AUX20363.1|1077757_1085272_+|beta-ketoacyl-synthase
MHASSTRIPSIAVVGVSAIFPGSLDAHGFWRDILAGTDLITEVPETHWLVEDYYDPDPSAPDRTYAKRGAFLRDVPFDPLEWGVPPSIVPATDTTQLLALIVAKRVLEDAAGGQFESMSRERMSVILGVTSAQELLASMVSRIQRPVWAKALRELGYPEDEVARACEKIASSYVPWQESSFPGLLGNVVAGRIANRLDLGGTNCVTDAACASSLSAMSMAVNELALGQSDLVIAGGCDTMNDAFMYMCFSKTPALSRSGDCRPFSDKADGTLLGEGIGMVALKRLDDAERDGDRIYAVIKGIGSSSDGRSKSVYAPVPEGQARALRRAYAVAGYGPETVELMEAHGTGTKAGDAAEFEGLRAMFDASGRADRQWCALGSVKSQIGHTKAAAGAAGLFKAVMALHHKVLPPTIKVDRPNPKLEIEKTPFYLNTEARPWVRAGDHPRRASVSSFGFGGSNFHVALEEYTGAAPRALRVRSFPAELVLLSADTPAALADRARALAKDAAAPESLRFFARESVLAFDGARPLRLGLVATDEADLRRKLEQVAAHLGERPEQALDAPLVRCAGGEAPGQVAFLFPGQGSQYPGMGADVVMAFDPAREAWDGAAGVAIADVPLHEVVFPRPVFSDEDRRAQEERLRETRWAQPAIGATSLAHLALLSALGVRADALAGHSFGEITALHAAGALSAADLLRVARRRGELMGAASASSARGAMIAVPRSIDEVRALGLGEVVVANHNGPKQVVLSGAVEAIEAAEARLRGLGIQARRLDVSAAFHSPLVSEASAPFREFLGGIAVGAPSAPVYSNAEIEPYPGGGDAARDRLARQLAQPVRFVEEIERMYAAGVRTFVEVGPGSVLTNLVGDILSGRPHRAVALDRRGKHGVVSLFDAVARLAVAGVPLDARVLWDGFAAPGDPRAASKPKLVLSINGSNYGKPYPPPGGAKALPRPNPPRPAPEAAGAAAAKAPAAAGRAPAPVVSAAAAAVRAPAPVGSAAGGAVSTSAGAVSTSAGAVRVSGAAVRASGAAVSASGGAVRASAGAVSASGPAVSASAAMVSAPASAAVSASGAAVSASGAAVSASGAAVSASGLAVSTPAPAVSASWLAAYQEAQRATAEAHSTYQRAMAESHIAFLQMAEASFAGLAALATGAPHAGAVAAATEPAPVRFLEPRGAPTTPAAGSWGQKHQDGLNGVNGAGRAHQAAVPMAAPAPTPVAMAAPAPTPVAAPAPTPVAASAPTPVAAPVPTSVAASAPTPVAASAPTPVAASAPTPVAASAPTPVAAPVPTPVAAPVPTPVAALVPTPVATPAAVAAAPGVDIERMVLAVVADKTGYPVSMLGLQMELESDLGIDSIKRVEILSSVRDRTPGLSEVDSSALAQLRTLGQVVDHLRASLPAAAPAAPAAAPAASATRAAAAPAAEAAGAPATAAPAASDVERIVMAVVAETTGYPAEMLGLQMELESDLGIDSIKRVEILSAVRDRTPGLSEVDSSALAQLRTLGQVVDHLRASLPTAAPAAPAATPAAGATRAAAAPAAEAAGAAAAAAPAASDVERIVMAVVAETTGYPAEMLGLQMELESDLGIDSIKRVEILSAVRDRTPGLSEVDSSALAQLRTLGQVVDHLRASLPAPAAAPAAGDAASLAGTAEVERIVMAVVAETTGYPAEMLGLQMELESDLGIDSIKRVEILSAVRDRTPGLSEIDSSALAQLRTLGQVVAHLRANLGPAPAADDAGPADAPAPAPLGRFPLVEVPAPAAGLAMPGVFEAGTVVVTGHDTLGPALVAALGARGIAAEHAPAVPRGARGAVFLGGLRDFATVDEALAVHREAFLAAQAIAASPALFVTVQDTGGDFGLAGSDRAWASGLPGLVKTAALEWPAASCRAIDLERSGRSAGDLADAIAAELLSGGVELEVGLRADGRRTTLRSVRQGAQPGPLPLGPSDVIVASGGARGVTAATLIALARESRGRFALLGRTALEDDPAPCRGVGGEAALKAALAQAAAASGQKATPAEIGRQVARILANREVRATLDALRAAGGEAVYVSADVNDARAVAAALGDVRRAFGPITAIVHGAGVLADKLIAEKTVEQLDRVFNTKVGGLRALLDATAGDPLKAIVLFSSIAARSGNRGQCDYAMANEVLNKVAAAEAARRPGCRVKSLGWGPWQGGMVNAALEAHFTQLGVPLIPLEAGARMLIDELRDGPGDRGEGAGASSAGAPSAVEVVLGADPATLAAPDRDRRIALAVRADRAAHPYLGDHAIHGVPVVPVVIALEWFARAARACRPDLVVTALRDVRVLRGIKLAAYASGGEVFRVDCREVESGHGAVLAAELRGPQGALHYAATIEMQPPDGRAAPRGPTPPSLGPWTEGGALYDGHVLFHGPGFQVIRGLDGVSREGIAGTVVGLREAGWVSQPWKTDPAALDGALQLATLWTRHVLGGAALPMSVGALHTFAEGPADGPLRAVVRGQIVARDRTRADIALVDPEGALVAELRDVQFVLRPDAARGQA
>CP012670.1|AUX20362.1|1076079_1077729_+|2-nitropropane-dioxygenase
MVKNPEALRSAGLQPIGVWRSGSWLPAFTSADLQQAVSCVREPVHVVRETPEGRVGVARGGSVLRDDQVNGVPTFPLLGTLPALYPEWLGDRSFTEVHGLRFPYVAGAMANGIHTAELTIAMARAGMLGFFGAAGLGLRRIEQAVDEIVAALGADGPTWGCNLIHAPNEPRLESDTVELYLKKGVRRAEAAAYMGLNPMVVRFAYSGVRRLPDGRIDRRNHLFAKISRPEVAARFLSPAPAEILDTCVRNGWLTRDEAELARGLPVAEDITVEADSGGHTDNQPLVALFPVILGVRDELAAKHGYRRPIRVGAAGGLSTPEAVAAAFSLGAAYVLTGSVNQACVESGLSDEGKRMLAQADLPDVIMTPAADMFELGVQVQVLKRGTMFGVRAQRLYDLYVAHDSIESLPADARARVEREQLQMSCDEVWALCERFFAERDPAELARAAREPKHRMALIFRWYLGMSSKWAIAGDPKRRADYQIWCGPAMGAFNRWVKGSFLEAPQSRTVVQVARNLLEGAAVVTRAQQLRTYGVPVPSAAFHFTPRPLA
>CP012670.1|AUX20361.1|1074462_1075500_+|uncharacterized-protein
MSHSTSSFLSRRGASGAFVRGISLASLLLVGSLACSSASDESSDGSGGSGGASSGGDPTSGAGASGGASTTSGAGGASTTSGAGGATGTGGSGGQAPTGATTGSGGTGGGGQGAGGSASSGGEPSGGAGGGGGSPDAGFQPCPETGPCKILPLGDSITFGLGFDGGYRVELFRLALKDGHEITFTGTQQKNGPETVDGTPFPRNHEGISGQTIQQIAGRVPTPALSEMPHIVLLHAGTNDMWQSANGADARLGALLDELIAEAPDALIVVSNIIPFPQAAGSVTTYNATIPGLVEERASAGAHIVFVDQFTDFPTSELGDGVHPNQAGYARMGRVWYDAISDYLR
>CP012670.1|AUX20360.1|1073317_1074193_-|AraC-family-transcriptional-regulator
MIVEFSAKYGAALTGSDWVGLPLRIGHVPGSGRLEALQAESDAILVWVGGPSQVDIRFAEPTSGEAREHSFERLSGMMDLLPRRTRLHSVAWRGRPSVCTSVNFPEASMSALCSSPFTVLAPDRGPRFGLVDAHVVDLVHRLQAQAVGQEYLGAVYVQSLSLALASYISARYGAGSRAEIALRNARLSSSQRAQIEKFVDRELSSNFGLVDLAAQVGYSPDHFSRLFKHAFRQTPYQYVLSRRIDRAMTMLRDERLSIAEIAQACGFASQAHLTTAFKRRTGMTPGAYRKR
>CP012670.1|AUX20359.1|1072332_1073229_+|transcriptional-regulator
MRELEDLSGLSMFVRIVEEGSLSAAGRALGVPKATISRHLALLEKRLGAPLLIRSTRALSLTDTGRRFFDRVQPIVRDAQRATAEVKSHNAAPSGLLRISASVAYGQAAIAPRLLTFMRRYPAVRIDLHLHDGRVNLVSDGYDLAIRMGVLEDSELVSHKLADIHMVIVASPSWLEQHDMPRRPGDLAGHPAVLTRPDMIHWQVGGETVRVPWRMSTGNMILTRDAARAGLGIALVPEFLASRDLERGTLVRLLPDLELPVIQATALYPRAAGCSAALRALLDDLLSSRPIEVDAAPW
>CP012670.1|AUX20358.1|1070899_1072159_+|hypothetical-protein
MRVLIAGGGIGGLTAALSLHAAGVEAQVVEAAREIVPLGVGINLLPHAVRELTELGLADELAATGIPTAELVYYDRFGDRIWGEPRGIAAGYRWPQVSIHRGELQALLLAAVRRRLGASSVRTGLAVERHEQTGDLVRVALRDRASGAIEEVVADVLVGADGIHSSVRAALHPGEGPPRWNGVQMWRGVTEAEPFLTGRSMIMAGSNLTAKFVAYPISRDAELRGRAAINWVAEVRVGEGASVAPESWTRRGRAEDVLPHFAAWRFPWLDIPALIAGAPAIYEYSMVDRDPLPSWGAGRVTLLGDAAHPMFPIGSNGASQAILDARALAFELATALTPEEALAGYEAERRPATSELVLANRAMGPERVLALVEQRAPHGFARIEDVLSREELEEIARGYKRTAGFLIAELNSRRSWGVR
>CP012670.1|AUX20357.1|1067671_1070545_-|histidine-kinase
MRRPHRRSVGTSKLAKLAPVHRTRVKRARALRAAMPADLQARLHAVLTHAPIVAFSMDERGVITLSEGRGLEALGLRRHENVGESVFDLYRAHPWLTGSVRRALGGETVTAVGELHGTWLEARCAPLRESGGKITGVIGIATDITASKQALDALNQQQAVLKYVIANVPHAIFWKDRQGRFLGGNQNFLNDTNTRVLENLVGRTDFDVWGRREEVEGFVRVDREVMDRGTPILDIEEPLLRPDGQRRVLLTSKVPIRDERGDVTGLLGIYADITERKQMELDLQRAKEAADAAARAKGEFLTVMSHELRTPLSLITGPLQSLLSNPEEPLSPRVRADLERIQRSGRRLRRLVDDVLDYQKIEAGKMQVDWEAVDVGELVSDMVEEARPAAERGGIRLSAEVDRALQAVPLDRRKFEKIALNLLSNALKFTPQGGRVTVALRARDDALELAVEDTGPGIPADKRHLLFQRFQQIDASATRKHEGTGIGLSLAKELAELMEGTVGVESEPGAGARFVVRLPRAADRLAAPRPERSPEPPSAPGSAARAADLAPPAPHVPRGGRAGRGAGDAAARVLVVEDNPDMQSYLDNLLSAEHDVALAANGLEALESIRAARPDVIVSDVMMPEMDGFELVRRLKQDPELRDVPVLLLTARAGRAEAVGGLDVGADDYLSKPFDPLELRARVRAAARLHRVYLELAAKRHELEATLKQLAETQEELVQAGKMAAIGTLVAGLSHEMNNPVSAILMNAQHLLRRHQKGHGLPDEAAILRALAAIERQALRCSELVRALLEYARGRPIGREPCDVRAALRRALDLSWPRARERRVHIEAHGAAAALPAVLANPAQLDSALLNVIGNALDASPPGRSILVGARPLPRGEVKGVEIDVRDAGCGIRAEDLSRIFEPFFTTKPPGQGTGLGLALTQRFINESSGSIRVESEPGKGTTVRMWLPALPADAAC
>CP012670.1|AUX20367.1|1096549_1096771_-|hypothetical-protein
MKHQVISPRAVATLGPEQRLSMAEARHRELDSRLRQLGRRAFLTPGEQMEAAQLKKHKLAAKDEIESLRRRLA
>CP012670.1|AUX20368.1|1097136_1098276_+|hypothetical-protein
MSARILAFAVVLGGCTSRAPVPARAPAPAPARAPVELAPIVVSPYSDAELAAEFERARALLLADKVREAAPLFDRLVRLAPDGEVAPPSLFNAGLAYEALGDRPLAAERYGEVARRFPDHALARGALFRLARVTAALERWPELVEVARRLLRLGDLRVLEAIEARGALALGLVEQDLVDEAARQVTLARDLIEAHRLGEAGKPPIELAQVSFALGEVRRRRSEAITFVPAPASFADALERRCQGLLDAQSAYTEAMRSLDAHWSAMAGYRIGQLYKELHRDVMQVPPPPSADTPRKRQLFEGAMRLRYRVLLEKGQKMLAGTVRLGERTGEAPAWAHRARDALREIELALAEEQAALARLPFTEAELSAALDALKAARP
>CP012670.1|AUX20369.1|1098301_1099456_-|hypothetical-protein
MSFRRHFVFAPFLIAAGLAPISGGCAATGDRGPAGTSTPDDAGSGGGAGVSGGGFGSGDITGGASLAEGGLGAAGAGEGELSDDASCAQTSAQATLLPLDMLILLDRSGSMLGSKWSGVTSAISRFVNDTASAGMNVGLTYFPRGAAGQNDCEHTSYEALAVPFGELPTNTSALTASIQDTSPSGGTPMRPALQGVLANATAYQDANPSHKVIVVLATDGDPSGCASNTVANTAELAQRALNYNGVQTYVIAVEGSTVSNLDQIAAAGGTTRAFDVTADVSAFSAKMAEIRASALPCELLVPEPPLGAILDQSRVAVRLASGSSGELEIPRADDQADCGAGPGWYYDNEALPKKIILCPASCTTVQATAHAKLDVLFGCEPKLN
>CP012670.1|AUX20370.1|1099834_1101397_+|uncharacterized-protein
MTSWIPWVLSAVALTDLGCSAASSAGSAGAGAAGGSGGAPASAVSSGGGGGSGGAPPCEIDCSLVPTSQCMAAVCNEATRECELVPSAGGEPCDDRDACTVGETCEDGVCQGGAQEDCGVTPDACHVVTCVDAGGAPRCGLEPREDGTPCVTDDRCVLNATCQGGVCAGTQRDCFFFQVPDSCHVGVCNPATGACEAVPGNEGQPCADSGDLCMVGKTCQGGRCEGGAPRDCSALSVGCDEGVCDPGSGNCYAEPIAPGGACLSGTDECNRGVCDEQGACISIPTPGEWCPSETVGCTRGVCSDDGVCTPRPVPDGGACVDSDWCTVGETCLAGVCQGGAAEAPTVYFRDTFESNAAGWELGPTWEIGQATSSSGHTYGHADPASDHTATSDNGVAGVVIGGNAPVSAHPYYYLTSPVVDAEFDGGVYLTYWRFLNSDEAPHMTNRVEVFDGARWVVLFESGSYPGVRDAAWKKVSHDLTPYKNASLRVRFGYAIGRDTFVDSVSSWNLDDVEIANAACP
>CP012670.1|AUX20371.1|1101431_1102133_-|thymidylate-kinase
MTRSSAEDLSAPSSRPAAGSGRGVFVVFEGIDGAGTSTQAERYAAHLRAARRLVHVTREPSGGPVGALLRLMLTHRVSLPGARQAEVMALLFSADRLDHLGAEVEPLLRDGYVVISDRYDLSSLAYQSTTAADGAGDRGEILGWIRELNRHARRPDVTVVIDVAPELAEQRRRGRGGAEELFEQTELQARLAEAYRRAEELVPGDRVIHIDGGGEVEEVSRAIIAALGPIVER
>CP012670.1|AUX20372.1|1102129_1103023_-|pantoate--beta-alanine-ligase
MEFWRQPDELRLSCERARQAGRRVGLVPTMGALHAGHLALIAEARRRADFVAVSVFVNPTQFGAGEDLARYPRTLDRDLAACAEAGASGVFAPEAAAMYPPGEETRVRVGATAAPLCGVHRPAHFEGVATVVTKLFALTGPCVAVFGRKDYQQLQVIRRLAADLFLPVEVVGATTVREPDGLAMSSRNAYLSPEQRSAARAIPLALAEACRAFARGERRAAAILGPARARLAVVASSIDYVDLADPGSLAIWSDEVEIGDRALLAVAIRLGAARLIDNVVLGEDAPPIAGAAEEAPR
>CP012670.1|AUX20373.1|1103066_1105460_+|polyphosphate-kinase
MVDQPSTSDGVLATGHGNDAEPAHASRPGAGSSEPAGPRSGASVAPASGPASIPPASGPASIPPAPAPLPAEGDPSHYLNRELSWLEFNARVLAEASSPEVPLFERLKFLGIFFSNLDEFFMVRVAGLQAQTQRTIAEVPPDGLTPHEQLVAISGRVHALVDEAYRLWGADLIPALQRAGIVIVRPDELEPAELSALDERFRTEIFPILTPLAIDPGHPFPHLRNKMINLGIMFSREHEAQEPGFAVIQVPPMLSRLMRVRVDGAARAFVLLEDVIARHVKDFFPSGRLRGTYPFRVTRNWDLEIDEEEGEDLLETIQAELRRRDRGNAVRVEIGVGEGGVGASVQRLCRALNVDSSLAVYRVSGPLHIADLMGIVADDERREYRDEPFSPQVPPVFRDVEDIFAVVREQDVLLHHPYESFDPVAEFVSRAADDPNVLAIKQTLYRTGGDSPILKALARAAESGKQVTAIVELKARFDEASNIQWARTLERSGVQVIYGLLGLKTHAKALLVVRREKDRLRRYVHLSTGNYNPQTARIYTDIGLFTVNREIGEDMTSFFNLLTGYSAPPKWNRLLVAPLGLHEAVLGFIAREAAHARAGRKAEIVAQMNALVDVDVIDALYAASQAGVDIKLAVRGICCLRPGIPGLSERIQVRAVIDRFLEHKRLFRFANGGNEEIYMSSADWMPRNFHRRVEVMIPILDSSVRARVNDILNTTISDTVKTWELASDGGYHKLALSPGAPAVRSQQRFIELARERVKLSDPLARGGGRFHILRVPVSPSDGESRHRKTAKKKKGLP
>CP012670.1|AUX20374.1|1105594_1106422_-|hypothetical-protein
MLRLIALSGAARTPRSSPPSGRRAGALSLGVALAGLLAATTAVAQPAPPQQPSAQPPATPPAVAPQPPAGAAAPQPAPHGPVAPPYPAPPPGPGVAPPAAPGYPPPPGYPGGYAPYGQGGYAPYGQGGYAPHGGAYYPPPPGYYPYPPAPELPPASPPVSMQRRSPSMMVGGIALAAGGAIGFFAGTALLASASQRYEIYCDYGGYTSVCDRLTDEPRQVAGVLVSVAGGIMLAVGIPLWVIGGKKVPVKSEETRAESQATLSLGPGSAALTVRF
>CP012670.1|AUX20375.1|1106453_1107335_-|uncharacterized-protein
MDTADPAPSSRSHPDGGATGTTPTAERAAGARPDRAASRGEAALAAPARTGAARGAQPARSRGGARASRNGRPRRDRALVLFLGLVALAAVIVYAAQSPPSRERAEAEPESAAPASQQRAAPEPTSATPAAPPGPPVDVSPPTIVTAEAAADAPASAAATQRPAASAAARPAASAAATQRPAASAAATQRPAASAAATQRPAASAAATQRPAASAAATQRPAASAAVTQRPAASAAATQRAAAAPPATPATAEKPAAAPPEAAPPSDLTNPPATKPAAPTPEPAAKPAETPYE
>CP012670.1|AUX20376.1|1107568_1108027_+|30S-ribosomal-protein-S12
MHLLLGILRVPIPQGEICVTMPTISQLIRQGREAARYKTASPALKSCPQRRGVCVRVYTTTPKKPNSALRKVCRVRLSNQMEVTSYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHVVRGTLDASGAAGPSSTNKANRNRKRSKYGVKRPKA

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Crispr_ID: CP012670_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_12

1567881-1568010

Orphan

Consensus_repeat	Method
CCCCCACGCCGCCCCACGACACGAACACCCTCTCCGGGGGCCTACGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_12

>merge|CP012670|12|1567881-1568010|CRISPRCasFinder
CCCCCACGCCGCCCCACGACACGAACACCCTCTCCGGGGGCCTACGGTTCGCTTGATTTGAACCCGAGCCAACACGGCCCGTCCCCCCCCGCCGCCCCACGACACGAACACCCTCTCCGGGGGCCTACGG

>CP012670|12|11|1567881-1568010|CRISPRCasFinder
CCCCCACGCCGCCCCACGACACGAACACCCTCTCCGGGGGCCTACGG	TTCGCTTGATTTGAACCCGAGCCAACACGGCCCGTC
CCCCCCCGCCGCCCCACGACACGAACACCCTCTCCGGGGGCCTACGG

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX20739.1\|1581124_1582441_+\|proteinase-IV	unknown	unknown	gnl\|CDD\|381056
CP012670.1\|AUX20740.1\|1582454_1583117_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224931
CP012670.1\|AUX20723.1\|1557324_1557825_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|381085
CP012670.1\|AUX20732.1\|1569456_1570668_+\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
CP012670.1\|AUX20737.1\|1578840_1580286_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX20722.1\|1554748_1556785_-\|ABC-transporter	unknown	unknown	gnl\|CDD\|224055
CP012670.1\|AUX20725.1\|1559609_1560479_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|365866
CP012670.1\|AUX20729.1\|1565055_1565640_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX20724.1\|1557881_1559312_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|225043
CP012670.1\|AUX20728.1\|1564766_1565006_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX20730.1\|1565636_1567790_+\|cation-transporter	unknown	unknown	gnl\|CDD\|319848
CP012670.1\|AUX20726.1\|1560491_1562606_-\|peptidase-M13	unknown	unknown	gnl\|CDD\|341056
CP012670.1\|AUX20736.1\|1575850_1578322_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|226415
CP012670.1\|AUX20734.1\|1572677_1574810_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|223715
CP012670.1\|AUX20721.1\|1552879_1554535_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223651
CP012670.1\|AUX20733.1\|1570840_1571947_+\|prephenate-dehydrogenase	unknown	unknown	gnl\|CDD\|223364
CP012670.1\|AUX20727.1\|1562733_1564206_-\|EvpB-family-type-VI-secretion-protein	unknown	unknown	gnl\|CDD\|274538
CP012670.1\|AUX20738.1\|1580427_1580898_-\|gluconate-kinase	unknown	unknown	gnl\|CDD\|225804
CP012670.1\|AUX20735.1\|1575288_1575690_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240430
CP012670.1\|AUX20731.1\|1568077_1568650_-\|cytochrome-c-precursor	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX20739.1\|1581124_1582441_+\|proteinase-IV	gnl\|CDD\|381056	cd19590, serpin_thermopin-like, serpin thermopin and similar proteins. Thermopin, the serpin from Thermobifida fusca, functions as an irreversible proteinase inhibitor with resistance to polymerization at high temperatures. The crystal structure of the cleaved thermopin was found to adopt the canonical serpin fold, supporting its inclusion as a classical inhibitory member of the serpin superfamily. A detailed structural comparison revealed unique features, including charge-stabilizing interactions, a deleted element of secondary structure (the G helix), and a C-terminal "tail" that interacts with the top of the A beta sheet and plays an important role in the folding/unfolding of the molecule. These unique features provide structural and biophysical evidence as to how this unusual serpin member has adapted to remain functional in an extreme environment. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.	0
CP012670.1\|AUX20740.1\|1582454_1583117_-\|hypothetical-protein	gnl\|CDD\|224931	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones].	1.65913e-16
CP012670.1\|AUX20723.1\|1557324_1557825_+\|uncharacterized-protein	gnl\|CDD\|381085	cd00156, REC, phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs). Two-component systems (TCSs) involving a sensor and a response regulator are used by bacteria to adapt to changing environments. Processes regulated by two-component systems in bacteria include sporulation, pathogenicity, virulence, chemotaxis, and membrane transport. Response regulators (RRs) share the common phosphoacceptor REC domain and different effector/output domains such as DNA, RNA, ligand-binding, protein-binding, or enzymatic domains. Response regulators regulate transcription, post-transcription or post-translation, or have functions such as methylesterases, adenylate or diguanylate cyclase, c-di-GMP-specific phosphodiesterases, histidine kinases, serine/threonine protein kinases, and protein phosphatases, depending on their output domains. The function of some output domains are still unknown. TCSs are found in all three domains of life - bacteria, archaea, and eukaryotes, however, the presence and abundance of particular RRs vary between the lineages. Archaea encode very few RRs with DNA-binding output domains; most are stand-alone REC domains. Among eukaryotes, TCSs are found primarily in protozoa, fungi, algae, and green plants. REC domains function as phosphorylation-mediated switches within RRs, but some also transfer phosphoryl groups in multistep phosphorelays.	1.81731e-23
CP012670.1\|AUX20732.1\|1569456_1570668_+\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.86045e-81
CP012670.1\|AUX20722.1\|1554748_1556785_-\|ABC-transporter	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	4.01923e-142
CP012670.1\|AUX20725.1\|1559609_1560479_+\|uncharacterized-protein	gnl\|CDD\|365866	pfam00089, Trypsin, Trypsin.	6.79322e-12
CP012670.1\|AUX20724.1\|1557881_1559312_+\|oxidoreductase	gnl\|CDD\|225043	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism].	1.67169e-86
CP012670.1\|AUX20735.1\|1575288_1575690_+\|hypothetical-protein	gnl\|CDD\|240430	PTZ00473, PTZ00473, Plasmodium Vir superfamily; Provisional.	9.14055e-06
CP012670.1\|AUX20730.1\|1565636_1567790_+\|cation-transporter	gnl\|CDD\|319848	cd07550, P-type_ATPase_HM, P-type heavy metal-transporting ATPase; uncharacterized subfamily. Uncharacterized subfamily of the heavy metal-transporting ATPases (Type IB ATPases) which transport heavy metal ions (Cu(+), Cu(2+), Zn(2+), Cd(2+), Co(2+), etc.) across biological membranes. The characteristic N-terminal heavy metal associated (HMA) domain of this group is essential for the binding of metal ions. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
CP012670.1\|AUX20726.1\|1560491_1562606_-\|peptidase-M13	gnl\|CDD\|341056	cd08662, M13, Peptidase family M13 includes neprilysin and endothelin-converting enzyme I. The M13 family of metallopeptidases includes neprilysin (neutral endopeptidase, NEP, enkephalinase, CD10, CALLA, EC 3.4.24.11), endothelin-converting enzyme I (ECE-1, EC 3.4.24.71), erythrocyte surface antigen KELL (ECE-3), phosphate-regulating gene on the X chromosome (PHEX), soluble secreted endopeptidase (SEP), and damage-induced neuronal endopeptidase (DINE)/X-converting enzyme (XCE). Proteins in this family fulfill a broad range of physiological roles due to the greater variation in the active site's S2' subsite allowing substrate specificity. NEP is expressed in a variety of tissues including kidney and brain, and is involved in many physiological and pathological processes, including blood pressure and inflammatory response. It degrades a wide array of substrates such as substance P, enkephalins, cholecystokinin, neurotensin and somatostatin. It is an important enzyme in the regulation of amyloid-beta (Abeta) protein that forms amyloid plaques that are associated with Alzeimers disease (AD). ECE-1 catalyzes the final rate-limiting step in the biosynthesis of endothelins via post-translational conversion of the biologically inactive big endothelins. Like NEP, it also hydrolyzes bradykinin, substance P, neurotensin, and Abeta. Endothelin-1 overproduction has been implicated in various diseases including stroke, asthma, hypertension, and cardiac and renal failure. Kell is a homolog of NEP and constitutes a major antigen on human erythrocytes; it preferentially cleaves big endothelin-3 to produce bioactive endothelin-3, but is also known to cleave substance P and neurokinin A. PHEX forms a complex interaction with fibroblast growth factor 23 (FGF23) and matrix extracellular phosphoglycoprotein, causing bone mineralization. A loss-of-function mutation in PHEX disrupts this interaction leading to hypophosphatemic rickets; X-linked hypophosphatemic (XLH) rickets is the most common form of metabolic rickets. ECEL1 is a brain metalloprotease which plays a critical role in the nervous regulation of the respiratory system, while DINE is abundantly expressed in the hypothalamus and its expression responds to nerve injury. A majority of these M13 proteases are prime therapeutic targets for selective inhibition.	0
CP012670.1\|AUX20736.1\|1575850_1578322_-\|uncharacterized-protein	gnl\|CDD\|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	2.88447e-33
CP012670.1\|AUX20734.1\|1572677_1574810_+\|histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.09689e-51
CP012670.1\|AUX20721.1\|1552879_1554535_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|223651	COG0578, GlpA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion].	3.16616e-85
CP012670.1\|AUX20733.1\|1570840_1571947_+\|prephenate-dehydrogenase	gnl\|CDD\|223364	COG0287, TyrA, Prephenate dehydrogenase [Amino acid transport and metabolism].	7.50377e-32
CP012670.1\|AUX20738.1\|1580427_1580898_-\|gluconate-kinase	gnl\|CDD\|225804	COG3265, GntK, Gluconate kinase [Carbohydrate transport and metabolism].	2.05227e-62
CP012670.1\|AUX20727.1\|1562733_1564206_-\|EvpB-family-type-VI-secretion-protein	gnl\|CDD\|274538	TIGR03355, VI_chp_2, type VI secretion protein, EvpB/VC_A0108 family. Work by Mougous, et al. (2006), describes IAHP-related loci as a type VI secretion system (). This protein family is associated with type VI secretion loci, although not treated explicitly by Mougous, et al. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0

>CP012670.1|AUX20730.1|1565636_1567790_+|cation-transporter
MTAALPSSEAGPVSVVHAIPGRVRLRLARLRRDAAFGPQLEAGLAAVPGVVSVRVAEAASSVVVEHDPRQADVAAIARAAQVVAATPAPRGALRLARRAREARRASALARGPLYLSSAGMVLSLGGVVSPLLAYPFIFATSVPILRRAWDAVVRRRELNVDLLDSLAIASAVATGDAVNAAGIIWLVTLGDHIRDLTQARARRAIRGLLGYQLDLAWVVRGDAKVQIPVTELAVGDVLVVYTGSVIPVDGTVTDGEGLVDQQTLTGESMPVLKGPGDRCFAATVLRDGKLYIRAERVGGDTTAASTARLIENAPALETRAQNYAEVVANRLVPPALACSAVVLAATRDIGRVSAILTIDFGTGPRVSAPTTVLASMNAAARRGILIKGGAHIEKLARVSTVVFDKTGTLTSGVPEVTDFLVHDALSEREAAALAAAVSARQTHPVSQAVLRLAEAWRLPIPEREESRYLVGKGVQARVHGHVVQLGSPRFMEEIGVACRTEAAAREALEGAAKSLLFLAVDGRHVATLACRDAIRAESRATIRSLRERGIDDIVMLTGDSREVARQVAQELGITRFFAEMLPEDKAEITRRLTQEGRTVAVVGDGINDSPALSYADIGISVSAGAEIARETAGVVLVEDDLSKLVEAIDISRSAMRLIHQNFSMILGVNAVAYALSIPGFLNPVMATLMNNGSAVLACVNGLRPLMAAPDGGRERRR
>CP012670.1|AUX20729.1|1565055_1565640_+|hypothetical-protein
MPTDREVFIIHRIPGRVRIGVGALRRDPARAEPIAEMARECPSVVDARVSPWAACLVVEHEPDAPIEAVLDELARIPELACCCGSSIDDLAPPCATPAEPPSPGRTARLVRDAAVRLNVASQAIPPPQIDLTILVPCVLVGSGLLQALMRRAPDAPHWITLIKYGVDAFVLLNHDRLQSLLASPGAPEGGETGR
>CP012670.1|AUX20728.1|1564766_1565006_+|hypothetical-protein
MERIGLGIIIGVGLASLARITRPTAKKALKLGFAAIEAVKGALGEGRERVADLVAEVKDEMAREPEGAGVRARVEPPAG
>CP012670.1|AUX20727.1|1562733_1564206_-|EvpB-family-type-VI-secretion-protein
MQAGQQHDEPGRDSGGSLLAELLAETGLAPADPAYQDVKEGTEAALGRAAHRPDGAALDNALVDLWIAEIDRRLSRQIDEILHHPVFQRLEAAWRGLKFAVDHIDFRENIRVEILSCSKDDLLADFEDSSEVVRSGLYKIVYSSEFGSFGGKPFAAIISHYEFGPVPQDIALLQKCAAVATMAHAPFLAVAGPQFFGLTDYRKVPHLGDVKALFEGPQYIKYNAFRETEDARYVGLLLPRFLLRLPYGAATVPVKAFSYEEDVVGNHAAYCWGAPTYAFATRLAESFARYRWCLHIIGPQSGGTVEGLTLHEYEAMGAIQTKIPTEIMLTERREFELSEEGFIGLTFRKDTDNACFFSANSVQKPKVFAQTEEGRAAEVNYRLGAQLPYIFLVSRLAHYLKVMQREQIGTWKERGDLERELNGWLGQFVADMDVVSPTVRARRPLRKARTTVTEVEGSAGWYRVHLEVRPHLKYMGAYFTLSLMGKLDRE
>CP012670.1|AUX20726.1|1560491_1562606_-|peptidase-M13
MRTKRQPAATLAIPLALSALLGCGPAASPPPLPPAGAALPSPQPAPQGLPVVETTLEAVGLDGAALDRSVSPCDDFYQFACGGWLAKAEIPGDERAWYRSFHEIEKRNKAELRRILEDAASAGGRDPVSQKIGAFYGACMDEPAIEAAGVAPIADLLARAQKVRDPKGLGALITELHRRRIWALFDISSAQDMKDATRVIAMLDQNGLGLPDRDYYLKEDDKSKALRRTYEEHVARMMRLAGAKGAAATAAAAAVMQIETELAKISKTRVERRDPKGLYNKLDRAALAKAAPSFPWDAYFQGIGRPDIKEVNVTSVRFFEGLSRLLTAVKPAAWQSYLAWHVVRSTAPLLPRAFVDESLTLEAALTGKREVEARWKRCVDATDGALGELLAQPFVKTSFPGASKPAAEAMVREVSEAFRRDVRSLDWMDEGTKRRALAKLDAMAYLIGYPDRWRTYDFEIDPRSYAKSALAARAFHTSWDLGKIDEPLDRDEWQMSPPTVNAYYDLQRNHMVFPAGILQPPFYSVKSSVPVNLGGIGMVVGHELTHGYDDQGSQFDEKGNLEDWWSKEVAAAFKEKTGCVEAQYSAREALPGLTLNGKLTLGENIADLGGVKLAFRAYRAMRRGAAEQTIAGGFTEDQQFFLAHGQAWCGKIRDEALRMMVQVDPHAPPRFRVNGPLANLPEFGEAFQCAPGTPMRPAETCAVW
>CP012670.1|AUX20725.1|1559609_1560479_+|uncharacterized-protein
MSCVAAAALALAGCVAGAEGSDGGAEPEGSAAMPIQGGYADGRHDAVVGLRIFADEGRRTCSGTLIAPNLVMTAQHCVAETPRRVACATSRFGELVAPDRVYATPSVLMCERCDTPWFSVREVLRPPGGGGRVCGRDIALLVLRSPVPAERAIPFEPRLDAPPEEGERYAAVGFGLSGALRRDSGVRRYLGPLSIACVGAACGDAERIAPGEWRGETGACKGDSGGPALDAGSRVIGVGSRGRIDCERPIYTGLLPHRAWIVAVGGRAAAIGRYAPPAWVTGDLLQAAP
>CP012670.1|AUX20724.1|1557881_1559312_+|oxidoreductase
MPGSSRPPLFTSLLLAIAAIGCAEASSERSQPEGWDSAVQLRPARDLDASPGVVEVDLTARVEEVEIVPGTRTPVWTYDGGIPGPLLKARVGDRVIVHFRNDLPAPTTIHWHGVRLLAEMDGAPGHSQAETPPGGSFTYDFVVPDAGLFWYHPHVDSAAQQGNGLYGALLVDDPDEPAELGDELVLVLSDIMVHEDGALGDPRAGGNFGTLFGREGDQLLVNGRLNPVIEARGGLRQRWRIVNAAKSRYYQLALAGHRFTRIGGDGGLMERPVETEMLVLTPGERADVLVTPRGAPGATLPVRWVPYDRGYGTTFQRPEVEVFRIRLADAPEAEDAPVPAVARAIPALDPAAAVRRVDLKLTMEEGEGDLVMGINDVPFWEAEPLMATVGDTEVWTVENTFDFDHPFHLHGFFFQVLGEDGRPARPMEWKDTVNVPVGGAARFVVRYDNRPGMWMFHCHILDHADAGMMGMLHLVR
>CP012670.1|AUX20723.1|1557324_1557825_+|uncharacterized-protein
MGTDERRGDGAAAVQRDTSQALDGAEDDAPAAPLPLRPPGLGSVRREPRRPGTIFIVEDDRGVSDALASVLSDEGYDVTVAANGAEALARLRDAPTPALIVLDLMMPVMDGYEFRAEQLRTPAIADVPVVVLTAGTAPRASELGAVDILKKPIDLVLLLDAVGRYV
>CP012670.1|AUX20722.1|1554748_1556785_-|ABC-transporter
MSAFAQRTYQKSPLPRWAGRTSSILQGRIALRLVASSRPAGSERLRFFLRVGAYFKDEWARLGALFALVAVSIVISLLQVWPVAVIVDLISSGPREDDLVHRILLAPLPDSLLGRVIGLAVITLVLRVAQECVGMGRALLNFRIGYGGLMRVRGDLYRKLQALHLGYHRAQPQGDAIYRLNQDAAGFHGILNVAVSVMGSALTLVVMICIMASRSAPLTLLALAVVPPLLLANARFGSVLRRKCTEAKEVESQLTTSVQRSMASIGLVQACGREADEEARFHATLRNSVRAWLRLHQDELRHVLTMGSILGLGIALVLGYGGYLVVEARTSGGSSGMTLGALTAFLGYLGMLYDPLCKLTGAGAAVQGGVAGAQRVFDVLDRDQAVTDGHAAIHLPQQPRTLDIEGVEFEYRAGHPVLRGIDATIRPGEMVAFLGSAGAGKTTLFSLLPRFHNPTRGALRLDGIDIGTIRLSDLRKHVALVLQDSVLLPTTIAENIAYGRPTATDAEIREAAQRAGAAGFIEALPDGYDTQIADGGLNLSAGQRQRIAIARALLTDAPILVLDEPTDGLDAEHERTLGKALRALKGQRTIILLSHRLSTVVDCDQVFVMERGRIVERGAHAELLRRGGVYTRMARWQLLHPDHVAHGGEVAPPTQRSAARRAHPISAEPSRADDAAMS
>CP012670.1|AUX20721.1|1552879_1554535_-|FAD-dependent-oxidoreductase
MLRATNIDSLSRETFDVLVLGAGINGAVSAAALAAKGAKVALIDRGDFAGFTSQESSNLAWGGIKYMESFELWLVRKLCKSRNLLLRSYPSSVREIRFYTAHERGFRHGLFKLFLGTWLYWIIGSFFTRIPRLLSRRVMAREEPLINLDGCDGGIEYSDAYLVDNDARFVWGFVRAALDRGARAANYVESLGARREGDAWVTRARDVLSGRELAIRSRVLVNACGPFVDAHNALTGQRTGHRHIFSKGIHLIVDRLTPSRRVLTFFADDGRLFFVIPMGPRTCIGTTDTRVESPRAEVTPEDRRFVLSNINKRLALPRPLTEADIIAERCGVRPLAVRDGGGGGEDWLQLSRKHAIEIDRAGRHVSIFGGKLTDCINVGEEICAAAEELGVALPRPGERWYGEPGEEVRRAFLERARALDLDALAPPRATEKLSERLWRRYGAQALGMLEEIRRDRRMADALIEGVDDLRCEVAHAARAEMVAKLEDFLRRRTRIALLLRREELARSPGLREACRILFGDEADQRLAEYFEQPGERAPAEGAAPVAAPPVE
>CP012670.1|AUX20731.1|1568077_1568650_-|cytochrome-c-precursor
MSTGPQPDLSSPAAARAPARAARWAARTLLGAALAAMIGCALGAQPEGSPHVSASSPEEAGRYLILVGGCNDCHTPGWDRSSGRLPTSEWLTGNDIGYRGPWGTSYAANLRLSAQRLSEEAWVAMFRAGVGLPPMPWLNYTTMPERDLVAMYRFIRSLGEKGVPTPQPVPPGQEPRTPYILMVPQHPGGG
>CP012670.1|AUX20732.1|1569456_1570668_+|protein-kinase
MNVPVVAGDVIAEKYRIDRVLGSGGTGVVVGASHLVLPQRVAIKLLLDGSSKDVAERLLREARAAMQLRGEHVVRVLDVGQLGSGVPYVVMEQLEGQSLSELLRDRGQLDLPEALDHVMQACVALAEAHAAGIVHRGLEPASLFLARTPGGTSLLKVLDFGVSGPLPGAGEGGGGSPAQARQRPGAALYQAPEQLRSPADADARADLWSLGAILYRLLTGQPPFDASSPTDLAARIAGAEPELPSALRSDIPPEVERVVLGCLEKDPARRPANVAELAIALAPFASEASQGHAERAARILGATLPPRHRASLPTIGLGLKAAPGAALLPPDSVGPSSRALARAAPLDAPARGSARARFGAIVAIASLIALAALVASRSGSSGEPEAERSQEPAAPAARGDAPE
>CP012670.1|AUX20733.1|1570840_1571947_+|prephenate-dehydrogenase
MPHSLPHSGGGSAPPARIGKVAFLGYGRFGAALGSLLQDEGIAVRALDPGADIPEATRAASLPELVDGADLVLVAVPVPAVREAIVSLRPHLAPGQVVADVGSVKTVPARAMAEVLGDARPWVATHPLFGPASLARGERPLRAVVCPNPAHPDAVRRVVALFERIGCQVLEQGPEEHDRVMAFTHALAFFMAKGMMDAGVPAGAPYAPPSFQGIARTIETVRADAGHLFAALHRENPFAGEARRRLIDALTAVDRSLDVAAKDAAPEDLAALAIPDLGALSPELRETRELIDEVDLELVGLLARRTELVQRAARAKATIGAAVRDPVREARLMESRRRAAAELGLDPDGVAEVFEVILRHSRSLQERR
>CP012670.1|AUX20734.1|1572677_1574810_+|histidine-kinase
MRAEVGRVNILVVDDRSEQLLSLGAVLEPLGENIIKAGSGREALRCLLQEEFAVILLDINMPEIDGFETASLIRKRKSTRHTPIIFLTAHTERVYVERSYSLGAVDYIMTPFAPEVLRTKVSVFVDLFKKTQKIKLQAESLRAHAEQLQRLNRAAVTINSARSLDDMVAAITEAARDVAGAHQAMTLVKVERPGEPARTAVSISERYATFQQESPTPIAGRLGAFVYGRNRPLRMTQRELSQHPEWLDDGGQTPPRGYLAVPLTAPDGRNMGTIQLSDRHDGEFSDDDETVLVQLAQLASIAIQNRMYAEAREASRVKDELLATLSHELRSPLSAILGWTHLLRSEPLDERRVAHGLEVIERNVVAQTKLIEDLLDVSRISAGKLRISAAPMALAPVVETALDAIRPAAAARQLALDASLDPSLEVNGDADRILQVASNLLSNALKFTRPGGRVDVSLRRAGARAELAVRDTGEGIAPDFLPFVFECFRQADSSSRRAYGGLGIGLSLVRTIVEAHGGSVTAESPGLQQGSTFVVRLPLLGAERGLPAGPLREARPRARAACSGAARDLGGLRVLLVEDDADARELLQEVLVQHHAEVTAVASVREALAAFGAARPHVLVSDIAMPGEDGYELIRRIRQRPAHAGGDLPALALTAYARKEDQRRALDAGFHMHAAKPIEPAALVAAVASLAARARAGEPSGDRSGARTSR
>CP012670.1|AUX20735.1|1575288_1575690_+|hypothetical-protein
MKASMSILASALLLGATVMIGAGCGDDEEGDTTSTSATTGGGEGGSTGEGGSTGEGGSTGEGGSTGEGGSTGEGGSTGEGGSTGEGGSTGEGGSTGEGGSTGEGGSTGEGGSTGEGGSTGEGGSTGEGGGDGA
>CP012670.1|AUX20736.1|1575850_1578322_-|uncharacterized-protein
MIAKELDAGEGASGVFEARSPAPPADGLGRDDGLAFSRCAEAAERAYLGGQIERAASMLEALGAAARSDLERVRAHELRIAILTAQGRLDEALRIGRSALAMLGENLPDDGPARKAAADAELAAARAALGRRRIKDLLDEPETSDDRTRAALRLLMSLFMPAAMVSPPLCAFIAARQVNLALERGHGGASPFGYMAYAWVVARMFRRYEEAYELGALALDLSERSDQRELSCRLRLLLGAHISVFTKHLLSSLDLFTQAHEDGLRTGDLTYLSHTCVHASLVRFGLGDECEAVRDEVDGFLTVVQRARDELAAAALTSVRRALDVLTGASPARRAPGSAASDEAAHEETISGPGYGAVAFIHHALRQQLCFLFEDPEGALRMGSLAEARMQGGAGDHLATEVVFYTCLAQLSPARPRDRQLTSVSLQSYRDRLAEWAEQCPDNYRHKHLLVRAESARAAGEELAAMKLYDQAIEAARVNGFVRDEALASELCAKFHLASGRERIAHVYMSDAYDGYLRWGATAKLRQLSRRYPHLVAQAALAGHSSRPPSVFPASVPPPASVPPPATMASPATIAPPATIAPPATIAPPATVAPPATVAPPATIAPPATIAPPATVASPALAYPATVALPVHVAPPAHVAPPAHVAPPASVAPPPASMEELSQAPREPRPEPTATLLPIPGRILVLPLAGEMTPARVARALERIVTGAAARRARVVVIDVSGARRVEAGLAIALTQAAAALRPLGAQVVATGICPEAAQALAELGVDLSVLVTRRTLQSGLACALELARGARRCRRRVAARTQPGALSLRAGMSRHRRAQAPR
>CP012670.1|AUX20737.1|1578840_1580286_+|hypothetical-protein
MQSVWRASSALCGVLCWGAGCCSGPADGVMESVPERERAETSRANTEHGVSPRMCRTGSAGLDGVCQGAAVPVGDGERAQPGCQRAPFSRMFPGSGATLRGFAVDRAGNALLAGAFEGGLAFGAARLESAGDADAFVAKVDACGVPLWSRRFGDGAAQGALDVAAAGGHTLVLGDFSGTLDLGGRRLTASPAGGDLFLVKLGPDGSTRWAVQLSAEEGSILSGTALAADGSGGVLLLGRLEGAATIDGARIERRAIGAFVARLDASGRLRWASLPPSGSDSEEIGVEADERGNVLLAAQDARGTATFVTKLDPSGELLWHKRFRGSPEQLEEAYDLAVAPDGSALLSGSGVFGDPALRGGPRTFVARLSPEGDVRWVKGFGEQSPRRITAADERVVLAGDALCGATDESTSCSAWTAELSLSGEERWTQRIGEDVRVAGLKMDPWGSPILAGSFQGTLALGGDPLSSAEGALFLSRLPASP
>CP012670.1|AUX20738.1|1580427_1580898_-|gluconate-kinase
MGVSGAGKTTVGARLARELGWTFVDADDLHPAANIEKMRAGKPLDEQDRTPWIAALSARIAQLLDQGSDAVLACSALKAAHRARLLVDPARMRVVHLTGDPALIAARLSARTDHFMPPGLLPTQLAALEPPEDAVRVDIGRTPGEITAAIRRAIGL
>CP012670.1|AUX20739.1|1581124_1582441_+|proteinase-IV
MGIHPISAFLLPLSLVLAGCVSDSTDPEPQPSPPECRDPDTAGCVVASEKTRILEPSVPDADRKELADGNTTFALELYRRLGAEPGNLFCSPHSVSSALAMTYAGARGETAAQMAGALRFTLPGERLHPAFNALDLALAGRGKGAEGRDGGGFRLHVANAIWGQVGYSFQPSFLDVLAQSYGAGLRVVDFVEAPEAARGIINAWVARRTEDRIRDILPEGAIGPSTRLVLTNAIYFNAAWQFPFKEEQTTPGDFTLAGGSTVSVPMMAGVAQLRYGEGDGYQALEMPYEGGELSMLLVLPSALGELEAGLDRARLDGILDSLGERSVAITLPRFKVESTFDLVPPLSELGMPIAFRGDADFSGISGQGGLSITDVIHKAFVSVDEAGTEAAAATAVVIGETAAPEPATIRFDRPFLFFIRDHATGAILFVGRVANPSA
>CP012670.1|AUX20740.1|1582454_1583117_-|hypothetical-protein
MNGARLYDLVMRLPLAALMLYNALFVSRDIYVHLFEWRGPTGLTYGTTVAALLATEAYLLLVATLTLVRLRPLRKLGGIVPRITALAAGLLPGSLAWLPRVEPTPARQMAGTLLMAAGLTLSLVCLGWLGKSFSVMPEARRLVTGGPYQLVRHPLYLAGTIQAAALVVLYPSLAALLLFTVELILQIMRMRYEERVLRDTFPEYDEYARRTTARLVPGVY

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Crispr_ID: CP012670_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_13

1630911-1631021

Orphan

Consensus_repeat	Method
TGGAACTCGGTCGAGGGCGCCGTCGGAGGAGCCCATCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_13

>merge|CP012670|13|1630911-1631021|CRISPRCasFinder
TGGAACTCGGTCGAGGGCGCCGTCGGAGGAGCCCATCGGTACATGAAGGCGGGGAGGCGGGAAGGGGTGATTTGGAACTCGGTCGAGGGCGCCGTCGGAGGAGCCCATCGG

>CP012670|13|12|1630911-1631021|CRISPRCasFinder
TGGAACTCGGTCGAGGGCGCCGTCGGAGGAGCCCATCGG	TACATGAAGGCGGGGAGGCGGGAAGGGGTGATT
TGGAACTCGGTCGAGGGCGCCGTCGGAGGAGCCCATCGG

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX20775.1\|1631199_1631601_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|273344
CP012670.1\|AUX20770.1\|1625563_1628440_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|227511
CP012670.1\|AUX20776.1\|1632102_1632558_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX20771.1\|1628963_1629374_+\|glyoxalase	unknown	unknown	gnl\|CDD\|319898
CP012670.1\|AUX20777.1\|1632557_1633694_+\|integrase	unknown	unknown	gnl\|CDD\|366234
CP012670.1\|AUX20779.1\|1636747_1637848_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|376573
CP012670.1\|AUX20780.1\|1637927_1638299_-\|transposase	unknown	unknown	gnl\|CDD\|290319
CP012670.1\|AUX20772.1\|1629404_1629863_-\|thioredoxin	unknown	unknown	gnl\|CDD\|182889
CP012670.1\|AUX20783.1\|1638755_1639055_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX20767.1\|1621069_1622107_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX20782.1\|1638542_1638743_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX20778.1\|1633736_1634897_-\|integrase	unknown	unknown	gnl\|CDD\|366234
CP012670.1\|AUX20773.1\|1630008_1630251_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX20784.1\|1640002_1640362_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225511
CP012670.1\|AUX20765.1\|1618996_1620217_+\|transposase	unknown	unknown	gnl\|CDD\|376573
CP012670.1\|AUX20781.1\|1638295_1638730_-\|transposase	unknown	unknown	gnl\|CDD\|379129
CP012670.1\|AUX20774.1\|1630333_1630804_-\|cyclase/dehydrase	unknown	unknown	gnl\|CDD\|176862
CP012670.1\|AUX20768.1\|1622715_1623732_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235562
CP012670.1\|AUX20769.1\|1624293_1625262_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX20766.1\|1620575_1620977_+\|glyoxalase	unknown	unknown	gnl\|CDD\|319923

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX20770.1\|1625563_1628440_-\|uncharacterized-protein	gnl\|CDD\|227511	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton].	8.11508e-21
CP012670.1\|AUX20771.1\|1628963_1629374_+\|glyoxalase	gnl\|CDD\|319898	cd06587, VOC, vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases.	2.18267e-17
CP012670.1\|AUX20777.1\|1632557_1633694_+\|integrase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	2.22145e-26
CP012670.1\|AUX20779.1\|1636747_1637848_+\|uncharacterized-protein	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	2.48027e-05
CP012670.1\|AUX20780.1\|1637927_1638299_-\|transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	4.71708e-07
CP012670.1\|AUX20772.1\|1629404_1629863_-\|thioredoxin	gnl\|CDD\|182889	PRK10996, PRK10996, thioredoxin 2; Provisional.	5.98354e-32
CP012670.1\|AUX20781.1\|1638295_1638730_-\|transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	2.52113e-29
CP012670.1\|AUX20778.1\|1633736_1634897_-\|integrase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	2.8469e-20
CP012670.1\|AUX20775.1\|1631199_1631601_+\|uncharacterized-protein	gnl\|CDD\|273344	TIGR00927, retinal_rod, K+-dependent Na+/Ca+ exchanger. [Transport and binding proteins, Cations and iron carrying compounds].	0.000618295
CP012670.1\|AUX20784.1\|1640002_1640362_+\|hypothetical-protein	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	0.00945942
CP012670.1\|AUX20765.1\|1618996_1620217_+\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	5.55721e-08
CP012670.1\|AUX20774.1\|1630333_1630804_-\|cyclase/dehydrase	gnl\|CDD\|176862	cd07820, SRPBCC_3, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	5.49976e-55
CP012670.1\|AUX20768.1\|1622715_1623732_-\|hypothetical-protein	gnl\|CDD\|235562	PRK05687, fliH, flagellar assembly protein FliH.	0.000314984
CP012670.1\|AUX20766.1\|1620575_1620977_+\|glyoxalase	gnl\|CDD\|319923	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	9.5062e-41

>CP012670.1|AUX20774.1|1630333_1630804_-|cyclase/dehydrase
MLAAMPIFEKRTRIAAPPERVFAFHEQPDALERLTPPWERMRVLERTGGLQVGARAIVETRVGPVPLRWVAEHTRYEPGRLFQDTQRSGPFRRWVHTHRMDPDGAGGCYLTDHVAYELPFGAIGRLGGARFVRRKLERMFDYRHEVTRRACEAPAE
>CP012670.1|AUX20773.1|1630008_1630251_+|uncharacterized-protein
MSEQTEQAKPHVGGEQQEPGAPTRHLEDDETTQGASDVEQIARQQGVSQRGYTADGPHKDRPAQFDPAHPGGRPEGDPRR
>CP012670.1|AUX20772.1|1629404_1629863_-|thioredoxin
MAIYRCGRCGSINRVADERVRDRPRCGRCKAQLDTAGAPQPVDGAALAQAIASSPVPILVDCWATWCGPCRTVAPIVDALGRNHAGKMLVLKLDTDADPAEAGRRRIQGVPTFLLFHRGRELDRRTGVASRADLERWIASHTGQPPARASHP
>CP012670.1|AUX20771.1|1628963_1629374_+|glyoxalase
MFKRIAHVCLNVRDLQRSVDFYGKLGFTIKFRFTRGGAPFGAYLEIADGNFVEMFEDRTLGEVVNTGIAHFCLETEDMDAVMATLKRRGVPFTEKKLGCDNTYQIWLTDPDGNRFEVHQYTPASTQHTGGVIEADW
>CP012670.1|AUX20770.1|1625563_1628440_-|uncharacterized-protein
MRSDRLGDKLAATGEPRKDGSVTSLPAQPNRTDKNRASRRRRRPVSPGAALAVSLVAACTADPGAEDLGELTSIAPAELRVLGPGSVDTGARHTCAIFEGGFVKCWGDNAYGQLGLGDTLDRGVSAATTYDDLPFVNLGTGRTAKAIATGGDHTCALLDDDTVKCWGYNASGQLGLELESYLNIGDQPYEMGDNLPTVDLGTNGLGAPHTAKAIFAGHNATCALLEDDALKCWGSNNYGKLGLGLPYWTTVGSLSSEMGDDLPAVDLGTGLFATRVAIANDHMCALLNTGEVKCWGDNEDGNLGLMSGTPTGSDSHAFDRGDAPGEMGDDLPVVYLGLDRTAKAITAGYNHTCVILDTDEVKCWGGNEAGELGLGDTNERGNDANEMSTLATVDLGSSLTGDHTAKAIAAGGNHTCVVLDDDRIKCWGSNSSGALGYEDGNQRGHTAASMGDGLPYVDVGTDIDSEDPLIPLSIAAGGEHTCVIDSGKRWFKCWGSDQDGRLGFGIPTDDGRRGDDSGEMGNALPYTPAGSQTAQGLSVGRNHACAHLTTGGVKCWGYNASGQLGLEDNVSRGDQPYEMGVYLSNTLIGDVTSVMAGSHFSCALKLLPSSSQTGITCWGANYVGSLGTGNAATLGDNAGEMASLDFIHLGAERTVTSASVGNGHACAVLDDGSVKCWGFNGSGQLGLGDKDNRGDGSGEMGDTLDAIDLGPDRTAKAVSAGGGHTCALLDDDTVKCWGENNHGQLGLGDESDRGDALGEMGASLPTVPLGAGRTAKAISAGYDHTCALLDNNAVKCWGKNGYGQLGLGHTNDMGDGPNDMSMLPTVHLGPGRTAKAVSAGEDHTCALLDDDTIKCWGRNDRGQLGLHDTSPRGIGTGQMGSLLPRVDLGFGRTARAVVTSVTSPVTCALLDTNQIKCWGENLSGGLGSPGCGGATAHCGDDHFEMGDNLKVVDLGFED
>CP012670.1|AUX20769.1|1624293_1625262_-|hypothetical-protein
MPGTSHEVLIVALREQPGLLGALVSALTGVKLPRSLKPSDATLRFVKAAELRLDLVYRGGRRRWVLVELQRSVDPAKRRRWPLAASLLHDQTGVAGDVLVITARRAVARWAERVACVRTRLGTVLQLKPVVLHLGAAESKALLDERHPELALFAAWAMQHRHGPRARAVVERAFELTERLPPALRRAQQRAILSVLSERMLALLREASMNPDKIPETPAARKLRLFLEAQGRKKGRAEGEAKGRAEGRQEALMTLLRARGLSPSRDDEARIRACTDPAKLDRWIARAATATSVREALGTRTPGARARPRAPGRPRPASASRS
>CP012670.1|AUX20768.1|1622715_1623732_-|hypothetical-protein
MPGTPHEVLIVALREQPGLLGALVSTLTGVKLPRSLKPSDATLRFVKPAELRLDLVYRGGQRRWVLVELQRGVDPAKRRRWPLAASLLHDQTGVAGDVLVITARRAVARWAERVACVRTRLGTVLQLKPVVLHLGAAESKALLDERHPELALFAAWAMQHRHGPRARAVVERAFELTERLPPALRRAQQRAILSVLSERMLALLREASMNPDKIPETPAARKLRLFLEAQGRKKGRAEGEAKGRAEGEARGRAEGEARGRAEGRQEALMTLLRARGLSPSRDDEARIRACTDPAKLDRWIARAATATSVREALGTRATGARARPRAPGRPRPASASRS
>CP012670.1|AUX20767.1|1621069_1622107_-|hypothetical-protein
MRLKKKTGRLPSSRRSHSVVPGTPHEVLIVALREQPGLLGALVSTLTGVKLPRSLKPSDATLRFVKPAELRLDLVYRGGQRRWVLVELQRGVDPAKRRRWPLAASLLHDQTGVAGDVLVITARRAVARWAERVACVRTRLGTVLQLKPVVLHLGAAESKALLDERHPELALFAAWAMQHRHGPRARAVVERAFELTERLPPALRRAQQRAILSVLSERMLALLREASMNPDKIPETPAARKLRLFLEAQGRKKGRAEGEAKGEARGRAEGRQEALMTLLRARGLSPSRDDEARIRACTDPAKLDRWIARAATATSVREALGTRTPGARARPRAPGRPRPASASRS
>CP012670.1|AUX20766.1|1620575_1620977_+|glyoxalase
MIIHHTGIGVSDVAGSAAFYDAVLGALGYRRVMRLPEDTGADAVGYGVDYPAFWIDRFHPHGTRNHTAFVAHSRAEVDAFHAAALRSGGTDNGPPGLRDTTQGYPPGYYAAFVLDPDGNNMEALFMESGSPAP
>CP012670.1|AUX20765.1|1618996_1620217_+|transposase
MTTLAKDAHKPAAHGSASAPPKQTIRPKIDQKYIQAFVENLFGDDLHAMRVLSLANGVVGVLQAAVLAIHAIGQAYAKVANIKPKSGVKQVDRLLSNTGIDVFHSLRSWVQFVIGVRKEIVVALDWTDFEKDDHTTLCAYLVTRHGRATPLAWKTVKKSALKGTQKDHEYELIEWLHGAIDETVEVVLLADRGFGDRKLYDFLEFIGWNFVIRFRGCIVVENAVGEARPADAWVPASRRATMLRDVRVTDDRAKVPAIVLVHAPKMKEAWCLATTLSDRKAGDIVKLYGKRFTIEETFRDIKDNHFGMGLSATHIRNAGRRDRLLLLAAIAHALLTLLGAASEEAGLDRYLKVNTVKRRTHSLYRQGLYWYDCLPTLREDWLRPLMIAFDRIVREHAVFREIFGII
>CP012670.1|AUX20775.1|1631199_1631601_+|uncharacterized-protein
MGELPRESGAQRRGGEARRGAWSGGTGAGERGTGAEDGTAGAEERIPWPAGTSPGPEGEHPAEEKAREAAGDRGEVGDESGEAGDESGEVGDESGEVGDESGEVGDESGEAGMRSGEVGDARAEAGMCNRDLG
>CP012670.1|AUX20776.1|1632102_1632558_+|uncharacterized-protein
MPKPSHLRSVDPTPAPAAQGAAPRPSGVAVETLPKPGKRRKFSAAEKLRIVRAAAACTERGDIEALLRREGIYSSLLAAWRKQLALHGSEALAGRKPGRKPKHDAKDRRIAELEKRSARLEEKLALAEKLIDLQKKVSAILGVNLTTDEER
>CP012670.1|AUX20777.1|1632557_1633694_+|integrase
MDVIEELDDPHVPIAQACAALGVSRATLYRQTQPAKPPALTGPAPSPRRLSDPERQAVLDVLHSEEFVDQPPPEVYATLLSRGVYLASIRTMYRLLAASGESGERRAQRGPMKHAKPTLTATAPNQIWTWDITKLRGPLPGVFYCLYVVLDLFSRMTVGWLLAERESAELAEHLFAETVARHDVEPGSLTVHADRGSAMRSEGLAQLLGSLGVVRSFSRPHVSDDNAFSESQFKTLKYQPDYPDRFASLAHARAWCQEFFTWYNDLHQHSGLALFTPADVFYGRVEDVAARRQVALDTAYAAHPERFPNGPPVVRRPPASVVINPLSVDDAASEAAAPTHTATTRAAPESGVTHTAVPQPPRPDAAQSRNALLSAMPS
>CP012670.1|AUX20778.1|1633736_1634897_-|integrase
MPWKECSVVDERLRFIVAAKDGDENFSELCRQFGISRKTGYKWLDRYDEHGPCGLQARAPIAHQHPHRTPDAVVDVILKARKEHPFWGPKKLRAFIAERHPEFEMPAASTIGELLKQHGLIRPRRRRPRAPLPGSPIQPSDRPNALWCADFKGHFALGDRSRCHPLTLTDRYSRYLLKCEALPEPTTKLSRVQFEHAFREFGLPDRIRTDNGPPFASVGIGGLSELSVWWIKLGILPERIEPGRPEQNGQHERMHRTLKEEATKPPCATLLDQQRVFDRFRHEYNDVRPHEALEQKPPARLYVRSARVYPQLLRELEYGEDFIVRKTDDKGRLRRKGKNVVLTKLLANELLGLRPLDDDRWELFFGPVLLGVLDETRDEPRLVRAA
>CP012670.1|AUX20779.1|1636747_1637848_+|uncharacterized-protein
MRQSAGVDACTEGKAKGNLTTTRSEERSHSMRARRQLERVGLSASSIERFLHAAVKVDLHVKTVLSLSLATLGVLHSVSLCIHVIGRGMAWARDGSPKHATKQVDRLLSNNNVSPWLLFDAWVRFVVGPREELLVALDWTEFDVDDHATLALYLITRHGRATPLIWRTVKKSSLAGKRNAYEDEVIERLHEILPKATRVTLLADRGFGDQERYAHLGNLGWDYIIRFRECIIVTDADDTARPAGEWLTSTGRAKMLKNVRVTQDKTAIAAVVLVHDKRMKEPWCLATSRADLTASQVTKLYGRRFCIEETFRDVKNVHFGMGLSATHIGDTARRDRLLLSAPLKTSRRQAADGGRTASLRLVALLQ
>CP012670.1|AUX20780.1|1637927_1638299_-|transposase
MTPANVHDSKMFTPMVDAVPTIARPCGRPRRRPKKLHADKAYDDPALRLACHLRHIVPRIARKGIESSEKLGRYRWVVERTIAWLRRFRRLTVRYERRADIHRAFLQLAVCLICLCHIQAGFC
>CP012670.1|AUX20781.1|1638295_1638730_-|transposase
MGKLLVPDELWERIEPLLPKAEPKPQGGRPRTPDRIALTGILFVLKTGIPWEYLPQELGCSGMTCWRRLRDWQQAGVWGQLHKALLDELGGADKINWERAALDASLVPAKRGVKRLARTPQIAAGRARNITFWSIRMVSRSPSR
>CP012670.1|AUX20782.1|1638542_1638743_+|uncharacterized-protein
MPLQPSSCGRYSQGIPVFSTNKIPVRAIRSGVRGRPPCGFGSAFGNRGSIRSQSSSGTNSLPTRAI
>CP012670.1|AUX20783.1|1638755_1639055_+|uncharacterized-protein
MSQASGRSSEVGGLLLGALIAAFAHVLLTLLGEAGERAGLDRLLKTNTVKHRTLSLYNQGCYWYTAIPNMREERLVQLMTAYGEVLREHAVTREILGTI
>CP012670.1|AUX20784.1|1640002_1640362_+|hypothetical-protein
MPKPGKRRKFSAAEKLRIVREAAACTQRGDIEALLRREGIYSSLLAAWRKQLALHGSEALAERKPGRKPKQDAKDRRIAELEKRSARLEEKLALAEKLIDLQKKVSAILGVNLTTDGER

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Crispr_ID: CP012670_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_16

1641529-1641844

Orphan

Consensus_repeat	Method
CTGAANNGCGGCGGCCCCATTGAAGC	CRT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	PILER-CR
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAA	CRISPRCasFinder

4 spacers

The CRISPR arrays of CP012670_16

>merge|CP012670|16|1641529-1641844|CRT,PILER-CR,CRISPRCasFinder
ATTTTCCGCGGCGGCCCCATTGAAGCTTGTCCACGCCCACGCTGAAGAGCATGTTGCCCGGCCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCAGTCTCTTGCGAGTGCCATGTCCGATGCGTCCTTTCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAACGACGACGGCACGGCGGGCCCGCGCATCACCCTGAGCTCTCCGCCACTGAAAGGCGGCGGCCCCATTGAAGCGTCCGCAACAGACGGGTGGTGTGCTCCACGCCCTCCAGACTCTCCGTTGCCGAACTGCGCCGGCTCCATCGAAGC

>CP012670|16|8|1641529-1641844|CRT
ATTTTCCGCGGCGGCCCCATTGAAGC	TTGTCCACGCCCACGCTGAAGAGCATGTTGCCCGGCCTCTCCGCCG
CTGAAAGGCGGCGGCCCCATTGAAGC	CAGTCTCTTGCGAGTGCCATGTCCGATGCGTCCTTTCTCTCCGCCG
CTGAAAGGCGGCGGCCCCATTGAAAC	GACGACGGCACGGCGGGCCCGCGCATCACCCTGAGCTCTCCGCCA
CTGAAAGGCGGCGGCCCCATTGAAGC	GTCCGCAACAGACGGGTGGTGTGCTCCACGCCCTCCAGACTCTCCGTTG
CCGAACTGCGCCGGCTCCATCGAAGC

>CP012670|16|8|1641591-1641769|PILER-CR
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CAGTCTCTTGCGAGTGCCATGTCCGATGCGTCCTTT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAAC	GACGACGGCACGGCGGGCCCGCGCATCACCCTGAG
CTCTCCGCCACTGAAAGGCGGCGGCCCCATTGAAGC

>CP012670|16|15|1641591-1641842|CRISPRCasFinder
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAA	GCCAGTCTCTTGCGAGTGCCATGTCCGATGCGTCCTTT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAA	ACGACGACGGCACGGCGGGCCCGCGCATCACCCTGAG
CTCTCCGCCACTGAAAGGCGGCGGCCCCATTGAA	GCGTCCGCAACAGACGGGTGGTGTGCTCCACGCCCTCCAGA
CTCTCCGTTGCCGAACTGCGCCGGCTCCATCGAA

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX20787.1\|1642227_1643952_-\|peptidase-M16	unknown	unknown	gnl\|CDD\|223685
CP012670.1\|AUX20779.1\|1636747_1637848_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|376573
CP012670.1\|AUX20776.1\|1632102_1632558_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX20793.1\|1652993_1654625_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377886
CP012670.1\|AUX20777.1\|1632557_1633694_+\|integrase	unknown	unknown	gnl\|CDD\|366234
CP012670.1\|AUX20791.1\|1648981_1651309_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368963
CP012670.1\|AUX20781.1\|1638295_1638730_-\|transposase	unknown	unknown	gnl\|CDD\|379129
CP012670.1\|AUX20780.1\|1637927_1638299_-\|transposase	unknown	unknown	gnl\|CDD\|290319
CP012670.1\|AUX20783.1\|1638755_1639055_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX20796.1\|1656668_1657634_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
CP012670.1\|AUX20782.1\|1638542_1638743_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX20778.1\|1633736_1634897_-\|integrase	unknown	unknown	gnl\|CDD\|366234
CP012670.1\|AUX20794.1\|1654745_1655648_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379155
CP012670.1\|AUX20784.1\|1640002_1640362_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225511
CP012670.1\|AUX20788.1\|1643955_1645560_-\|peptidase-M16	unknown	unknown	gnl\|CDD\|223685
CP012670.1\|AUX20785.1\|1640361_1641495_+\|integrase	unknown	unknown	gnl\|CDD\|366234
CP012670.1\|AUX20795.1\|1655651_1656659_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235906
CP012670.1\|AUX20790.1\|1648155_1648941_+\|short-chain-dehydrogenase	unknown	unknown	gnl\|CDD\|212491
CP012670.1\|AUX20792.1\|1651360_1652941_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377875
CP012670.1\|AUX20789.1\|1645656_1648050_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366506

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX20787.1\|1642227_1643952_-\|peptidase-M16	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	1.08427e-72
CP012670.1\|AUX20779.1\|1636747_1637848_+\|uncharacterized-protein	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	2.48027e-05
CP012670.1\|AUX20796.1\|1656668_1657634_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	3.76383e-10
CP012670.1\|AUX20777.1\|1632557_1633694_+\|integrase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	2.22145e-26
CP012670.1\|AUX20791.1\|1648981_1651309_-\|hypothetical-protein	gnl\|CDD\|368963	pfam06537, DHOR, Di-haem oxidoreductase, putative peroxidase. DHOR is a family of di-haem oxidoredictases. It carries the two characteristic Cys-X-Y-Cys-His haem-binding motifs. The C-terminal high-potential site functions as an electron transfer centre, and the N-terminal low-potential site corresponds to the peroxidatic centre. Its probable function is as a peroxidase.	6.29177e-128
CP012670.1\|AUX20790.1\|1648155_1648941_+\|short-chain-dehydrogenase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	6.27663e-57
CP012670.1\|AUX20780.1\|1637927_1638299_-\|transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	4.71708e-07
CP012670.1\|AUX20793.1\|1652993_1654625_-\|hypothetical-protein	gnl\|CDD\|377886	pfam07631, PSD4, Protein of unknown function (DUF1592). A region of similarity shared by several Rhodopirellula baltica cytochrome-like proteins that are predicted to be secreted. These proteins also match pfam07627, pfam07626, and pfam07624.	2.25206e-43
CP012670.1\|AUX20781.1\|1638295_1638730_-\|transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	2.52113e-29
CP012670.1\|AUX20778.1\|1633736_1634897_-\|integrase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	2.8469e-20
CP012670.1\|AUX20794.1\|1654745_1655648_+\|hypothetical-protein	gnl\|CDD\|379155	pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.	1.9406e-14
CP012670.1\|AUX20784.1\|1640002_1640362_+\|hypothetical-protein	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	0.00945942
CP012670.1\|AUX20788.1\|1643955_1645560_-\|peptidase-M16	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	1.06762e-71
CP012670.1\|AUX20785.1\|1640361_1641495_+\|integrase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	1.12396e-25
CP012670.1\|AUX20795.1\|1655651_1656659_-\|hypothetical-protein	gnl\|CDD\|235906	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau.	0.000234038
CP012670.1\|AUX20792.1\|1651360_1652941_-\|hypothetical-protein	gnl\|CDD\|377875	pfam07586, HXXSHH, Protein of unknown function (DUF1552). A family of proteins identified in Rhodopirellula baltica.	1.21359e-55
CP012670.1\|AUX20789.1\|1645656_1648050_-\|hypothetical-protein	gnl\|CDD\|366506	pfam01186, Lysyl_oxidase, Lysyl oxidase.	7.83244e-39

>CP012670.1|AUX20785.1|1640361_1641495_+|integrase
MDVIEQLDDPHVPIAQACEALGVSRATLYRQTRPAPPPAPPRPAPSPRRLSDPERKAVLDVLHSDEFVDQPPPEVYATLLSRGVYLASIRTMYRLLAASGESGERRAQRGPMKHAKPTLTATAPNQIWTWDITKLRGPLPGVFYCLYVVLDLFSRMTVGWLLAERESAELAEQLFAETVARHGVEPGSLTVHADRGSAMRSEGLAQLFGSLGVGRSFSRPHVSDDNAFSEAQFKTLKYQPDYPDRFASLTHAQAWCQEFFGWYNDLHQHSGLALFTPADVFYGRVEDIAARRQVALDAAYAAHPERFPNGPPVVRRPPASVAINPLSVDDAAGEAAAPPHTGTTSDAPEPGATPAAAARPLPLTSQSRNAPLCAIHS
>CP012670.1|AUX20784.1|1640002_1640362_+|hypothetical-protein
MPKPGKRRKFSAAEKLRIVREAAACTQRGDIEALLRREGIYSSLLAAWRKQLALHGSEALAERKPGRKPKQDAKDRRIAELEKRSARLEEKLALAEKLIDLQKKVSAILGVNLTTDGER
>CP012670.1|AUX20783.1|1638755_1639055_+|uncharacterized-protein
MSQASGRSSEVGGLLLGALIAAFAHVLLTLLGEAGERAGLDRLLKTNTVKHRTLSLYNQGCYWYTAIPNMREERLVQLMTAYGEVLREHAVTREILGTI
>CP012670.1|AUX20782.1|1638542_1638743_+|uncharacterized-protein
MPLQPSSCGRYSQGIPVFSTNKIPVRAIRSGVRGRPPCGFGSAFGNRGSIRSQSSSGTNSLPTRAI
>CP012670.1|AUX20781.1|1638295_1638730_-|transposase
MGKLLVPDELWERIEPLLPKAEPKPQGGRPRTPDRIALTGILFVLKTGIPWEYLPQELGCSGMTCWRRLRDWQQAGVWGQLHKALLDELGGADKINWERAALDASLVPAKRGVKRLARTPQIAAGRARNITFWSIRMVSRSPSR
>CP012670.1|AUX20780.1|1637927_1638299_-|transposase
MTPANVHDSKMFTPMVDAVPTIARPCGRPRRRPKKLHADKAYDDPALRLACHLRHIVPRIARKGIESSEKLGRYRWVVERTIAWLRRFRRLTVRYERRADIHRAFLQLAVCLICLCHIQAGFC
>CP012670.1|AUX20779.1|1636747_1637848_+|uncharacterized-protein
MRQSAGVDACTEGKAKGNLTTTRSEERSHSMRARRQLERVGLSASSIERFLHAAVKVDLHVKTVLSLSLATLGVLHSVSLCIHVIGRGMAWARDGSPKHATKQVDRLLSNNNVSPWLLFDAWVRFVVGPREELLVALDWTEFDVDDHATLALYLITRHGRATPLIWRTVKKSSLAGKRNAYEDEVIERLHEILPKATRVTLLADRGFGDQERYAHLGNLGWDYIIRFRECIIVTDADDTARPAGEWLTSTGRAKMLKNVRVTQDKTAIAAVVLVHDKRMKEPWCLATSRADLTASQVTKLYGRRFCIEETFRDVKNVHFGMGLSATHIGDTARRDRLLLSAPLKTSRRQAADGGRTASLRLVALLQ
>CP012670.1|AUX20778.1|1633736_1634897_-|integrase
MPWKECSVVDERLRFIVAAKDGDENFSELCRQFGISRKTGYKWLDRYDEHGPCGLQARAPIAHQHPHRTPDAVVDVILKARKEHPFWGPKKLRAFIAERHPEFEMPAASTIGELLKQHGLIRPRRRRPRAPLPGSPIQPSDRPNALWCADFKGHFALGDRSRCHPLTLTDRYSRYLLKCEALPEPTTKLSRVQFEHAFREFGLPDRIRTDNGPPFASVGIGGLSELSVWWIKLGILPERIEPGRPEQNGQHERMHRTLKEEATKPPCATLLDQQRVFDRFRHEYNDVRPHEALEQKPPARLYVRSARVYPQLLRELEYGEDFIVRKTDDKGRLRRKGKNVVLTKLLANELLGLRPLDDDRWELFFGPVLLGVLDETRDEPRLVRAA
>CP012670.1|AUX20777.1|1632557_1633694_+|integrase
MDVIEELDDPHVPIAQACAALGVSRATLYRQTQPAKPPALTGPAPSPRRLSDPERQAVLDVLHSEEFVDQPPPEVYATLLSRGVYLASIRTMYRLLAASGESGERRAQRGPMKHAKPTLTATAPNQIWTWDITKLRGPLPGVFYCLYVVLDLFSRMTVGWLLAERESAELAEHLFAETVARHDVEPGSLTVHADRGSAMRSEGLAQLLGSLGVVRSFSRPHVSDDNAFSESQFKTLKYQPDYPDRFASLAHARAWCQEFFTWYNDLHQHSGLALFTPADVFYGRVEDVAARRQVALDTAYAAHPERFPNGPPVVRRPPASVVINPLSVDDAASEAAAPTHTATTRAAPESGVTHTAVPQPPRPDAAQSRNALLSAMPS
>CP012670.1|AUX20776.1|1632102_1632558_+|uncharacterized-protein
MPKPSHLRSVDPTPAPAAQGAAPRPSGVAVETLPKPGKRRKFSAAEKLRIVRAAAACTERGDIEALLRREGIYSSLLAAWRKQLALHGSEALAGRKPGRKPKHDAKDRRIAELEKRSARLEEKLALAEKLIDLQKKVSAILGVNLTTDEER
>CP012670.1|AUX20787.1|1642227_1643952_-|peptidase-M16
MRMKRIVTVSLAAAALAACSSNPPPPPAAPAKAPAAPPPVAAPAPEPADAFRKTPPPPGPEVVFVPPKIEEAKLANGIRVLVVERHELPIVAVEVTTVRGADQAAPGVGAFAGAMLAQGTRTRNALQFSDALGKLGASFSSWVGFDGGGVQGQSVTPRFGELLTLLGDAYMNPAFSPAEIARERSRRITRLAEMNDRPASLLSIAQGMTLYPEGHPYSAPLLGTEAALKQVTRAALVKFHAAQFRPELTTIAVAGDITRADAVKEVERVFGAWKGPAGAPPAPAKAEVPAAPPALAAGAPRVVIVDRPGLTQSTVTVTLPGVPRSTEDHDALLVMNTLFGGQFSSRLNLNLREKHAYTYGARSGFEMRHGPGPFSAGGAIVRENTGPAVKEILAEIERIRKEPVTAEELADAKANLIRQLPARFETAGATASTLAGLAIYALPLDEFATRPARLQRITPADVQRVAQKYLVPEQLRVVLVGDAGAVGEQLTALGLGPVTVQKAPGVPAGPPLTGQRGKAAAPAQQAGKAAAPAAPAQQAGKAAAPAGPAQQADKAAAPAAPAQPQAKPPAAKTP
>CP012670.1|AUX20788.1|1643955_1645560_-|peptidase-M16
MRATHPSERRRLRALSCLSSAIVAALGLTLPAYAAPPPAAAPQPGAPAAAAQAAAAPATGSVSVMIPVEKYTLENGLEVVLHEDRRTPVVAVNLWYHVGSKDEPKGKNGFAHLFEHVMFQGSKHVGEDMFFKYLERAGASDRNGTTSTDRTNYFETVPANELALVLWLESDRMGWLLDHANDETFTSQRSVVKNERRQNYENAPYGLVPQFLRAALFPEGHPYHLLTIGTPEDLDAAQMEDVRAFFKTFYVPNNATLVIAGDIDRARTKELVEKYFGPIPKGAAPPVASKPDPGDLATEKRLEIEADVELPRVTMSWVTPPGFAPGDAELDLVSNVLASGKTSRLYKKLVYDLQIAQDVHAGQQSSQLASTFQITATLKKGKSPEQALRLIDAELDRLRKAPPTKDEHERARAKLLSDLVFSMERVTARANAINYYNQLTGDPGYFPKDVARYEGATAADLQKAVVDLLPRDRRVIALVTPKPGAPKAGRLVKQTAAPAPAAKKAAAAPAVDEPAGAKPAIEKPAAGAAAPKGG
>CP012670.1|AUX20789.1|1645656_1648050_-|hypothetical-protein
MKNVAETLWMGSWLVAVAAGGCGTLAGPPSGAGGSGGGGRPGDVLCAGSDLVCPGGARCQIDAEGEPSGCAAACDDARACGDAACCSPGAACLRGRCVSADLALEPLAGAEAVTFAAVHVGADACEALEGCVGGSGRRMLLRFNVALKNVGDVSFTLGAPSESGVFTPNFCEGSYVVPRFFRARLTRGDAVLAEGALDARCIAMRGGRFGCDAQGLAPGEHVAQPGTAVCNALDVTGVPAGRYALAITVNPDRAFAEARYDNNTLVLPVDYPACDGAMCGGACCPAGHACEDGVCKLPDLRPSARRIVDTLRFSYRTFPADACEILERCVGGPGRRHLLEFEGRIENTGPGHLDAGPERDNPLFEYAQCHQHYHFKNFTEYRLLGADGEVVAQGHKQAFCLLDVAPLDPAAPAPPGAPGPGSTGCNFLSAGWADVYEVGTPCQWIDVTDVPEGDYVLRVAVNPIGVIAERSTADNVVEVPVRVPAFAPCVAEPEICGDLVDQDCDGIADNGCARPACASPRTEVCGNGADENCNGIPDDGCAPIRGADRCETPGELTGSMNYAAEITAANTPDVALPCGGEGGEVFFRFTLPSEEVVYLSTLESDLDTALALLQGDGCGGVPLRCARDTCGAARPGANLAARLPAGRYTVVVKAVRPGATGTVRLKLERASCLGEAAGILESSGLLRGDSTGAPIPAASPCGASSPEESYYVPLCPDRPVTLSSCGLSEFPMRLRVAEDACHTQRPRCSTPQSGCADDPDAASVTLETQQPGGSLGAVTVSGRTPVDFGPYRIFVLY
>CP012670.1|AUX20790.1|1648155_1648941_+|short-chain-dehydrogenase
MAFVVVITGASSGIGRSLALAWAKRGASVVLSARGQEALERVAAEVRAAGGEALPVAGDVTVEEHRAALCERALGAYGRLDVLVNNAGRGYYAPTLEIEPEKLEEIYRLNVVAPVRLAQLAIEPLTAAKGTIVMVSSIAGLAVAPRIGPYASSKFALEALSMTLRAELASRGVRVLVVRPGPVATPFHEHAVVIDNDVGYRPPGHKAQSPDEVAGRIVRAVDAGSEVLETSLFVKAASLAVRVAPGPARWFSKRMARRSGF
>CP012670.1|AUX20791.1|1648981_1651309_-|hypothetical-protein
MVERRSRRWVFGGLDIVLGLLATGAAGLGCAGDLSPPGETPPGETPPGETPGGGGGQPGAPCAEASDGPAPPQAFALHCGGCHGAHGEPTGGFPDLFAYGGPLSEFTEQVRKGTDRMPAFDEQELAAGDLEAIYAYFASGAPPAATCDGGEVAPGACSGVSGKISPLFPAATGGKAITTRAADGTITLEAAGRVRGRHEREKEFSPFQPLYFENRSYKFVIEDAIPAGGGTIKFTWLPIANASEDQIINFRCWYTGDGNVFHANHGMDRISSTHWEFVVERNARENREIREGDLLEFEFGVFLDPATVEGRTSYYSDTFRYRVGSGELTPFDAPNEAALSGGDGTIPYIYEEPHLYYEQMALNIQQGSIQRFLEGRRLFHTDFATGEHSEGGNPVFDEHAGKAGPLSNQGACVGCHLHNGRGAPPEPGEAMATSVVRLFGAGASANGAPAVHPSYGRQLQDRAPGGSPGEGTATVAYTEEPGQFPDGTPYVLRRPTFRFDGLSAGPITSYSVRVARQVVGMGLLEAIAEEAVLERADGMDCNGDGISGRPNLIPDPVSGELRLGRFGWKAGKVSVPHQVADALVVDMGVTTRLFPVEECGEEQAGCQGGTGAGPELADEDLDRLSAYMRMLGVPPRRDTADPAVQRGEALFRQAGCASCHVPTMRTGSDHPFVELRDQIIHPFTDLLLHDLGEGLADTSTSDHLAGPSEWRTPPLWGIGLLEAVNGHTQLLHDGRARDVVEAILWHGGEAEAPKRRFMALPREDRDAVVAFLRSL
>CP012670.1|AUX20792.1|1651360_1652941_-|hypothetical-protein
MKRLMTRRNLLRGAGVCLALPWLESLAPRGARAGELGTPKRFILCTFPNGAPHHWWETAPAFGKTLKGADFKLPRVLQHFAPVKSKMLMISRLGNYTWSTEQHPYIEPSHSRLNAALSTCVDADQLGREARQDLGEWVGNGVSVDQLIVQKAGPEQATRIPSLQTGLGVKPGFFDQRSYAYNQAISWKSPREPLKRSVNPRAVFDALVGAGAAQGGAVPGQSDEQARIEAERRAATEKSVIDGVLADANSLMNRVGSDDRKIVQQYLDSLREIEKNATRVQSTMTPPAGLGCSPIGKPGVVPEPPGQAEGLNENDSTEAGQYKHEDHAKVMIDLIVMAIQCDVTRVITHMLDDARSEFEYRCIPEDVRAQVGLAYRRESSLHYHGSQHGPGNLDRATQDGQYKIVQQSNLDFAAINCWLAQKSAQLAQRLDAIPEGDGTVLDHCVMVHMSEMRSHDHDGYDLPIVLLGGDGVFLNDAHVAYGALGSDRQLRDLWFTIMNQYYGLGVSSFGEDRRGEPNALLEEILR
>CP012670.1|AUX20793.1|1652993_1654625_-|hypothetical-protein
MTFRLDRVFASPWLVAGGCLLGISCTGTLGSQGDGSQGDGSKDDPEQGAAVAPDRMPLHHMTASEYNNTVAHLLGTRLRPADGFPAFGAKGFDANVNALSNLSQVLVQGYYDAAKTLAEDAFSNEAQRAAILVCDPAEGAGDGCAREIIERFGLRAFRRPLEAAEVDRYAAQYAHALATLEMSPVEAVQHVVRTLLTSPNFLLRIEVGPDSERSPGALSGHEIASRLSYLLWSSMPDEALFDAAEGDELATEDELRRQVDRMLADPKSAAFFQNFFGQWLGTRTLPSHNADATRFPVWNDEVKGAMLDQVNAYFASFTTGGRPWSEFLTAPHPESRLLEPIYANDPEGVREGFLTLPAFLTLSSRADRTSPTSRAKTILEQFFCVPLGPPANVDIPELGAAGGDEGPIENVRQELEKHRASPDCASCHDVLDPIGLSLEIFDPIGAYRTAYPNGDPIDATGVYEGVAFEDISGLLPVLVEAARQEKCPTEQLFSYAVRRRPSGGDRARIEEITARWGSGTIADLVKEVVTSEAFRLRAKDEAR
>CP012670.1|AUX20794.1|1654745_1655648_+|hypothetical-protein
MVMVLLLGLSGCGADVEIAVGRMNPVSAASGSGGQEGSGGEAGSGGEAGSGGEAGSGGEAGSGGGGGHGTISCDVLPSPIHRYTFDGAGDVVADLIGGADGVILGGASLDGGGGLTLDGEDDYVDLPAGLLAGLGDVTVMVWVVRGRGGAYLRIVDFGLATGGEDPVEGEGGVGTSYLVITPSTGFEVRGVSALVSDSGVRGEVAIHAEPTLEDGEVHQVAVVFDGAAATVALYLDGALLGSEPVGFPLSAIEDVNNWLGRSQFDADPYFGGRYDELRIYREALAGCAVEAAFRAGPDRP
>CP012670.1|AUX20795.1|1655651_1656659_-|hypothetical-protein
MHVSRWARAPSALQALIVAAVLPASALAAPAEPRAVDLRWEAPDGCPPADEVRSEIARLLGASEQHPPIEVEIAVARAGGARLRLDLRIRAPSPGERVIRGDDCASMSRAAALIVAMSIDPDAVARNAAAQPAAQPAPPPAVAAPVAGAPRPPPAAAVRPPAAAERDLEGALWLSAHIEQALVPAVGIGLAAGGGIRSGWLRADGAAGVVPSSSSRIAGMAAGAEFQLWFLEVDACARALERHLSVYVCALGRQHWLLARGREVDEAFARTAPIFAAGLGTLVERRFAGPLRVEGALHAVVPLRRPRFVVENLEGAVYRPPAAGLSARLGLALAF
>CP012670.1|AUX20796.1|1656668_1657634_-|hypothetical-protein
MDELRPGERALLNALRDADEPTDDDRRRMRAAVWARIGLAGAAATAVTASAASAAGAGSAGAGAAGAGAAGAGSAGAASAGAAGATSAAVAKGTAVTLLGAPLKIGLATIVVGLATGAAVYLPASGDPLDAPRAVAAARIADPTPRALRAAAPSSAPSDESAPPAEASAPAEARASAEASAPAEASTPAEASAAPAMGAAPRAPAPRSPAPRSPAPRSPAPAAAAAARPGAEGLDAEIALLRDAQQALQAGQFAQALAKLNEHASRYPRGVLSTEREASRAIALCRSGRAASGRTIAARLLAKSPGSPLATRVRAACGKEE

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Crispr_ID: CP012670_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_15

1639075-1639845

Orphan

Consensus_repeat	Method
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	PILER-CR
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CRISPRCasFinder
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CRT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	PILER-CR

10 spacers

The CRISPR arrays of CP012670_15

>merge|CP012670|15|1639075-1639845|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCATCCCGTTGACTAGAGCCTTTTGGCCCGCTTCCGTCGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCTCGGCCTTGGGTGCCATCCGCCGCAGGCGCCGCTCCAGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCTAGCAAAACAACTCGTCCCGCAGCGCCGCCGCTTCCGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGCGGGGTCAGGCGCCGCCGGCCGCGCGATTCTCAGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCTCGTTCCCGCTCGCGGATCTCTCCGAGCCCGGCGACCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCTCGCCCAGCTCTCCGAGGAAGCCGGCGCGACGGGCGAGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCTCGCCCAGCTCTCCGAGGAAGCCGGCGCGACGGGCGAGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGACGTTCCAGCCATTATCGGGCTCCGAGATGAGGGCCACTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCTTCCTCTGCGCGCTTCCGGATGCGCATGTTGCGCATGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCACCAGGTCGCTGACGTGTGTCGCTGTGATTGAAGAGGCCTCTCCGCCGCTGAAAGGCGGCCCTCTGTGCCAACG

>CP012670|15|6|1639075-1639474|PILER-CR
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ATCCCGTTGACTAGAGCCTTTTGGCCCGCTTCCGTCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTCGGCCTTGGGTGCCATCCGCCGCAGGCGCCGCTCCAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TAGCAAAACAACTCGTCCCGCAGCGCCGCCGCTTCCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GCGGGGTCAGGCGCCGCCGGCCGCGCGATTCTCAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCGTTCCCGCTCGCGGATCTCTCCGAGCCCGGCGAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCTCGCCCAGCTCTCCGAGGAAGCCGGCGCGACGGGCGAGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTCGCCCAGCTCTCCGAGGAAGCCGGCGCGACGGGCGAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GACGTTCCAGCCATTATCGGGCTCCGAGATGAGGGCCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TTCCTCTGCGCGCTTCCGGATGCGCATGTTGCGCATG


>CP012670|15|14|1639075-1639845|CRISPRCasFinder
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ATCCCGTTGACTAGAGCCTTTTGGCCCGCTTCCGTCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTCGGCCTTGGGTGCCATCCGCCGCAGGCGCCGCTCCAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TAGCAAAACAACTCGTCCCGCAGCGCCGCCGCTTCCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GCGGGGTCAGGCGCCGCCGGCCGCGCGATTCTCAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCGTTCCCGCTCGCGGATCTCTCCGAGCCCGGCGAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTCGCCCAGCTCTCCGAGGAAGCCGGCGCGACGGGCGAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTCGCCCAGCTCTCCGAGGAAGCCGGCGCGACGGGCGAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GACGTTCCAGCCATTATCGGGCTCCGAGATGAGGGCCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TTCCTCTGCGCGCTTCCGGATGCGCATGTTGCGCATG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ACCAGGTCGCTGACGTGTGTCGCTGTGATTGAAGAGGC
CTCTCCGCCGCTGAAAGGCGGCCCTCTGTGCCAACG

>CP012670|15|7|1639075-1639845|CRT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ATCCCGTTGACTAGAGCCTTTTGGCCCGCTTCCGTCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTCGGCCTTGGGTGCCATCCGCCGCAGGCGCCGCTCCAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TAGCAAAACAACTCGTCCCGCAGCGCCGCCGCTTCCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GCGGGGTCAGGCGCCGCCGGCCGCGCGATTCTCAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCGTTCCCGCTCGCGGATCTCTCCGAGCCCGGCGAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTCGCCCAGCTCTCCGAGGAAGCCGGCGCGACGGGCGAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTCGCCCAGCTCTCCGAGGAAGCCGGCGCGACGGGCGAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GACGTTCCAGCCATTATCGGGCTCCGAGATGAGGGCCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TTCCTCTGCGCGCTTCCGGATGCGCATGTTGCGCATG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ACCAGGTCGCTGACGTGTGTCGCTGTGATTGAAGAGGC
CTCTCCGCCGCTGAAAGGCGGCCCTCTGTGCCAACG

>CP012670|15|7|1639514-1639771|PILER-CR
	ATCCCGTTGACTAGAGCCTTTTGGCCCGCTTCCGTCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTCGGCCTTGGGTGCCATCCGCCGCAGGCGCCGCTCCAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TAGCAAAACAACTCGTCCCGCAGCGCCGCCGCTTCCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GCGGGGTCAGGCGCCGCCGGCCGCGCGATTCTCAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCGTTCCCGCTCGCGGATCTCTCCGAGCCCGGCGAC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCTCGCCCAGCTCTCCGAGGAAGCCGGCGCGACGGGCGAGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTCGCCCAGCTCTCCGAGGAAGCCGGCGCGACGGGCGAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GACGTTCCAGCCATTATCGGGCTCCGAGATGAGGGCCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TTCCTCTGCGCGCTTCCGGATGCGCATGTTGCGCATG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX20787.1\|1642227_1643952_-\|peptidase-M16	unknown	unknown	gnl\|CDD\|223685
CP012670.1\|AUX20779.1\|1636747_1637848_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|376573
CP012670.1\|AUX20776.1\|1632102_1632558_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX20793.1\|1652993_1654625_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377886
CP012670.1\|AUX20774.1\|1630333_1630804_-\|cyclase/dehydrase	unknown	unknown	gnl\|CDD\|176862
CP012670.1\|AUX20777.1\|1632557_1633694_+\|integrase	unknown	unknown	gnl\|CDD\|366234
CP012670.1\|AUX20791.1\|1648981_1651309_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368963
CP012670.1\|AUX20781.1\|1638295_1638730_-\|transposase	unknown	unknown	gnl\|CDD\|379129
CP012670.1\|AUX20784.1\|1640002_1640362_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225511
CP012670.1\|AUX20783.1\|1638755_1639055_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX20782.1\|1638542_1638743_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX20778.1\|1633736_1634897_-\|integrase	unknown	unknown	gnl\|CDD\|366234
CP012670.1\|AUX20786.1\|1641844_1642129_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX20775.1\|1631199_1631601_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|273344
CP012670.1\|AUX20780.1\|1637927_1638299_-\|transposase	unknown	unknown	gnl\|CDD\|290319
CP012670.1\|AUX20788.1\|1643955_1645560_-\|peptidase-M16	unknown	unknown	gnl\|CDD\|223685
CP012670.1\|AUX20785.1\|1640361_1641495_+\|integrase	unknown	unknown	gnl\|CDD\|366234
CP012670.1\|AUX20790.1\|1648155_1648941_+\|short-chain-dehydrogenase	unknown	unknown	gnl\|CDD\|212491
CP012670.1\|AUX20792.1\|1651360_1652941_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377875
CP012670.1\|AUX20789.1\|1645656_1648050_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366506

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX20787.1\|1642227_1643952_-\|peptidase-M16	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	1.08427e-72
CP012670.1\|AUX20779.1\|1636747_1637848_+\|uncharacterized-protein	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	2.48027e-05
CP012670.1\|AUX20793.1\|1652993_1654625_-\|hypothetical-protein	gnl\|CDD\|377886	pfam07631, PSD4, Protein of unknown function (DUF1592). A region of similarity shared by several Rhodopirellula baltica cytochrome-like proteins that are predicted to be secreted. These proteins also match pfam07627, pfam07626, and pfam07624.	2.25206e-43
CP012670.1\|AUX20774.1\|1630333_1630804_-\|cyclase/dehydrase	gnl\|CDD\|176862	cd07820, SRPBCC_3, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	5.49976e-55
CP012670.1\|AUX20777.1\|1632557_1633694_+\|integrase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	2.22145e-26
CP012670.1\|AUX20791.1\|1648981_1651309_-\|hypothetical-protein	gnl\|CDD\|368963	pfam06537, DHOR, Di-haem oxidoreductase, putative peroxidase. DHOR is a family of di-haem oxidoredictases. It carries the two characteristic Cys-X-Y-Cys-His haem-binding motifs. The C-terminal high-potential site functions as an electron transfer centre, and the N-terminal low-potential site corresponds to the peroxidatic centre. Its probable function is as a peroxidase.	6.29177e-128
CP012670.1\|AUX20781.1\|1638295_1638730_-\|transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	2.52113e-29
CP012670.1\|AUX20784.1\|1640002_1640362_+\|hypothetical-protein	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	0.00945942
CP012670.1\|AUX20790.1\|1648155_1648941_+\|short-chain-dehydrogenase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	6.27663e-57
CP012670.1\|AUX20785.1\|1640361_1641495_+\|integrase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	1.12396e-25
CP012670.1\|AUX20775.1\|1631199_1631601_+\|uncharacterized-protein	gnl\|CDD\|273344	TIGR00927, retinal_rod, K+-dependent Na+/Ca+ exchanger. [Transport and binding proteins, Cations and iron carrying compounds].	0.000618295
CP012670.1\|AUX20780.1\|1637927_1638299_-\|transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	4.71708e-07
CP012670.1\|AUX20788.1\|1643955_1645560_-\|peptidase-M16	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	1.06762e-71
CP012670.1\|AUX20778.1\|1633736_1634897_-\|integrase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	2.8469e-20
CP012670.1\|AUX20792.1\|1651360_1652941_-\|hypothetical-protein	gnl\|CDD\|377875	pfam07586, HXXSHH, Protein of unknown function (DUF1552). A family of proteins identified in Rhodopirellula baltica.	1.21359e-55
CP012670.1\|AUX20789.1\|1645656_1648050_-\|hypothetical-protein	gnl\|CDD\|366506	pfam01186, Lysyl_oxidase, Lysyl oxidase.	7.83244e-39

>CP012670.1|AUX20783.1|1638755_1639055_+|uncharacterized-protein
MSQASGRSSEVGGLLLGALIAAFAHVLLTLLGEAGERAGLDRLLKTNTVKHRTLSLYNQGCYWYTAIPNMREERLVQLMTAYGEVLREHAVTREILGTI
>CP012670.1|AUX20782.1|1638542_1638743_+|uncharacterized-protein
MPLQPSSCGRYSQGIPVFSTNKIPVRAIRSGVRGRPPCGFGSAFGNRGSIRSQSSSGTNSLPTRAI
>CP012670.1|AUX20781.1|1638295_1638730_-|transposase
MGKLLVPDELWERIEPLLPKAEPKPQGGRPRTPDRIALTGILFVLKTGIPWEYLPQELGCSGMTCWRRLRDWQQAGVWGQLHKALLDELGGADKINWERAALDASLVPAKRGVKRLARTPQIAAGRARNITFWSIRMVSRSPSR
>CP012670.1|AUX20780.1|1637927_1638299_-|transposase
MTPANVHDSKMFTPMVDAVPTIARPCGRPRRRPKKLHADKAYDDPALRLACHLRHIVPRIARKGIESSEKLGRYRWVVERTIAWLRRFRRLTVRYERRADIHRAFLQLAVCLICLCHIQAGFC
>CP012670.1|AUX20779.1|1636747_1637848_+|uncharacterized-protein
MRQSAGVDACTEGKAKGNLTTTRSEERSHSMRARRQLERVGLSASSIERFLHAAVKVDLHVKTVLSLSLATLGVLHSVSLCIHVIGRGMAWARDGSPKHATKQVDRLLSNNNVSPWLLFDAWVRFVVGPREELLVALDWTEFDVDDHATLALYLITRHGRATPLIWRTVKKSSLAGKRNAYEDEVIERLHEILPKATRVTLLADRGFGDQERYAHLGNLGWDYIIRFRECIIVTDADDTARPAGEWLTSTGRAKMLKNVRVTQDKTAIAAVVLVHDKRMKEPWCLATSRADLTASQVTKLYGRRFCIEETFRDVKNVHFGMGLSATHIGDTARRDRLLLSAPLKTSRRQAADGGRTASLRLVALLQ
>CP012670.1|AUX20778.1|1633736_1634897_-|integrase
MPWKECSVVDERLRFIVAAKDGDENFSELCRQFGISRKTGYKWLDRYDEHGPCGLQARAPIAHQHPHRTPDAVVDVILKARKEHPFWGPKKLRAFIAERHPEFEMPAASTIGELLKQHGLIRPRRRRPRAPLPGSPIQPSDRPNALWCADFKGHFALGDRSRCHPLTLTDRYSRYLLKCEALPEPTTKLSRVQFEHAFREFGLPDRIRTDNGPPFASVGIGGLSELSVWWIKLGILPERIEPGRPEQNGQHERMHRTLKEEATKPPCATLLDQQRVFDRFRHEYNDVRPHEALEQKPPARLYVRSARVYPQLLRELEYGEDFIVRKTDDKGRLRRKGKNVVLTKLLANELLGLRPLDDDRWELFFGPVLLGVLDETRDEPRLVRAA
>CP012670.1|AUX20777.1|1632557_1633694_+|integrase
MDVIEELDDPHVPIAQACAALGVSRATLYRQTQPAKPPALTGPAPSPRRLSDPERQAVLDVLHSEEFVDQPPPEVYATLLSRGVYLASIRTMYRLLAASGESGERRAQRGPMKHAKPTLTATAPNQIWTWDITKLRGPLPGVFYCLYVVLDLFSRMTVGWLLAERESAELAEHLFAETVARHDVEPGSLTVHADRGSAMRSEGLAQLLGSLGVVRSFSRPHVSDDNAFSESQFKTLKYQPDYPDRFASLAHARAWCQEFFTWYNDLHQHSGLALFTPADVFYGRVEDVAARRQVALDTAYAAHPERFPNGPPVVRRPPASVVINPLSVDDAASEAAAPTHTATTRAAPESGVTHTAVPQPPRPDAAQSRNALLSAMPS
>CP012670.1|AUX20776.1|1632102_1632558_+|uncharacterized-protein
MPKPSHLRSVDPTPAPAAQGAAPRPSGVAVETLPKPGKRRKFSAAEKLRIVRAAAACTERGDIEALLRREGIYSSLLAAWRKQLALHGSEALAGRKPGRKPKHDAKDRRIAELEKRSARLEEKLALAEKLIDLQKKVSAILGVNLTTDEER
>CP012670.1|AUX20775.1|1631199_1631601_+|uncharacterized-protein
MGELPRESGAQRRGGEARRGAWSGGTGAGERGTGAEDGTAGAEERIPWPAGTSPGPEGEHPAEEKAREAAGDRGEVGDESGEAGDESGEVGDESGEVGDESGEVGDESGEAGMRSGEVGDARAEAGMCNRDLG
>CP012670.1|AUX20774.1|1630333_1630804_-|cyclase/dehydrase
MLAAMPIFEKRTRIAAPPERVFAFHEQPDALERLTPPWERMRVLERTGGLQVGARAIVETRVGPVPLRWVAEHTRYEPGRLFQDTQRSGPFRRWVHTHRMDPDGAGGCYLTDHVAYELPFGAIGRLGGARFVRRKLERMFDYRHEVTRRACEAPAE
>CP012670.1|AUX20784.1|1640002_1640362_+|hypothetical-protein
MPKPGKRRKFSAAEKLRIVREAAACTQRGDIEALLRREGIYSSLLAAWRKQLALHGSEALAERKPGRKPKQDAKDRRIAELEKRSARLEEKLALAEKLIDLQKKVSAILGVNLTTDGER
>CP012670.1|AUX20785.1|1640361_1641495_+|integrase
MDVIEQLDDPHVPIAQACEALGVSRATLYRQTRPAPPPAPPRPAPSPRRLSDPERKAVLDVLHSDEFVDQPPPEVYATLLSRGVYLASIRTMYRLLAASGESGERRAQRGPMKHAKPTLTATAPNQIWTWDITKLRGPLPGVFYCLYVVLDLFSRMTVGWLLAERESAELAEQLFAETVARHGVEPGSLTVHADRGSAMRSEGLAQLFGSLGVGRSFSRPHVSDDNAFSEAQFKTLKYQPDYPDRFASLTHAQAWCQEFFGWYNDLHQHSGLALFTPADVFYGRVEDIAARRQVALDAAYAAHPERFPNGPPVVRRPPASVAINPLSVDDAAGEAAAPPHTGTTSDAPEPGATPAAAARPLPLTSQSRNAPLCAIHS
>CP012670.1|AUX20786.1|1641844_1642129_-|uncharacterized-protein
MRLQLVLRTTGDASLRLAAFALAEAATLATMALRIGASAHSWQDVSAGMILGHVTGFVIAALHPIRPIEASHAASTLPRAPEAEPAMFTWTWAF
>CP012670.1|AUX20787.1|1642227_1643952_-|peptidase-M16
MRMKRIVTVSLAAAALAACSSNPPPPPAAPAKAPAAPPPVAAPAPEPADAFRKTPPPPGPEVVFVPPKIEEAKLANGIRVLVVERHELPIVAVEVTTVRGADQAAPGVGAFAGAMLAQGTRTRNALQFSDALGKLGASFSSWVGFDGGGVQGQSVTPRFGELLTLLGDAYMNPAFSPAEIARERSRRITRLAEMNDRPASLLSIAQGMTLYPEGHPYSAPLLGTEAALKQVTRAALVKFHAAQFRPELTTIAVAGDITRADAVKEVERVFGAWKGPAGAPPAPAKAEVPAAPPALAAGAPRVVIVDRPGLTQSTVTVTLPGVPRSTEDHDALLVMNTLFGGQFSSRLNLNLREKHAYTYGARSGFEMRHGPGPFSAGGAIVRENTGPAVKEILAEIERIRKEPVTAEELADAKANLIRQLPARFETAGATASTLAGLAIYALPLDEFATRPARLQRITPADVQRVAQKYLVPEQLRVVLVGDAGAVGEQLTALGLGPVTVQKAPGVPAGPPLTGQRGKAAAPAQQAGKAAAPAAPAQQAGKAAAPAGPAQQADKAAAPAAPAQPQAKPPAAKTP
>CP012670.1|AUX20788.1|1643955_1645560_-|peptidase-M16
MRATHPSERRRLRALSCLSSAIVAALGLTLPAYAAPPPAAAPQPGAPAAAAQAAAAPATGSVSVMIPVEKYTLENGLEVVLHEDRRTPVVAVNLWYHVGSKDEPKGKNGFAHLFEHVMFQGSKHVGEDMFFKYLERAGASDRNGTTSTDRTNYFETVPANELALVLWLESDRMGWLLDHANDETFTSQRSVVKNERRQNYENAPYGLVPQFLRAALFPEGHPYHLLTIGTPEDLDAAQMEDVRAFFKTFYVPNNATLVIAGDIDRARTKELVEKYFGPIPKGAAPPVASKPDPGDLATEKRLEIEADVELPRVTMSWVTPPGFAPGDAELDLVSNVLASGKTSRLYKKLVYDLQIAQDVHAGQQSSQLASTFQITATLKKGKSPEQALRLIDAELDRLRKAPPTKDEHERARAKLLSDLVFSMERVTARANAINYYNQLTGDPGYFPKDVARYEGATAADLQKAVVDLLPRDRRVIALVTPKPGAPKAGRLVKQTAAPAPAAKKAAAAPAVDEPAGAKPAIEKPAAGAAAPKGG
>CP012670.1|AUX20789.1|1645656_1648050_-|hypothetical-protein
MKNVAETLWMGSWLVAVAAGGCGTLAGPPSGAGGSGGGGRPGDVLCAGSDLVCPGGARCQIDAEGEPSGCAAACDDARACGDAACCSPGAACLRGRCVSADLALEPLAGAEAVTFAAVHVGADACEALEGCVGGSGRRMLLRFNVALKNVGDVSFTLGAPSESGVFTPNFCEGSYVVPRFFRARLTRGDAVLAEGALDARCIAMRGGRFGCDAQGLAPGEHVAQPGTAVCNALDVTGVPAGRYALAITVNPDRAFAEARYDNNTLVLPVDYPACDGAMCGGACCPAGHACEDGVCKLPDLRPSARRIVDTLRFSYRTFPADACEILERCVGGPGRRHLLEFEGRIENTGPGHLDAGPERDNPLFEYAQCHQHYHFKNFTEYRLLGADGEVVAQGHKQAFCLLDVAPLDPAAPAPPGAPGPGSTGCNFLSAGWADVYEVGTPCQWIDVTDVPEGDYVLRVAVNPIGVIAERSTADNVVEVPVRVPAFAPCVAEPEICGDLVDQDCDGIADNGCARPACASPRTEVCGNGADENCNGIPDDGCAPIRGADRCETPGELTGSMNYAAEITAANTPDVALPCGGEGGEVFFRFTLPSEEVVYLSTLESDLDTALALLQGDGCGGVPLRCARDTCGAARPGANLAARLPAGRYTVVVKAVRPGATGTVRLKLERASCLGEAAGILESSGLLRGDSTGAPIPAASPCGASSPEESYYVPLCPDRPVTLSSCGLSEFPMRLRVAEDACHTQRPRCSTPQSGCADDPDAASVTLETQQPGGSLGAVTVSGRTPVDFGPYRIFVLY
>CP012670.1|AUX20790.1|1648155_1648941_+|short-chain-dehydrogenase
MAFVVVITGASSGIGRSLALAWAKRGASVVLSARGQEALERVAAEVRAAGGEALPVAGDVTVEEHRAALCERALGAYGRLDVLVNNAGRGYYAPTLEIEPEKLEEIYRLNVVAPVRLAQLAIEPLTAAKGTIVMVSSIAGLAVAPRIGPYASSKFALEALSMTLRAELASRGVRVLVVRPGPVATPFHEHAVVIDNDVGYRPPGHKAQSPDEVAGRIVRAVDAGSEVLETSLFVKAASLAVRVAPGPARWFSKRMARRSGF
>CP012670.1|AUX20791.1|1648981_1651309_-|hypothetical-protein
MVERRSRRWVFGGLDIVLGLLATGAAGLGCAGDLSPPGETPPGETPPGETPGGGGGQPGAPCAEASDGPAPPQAFALHCGGCHGAHGEPTGGFPDLFAYGGPLSEFTEQVRKGTDRMPAFDEQELAAGDLEAIYAYFASGAPPAATCDGGEVAPGACSGVSGKISPLFPAATGGKAITTRAADGTITLEAAGRVRGRHEREKEFSPFQPLYFENRSYKFVIEDAIPAGGGTIKFTWLPIANASEDQIINFRCWYTGDGNVFHANHGMDRISSTHWEFVVERNARENREIREGDLLEFEFGVFLDPATVEGRTSYYSDTFRYRVGSGELTPFDAPNEAALSGGDGTIPYIYEEPHLYYEQMALNIQQGSIQRFLEGRRLFHTDFATGEHSEGGNPVFDEHAGKAGPLSNQGACVGCHLHNGRGAPPEPGEAMATSVVRLFGAGASANGAPAVHPSYGRQLQDRAPGGSPGEGTATVAYTEEPGQFPDGTPYVLRRPTFRFDGLSAGPITSYSVRVARQVVGMGLLEAIAEEAVLERADGMDCNGDGISGRPNLIPDPVSGELRLGRFGWKAGKVSVPHQVADALVVDMGVTTRLFPVEECGEEQAGCQGGTGAGPELADEDLDRLSAYMRMLGVPPRRDTADPAVQRGEALFRQAGCASCHVPTMRTGSDHPFVELRDQIIHPFTDLLLHDLGEGLADTSTSDHLAGPSEWRTPPLWGIGLLEAVNGHTQLLHDGRARDVVEAILWHGGEAEAPKRRFMALPREDRDAVVAFLRSL
>CP012670.1|AUX20792.1|1651360_1652941_-|hypothetical-protein
MKRLMTRRNLLRGAGVCLALPWLESLAPRGARAGELGTPKRFILCTFPNGAPHHWWETAPAFGKTLKGADFKLPRVLQHFAPVKSKMLMISRLGNYTWSTEQHPYIEPSHSRLNAALSTCVDADQLGREARQDLGEWVGNGVSVDQLIVQKAGPEQATRIPSLQTGLGVKPGFFDQRSYAYNQAISWKSPREPLKRSVNPRAVFDALVGAGAAQGGAVPGQSDEQARIEAERRAATEKSVIDGVLADANSLMNRVGSDDRKIVQQYLDSLREIEKNATRVQSTMTPPAGLGCSPIGKPGVVPEPPGQAEGLNENDSTEAGQYKHEDHAKVMIDLIVMAIQCDVTRVITHMLDDARSEFEYRCIPEDVRAQVGLAYRRESSLHYHGSQHGPGNLDRATQDGQYKIVQQSNLDFAAINCWLAQKSAQLAQRLDAIPEGDGTVLDHCVMVHMSEMRSHDHDGYDLPIVLLGGDGVFLNDAHVAYGALGSDRQLRDLWFTIMNQYYGLGVSSFGEDRRGEPNALLEEILR
>CP012670.1|AUX20793.1|1652993_1654625_-|hypothetical-protein
MTFRLDRVFASPWLVAGGCLLGISCTGTLGSQGDGSQGDGSKDDPEQGAAVAPDRMPLHHMTASEYNNTVAHLLGTRLRPADGFPAFGAKGFDANVNALSNLSQVLVQGYYDAAKTLAEDAFSNEAQRAAILVCDPAEGAGDGCAREIIERFGLRAFRRPLEAAEVDRYAAQYAHALATLEMSPVEAVQHVVRTLLTSPNFLLRIEVGPDSERSPGALSGHEIASRLSYLLWSSMPDEALFDAAEGDELATEDELRRQVDRMLADPKSAAFFQNFFGQWLGTRTLPSHNADATRFPVWNDEVKGAMLDQVNAYFASFTTGGRPWSEFLTAPHPESRLLEPIYANDPEGVREGFLTLPAFLTLSSRADRTSPTSRAKTILEQFFCVPLGPPANVDIPELGAAGGDEGPIENVRQELEKHRASPDCASCHDVLDPIGLSLEIFDPIGAYRTAYPNGDPIDATGVYEGVAFEDISGLLPVLVEAARQEKCPTEQLFSYAVRRRPSGGDRARIEEITARWGSGTIADLVKEVVTSEAFRLRAKDEAR

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Crispr_ID: CP012670_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_14

1635328-1636533

Orphan

Consensus_repeat	Method
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	PILER-CR
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CRISPRCasFinder
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CRT

16 spacers

The CRISPR arrays of CP012670_14

>merge|CP012670|14|1635328-1636533|PILER-CR,CRISPRCasFinder,CRT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCTTATTCGTGCTCTCCGCGAACTGGACCTGATCGGGACTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGTCTGGCTGCCGCCGTGGAGCGCGAGGAGCTCCCGCACTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCTAGTCCCCGACACCGACACACACCTCCACGGTGCACGGGTCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCAGGTGCGCGACATGATGGGGAGATGGGCAGCTAACCGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGGGTGCTTCCCCAGATGACGAAGCACCAGCTCCCGCAGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGTGATGTCGTGCAGGCTCATCCCCGCGGGGACCGTGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCTGTGGGCGGGCGCCGGCGCGGGCGTTGTCCCAGCGACTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCCTACTACGATTGAACTTTTCCAGTCAGGTCAGTGCTGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCTCGGGTACGATGTCCGTCGGGTCAAACTCGACCCGTCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCTAGAGATAGGTTCGCTTCATGTTTCCTCGCTTGTGTCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGGCGTGCAGGTGGAGGCCGTCTGGTTGCAGACCGAGCACTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCTCAGATAGCGGGTGACGTCCGCCGCGCCGTGCTACGCCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCTCGGGCAGCCCCGCGCGCCATCGCTCCGGGATGCGCTGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCGCCCTCGGCGCGCGCGGCCTGGTAGAGCAGCGAGCGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCACGATCGCGCACGGCCGTGTCATGCTCCTCTCATCGACTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGCAACCCGTGGATCGGGTGCGCGAAGGTGTCACCGGGCTGCTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC

>CP012670|14|5|1635328-1636533|PILER-CR
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTTATTCGTGCTCTCCGCGAACTGGACCTGATCGGGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTCTGGCTGCCGCCGTGGAGCGCGAGGAGCTCCCGCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TAGTCCCCGACACCGACACACACCTCCACGGTGCACGGGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AGGTGCGCGACATGATGGGGAGATGGGCAGCTAACCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGGTGCTTCCCCAGATGACGAAGCACCAGCTCCCGCAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTGATGTCGTGCAGGCTCATCCCCGCGGGGACCGTG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TGTGGGCGGGCGCCGGCGCGGGCGTTGTCCCAGCGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTACTACGATTGAACTTTTCCAGTCAGGTCAGTGCTG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCGGGTACGATGTCCGTCGGGTCAAACTCGACCCGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TAGAGATAGGTTCGCTTCATGTTTCCTCGCTTGTGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGCGTGCAGGTGGAGGCCGTCTGGTTGCAGACCGAGCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCAGATAGCGGGTGACGTCCGCCGCGCCGTGCTACGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCGGGCAGCCCCGCGCGCCATCGCTCCGGGATGCGCTG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GCCCTCGGCGCGCGCGGCCTGGTAGAGCAGCGAGCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ACGATCGCGCACGGCCGTGTCATGCTCCTCTCATCGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AACCCGTGGATCGGGTGCGCGAAGGTGTCACCGGGCTG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC

>CP012670|14|13|1635328-1636533|CRISPRCasFinder
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTTATTCGTGCTCTCCGCGAACTGGACCTGATCGGGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTCTGGCTGCCGCCGTGGAGCGCGAGGAGCTCCCGCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TAGTCCCCGACACCGACACACACCTCCACGGTGCACGGGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AGGTGCGCGACATGATGGGGAGATGGGCAGCTAACCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGGTGCTTCCCCAGATGACGAAGCACCAGCTCCCGCAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTGATGTCGTGCAGGCTCATCCCCGCGGGGACCGTG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TGTGGGCGGGCGCCGGCGCGGGCGTTGTCCCAGCGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTACTACGATTGAACTTTTCCAGTCAGGTCAGTGCTG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCGGGTACGATGTCCGTCGGGTCAAACTCGACCCGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TAGAGATAGGTTCGCTTCATGTTTCCTCGCTTGTGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGCGTGCAGGTGGAGGCCGTCTGGTTGCAGACCGAGCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCAGATAGCGGGTGACGTCCGCCGCGCCGTGCTACGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCGGGCAGCCCCGCGCGCCATCGCTCCGGGATGCGCTG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GCCCTCGGCGCGCGCGGCCTGGTAGAGCAGCGAGCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ACGATCGCGCACGGCCGTGTCATGCTCCTCTCATCGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AACCCGTGGATCGGGTGCGCGAAGGTGTCACCGGGCTG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC

>CP012670|14|6|1635328-1636533|CRT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTTATTCGTGCTCTCCGCGAACTGGACCTGATCGGGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTCTGGCTGCCGCCGTGGAGCGCGAGGAGCTCCCGCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TAGTCCCCGACACCGACACACACCTCCACGGTGCACGGGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AGGTGCGCGACATGATGGGGAGATGGGCAGCTAACCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGGTGCTTCCCCAGATGACGAAGCACCAGCTCCCGCAG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GTGATGTCGTGCAGGCTCATCCCCGCGGGGACCGTG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TGTGGGCGGGCGCCGGCGCGGGCGTTGTCCCAGCGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	CTACTACGATTGAACTTTTCCAGTCAGGTCAGTGCTG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCGGGTACGATGTCCGTCGGGTCAAACTCGACCCGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TAGAGATAGGTTCGCTTCATGTTTCCTCGCTTGTGT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GGCGTGCAGGTGGAGGCCGTCTGGTTGCAGACCGAGCA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCAGATAGCGGGTGACGTCCGCCGCGCCGTGCTACGC
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	TCGGGCAGCCCCGCGCGCCATCGCTCCGGGATGCGCTG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	GCCCTCGGCGCGCGCGGCCTGGTAGAGCAGCGAGCG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	ACGATCGCGCACGGCCGTGTCATGCTCCTCTCATCGA
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	AACCCGTGGATCGGGTGCGCGAAGGTGTCACCGGGCTG
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX20787.1\|1642227_1643952_-\|peptidase-M16	unknown	unknown	gnl\|CDD\|223685
CP012670.1\|AUX20773.1\|1630008_1630251_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX20776.1\|1632102_1632558_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX20774.1\|1630333_1630804_-\|cyclase/dehydrase	unknown	unknown	gnl\|CDD\|176862
CP012670.1\|AUX20777.1\|1632557_1633694_+\|integrase	unknown	unknown	gnl\|CDD\|366234
CP012670.1\|AUX20770.1\|1625563_1628440_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|227511
CP012670.1\|AUX20780.1\|1637927_1638299_-\|transposase	unknown	unknown	gnl\|CDD\|290319
CP012670.1\|AUX20772.1\|1629404_1629863_-\|thioredoxin	unknown	unknown	gnl\|CDD\|182889
CP012670.1\|AUX20783.1\|1638755_1639055_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX20781.1\|1638295_1638730_-\|transposase	unknown	unknown	gnl\|CDD\|379129
CP012670.1\|AUX20782.1\|1638542_1638743_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX20778.1\|1633736_1634897_-\|integrase	unknown	unknown	gnl\|CDD\|366234
CP012670.1\|AUX20786.1\|1641844_1642129_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX20775.1\|1631199_1631601_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|273344
CP012670.1\|AUX20784.1\|1640002_1640362_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225511
CP012670.1\|AUX20788.1\|1643955_1645560_-\|peptidase-M16	unknown	unknown	gnl\|CDD\|223685
CP012670.1\|AUX20785.1\|1640361_1641495_+\|integrase	unknown	unknown	gnl\|CDD\|366234
CP012670.1\|AUX20779.1\|1636747_1637848_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|376573
CP012670.1\|AUX20771.1\|1628963_1629374_+\|glyoxalase	unknown	unknown	gnl\|CDD\|319898
CP012670.1\|AUX20769.1\|1624293_1625262_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX20787.1\|1642227_1643952_-\|peptidase-M16	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	1.08427e-72
CP012670.1\|AUX20770.1\|1625563_1628440_-\|uncharacterized-protein	gnl\|CDD\|227511	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton].	8.11508e-21
CP012670.1\|AUX20774.1\|1630333_1630804_-\|cyclase/dehydrase	gnl\|CDD\|176862	cd07820, SRPBCC_3, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	5.49976e-55
CP012670.1\|AUX20777.1\|1632557_1633694_+\|integrase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	2.22145e-26
CP012670.1\|AUX20779.1\|1636747_1637848_+\|uncharacterized-protein	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	2.48027e-05
CP012670.1\|AUX20784.1\|1640002_1640362_+\|hypothetical-protein	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	0.00945942
CP012670.1\|AUX20772.1\|1629404_1629863_-\|thioredoxin	gnl\|CDD\|182889	PRK10996, PRK10996, thioredoxin 2; Provisional.	5.98354e-32
CP012670.1\|AUX20781.1\|1638295_1638730_-\|transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	2.52113e-29
CP012670.1\|AUX20778.1\|1633736_1634897_-\|integrase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	2.8469e-20
CP012670.1\|AUX20775.1\|1631199_1631601_+\|uncharacterized-protein	gnl\|CDD\|273344	TIGR00927, retinal_rod, K+-dependent Na+/Ca+ exchanger. [Transport and binding proteins, Cations and iron carrying compounds].	0.000618295
CP012670.1\|AUX20780.1\|1637927_1638299_-\|transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	4.71708e-07
CP012670.1\|AUX20788.1\|1643955_1645560_-\|peptidase-M16	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	1.06762e-71
CP012670.1\|AUX20785.1\|1640361_1641495_+\|integrase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	1.12396e-25
CP012670.1\|AUX20771.1\|1628963_1629374_+\|glyoxalase	gnl\|CDD\|319898	cd06587, VOC, vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases.	2.18267e-17

>CP012670.1|AUX20778.1|1633736_1634897_-|integrase
MPWKECSVVDERLRFIVAAKDGDENFSELCRQFGISRKTGYKWLDRYDEHGPCGLQARAPIAHQHPHRTPDAVVDVILKARKEHPFWGPKKLRAFIAERHPEFEMPAASTIGELLKQHGLIRPRRRRPRAPLPGSPIQPSDRPNALWCADFKGHFALGDRSRCHPLTLTDRYSRYLLKCEALPEPTTKLSRVQFEHAFREFGLPDRIRTDNGPPFASVGIGGLSELSVWWIKLGILPERIEPGRPEQNGQHERMHRTLKEEATKPPCATLLDQQRVFDRFRHEYNDVRPHEALEQKPPARLYVRSARVYPQLLRELEYGEDFIVRKTDDKGRLRRKGKNVVLTKLLANELLGLRPLDDDRWELFFGPVLLGVLDETRDEPRLVRAA
>CP012670.1|AUX20777.1|1632557_1633694_+|integrase
MDVIEELDDPHVPIAQACAALGVSRATLYRQTQPAKPPALTGPAPSPRRLSDPERQAVLDVLHSEEFVDQPPPEVYATLLSRGVYLASIRTMYRLLAASGESGERRAQRGPMKHAKPTLTATAPNQIWTWDITKLRGPLPGVFYCLYVVLDLFSRMTVGWLLAERESAELAEHLFAETVARHDVEPGSLTVHADRGSAMRSEGLAQLLGSLGVVRSFSRPHVSDDNAFSESQFKTLKYQPDYPDRFASLAHARAWCQEFFTWYNDLHQHSGLALFTPADVFYGRVEDVAARRQVALDTAYAAHPERFPNGPPVVRRPPASVVINPLSVDDAASEAAAPTHTATTRAAPESGVTHTAVPQPPRPDAAQSRNALLSAMPS
>CP012670.1|AUX20776.1|1632102_1632558_+|uncharacterized-protein
MPKPSHLRSVDPTPAPAAQGAAPRPSGVAVETLPKPGKRRKFSAAEKLRIVRAAAACTERGDIEALLRREGIYSSLLAAWRKQLALHGSEALAGRKPGRKPKHDAKDRRIAELEKRSARLEEKLALAEKLIDLQKKVSAILGVNLTTDEER
>CP012670.1|AUX20775.1|1631199_1631601_+|uncharacterized-protein
MGELPRESGAQRRGGEARRGAWSGGTGAGERGTGAEDGTAGAEERIPWPAGTSPGPEGEHPAEEKAREAAGDRGEVGDESGEAGDESGEVGDESGEVGDESGEVGDESGEAGMRSGEVGDARAEAGMCNRDLG
>CP012670.1|AUX20774.1|1630333_1630804_-|cyclase/dehydrase
MLAAMPIFEKRTRIAAPPERVFAFHEQPDALERLTPPWERMRVLERTGGLQVGARAIVETRVGPVPLRWVAEHTRYEPGRLFQDTQRSGPFRRWVHTHRMDPDGAGGCYLTDHVAYELPFGAIGRLGGARFVRRKLERMFDYRHEVTRRACEAPAE
>CP012670.1|AUX20773.1|1630008_1630251_+|uncharacterized-protein
MSEQTEQAKPHVGGEQQEPGAPTRHLEDDETTQGASDVEQIARQQGVSQRGYTADGPHKDRPAQFDPAHPGGRPEGDPRR
>CP012670.1|AUX20772.1|1629404_1629863_-|thioredoxin
MAIYRCGRCGSINRVADERVRDRPRCGRCKAQLDTAGAPQPVDGAALAQAIASSPVPILVDCWATWCGPCRTVAPIVDALGRNHAGKMLVLKLDTDADPAEAGRRRIQGVPTFLLFHRGRELDRRTGVASRADLERWIASHTGQPPARASHP
>CP012670.1|AUX20771.1|1628963_1629374_+|glyoxalase
MFKRIAHVCLNVRDLQRSVDFYGKLGFTIKFRFTRGGAPFGAYLEIADGNFVEMFEDRTLGEVVNTGIAHFCLETEDMDAVMATLKRRGVPFTEKKLGCDNTYQIWLTDPDGNRFEVHQYTPASTQHTGGVIEADW
>CP012670.1|AUX20770.1|1625563_1628440_-|uncharacterized-protein
MRSDRLGDKLAATGEPRKDGSVTSLPAQPNRTDKNRASRRRRRPVSPGAALAVSLVAACTADPGAEDLGELTSIAPAELRVLGPGSVDTGARHTCAIFEGGFVKCWGDNAYGQLGLGDTLDRGVSAATTYDDLPFVNLGTGRTAKAIATGGDHTCALLDDDTVKCWGYNASGQLGLELESYLNIGDQPYEMGDNLPTVDLGTNGLGAPHTAKAIFAGHNATCALLEDDALKCWGSNNYGKLGLGLPYWTTVGSLSSEMGDDLPAVDLGTGLFATRVAIANDHMCALLNTGEVKCWGDNEDGNLGLMSGTPTGSDSHAFDRGDAPGEMGDDLPVVYLGLDRTAKAITAGYNHTCVILDTDEVKCWGGNEAGELGLGDTNERGNDANEMSTLATVDLGSSLTGDHTAKAIAAGGNHTCVVLDDDRIKCWGSNSSGALGYEDGNQRGHTAASMGDGLPYVDVGTDIDSEDPLIPLSIAAGGEHTCVIDSGKRWFKCWGSDQDGRLGFGIPTDDGRRGDDSGEMGNALPYTPAGSQTAQGLSVGRNHACAHLTTGGVKCWGYNASGQLGLEDNVSRGDQPYEMGVYLSNTLIGDVTSVMAGSHFSCALKLLPSSSQTGITCWGANYVGSLGTGNAATLGDNAGEMASLDFIHLGAERTVTSASVGNGHACAVLDDGSVKCWGFNGSGQLGLGDKDNRGDGSGEMGDTLDAIDLGPDRTAKAVSAGGGHTCALLDDDTVKCWGENNHGQLGLGDESDRGDALGEMGASLPTVPLGAGRTAKAISAGYDHTCALLDNNAVKCWGKNGYGQLGLGHTNDMGDGPNDMSMLPTVHLGPGRTAKAVSAGEDHTCALLDDDTIKCWGRNDRGQLGLHDTSPRGIGTGQMGSLLPRVDLGFGRTARAVVTSVTSPVTCALLDTNQIKCWGENLSGGLGSPGCGGATAHCGDDHFEMGDNLKVVDLGFED
>CP012670.1|AUX20769.1|1624293_1625262_-|hypothetical-protein
MPGTSHEVLIVALREQPGLLGALVSALTGVKLPRSLKPSDATLRFVKAAELRLDLVYRGGRRRWVLVELQRSVDPAKRRRWPLAASLLHDQTGVAGDVLVITARRAVARWAERVACVRTRLGTVLQLKPVVLHLGAAESKALLDERHPELALFAAWAMQHRHGPRARAVVERAFELTERLPPALRRAQQRAILSVLSERMLALLREASMNPDKIPETPAARKLRLFLEAQGRKKGRAEGEAKGRAEGRQEALMTLLRARGLSPSRDDEARIRACTDPAKLDRWIARAATATSVREALGTRTPGARARPRAPGRPRPASASRS
>CP012670.1|AUX20779.1|1636747_1637848_+|uncharacterized-protein
MRQSAGVDACTEGKAKGNLTTTRSEERSHSMRARRQLERVGLSASSIERFLHAAVKVDLHVKTVLSLSLATLGVLHSVSLCIHVIGRGMAWARDGSPKHATKQVDRLLSNNNVSPWLLFDAWVRFVVGPREELLVALDWTEFDVDDHATLALYLITRHGRATPLIWRTVKKSSLAGKRNAYEDEVIERLHEILPKATRVTLLADRGFGDQERYAHLGNLGWDYIIRFRECIIVTDADDTARPAGEWLTSTGRAKMLKNVRVTQDKTAIAAVVLVHDKRMKEPWCLATSRADLTASQVTKLYGRRFCIEETFRDVKNVHFGMGLSATHIGDTARRDRLLLSAPLKTSRRQAADGGRTASLRLVALLQ
>CP012670.1|AUX20780.1|1637927_1638299_-|transposase
MTPANVHDSKMFTPMVDAVPTIARPCGRPRRRPKKLHADKAYDDPALRLACHLRHIVPRIARKGIESSEKLGRYRWVVERTIAWLRRFRRLTVRYERRADIHRAFLQLAVCLICLCHIQAGFC
>CP012670.1|AUX20781.1|1638295_1638730_-|transposase
MGKLLVPDELWERIEPLLPKAEPKPQGGRPRTPDRIALTGILFVLKTGIPWEYLPQELGCSGMTCWRRLRDWQQAGVWGQLHKALLDELGGADKINWERAALDASLVPAKRGVKRLARTPQIAAGRARNITFWSIRMVSRSPSR
>CP012670.1|AUX20782.1|1638542_1638743_+|uncharacterized-protein
MPLQPSSCGRYSQGIPVFSTNKIPVRAIRSGVRGRPPCGFGSAFGNRGSIRSQSSSGTNSLPTRAI
>CP012670.1|AUX20783.1|1638755_1639055_+|uncharacterized-protein
MSQASGRSSEVGGLLLGALIAAFAHVLLTLLGEAGERAGLDRLLKTNTVKHRTLSLYNQGCYWYTAIPNMREERLVQLMTAYGEVLREHAVTREILGTI
>CP012670.1|AUX20784.1|1640002_1640362_+|hypothetical-protein
MPKPGKRRKFSAAEKLRIVREAAACTQRGDIEALLRREGIYSSLLAAWRKQLALHGSEALAERKPGRKPKQDAKDRRIAELEKRSARLEEKLALAEKLIDLQKKVSAILGVNLTTDGER
>CP012670.1|AUX20785.1|1640361_1641495_+|integrase
MDVIEQLDDPHVPIAQACEALGVSRATLYRQTRPAPPPAPPRPAPSPRRLSDPERKAVLDVLHSDEFVDQPPPEVYATLLSRGVYLASIRTMYRLLAASGESGERRAQRGPMKHAKPTLTATAPNQIWTWDITKLRGPLPGVFYCLYVVLDLFSRMTVGWLLAERESAELAEQLFAETVARHGVEPGSLTVHADRGSAMRSEGLAQLFGSLGVGRSFSRPHVSDDNAFSEAQFKTLKYQPDYPDRFASLTHAQAWCQEFFGWYNDLHQHSGLALFTPADVFYGRVEDIAARRQVALDAAYAAHPERFPNGPPVVRRPPASVAINPLSVDDAAGEAAAPPHTGTTSDAPEPGATPAAAARPLPLTSQSRNAPLCAIHS
>CP012670.1|AUX20786.1|1641844_1642129_-|uncharacterized-protein
MRLQLVLRTTGDASLRLAAFALAEAATLATMALRIGASAHSWQDVSAGMILGHVTGFVIAALHPIRPIEASHAASTLPRAPEAEPAMFTWTWAF
>CP012670.1|AUX20787.1|1642227_1643952_-|peptidase-M16
MRMKRIVTVSLAAAALAACSSNPPPPPAAPAKAPAAPPPVAAPAPEPADAFRKTPPPPGPEVVFVPPKIEEAKLANGIRVLVVERHELPIVAVEVTTVRGADQAAPGVGAFAGAMLAQGTRTRNALQFSDALGKLGASFSSWVGFDGGGVQGQSVTPRFGELLTLLGDAYMNPAFSPAEIARERSRRITRLAEMNDRPASLLSIAQGMTLYPEGHPYSAPLLGTEAALKQVTRAALVKFHAAQFRPELTTIAVAGDITRADAVKEVERVFGAWKGPAGAPPAPAKAEVPAAPPALAAGAPRVVIVDRPGLTQSTVTVTLPGVPRSTEDHDALLVMNTLFGGQFSSRLNLNLREKHAYTYGARSGFEMRHGPGPFSAGGAIVRENTGPAVKEILAEIERIRKEPVTAEELADAKANLIRQLPARFETAGATASTLAGLAIYALPLDEFATRPARLQRITPADVQRVAQKYLVPEQLRVVLVGDAGAVGEQLTALGLGPVTVQKAPGVPAGPPLTGQRGKAAAPAQQAGKAAAPAAPAQQAGKAAAPAGPAQQADKAAAPAAPAQPQAKPPAAKTP
>CP012670.1|AUX20788.1|1643955_1645560_-|peptidase-M16
MRATHPSERRRLRALSCLSSAIVAALGLTLPAYAAPPPAAAPQPGAPAAAAQAAAAPATGSVSVMIPVEKYTLENGLEVVLHEDRRTPVVAVNLWYHVGSKDEPKGKNGFAHLFEHVMFQGSKHVGEDMFFKYLERAGASDRNGTTSTDRTNYFETVPANELALVLWLESDRMGWLLDHANDETFTSQRSVVKNERRQNYENAPYGLVPQFLRAALFPEGHPYHLLTIGTPEDLDAAQMEDVRAFFKTFYVPNNATLVIAGDIDRARTKELVEKYFGPIPKGAAPPVASKPDPGDLATEKRLEIEADVELPRVTMSWVTPPGFAPGDAELDLVSNVLASGKTSRLYKKLVYDLQIAQDVHAGQQSSQLASTFQITATLKKGKSPEQALRLIDAELDRLRKAPPTKDEHERARAKLLSDLVFSMERVTARANAINYYNQLTGDPGYFPKDVARYEGATAADLQKAVVDLLPRDRRVIALVTPKPGAPKAGRLVKQTAAPAPAAKKAAAAPAVDEPAGAKPAIEKPAAGAAAPKGG

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Crispr_ID: CP012670_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_17

1660023-1660128

Orphan

Consensus_repeat	Method
GCGTCTCGGCAGGACGCGGCGCGTCCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_17

>merge|CP012670|17|1660023-1660128|CRISPRCasFinder
GCGTCTCGGCAGGACGCGGCGCGTCCCCGGACGCAGGCCCGGCTGACGAGCGCTGAGCCTCGCGGCGATCGGAGGCTCGCGTCTCGGCAGGACGCGGCGCGTCCCC

>CP012670|17|16|1660023-1660128|CRISPRCasFinder
GCGTCTCGGCAGGACGCGGCGCGTCCCC	GGACGCAGGCCCGGCTGACGAGCGCTGAGCCTCGCGGCGATCGGAGGCTC
GCGTCTCGGCAGGACGCGGCGCGTCCCC

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX20799.1\|1660538_1661021_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX20796.1\|1656668_1657634_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
CP012670.1\|AUX20806.1\|1672533_1674219_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235906
CP012670.1\|AUX20804.1\|1670367_1671576_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368185
CP012670.1\|AUX20807.1\|1674237_1675512_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|180777
CP012670.1\|AUX20791.1\|1648981_1651309_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368963
CP012670.1\|AUX20808.1\|1675950_1676997_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379232
CP012670.1\|AUX20790.1\|1648155_1648941_+\|short-chain-dehydrogenase	unknown	unknown	gnl\|CDD\|212491
CP012670.1\|AUX20802.1\|1667234_1668095_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|163507
CP012670.1\|AUX20794.1\|1654745_1655648_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379155
CP012670.1\|AUX20792.1\|1651360_1652941_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377875
CP012670.1\|AUX20801.1\|1663134_1667238_+\|protein-kinase	unknown	unknown	gnl\|CDD\|274846
CP012670.1\|AUX20795.1\|1655651_1656659_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235906
CP012670.1\|AUX20789.1\|1645656_1648050_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366506
CP012670.1\|AUX20793.1\|1652993_1654625_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377886
CP012670.1\|AUX20797.1\|1657626_1658253_-\|RNA-polymerase	unknown	unknown	gnl\|CDD\|224511
CP012670.1\|AUX20800.1\|1661237_1662989_+\|ATPase-AAA	unknown	unknown	gnl\|CDD\|225114
CP012670.1\|AUX20805.1\|1671589_1672438_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|368559
CP012670.1\|AUX20803.1\|1668120_1670340_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376866
CP012670.1\|AUX20798.1\|1659306_1659936_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237378

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX20796.1\|1656668_1657634_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	3.76383e-10
CP012670.1\|AUX20806.1\|1672533_1674219_+\|hypothetical-protein	gnl\|CDD\|235906	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau.	0.000360713
CP012670.1\|AUX20804.1\|1670367_1671576_+\|hypothetical-protein	gnl\|CDD\|368185	pfam04909, Amidohydro_2, Amidohydrolase. These proteins are amidohydrolases that are related to pfam01979.	2.76498e-23
CP012670.1\|AUX20807.1\|1674237_1675512_-\|uncharacterized-protein	gnl\|CDD\|180777	PRK06958, PRK06958, single-stranded DNA-binding protein; Provisional.	4.93419e-06
CP012670.1\|AUX20791.1\|1648981_1651309_-\|hypothetical-protein	gnl\|CDD\|368963	pfam06537, DHOR, Di-haem oxidoreductase, putative peroxidase. DHOR is a family of di-haem oxidoredictases. It carries the two characteristic Cys-X-Y-Cys-His haem-binding motifs. The C-terminal high-potential site functions as an electron transfer centre, and the N-terminal low-potential site corresponds to the peroxidatic centre. Its probable function is as a peroxidase.	6.29177e-128
CP012670.1\|AUX20808.1\|1675950_1676997_+\|hypothetical-protein	gnl\|CDD\|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	4.53602e-07
CP012670.1\|AUX20790.1\|1648155_1648941_+\|short-chain-dehydrogenase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	6.27663e-57
CP012670.1\|AUX20802.1\|1667234_1668095_+\|uncharacterized-protein	gnl\|CDD\|163507	TIGR03795, RNP_Burkhold, ribosomal natural product, two-chain TOMM family. Members of this protein family are found sparsely, mostly in members of the genus Burkholderia. Members often occur as tandem homologous genes, such as BMA_0021 and BMA_0022 in Burkholderia mallei ATCC 23344, or else have a duplication. The genes regularly are encoded near a cyclodehydrogenase/docking protein fusion protein of TOMM (thiazole/oxazole-modified microcins) biosynthetic clusters, suggesting a role in bacteriocin biosynthesis. The role of the putative natural product is unknown, but function as a two-chain bacteriocin is suggested. [Cellular processes, Biosynthesis of natural products].	2.40563e-21
CP012670.1\|AUX20794.1\|1654745_1655648_+\|hypothetical-protein	gnl\|CDD\|379155	pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.	1.9406e-14
CP012670.1\|AUX20792.1\|1651360_1652941_-\|hypothetical-protein	gnl\|CDD\|377875	pfam07586, HXXSHH, Protein of unknown function (DUF1552). A family of proteins identified in Rhodopirellula baltica.	1.21359e-55
CP012670.1\|AUX20801.1\|1663134_1667238_+\|protein-kinase	gnl\|CDD\|274846	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein. This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein. [Cellular processes, Toxin production and resistance].	0
CP012670.1\|AUX20795.1\|1655651_1656659_-\|hypothetical-protein	gnl\|CDD\|235906	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau.	0.000234038
CP012670.1\|AUX20789.1\|1645656_1648050_-\|hypothetical-protein	gnl\|CDD\|366506	pfam01186, Lysyl_oxidase, Lysyl oxidase.	7.83244e-39
CP012670.1\|AUX20793.1\|1652993_1654625_-\|hypothetical-protein	gnl\|CDD\|377886	pfam07631, PSD4, Protein of unknown function (DUF1592). A region of similarity shared by several Rhodopirellula baltica cytochrome-like proteins that are predicted to be secreted. These proteins also match pfam07627, pfam07626, and pfam07624.	2.25206e-43
CP012670.1\|AUX20797.1\|1657626_1658253_-\|RNA-polymerase	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	6.04952e-29
CP012670.1\|AUX20800.1\|1661237_1662989_+\|ATPase-AAA	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	2.30994e-67
CP012670.1\|AUX20805.1\|1671589_1672438_-\|uncharacterized-protein	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	8.38288e-05
CP012670.1\|AUX20803.1\|1668120_1670340_+\|hypothetical-protein	gnl\|CDD\|376866	pfam02624, YcaO, YcaO cyclodehydratase, ATP-ad Mg2+-binding. YcaO is an ATP- an Mg2+-binding protein involved in the peptidic biosynthesis of azoline. There three motifs involved in the binding are, in UniProtKB:P75838, 71-79: Sx3ExxER, 184-203: Sx6Ex3Qx3ExxER, and 286-290: RxxxE. Three slightly different functional families are represented in this family, proteins involved in TOMM (thiazole/oxazole-modified microcin) biogenesis, non-TOMM proteins such as UniProtKB:P75838, and TfuA-associated non-TOMM proteins involved in trifolitoxin biosynthesis. UniProtKB:P75838 hydrolyzes ATP to AMP and pyrophosphate.	5.02614e-90
CP012670.1\|AUX20798.1\|1659306_1659936_+\|hypothetical-protein	gnl\|CDD\|237378	PRK13406, bchD, magnesium chelatase subunit D; Provisional.	0.00259134

>CP012670.1|AUX20798.1|1659306_1659936_+|hypothetical-protein
MPPPPPVEREEPEEPEEPEELEKPKQPEEPEDDDGDGFRLRFGSTLGGGIIESPTGTGAVFSLSARLGFQFNHHLGIYYQNTPMVTLTPESTANSAGFEAGFIDYNSLLASFTVFHVIDLGAGPSLDYVAVASCGTEIPGISLEIPEAGCESTSAWYFGAHARASLILGGLTGSGPRRSGFAISADLHPVFLPEGPTITFTLGLGSEWY
>CP012670.1|AUX20797.1|1657626_1658253_-|RNA-polymerase
MTARAAVDPPSPPPAGAVPAVPASGVQPAPLDFAEVYEELFPFVWRTVRRLGVDASAHEDVCQEVFVVVHRRLPEFRGRSSLKTWVFGIVINVVQAHRRSLRRKSPAHRGNGETVDPELLAGPSDLSPYEAMTRAEAARVARELLASLDEEKRVVLLLAELEEMPATEIAQGIGVNINTVYARLRAARQAFSDAVRRHHARLRGGRHG
>CP012670.1|AUX20796.1|1656668_1657634_-|hypothetical-protein
MDELRPGERALLNALRDADEPTDDDRRRMRAAVWARIGLAGAAATAVTASAASAAGAGSAGAGAAGAGAAGAGSAGAASAGAAGATSAAVAKGTAVTLLGAPLKIGLATIVVGLATGAAVYLPASGDPLDAPRAVAAARIADPTPRALRAAAPSSAPSDESAPPAEASAPAEARASAEASAPAEASTPAEASAAPAMGAAPRAPAPRSPAPRSPAPRSPAPAAAAAARPGAEGLDAEIALLRDAQQALQAGQFAQALAKLNEHASRYPRGVLSTEREASRAIALCRSGRAASGRTIAARLLAKSPGSPLATRVRAACGKEE
>CP012670.1|AUX20795.1|1655651_1656659_-|hypothetical-protein
MHVSRWARAPSALQALIVAAVLPASALAAPAEPRAVDLRWEAPDGCPPADEVRSEIARLLGASEQHPPIEVEIAVARAGGARLRLDLRIRAPSPGERVIRGDDCASMSRAAALIVAMSIDPDAVARNAAAQPAAQPAPPPAVAAPVAGAPRPPPAAAVRPPAAAERDLEGALWLSAHIEQALVPAVGIGLAAGGGIRSGWLRADGAAGVVPSSSSRIAGMAAGAEFQLWFLEVDACARALERHLSVYVCALGRQHWLLARGREVDEAFARTAPIFAAGLGTLVERRFAGPLRVEGALHAVVPLRRPRFVVENLEGAVYRPPAAGLSARLGLALAF
>CP012670.1|AUX20794.1|1654745_1655648_+|hypothetical-protein
MVMVLLLGLSGCGADVEIAVGRMNPVSAASGSGGQEGSGGEAGSGGEAGSGGEAGSGGEAGSGGGGGHGTISCDVLPSPIHRYTFDGAGDVVADLIGGADGVILGGASLDGGGGLTLDGEDDYVDLPAGLLAGLGDVTVMVWVVRGRGGAYLRIVDFGLATGGEDPVEGEGGVGTSYLVITPSTGFEVRGVSALVSDSGVRGEVAIHAEPTLEDGEVHQVAVVFDGAAATVALYLDGALLGSEPVGFPLSAIEDVNNWLGRSQFDADPYFGGRYDELRIYREALAGCAVEAAFRAGPDRP
>CP012670.1|AUX20793.1|1652993_1654625_-|hypothetical-protein
MTFRLDRVFASPWLVAGGCLLGISCTGTLGSQGDGSQGDGSKDDPEQGAAVAPDRMPLHHMTASEYNNTVAHLLGTRLRPADGFPAFGAKGFDANVNALSNLSQVLVQGYYDAAKTLAEDAFSNEAQRAAILVCDPAEGAGDGCAREIIERFGLRAFRRPLEAAEVDRYAAQYAHALATLEMSPVEAVQHVVRTLLTSPNFLLRIEVGPDSERSPGALSGHEIASRLSYLLWSSMPDEALFDAAEGDELATEDELRRQVDRMLADPKSAAFFQNFFGQWLGTRTLPSHNADATRFPVWNDEVKGAMLDQVNAYFASFTTGGRPWSEFLTAPHPESRLLEPIYANDPEGVREGFLTLPAFLTLSSRADRTSPTSRAKTILEQFFCVPLGPPANVDIPELGAAGGDEGPIENVRQELEKHRASPDCASCHDVLDPIGLSLEIFDPIGAYRTAYPNGDPIDATGVYEGVAFEDISGLLPVLVEAARQEKCPTEQLFSYAVRRRPSGGDRARIEEITARWGSGTIADLVKEVVTSEAFRLRAKDEAR
>CP012670.1|AUX20792.1|1651360_1652941_-|hypothetical-protein
MKRLMTRRNLLRGAGVCLALPWLESLAPRGARAGELGTPKRFILCTFPNGAPHHWWETAPAFGKTLKGADFKLPRVLQHFAPVKSKMLMISRLGNYTWSTEQHPYIEPSHSRLNAALSTCVDADQLGREARQDLGEWVGNGVSVDQLIVQKAGPEQATRIPSLQTGLGVKPGFFDQRSYAYNQAISWKSPREPLKRSVNPRAVFDALVGAGAAQGGAVPGQSDEQARIEAERRAATEKSVIDGVLADANSLMNRVGSDDRKIVQQYLDSLREIEKNATRVQSTMTPPAGLGCSPIGKPGVVPEPPGQAEGLNENDSTEAGQYKHEDHAKVMIDLIVMAIQCDVTRVITHMLDDARSEFEYRCIPEDVRAQVGLAYRRESSLHYHGSQHGPGNLDRATQDGQYKIVQQSNLDFAAINCWLAQKSAQLAQRLDAIPEGDGTVLDHCVMVHMSEMRSHDHDGYDLPIVLLGGDGVFLNDAHVAYGALGSDRQLRDLWFTIMNQYYGLGVSSFGEDRRGEPNALLEEILR
>CP012670.1|AUX20791.1|1648981_1651309_-|hypothetical-protein
MVERRSRRWVFGGLDIVLGLLATGAAGLGCAGDLSPPGETPPGETPPGETPGGGGGQPGAPCAEASDGPAPPQAFALHCGGCHGAHGEPTGGFPDLFAYGGPLSEFTEQVRKGTDRMPAFDEQELAAGDLEAIYAYFASGAPPAATCDGGEVAPGACSGVSGKISPLFPAATGGKAITTRAADGTITLEAAGRVRGRHEREKEFSPFQPLYFENRSYKFVIEDAIPAGGGTIKFTWLPIANASEDQIINFRCWYTGDGNVFHANHGMDRISSTHWEFVVERNARENREIREGDLLEFEFGVFLDPATVEGRTSYYSDTFRYRVGSGELTPFDAPNEAALSGGDGTIPYIYEEPHLYYEQMALNIQQGSIQRFLEGRRLFHTDFATGEHSEGGNPVFDEHAGKAGPLSNQGACVGCHLHNGRGAPPEPGEAMATSVVRLFGAGASANGAPAVHPSYGRQLQDRAPGGSPGEGTATVAYTEEPGQFPDGTPYVLRRPTFRFDGLSAGPITSYSVRVARQVVGMGLLEAIAEEAVLERADGMDCNGDGISGRPNLIPDPVSGELRLGRFGWKAGKVSVPHQVADALVVDMGVTTRLFPVEECGEEQAGCQGGTGAGPELADEDLDRLSAYMRMLGVPPRRDTADPAVQRGEALFRQAGCASCHVPTMRTGSDHPFVELRDQIIHPFTDLLLHDLGEGLADTSTSDHLAGPSEWRTPPLWGIGLLEAVNGHTQLLHDGRARDVVEAILWHGGEAEAPKRRFMALPREDRDAVVAFLRSL
>CP012670.1|AUX20790.1|1648155_1648941_+|short-chain-dehydrogenase
MAFVVVITGASSGIGRSLALAWAKRGASVVLSARGQEALERVAAEVRAAGGEALPVAGDVTVEEHRAALCERALGAYGRLDVLVNNAGRGYYAPTLEIEPEKLEEIYRLNVVAPVRLAQLAIEPLTAAKGTIVMVSSIAGLAVAPRIGPYASSKFALEALSMTLRAELASRGVRVLVVRPGPVATPFHEHAVVIDNDVGYRPPGHKAQSPDEVAGRIVRAVDAGSEVLETSLFVKAASLAVRVAPGPARWFSKRMARRSGF
>CP012670.1|AUX20789.1|1645656_1648050_-|hypothetical-protein
MKNVAETLWMGSWLVAVAAGGCGTLAGPPSGAGGSGGGGRPGDVLCAGSDLVCPGGARCQIDAEGEPSGCAAACDDARACGDAACCSPGAACLRGRCVSADLALEPLAGAEAVTFAAVHVGADACEALEGCVGGSGRRMLLRFNVALKNVGDVSFTLGAPSESGVFTPNFCEGSYVVPRFFRARLTRGDAVLAEGALDARCIAMRGGRFGCDAQGLAPGEHVAQPGTAVCNALDVTGVPAGRYALAITVNPDRAFAEARYDNNTLVLPVDYPACDGAMCGGACCPAGHACEDGVCKLPDLRPSARRIVDTLRFSYRTFPADACEILERCVGGPGRRHLLEFEGRIENTGPGHLDAGPERDNPLFEYAQCHQHYHFKNFTEYRLLGADGEVVAQGHKQAFCLLDVAPLDPAAPAPPGAPGPGSTGCNFLSAGWADVYEVGTPCQWIDVTDVPEGDYVLRVAVNPIGVIAERSTADNVVEVPVRVPAFAPCVAEPEICGDLVDQDCDGIADNGCARPACASPRTEVCGNGADENCNGIPDDGCAPIRGADRCETPGELTGSMNYAAEITAANTPDVALPCGGEGGEVFFRFTLPSEEVVYLSTLESDLDTALALLQGDGCGGVPLRCARDTCGAARPGANLAARLPAGRYTVVVKAVRPGATGTVRLKLERASCLGEAAGILESSGLLRGDSTGAPIPAASPCGASSPEESYYVPLCPDRPVTLSSCGLSEFPMRLRVAEDACHTQRPRCSTPQSGCADDPDAASVTLETQQPGGSLGAVTVSGRTPVDFGPYRIFVLY
>CP012670.1|AUX20799.1|1660538_1661021_+|uncharacterized-protein
MSNINGIAAYSNSYQEYKHPTTGNKAPLLTVHHKLWTQTVTTNSGSYIQAEVWVSNDGQTMLRNINVTVTIQGGDGIWAPQFCDSAGNLQPGTFLPPFEMGDLQPGQSSAVHKYWWKAVKPNVPQNGADFDAQFTVIPDFQVVYADTDDYFTDKSHVKIG
>CP012670.1|AUX20800.1|1661237_1662989_+|ATPase-AAA
MLGHDVLPTLITRLMTATHFEGAATAALEAMLDCVHAALAESPFATSARLLRAMVHLRPSDGYQRLFGVEHRTGAQVEGTGYLTSANVWRWVSEHRCSVSIDVQRGVLHAWVPEGRVERREPIDAAGVPGHETRERMLGRDATHVHVVPLRTPGEGVSGMIAIEASCKAAAGQEFVWGDCEEQLELIATAAVAYLGALPPRPSCAARTDALLPVVGRATAGLIELLRVFAQQEETVLISGPTGSGKSRLARWCHEQSRREGKRFETLDLLSVPEELQMAELFGWKRGAFTGAMRDAAGAIARAAQGTLFIDEIDKLSLKAQAGLLRVLEERRYRPLGDEGSDKHADVRFIVGTNADLRAQVRAGKLREDLYYRINVLPVRLPPLSERLDELPLWAEYMLGRRHEEAGGGGAVRIAREAVDLLMSTPWPGNLRQLDNMVRRAYAIALSDRGGAGSELLLARRHVERALAYDGAPEPGTLFEQLLRTARAFVQEAEQREGSASPLSLDLIDAQRGLVLAVAVQRRGRDAAFALLGQEQLLRNRNHHRALKRELDRVRELLHVIGGEVDPALASLLDSADATAEGR
>CP012670.1|AUX20801.1|1663134_1667238_+|protein-kinase
MSSYNTRLSPGSTFEERYEIRSLLGEGGFGSVYQARQRTTGQSVALKLLRLDHESGARTERRIARFLREAKVCAQLHHPNIVQLIDSGRSSEGVLYSVFAFAPGETLADVIAREGALAPREATHLMLQALDALACAHAQGVVHRDLKPRNIMVISSGARRNALVLDFGIGAILGGVAAGGPPARLTATDEALGTPGYAAPEQLRGLDITTRTDLFAWGLVFLECLTGKMVYDGASAAEVLYRMLGPEPVPIPAEIERTSLGALLRRVTHKDVAARDLDARGVLQALEGLHPGSPGQHPSGSAAMSPGAHAPLDGVALLEPRRVQASGERRHVTAVCCVLDPVLEAARPVDDEDLDELVRRASSTCADVAAKHRGHVVAAFGHAVMLYFGLLCAEEDDAKRAARAALAIVEAIQGEREDLRRAHGARVEVRIGLHSGLVQASGLREGAAAGLALGATPRLAARIAREAPPSAIVVSAEAQRLLRASFELEDEGARCAGGREGAPGAFRLRRARADRGPPPTPDGTMGPIIGRSQEMDLLLDRWQRARQGGGQCALITGEPGIGKSRLARELRGRLVGDAHVYLEGRCSPETQNNALFPVIDALGRALELDRESSSRGRSARLEAQLARRGLAPAEAVPLLAPLFGLPIEPPYAPLQAGPQRQKELTLNAILSLLFGMAEEAPVLLLIEDLHWADPTSLALLGQFAREVPSAAVCLVLTARPEFVPPFPTTGMQQIHLSRLEAAQIGALIAELLGKKPLPRDVVEQIALRTDGVPLFVEELTRTMLEAGVLLERQDRYDLSRPLSDVEIPGTLRGLLLSRLDQLGRAKETAQIAAALGREFSEEVLLAVSRLEGAAVREDLSRLLGAGLVFRKRRLKGSGYTFKHALVQDAAYESLSRAARRQVHARIARTLEERFAGIVEARPELLARHHAGAEQKLEAIAYAQIAAQRALTQSAYAEASGHARDALEWLGATPPDRRRAELELALNGVLTQALMSTRGWADPEVKSTIDRSGALLEQLERDSPHRLPTLWSLFTYHHTASNRRAARDVAEELVSAAERSSDAGLRAAAMALRGITRYCDGEHVEARQALERAIALYDPAQHQDHGLKFGLDTQVLAKTLLAHLRWYAGDSAAAFQLVQDGIAWAREVRHVPSVAIGLLYGCQIYQFHGDRGAVEVMSGEILSLAKKHGLPAFEGYAAFLHAWAKGDASLARGIVEQLERLGCRVGLSYWGSLPAAIDAASGRLDAAIACVERCLSVCRAIDEHFYEPELYRLLAVYRLRREASDEGALAALRRAAELARRQAMSLVEALATVELQRRSGHDPSNRARLAELLESCPGLRAQLPPGEIDPLAAGGDGEVQRGLKGDCV
>CP012670.1|AUX20802.1|1667234_1668095_+|uncharacterized-protein
MNDHGLIEFRTAYLRAIARVWREGETSDFARDLTSGVQSKIDQCLSECGFSADCWPNLCVQLVRNGGVQWNPGDTGGWFSPVSKHEALTLRLPLDKAKVLRGVDQRYWAQALAEFYQLFPTPFGPIADPSQSGAKGATHQSLMAYPTKLGDFQSFLELGGVIARAIALAWRQQASGDMSFTNDLTTRAAGALQSWLGYISPWGIDLRVEPAPDGVRWIPPTDDASAGAWACGATREGKSLPLEDHLKNTLTLCLPDRPGKDATVWPIALAAYNNTGPAYPFTCCPA
>CP012670.1|AUX20803.1|1668120_1670340_+|hypothetical-protein
MAPLTLDRVLALRPDLRVEVLDGGHAFLLGERARFVLSGPRAAAVLALVDGRRTVDEILRAARGQVSEPEVFYTLEELCAGGYLVAATPDLPRESAAFWSGVGLDARAASEALRRTPVSVHAIGTGVGASWLAEALAQAGVAVCEAGAARVIVTDDYLSPELSRLHAEASARRAPWCPVKLVGVAPLIGPVLKPDIGPCWDCVAHWIRVNRPVEELVRRHRNDAAPPSPPAAGIEASVRAACGIAALVIARALAGADAAPPRNAEVLALDLAALELTRHAVVQRPQCPTCGDPGWMRAAGERPIALRPVEKAYRDDGGYRREAPRRTYARYRHLISPITGAVTHVVPVPGRSSDLRAVYASGYLVCPRHGVPRSNAFDKPCAGKGRTAEQAQVSALCEALERYSGVYQGDEARVRASAAELGPAAVPPDALLGYSDAQYRERERHNASTRDRSRWVPVPFDPAAVIDWTPGWSLSQNARRYVPLAYCYAEAPPESGVASCPTDGNGVAAGSCLEEAILQGLLERVERDAVGLWWYSQARRPAWDLESAGEPYFAALRDEYAQLGWALWALDLTHDLGIPVCAALARDAESDRFAIGFGCHLEARLAVQRALTELNQLFDPAGAHRAPWDHERLPSRDFLSPDPGAPRSRIGARPQLGGADLRADIQAIVQRLDEDGLEVIVVDKTRPDIGLSVAHVIVAGLCHFWPRFAPGRLYRVPHALGWVREPLVEGALNPVPLFV
>CP012670.1|AUX20804.1|1670367_1671576_+|hypothetical-protein
MRDGFRILDVDRHVMEPIGLWPEYLPADRMDLAPRLTPCIPEGETLASRLDRLGEDALLPVPPILTVAGRPVMREVSEVAHIEIGLAAARRHGALRAAERPEGHLAEMDRSGVDVALLLPTFASCLVYNDEIDAGRSRAYARAYNLWLRDFCAVAPARLKGAALLSRHDPASMVADLEWALGEGFGVVVLRPNPVLGTTLSSQVYGPFWQACARHSVPVLFHEGSHTRVSAAGADRFESYFGQHACSHPMEAMMALLSLIEGGVLESHPALRVGFLEAGCGWLPYWLWRLDEVEYARLAREVRARVRRRPSEYFQRQCWIALEPGEAMLDRVAAEIGPQRLVFGTDFPHLDHDLDGVDALFSLRETLGDAALRAILWDNPAALLGLPPAEPSDPGAAPRQRA
>CP012670.1|AUX20805.1|1671589_1672438_-|uncharacterized-protein
MKHPMSAPPRSPIPTTADQIRPGDPYELSEGRVVECLPTGRRGGRGNLVGGEVLDTDPAVEAAGVDVGVSPRPEMLRAPDISVGDIPDEPGWATAAPPLAVEYADMGQDEAELQRKIDELLAAGTRFLWVVRLHGARRVEVYEAPPAPRRRAPARAAGLASPARRPPRPSRVAYPGEELVAPGVLQNPVPVEALYDRKAAHEATLRNLLQRKGYAGLDAVKEEGLIEGRRQERVAALRAWVRDVCELLGIALSPERAAALDAMEEAELGALRDHLKRDRRWP
>CP012670.1|AUX20806.1|1672533_1674219_+|hypothetical-protein
MRSILRSMFTAAMGLSLAACAAAPPPATRAPGPPGDGRAAPAPPPPPLPEEQAFAVHGPLKDEWLPMLKPAPFDPKSALVPSSPIGVPAPPAACDAFARRAAAPAPACGDAQGALAALDAALAEGDPARRDARLAGLEACAGLEAGLARALRVELAPAACGDALTAPLLEAPPAGLRGDLYQVLLGQTLAARLARTAIEPPTLRPPYDVQRVVAFTKGPLFAWVTEQARAIEDLGRLGVALPFYAKGIVAVEAGRADMRLVEAVRSAPLPDAMRKDAELGNVYYGELDQLLEPWKQRGRDAALVGLRELSSVGVLRDARVEGARAMLSRLYGGRRVDALDALALPELPPAAPSSLEERLAGALPTYYAGRLLPPEAAARPGTLRMFLERGVPLPHRAALRAAELSPEARLLYARARLELGRLYWRAVDFDQATALLTAWPEGAARPAEATMLLALALGLRNGPEDAALMMRRAPLAGLGLGELAALDWVARAKPASPYAGLAAYDAALIKQIAAPQGADAGYWSDVAARFREAQALLSGPLARAAEERARAADEIARAAAR
>CP012670.1|AUX20807.1|1674237_1675512_-|uncharacterized-protein
MFAPDVRLALCVAMVLVPPLACVAPRDTPGSADGGDGHAKTGEARRSLCYGHEIVNVTFLPETYHWEDPAHLLSVSEGVGPRTLEVTVAASVQPTVTLTGTVTGTFGPTGAQPSLGTAGMPIIPGLPPLSGIPGFPGAPFPPGTPGTPGPPGTPGPPGTLSTTGSRSPTGCQPSSSMPADCMPSIGQPPWSLPGNGIPPNDQPPWSLPGNGIPPNDQPPWSLPGNGMTSSGEPSWSLPGNCTLTSADLSGALGFSVSETITLQASSVYFVPMAAYARVSAYPVFQKITWDIVSTSGFGWDTGAPMSVVVGSGVVLKPIGIYFSTYRIYDQASMGGGVISPGPVLVPVGDEGNGGGGLGAGGAGGADDPTGGAGGAGGADGTGGAGGTGGTGGAGGTGNAGGAGGTGSAGGGVAGTGGAGGAGGG
>CP012670.1|AUX20808.1|1675950_1676997_+|hypothetical-protein
MNAVCAVAASLTLLGCAQGLDPWPEGEAVGAPGPPLGVAVQRASEYGWEAIQVLDVNADGLGDVFWRNPERGLAATWLMEGNRLLAPGPILPCPLGGGWAATTADFDGDGLADVLWNHVEQGLVAVELVEGVQPLALGPVIPGPGGGGWHTIPSDFNGDNMADVLWGHAGQGAMAIWLMEGTRLLAPGPVIPGPPGDGWDVVSAGEFNVDGLADMVWAHGESAQMAIWLMEGTRVLAPGPEIPGPLGDGWVFTWTDDFDADGIEDVLWNHPEQNLMAVWLMEGTRVRVPGPEIPGPPGDGWRARTAGDVNGDDMADVVWQRGDTMTVWLMEGTRVLAPGPLIPGPYGG

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Crispr_ID: CP012670_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_18

2029320-2029428

Orphan

Consensus_repeat	Method
CCACGCCGCGCGCGCAGCGCTGAGCGCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_18

>merge|CP012670|18|2029320-2029428|CRISPRCasFinder
CCACGCCGCGCGCGCAGCGCTGAGCGCGGCGCGCACCGGCGCGGCGCGGGCCCGCGAGCCGCGCCGGTCGGGAGCCGGCGCCACGCCGCGCGCGCAGCGCTCAGCGCGG

>CP012670|18|17|2029320-2029428|CRISPRCasFinder
CCACGCCGCGCGCGCAGCGCTGAGCGCGG	CGCGCACCGGCGCGGCGCGGGCCCGCGAGCCGCGCCGGTCGGGAGCCGGCG
CCACGCCGCGCGCGCAGCGCTCAGCGCGG

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX21080.1\|2021509_2022640_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX21078.1\|2019303_2019807_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|373059
CP012670.1\|AUX21082.1\|2024277_2024832_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX21086.1\|2027766_2028060_+\|pterin-4-alpha-carbinolamine-dehydratase	unknown	unknown	gnl\|CDD\|376528
CP012670.1\|AUX21094.1\|2034242_2035067_-\|membrane-protein	unknown	unknown	gnl\|CDD\|224279
CP012670.1\|AUX21091.1\|2031455_2031971_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX21087.1\|2028086_2028926_+\|ribonuclease-III	unknown	unknown	gnl\|CDD\|234633
CP012670.1\|AUX21085.1\|2026995_2027661_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX21092.1\|2032156_2032663_-\|CarD-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224248
CP012670.1\|AUX21079.1\|2019953_2021339_-\|Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
CP012670.1\|AUX21089.1\|2029513_2030551_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX21096.1\|2036325_2037936_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX21084.1\|2025948_2026755_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX21098.1\|2038833_2039499_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|224321
CP012670.1\|AUX21090.1\|2030843_2031362_+\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|349967
CP012670.1\|AUX21093.1\|2033296_2034232_-\|Ppx/GppA-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|223326
CP012670.1\|AUX21081.1\|2022776_2024144_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240573
CP012670.1\|AUX21083.1\|2024865_2025900_+\|peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|234605
CP012670.1\|AUX21095.1\|2035548_2035923_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237855
CP012670.1\|AUX21097.1\|2037964_2038609_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237865

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX21078.1\|2019303_2019807_+\|uncharacterized-protein	gnl\|CDD\|373059	pfam14424, Toxin-deaminase, The BURPS668_1122 family of deaminases. A member of the nucleic acid/nucleotide deaminase superfamily prototyped by Burkholderia BURPS668_1122. Members of this family are found as toxins in polymorphic toxin systems in a wide range of bacteria and in the eukaryote Perkinsus. Members of this family typically possess a DxE catalytic motif in Helix-2 of the core fold instead of the more common C[H]xE motif. The Perkinsus versions are predicted to be inactive.	1.60611e-09
CP012670.1\|AUX21086.1\|2027766_2028060_+\|pterin-4-alpha-carbinolamine-dehydratase	gnl\|CDD\|376528	pfam01329, Pterin_4a, Pterin 4 alpha carbinolamine dehydratase. Pterin 4 alpha carbinolamine dehydratase is also known as DCoH (dimerization cofactor of hepatocyte nuclear factor 1-alpha).	9.11391e-35
CP012670.1\|AUX21081.1\|2022776_2024144_+\|hypothetical-protein	gnl\|CDD\|240573	cd12953, MMP_TTHA0227, Minimal MMP-like domain found in Thermus thermophilus hypothetical protein TTHA0227 and similar proteins. The subfamily includes an uncharacterized protein from Thermus thermophilus (TTHA0227) and its homologs from bacteria. Although its biological role remains unclear, TTHA0227 contains a minimal metalloprotease (MMP)-like domain consisting of 3-stranded mixed 2-beta sheets and a HExxH (x could be any amino acid) motif. It may belong to a superfamily of bacterial zinc metallo-peptidases, which is characterized by a conserved HExxHxxGxxD motif.	6.38617e-30
CP012670.1\|AUX21083.1\|2024865_2025900_+\|peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|234605	PRK00059, prsA, peptidylprolyl isomerase; Provisional.	3.83004e-17
CP012670.1\|AUX21092.1\|2032156_2032663_-\|CarD-family-transcriptional-regulator	gnl\|CDD\|224248	COG1329, COG1329, Transcriptional regulators, similar to M. xanthus CarD [Transcription].	2.5854e-45
CP012670.1\|AUX21079.1\|2019953_2021339_-\|Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	0
CP012670.1\|AUX21097.1\|2037964_2038609_-\|hypothetical-protein	gnl\|CDD\|237865	PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional.	4.66841e-05
CP012670.1\|AUX21087.1\|2028086_2028926_+\|ribonuclease-III	gnl\|CDD\|234633	PRK00102, rnc, ribonuclease III; Reviewed.	1.28051e-92
CP012670.1\|AUX21098.1\|2038833_2039499_-\|HNH-endonuclease	gnl\|CDD\|224321	COG1403, McrA, Restriction endonuclease [Defense mechanisms].	2.97926e-19
CP012670.1\|AUX21090.1\|2030843_2031362_+\|RNA-methyltransferase	gnl\|CDD\|349967	cd18094, SpoU-like_TrmL, SAM-dependent tRNA methylase related to TrmL. tRNA (Um34/Cm34) methyltransferase TrmL catalyzes the methyl transfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH at position 34 in both tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	7.69993e-79
CP012670.1\|AUX21093.1\|2033296_2034232_-\|Ppx/GppA-phosphatase-family-protein	gnl\|CDD\|223326	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism].	2.31222e-76
CP012670.1\|AUX21094.1\|2034242_2035067_-\|membrane-protein	gnl\|CDD\|224279	COG1360, MotB, Flagellar motor protein [Cell motility and secretion].	2.65356e-31
CP012670.1\|AUX21095.1\|2035548_2035923_+\|hypothetical-protein	gnl\|CDD\|237855	PRK14900, valS, valyl-tRNA synthetase; Provisional.	1.9264e-09

>CP012670.1|AUX21087.1|2028086_2028926_+|ribonuclease-III
MLPSELLRRLDLGLEGDLPHLEEALTHPSFSNEQRGSRRVDNQRLEFLGDAVLGLCVTELLMERFPGAREGELSMMRSALVNTDALAAWARGIELGAALRVGRGAEVAGERDQTNVLADAAEALVAALYLDRGFESARALSRKIVASPLEKLASGSSLGRDAKSELQERVQARGAASPRYRLVGTEGPDHDRAFLVAVEVDGEVIGTGQGRSKKLAEQAAARAALEALAAGVAPGPAPVSPPEGAPAGGPDGAPEGRGAPPESGGASPSRPMNDRGPSR
>CP012670.1|AUX21086.1|2027766_2028060_+|pterin-4-alpha-carbinolamine-dehydratase
MGKRDRLPDDEIAGFIAAHPGWARAGERIERSYSFPDYGAAVGFVMRVALLAERRDHHPDVALSWGKVRVAWSTHDAGGLTALDLELAELTDRLNPA
>CP012670.1|AUX21085.1|2026995_2027661_-|hypothetical-protein
MTALRLRYPPASMTALRACPFCRELFEAREAQTCPACGLRLEALSRLPPSYDALHEDPDEPLPPHREPLPWTYAGRFRGPLLALAVLGLAAFFAPWVHETAPELRDLSGFGLARRLGWMWAPAVAFFVMIPLVLTRRSIHQMRGARVAVAFLAATALTTVALRLLFTPASTLLRPVRFTWGYGLYATGAIALLALIIAAFFGGRLDDLPTGQPRRGDEVLH
>CP012670.1|AUX21084.1|2025948_2026755_-|hypothetical-protein
MAKESASVRRELVRDDEVFDVPAAVLCACCGQPDCAGCAAASDGSSGVVAIIPWERPVGSVWSRLWATSKATTLGAETFFAMMPDGALPSAMRFALLAETLAILAMIVALLPVAALALPSLTLELARNPAARDSALQCLAVGVPGLTVWMVLAHTVHGAALDLGARRQGARPERRRALRFGLYACGWDLMAGPLGALVMLVTSGVQGAGQVLSASLRVPGKASTALLQGVYALRPEAAERARRAGSVAALALTVASGLAAVALVLAVS
>CP012670.1|AUX21083.1|2024865_2025900_+|peptidyl-prolyl-cis-trans-isomerase
MRARTVKLSLAAAAMAVAGAASTGLPLRAEAQPAPAAAADAVVARVGDEVITARDVERRLAQIPPFQLQSLGRTPEEIRRRFVSQVLVRERLLAQGAASQRLSERADVQDRVRGVLRSALLQRIQAEVAESSPVTDEEVRAYYEAHRDKFSSPAMVALWRIVVATREEAEAVLAELKEDPSPQRFKDLARERSLDKATGMRGGDLGFVALDGATAEPGLTVSPALLEAAARVKDAELVPEPVPDGDRFAVLWRRQSRKAVSRPLEQEAPAIRQILAHGKVEARVKQLLERLRAKDVSGHAPELVDLIDVTSTGDLQPLRRPGTLASSRRPGAPAPSPVPRHDLR
>CP012670.1|AUX21082.1|2024277_2024832_+|uncharacterized-protein
MLLPRIVKTKSSPAVAAGSIKAPRSSKRDGDAQNRRGSADAVEKRRAARRFNELLLGGGGRAGDGRTERRRRRLLAELAEGVSRRGKRALKPIDVLSRVEELLELGEPLASIREAYPPPPPVEVTAELVEGLRHLHRAYGFSADAYRFVGLDAHALRKAGVLRGGQREGRGSAPPPEAARHGAA
>CP012670.1|AUX21081.1|2022776_2024144_+|hypothetical-protein
MPRSAQRPLPARVHLPSGRVARLSDAAARAHAAAVLGARADRDAGERAPIGACARDVQILAGPSVLADARGAPLDPLGLPLPDAHVLRALLAFAGVVPEEPGAYSCENCGAPFEVAPSSLLEIGPFTDGELDDPELDRPFDFGASHPVPALRVGRALCRSVRFVERTVEEAMPLLRAPCDGALRVTPSLVAAMGVAALGRERRASVIADALARAPDDAWAAIVDLYHEARYPARLVAVHRCAGCGARNDLDVPLARELERAPLRAPGDGEDDRGAPGSTPRRAGAFPDLDAFEARVRAAAERIYAARGVRNIDLFIDAGVPACDDGGEPLLGCYAPGTPADDLGIARPPEIRIFYRTFRLEAREDPGFDVDAEIDETIDHEVTHHLHHLAGSDPLDDEEREQIEREQLRRVGHAEAARRARRGALAELGGFVRATWPIWVITAVGSALAWCAGGR
>CP012670.1|AUX21080.1|2021509_2022640_+|hypothetical-protein
MSADGPATAEGDLERTPFAHLFVYAIDHRITGALVLLDPTGAEHTLRIVRGAPVKIRPSDGYARLGEILLEERVISADTLADALATRGLLGDVLLLSGCLDTATIDWLAQVQFVRRMMRLFALPPETRYRYFDGLDALADWGGDPAKVEPLGLLWAGLREHGERSTRLERTLERIGATPLRLHPAFEPGRFGLVEGERAVIDALQRSTPTLAALVRSGVAPEPLVRKLVYALAITRYLDFGRGWPVGVEPSSSVPPASAASLSLGRMQLRPTLHRVGAAAPDPAGDGERAPVVGRARRRDRWSSEPSPSSVVAGASPLIGGSLAAAVAAELAGATGTEDERATRGPPRADRDRDAWSPSPTAEGGAPGGSPASEDP
>CP012670.1|AUX21079.1|2019953_2021339_-|Fis-family-transcriptional-regulator
MPRGHVLVLDDERAILTTLQKALSLEGYTVDVAGGVAVAEEKLAKRSYDIALFDVSLPDGDGVELLQRVRAAGSDLPVLMMSGHATIDAAVRATRLGAIDFLEKPLSTDRLLLVLENTLRLVRAEAEAKALRTQTGQVGELIGESRAMLELREQIARAAKATATVFVTGERGTGKELVARAIHGASKRARGPLEKMNCAAVPSELIESEMFGHEAGAFTGATKQRRGKFERASGGTLFLDEVGDMPLAMQAKLLRVLQEREIERVGGHETIKVDVRVVAATNRDIEAACREGQFRPDLYDRLNVLPLSLPPLRARREDVPLLARHFLALATQANDRPGMALTDGAMRMLVAYSFPGNVRELRNIIERLVILTPDDTIDEGDVKVCLGGQQAAMKGGLFRPGVPFRVLSEEAERTILEEALGHHGGQMAATARGLGLERSHLYKKCKALGLRGDKGEAEEAE
>CP012670.1|AUX21078.1|2019303_2019807_+|uncharacterized-protein
MPVGFASAFVRRVLRFGGRLSGRERASFTRLRARAGDVRTTYLARPVGKGNVATLEYVSLVQQEPIRVEATSRAKSPSPLPRSRSQGGYFEPAIDPSTKRPMDTDAEYKALSALAQRLDATATWQTMGVVYLFTERQPCASCASVIAQFEERFPLVSIVVAFDHPFP
>CP012670.1|AUX21089.1|2029513_2030551_-|hypothetical-protein
MDPALARLVRDSGCRLVGPDKGLYYNPASRYERCQTDDAAFAKLIAQYGFAVAPSAMHAARTTGYGGFEIGIEADFTKIDSDADYWKRGTQGPQDPTTKDFSIENRSPDAFLQHYALKVRKGFPFGFELTTAVGFLANTNLISAGADVRWALFEGFRKGIPAIFPEVAVGGSVRTVTGTEEFQLTVAGVDAQVSKPLPISGTVVVTPYAGYQWLRIFGDSGLIDLTPNTDAVSYCNFRGVNSPATPVEGQGGAPVPYDGQPVCSGGSQADFNNTVVFDAVRMTRHRLHFGAQLRFQMVKFGAHFITDVVPPEDANQGEAYEIAGENKFAGLGQQWTLAIDLGAVF
>CP012670.1|AUX21090.1|2030843_2031362_+|RNA-methyltransferase
MLKDGRPRLRAAPLDPPFRIVLVEPEIPQNTGNIARLAAATQSPLHLLGRLGFRIDERSVRRAGLDYWHLVSLEQHLNLAHFQNRHPDARLRLFSAQATRSYLDADFRPGDALVFGKESVGLDPELLARMPDDVFGIPTLGAVRSLNLANAVSIVLYEALRQAGALAGAAPG
>CP012670.1|AUX21091.1|2031455_2031971_+|hypothetical-protein
MAVHRQGSRRSDRRAASRLRGVGVAIALSLAALASAGCSRRPPNGTPDGAVRELIARLRQLHGDPADAKAAFELLSRRARDNLATRAQRYSAATGKAIAPEAMITPSRFLLRFEPQRYVAQIAGAHALVDVAGLLPGERAQVPCVYEDAGWRVDLALPPLPPEQKRPGSDL
>CP012670.1|AUX21092.1|2032156_2032663_-|CarD-family-transcriptional-regulator
MQARSEIQFKVGDKAVYPAQGVAEVVNIEEKDIAGNRQRFYVLRILDTDRKIMVPVSNASAVGLRQVISEQEIREIFDILRERTIAFDNQTWNRRYRGFMDKIKTGSIYDVAEVLRDLYRLKTDKQLSFGERRMLDTARTLIVKEIAIARGQTEEQVKTEIEAIFLAN
>CP012670.1|AUX21093.1|2033296_2034232_-|Ppx/GppA-phosphatase-family-protein
MRVAAIDIGTNSVLLLIAERRGGDVVALAERATITRLGQGVDAARALAPEAVERTLACLARYGEELRALGAQRVDAVGTSAMRDAAGGEAFIARARELIGAAPRVISGREEAELTFAGALTGLEVPAQGPRVVFDVGGGSTEIIVGGADGAVVQSASLDVGSVRLTERHIRSDPPAEAELDAVRADARAALATLPAERLAAAPTLVGVAGTVTTLAAIVRDVVPYEGARVHGARISRAEIVALTSRLASMPLAARRQLRALDPARADVIVAGSVLIEEILAWISRISGSSVDLVASDRGVRWGLAERLCLP
>CP012670.1|AUX21094.1|2034242_2035067_-|membrane-protein
MLVRRSTSWLLLGATLLAGSGASGCGYSEEEMQAKIREIEGLKTQLSAEQAQNKKAKSELDEAAARIEQLKSQLKAAGVDISNLNANLEQQARALDDFRRRAQQLEDIKKRFEVLREKLQALTKLGLNVTVRNNRMVIQLPGDVLFDSGRETLKKDGQDILLKVAEVIRNDAGLSARSFQVAGHTDNTPLAGGRFKDNWGLSVMRAREVLAFLLQPEDKGGGGLKPERWSASGYGDTDPVKPNDTPENKQANRRCELVVLPNVEEMLDLKTLTQ
>CP012670.1|AUX21095.1|2035548_2035923_+|hypothetical-protein
MAAKKTAKKPAKKVTKSAKKPAAAKAGKVAKKPARKAAKKAAPKRAVAKKTPKRAAAKKPAKKVAKKPARKAAGKRAAAPKKAAATRGRAAAKRAPAKAASTRGARKSTPAPAPVSVAPSDESE
>CP012670.1|AUX21096.1|2036325_2037936_-|hypothetical-protein
MSSDASGILRGSGHPGRNAYAELLRDTRGLRREQQQAREAWFARLAADKKEETLFELEILLKGVACFANPRNHPGAGRRQTIVSHDFHEHLQHARDGMARVVQLTRTMLGDRDRAFVFQRYLETVLPEDTARTRLLHATMAQESPESSLFVLRHGFTNLIEVAGGLLRLPRVNFRLFYAHLATAMREIAQSAFFNPLHALEFRPEFDRIASTQVLELIQRVPGEQAHRLVALTFLALFRMLRYLRLLDAIAVDHSDRHVAGRGYLVLAVLRSDARALSNYLRRRAGSLLADSFERDLMRVAASDIVARHDELAAEGHRLLATKAALTGLAANLRLEMRRAFEHDLPPADALVSESEYRVRLRAASHGLRPALQNAILFLGRALGAKLEGGRVFDDQAARRATSDRLRRDVWMFAQIARAFASKARQTGPAPDRWTGIASFAFVREFLSYFKAMGYPLLRVGDYPRVDAFIAAMTALEDSDLLDPQRLDAAIRECEAFHEFLMKLFEQISKREDLVGVPFDRKGAARALRLYLGERT
>CP012670.1|AUX21097.1|2037964_2038609_-|hypothetical-protein
MRAMRPCAAASAVFTGVLLAAALFAACSSGTAPPSPPDSAPLGSPAPPPATDPGAEPPVASGGAAAAPVLPDRPAPRRKAETVEDCKELATEITNEPPDGGVVMNNAMTSADAGSSDRLQPLVDTIKAKRDAFRCCFDLYARKHPGAQGKITWQLKLKPDGAVEEAIIVRDKSDVTAPQVESCMADLAASISWARSPSGKETVLTYPFDFKRRN
>CP012670.1|AUX21098.1|2038833_2039499_-|HNH-endonuclease
MPNGEAKVPGGSPHEEPDLGDGFQGFRRERKTEPLDLPVLVVNRFFQPVQITTARRAFLLLFGGAALAIDEAGDLHDFSAWRCLPVREKDDGLPVVGGSLRVPRVLHLRRYDRMRRPTIRLTRKNVMLRDAHQCQYCARRPPLRDLNIDHVLPRSRGGEDSWENLVTACRTCNLRKGWRTPDEASMRLIRQPLPPRWSSTMQILLGLPHPFDEWDPFLKTG

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Crispr_ID: CP012670_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_19

2162194-2162290

Orphan

Consensus_repeat	Method
CGCGGGCCGCGCCGCGGTCAGCGCGGGCCGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_19

>merge|CP012670|19|2162194-2162290|CRISPRCasFinder
CGCGGGCCGCGCCGCGGTCAGCGCGGGCCGCGCGGCGCCTCCTCGCGGGCCGCGCCGCGGTCAGCGCGGGCCGCGCCGCGGTCAGCGCGGGCCGCGC

>CP012670|19|18|2162194-2162290|CRISPRCasFinder
CGCGGGCCGCGCCGCGGTCAGCGCGGGCCGCGC	GGCGCCTCCTCGCGGGCCGCGCCGCGGTCAG
CGCGGGCCGCGCCGCGGTCAGCGCGGGCCGCGC

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX21197.1\|2156040_2156673_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|99749
CP012670.1\|AUX21196.1\|2153209_2155108_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|341298
CP012670.1\|AUX21195.1\|2152223_2153213_-\|chemotaxis-protein-CheX	unknown	unknown	gnl\|CDD\|130823
CP012670.1\|AUX21205.1\|2166754_2167210_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX21200.1\|2159887_2160571_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235401
CP012670.1\|AUX21210.1\|2173253_2173808_+\|N5-carboxyaminoimidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|376377
CP012670.1\|AUX21206.1\|2167206_2167824_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|350304
CP012670.1\|AUX21211.1\|2173927_2175118_+\|phosphoribosylaminoimidazole-carboxylase	unknown	unknown	gnl\|CDD\|235674
CP012670.1\|AUX21208.1\|2171004_2172765_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|334019
CP012670.1\|AUX21198.1\|2156819_2157842_-\|GTPase-CgtA	unknown	unknown	gnl\|CDD\|237046
CP012670.1\|AUX21203.1\|2163908_2165123_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|163518
CP012670.1\|AUX21192.1\|2149153_2150596_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|273628
CP012670.1\|AUX21199.1\|2157938_2159435_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|236901
CP012670.1\|AUX21194.1\|2151855_2152227_-\|mannose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|380355
CP012670.1\|AUX21204.1\|2165135_2166554_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369642
CP012670.1\|AUX21207.1\|2168304_2170980_+\|phosphohydrolase	unknown	unknown	gnl\|CDD\|237512
CP012670.1\|AUX21193.1\|2150612_2151887_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|131480
CP012670.1\|AUX21201.1\|2161188_2162190_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224513
CP012670.1\|AUX21209.1\|2172870_2173197_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|143581
CP012670.1\|AUX21202.1\|2162295_2163609_-\|inositol-3-phosphate-synthase	unknown	unknown	gnl\|CDD\|369641

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX21197.1\|2156040_2156673_-\|hypothetical-protein	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	2.1737e-31
CP012670.1\|AUX21196.1\|2153209_2155108_-\|hypothetical-protein	gnl\|CDD\|341298	cd17643, A_NRPS_Cytc1-like, similar to adenylation domain of cytotrienin synthetase CytC1. This family of the adenylation (A) domain of nonribosomal peptide synthases (NRPS) includes Streptomyces sp. cytotrienin synthetase (CytC1), a relatively promiscuous adenylation enzyme that installs the aminoacyl moieties on the phosphopantetheinyl arm of the holo carrier protein CytC2. Also included are Streptomyces sp Thr1, involved in the biosynthesis of 4-chlorothreonine, Pseudomonas aeruginosa pyoverdine synthetase D (PvdD), involved in the biosynthesis of the siderophore pyoverdine and Pseudomonas syringae syringopeptin synthetase, where syringpeptin is a necrosis-inducing phytotoxin that functions as a virulence determinant in the plant-pathogen interaction. The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.	0
CP012670.1\|AUX21195.1\|2152223_2153213_-\|chemotaxis-protein-CheX	gnl\|CDD\|130823	TIGR01762, syringomycin_biosynthesis_enzyme_2, chlorinating enzyme. This model represents a a group of highly homologous enzymes related to dioxygenases which chlorinate amino acid methyl groups. BarB1 and BarB2 are proposed to trichlorinate one of the methyl groups of a leucine residue in the biosynthesis of barbamide in the cyanobacterium Lyngbya majuscula. SyrB2 is proposed to chlorinate the methyl group of threonine in the biosynthesis of syringomycin in Pseudomonas syringae. CmaB is proposed to chlorinate the beta-methyl group of alloisoleucine in the process of ring closure in the biosynthesis of coronamic acid, a component of coronatine also in Pseudomonas syringae.	1.31181e-165
CP012670.1\|AUX21200.1\|2159887_2160571_-\|hypothetical-protein	gnl\|CDD\|235401	PRK05306, infB, translation initiation factor IF-2; Validated.	0.00516843
CP012670.1\|AUX21210.1\|2173253_2173808_+\|N5-carboxyaminoimidazole-ribonucleotide-mutase	gnl\|CDD\|376377	pfam00731, AIRC, AIR carboxylase. Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyze the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.	5.05662e-81
CP012670.1\|AUX21206.1\|2167206_2167824_+\|uncharacterized-protein	gnl\|CDD\|350304	cd18737, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	5.29299e-08
CP012670.1\|AUX21211.1\|2173927_2175118_+\|phosphoribosylaminoimidazole-carboxylase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	1.58703e-149
CP012670.1\|AUX21208.1\|2171004_2172765_+\|hypothetical-protein	gnl\|CDD\|334019	pfam00339, Arrestin_N, Arrestin (or S-antigen), N-terminal domain. Ig-like beta-sandwich fold. Scop reports duplication with C-terminal domain.	2.26257e-07
CP012670.1\|AUX21198.1\|2156819_2157842_-\|GTPase-CgtA	gnl\|CDD\|237046	PRK12297, obgE, GTPase CgtA; Reviewed.	0
CP012670.1\|AUX21203.1\|2163908_2165123_-\|hypothetical-protein	gnl\|CDD\|163518	TIGR03806, chp_HNE_0200, conserved hypothetical protein, HNE_0200 family. The model TIGR03805 describes an uncharacterized protein family that contains repeats associated with the formation of a right-handed helical stack of parallel beta strands, homologous to those found in a number of carbohydrate-binding proteins and sugar hydrolases. This model describes another uncharacterized protein family, found in the same species as TIGR03805 member proteins, usually as the adjacent gene or in a fusion protein. An example is HNE_0200 from Hyphomonas neptunium ATCC 15444. Sometimes two members of this family are with a single member of TIGR03805. The function is unknown. [Hypothetical proteins, Conserved].	1.46332e-33
CP012670.1\|AUX21192.1\|2149153_2150596_-\|uncharacterized-protein	gnl\|CDD\|273628	TIGR01444, 2-O-methyltransferase_NoeI, methyltransferase, FkbM family. Members of this family are characterized by two well-conserved short regions separated by a variable in both sequence and length. The first of the two regions is found in a large number of proteins outside this subfamily, a number of which have been characterized as methyltransferases. One member of the present family, FkbM, was shown to be required for a specific methylation in the biosynthesis of the immunosuppressant FK506 in Streptomyces strain MA6548.	4.77884e-24
CP012670.1\|AUX21199.1\|2157938_2159435_+\|sensor-histidine-kinase	gnl\|CDD\|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	2.28011e-60
CP012670.1\|AUX21194.1\|2151855_2152227_-\|mannose-6-phosphate-isomerase	gnl\|CDD\|380355	cd02226, cupin_YdbB-like, Bacillus subtilis YdbB and related proteins, cupin domain. This family includes bacterial proteins homologous to YdbB, a Bacillus subtilis protein of unknown function. It also includes protein Nmb1881 From Neisseria meningitidis, also of unknown function. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	5.52854e-51
CP012670.1\|AUX21204.1\|2165135_2166554_+\|hypothetical-protein	gnl\|CDD\|369642	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase. Members of this family are glucose/sorbosone dehydrogenases that possess a beta-propeller fold.	1.70349e-34
CP012670.1\|AUX21207.1\|2168304_2170980_+\|phosphohydrolase	gnl\|CDD\|237512	PRK13800, PRK13800, fumarate reductase/succinate dehydrogenase flavoprotein subunit.	4.92454e-14
CP012670.1\|AUX21193.1\|2150612_2151887_-\|alpha/beta-hydrolase	gnl\|CDD\|131480	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. [Energy metabolism, Other].	2.02931e-11
CP012670.1\|AUX21201.1\|2161188_2162190_+\|hypothetical-protein	gnl\|CDD\|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	4.70708e-14
CP012670.1\|AUX21209.1\|2172870_2173197_+\|hypothetical-protein	gnl\|CDD\|143581	cd07177, terB_like, tellurium resistance terB-like protein. This family consists of tellurium resistance terB proteins, N-terminal domain of heat shock DnaJ-like proteins, N-terminal domain of Mo-dependent nitrogenase-like proteins, C-terminal domain of ABC transporter ATP-binding proteins, C-terminal domain of serine/threonine protein kinase, and many hypothetical bacterial proteins. The function of this family is unknown.	0.00667022
CP012670.1\|AUX21202.1\|2162295_2163609_-\|inositol-3-phosphate-synthase	gnl\|CDD\|369641	pfam07994, NAD_binding_5, Myo-inositol-1-phosphate synthase. This is a family of myo-inositol-1-phosphate synthases. Inositol-1-phosphate catalyzes the conversion of glucose-6- phosphate to inositol-1-phosphate, which is then dephosphorylated to inositol. Inositol phosphates play an important role in signal transduction.	0

>CP012670.1|AUX21201.1|2161188_2162190_+|hypothetical-protein
MVVNGNAKSVTEEVIETLDQILDTGDLFVSRRVEESEGIARILVDRGYGTILTGGGDGTFTVVVTAVVNEAKRRGLPLPRFGLLRLGTGNSLAWVLGASGDAGAKAGLAVDLQRLRAEAGSRNLRLVEAEETLSPFCGFGIDAVMLRDYNAVKALLARGPLKRLAPGPVAYAVAATTRTIPSYLVRRTPHCRIINEGNDAIRVGEKGAILGAPIRKGGVIYEGPAKIVALSTIPYYGFGFRMFPYADDRQDRMQLRVSMISPLSFVRNFSSIWSGEYGDLETVFDYFVDEVTIEMDPPTSFQIGGDVRGERSRVRVRLTEPIRIVDFYAPPRG
>CP012670.1|AUX21200.1|2159887_2160571_-|hypothetical-protein
MAKITKGSSEKATGTKKKSSSSTKGGAEAQLAKPVNPVIKEDSKSSASASKRKLGLRGAAPWAARHAAKHAAEARARAAEPAPPGSARATIRVPTGAEEIKAKIAELHNQTQKIRTLRKRLDKGFFDIGVVLAEIQQQELYQAKGYGSFEAFLEREIDLGKQTSLRLIKVAHVFQREVALDYGMDRLFLALAALEGDAIPKAAPSAVPSAPGSKPPLPLKPPMRIVG
>CP012670.1|AUX21199.1|2157938_2159435_+|sensor-histidine-kinase
MRARILIVDDNTSLAANLRDVLEGARELDVEVALAPDGKQGLAAARRDGFDVAVVDVKLPDASGLELIAPLRAASPHGEIVLVTGFATVDAAMAALRAGAFAFILKSFRPEELISTVAQAIEKISLKREREELERRYRAIIDAADVLILGLTAEGRVALFNPRLSALTGVACDAAIGTPFSEALVDEPEQRRFNQSLLGVVEGDAAAEVEVGVRDAVGAIRRVRWHLSGVRDGGGETDLVYGIGIDVTERRALERRAADAEALNAMAPLALGLAHEIRNPLNAAVLELHLLSRSIDRLSDEAIREPMKRRVGIVEAEIARLGRLLGEFLELARPRAPLREPVDISRVVRDVLDLEEEAFASNRVEVVRDLADDCFALGDVEKLKQVVLNLVVNALDVMPDGGVLRACTSVDTNEVWLSIGDTGPGIDPTILAEIFDPFFTTKAAGTGLGLAIVRKIVDLHGGRVKVDTHRVTGTTVRVWLPRFTVERPVSSPPYGATL
>CP012670.1|AUX21198.1|2156819_2157842_-|GTPase-CgtA
MRFVDSCRLKVVAGDGGNGSIAFRREKYVPFGGPAGGDGGRGGDVVFVGDEGLSTLLDFTYARTLEAERGEHGMGSDCHGRAGADRVEKIPVGTQIFDAESGELLADVTEHGQRVVVARGGKGGRGNLHFKSPHDRAPRRAEPGEPGEAREIRLELKVLADVGLLGFPNAGKSTFVAAVSAARPKIGDYPFTTLTPTLGVVEIGGGVRSGGSSFVIADIPGLIPGASEGVGLGIRFLKHVERTRALLHLVTLDPGEGREPLADYRALRKELKKFSPELAERPEVVALTKADLPEVREAYPKLKSRFAKAKVKLHLVSAATGAGVPELIRELAALVRAPDA
>CP012670.1|AUX21197.1|2156040_2156673_-|hypothetical-protein
MYPEPQAPRLLSVAEWAALPEDQAGELIDGRLVEEEMSDCVHELVVAWLIQTLRDWLIPRGGFVFGSEVKYALKPRRGRKSDVSVFLSRSRKPPARGPVGIPPDIMIETVSPAPRDGRRDRVEKMEEYAAFGVRWYWLLDPQLRTLEIYGLAQDGRYVHRLGATGGLLQAVPGCEGLTLDLDALFREIDQLEAADQQETSRRQGSAESEG
>CP012670.1|AUX21196.1|2153209_2155108_-|hypothetical-protein
MLEIRSGARGQAPVERTQPSSGRCLHEIFTARALEHPDRVAVSAPEGDISYGELNARADRLARTLLGLGVGPDVLVGLHVDRGIDMIVGLLAILKAGGAYVPIDPTYPAERVQLLVRDSAVSVIVSVSRIASLGLGGGAAKVVLADRDLAPAGAELPGAPQARASESNLAYVIYTSGSTGKPKGVLVEHRNVVRLFEKTRAWFGFDERDVWTMFHSISFDFSVWEIWGALLHGGRLVIVPFDVSRSPARFLALLRDQQVTVLNQTPSAFRQLVAADLACDPPAPLSLRLVIFGGERLDPEALAPWIARRGDQRPQLVNMYGITETTVHASYRPIVRQDLAAPEISPIGVPLPDLQFHVLDDSGRPVPDGAPGELHVAGPGVTRGYLNRPELTAERFLRDPSGEPMYRSGDRVVRRPNGEYAYLGRTDDQIKVRGFRIEPREIELCLAGHPDVLASVVVPHDYGDGDVRLVAYVVPRPGAQPDPAWAEQVGAALQARAAAALPVHMRPSAYVAMASLPLTAHGKIDRAALPAPAAGQRVADLDGDAADAGDTIEAQIEAIWREILDLPRVRKDDDFFDLGGTSLALIRMFGRVNAHFDMDLDPAVMGDGATIAQLASCIGKELSNKQPSRVQS
>CP012670.1|AUX21195.1|2152223_2153213_-|chemotaxis-protein-CheX
MNIASGTGPAFSLTPHETSEFHRLGYAGPFTLYEPDEMKELWRRERLKLLDRSAAIYQDEAARSGVTNIANYDRHLDNGFLASHICRPEIVDRVASVLGPNVLCWRTEFFPKYPGDEGTDWHQADTFANASGSPQIVWPESEEFGGTITVWAAFTEATVDNGCLQFIPGTHRTMFYDETKRMHYDPSQINSVEKGSVRRGFFGYDYRQLQIDPSWKPEESKAVSMVMRPGQFIMFWSTLMHASHPHSGKTKDMRLGFVSRYVPTSVRIYPETEIIEEYGGKVSLEKYGAVLVSGRNEFTHNRIATSTTRGHRFVCRDITAAPAQQGALA
>CP012670.1|AUX21194.1|2151855_2152227_-|mannose-6-phosphate-isomerase
MSGDAVERVSLAEKLALVDRYWAPKIVGELNGQYVKLAKFSGEFVWHKHDSEDEMFLVVKGELTLKLEGRDIRLREGDFAIVPRGVLHLPVATGEAHVLLFEPKSTVNTGELDNELTTASEWI
>CP012670.1|AUX21193.1|2150612_2151887_-|alpha/beta-hydrolase
MSLLPPLSGSDPRAPAGACEEPGARARAAVRRLSAAMLSVAPLASVLDAPVRAAATWSGAAPNGRPTRGERGAEIQALLDRLADAVAAPRVLLHRDDAPLSAFELIVSDRLALASLLELPPEVLRAMPREVDEIAKDPRARGAEAVLARSEIASWDGSRLRVYVDGPGDRKAVVLVPACGMPIGLCEPWMRRLAQDFRVVTWESRGLFGAMGTAEEFDARAHDVEAQARDLLAVMDHVGVERAHAAALCGGAVIALAAAGMAPERISSMSLWHGDYELGQDAPKTQHQRDVQTLMAMAGRGRAQAAGLQKMFRRPSVLAKVRADMAHHVMYPYASGELLYRYGRLNGTIMEHDCRPLLHRAGQPTLVVTSHDDATAHPEGSRYVAGKLPRAELHVGEHGDHLSLFEAGSRLGDLAAGFIASEAN
>CP012670.1|AUX21192.1|2149153_2150596_-|uncharacterized-protein
MSHHDKDLIGALTACLRRHAGVEQAVVVSGGREPRSLVAYIVPDAHRAGEIRRACALEADGRLEGLSLHEPGADLLVAQRNRTETDFLYREIFLDNAYLRHGIELPERACIVDVGANIGMFSTFAAKTCKDARIVAIEPIAELSRAVRANAEIHRADITVLNCAMGSEAGRTDFTFYPNNTVMSGRFADAEDRDVLRAYLVTGEGAQDGRLLDDLVADRMVMERRSCEVMTLRQVVELQRIEEIDLLKIDVEKAEMDVLRGMDESTWAKVAQLVIEVHDIGGRLGDVLKTLAGRGFVVAHDCDARMVKTGCYTVYAHRAQGRRPAAKGWAPAPAEHWPSRRRLADDLRASIASQLPGHPLPERFVFVSALPAEASLREHAAASGAGSAPRAPEGSQGEVESRLAGIWRELFGEGELRHDTDFFELGGNSLTAVRLLARVEDSFGVDVLAPDDVFTASRLGDMAAAIDAALAARQAGGGAA
>CP012670.1|AUX21202.1|2162295_2163609_-|inositol-3-phosphate-synthase
MKQPKEIREAEGKLGVLLPGLGAVATTTIAGTLLARRGLAAPIGSLTQLGTIRLGRRTDDRAPRIKDFLPLAGLDDLVFGAWDVFPDSAYESARHADVLERRHLDAVREELERIRPMPAVFYPEYVRRLHGTHVKKGASKADMVEQVRADLRAFLRETGATRAVAVWCGSTEVYLEPAEVHASIARFEAGLAEDHPAISSSQIYAWACMKERIPFANGAPNLTVDFPAAWELAKKQEVPIAGKDFKTGQTLMKTVIAPGLKARMLGITGWFSTNILGNRDGEVLDDPESFRSKEVSKLGVLETILKPEAYGDLYGKLFHKVRIEYYPPRGDAKEGWDNIDLVGWLGYPMQMKINFLCRDSILAAPIVLDLALLLDLAQRAGLRGTQEWLSFYWKSPMTAPGLYPEHDLFIQSMKLKNTMRWLMGEDLITHLGNEYYD
>CP012670.1|AUX21203.1|2163908_2165123_-|hypothetical-protein
MLTFAPRGRSWQAAAASLLLSGCSGCGAQETPRAEPLPAPPPRPGAAAPPSARGTAADGRAGSGQAAAPPAPPPCKEGDEDPEDLRCTGLYSDFSARALAAGVREYRPAFELWSDGTEKTRWIYLPPGSTLDVSRMNDWIFPVGTKLWKEFRAPASGAHRRIETRLLWKTAEDRWTRATYVWSEDGARALQVKTGVPEVPDAPGFAVPAQVDCIRCHAGKTDNPLGFEAVLLAAPEAGGLTYAELVRLGLLARSDGGPLPDAAALDVPGDAVERRALGALHVNCGVSCHHPRGVATHFEMRLDIDARGRVGDVRDTRVVQTAINQPSKLRPPTARPGAPLYRIRPRDPDRSAVLYTMSRRDVPGAPPEQMPPLATRRVDEATVAAVRAWIEAMTPAAGYPRAAP
>CP012670.1|AUX21204.1|2165135_2166554_+|hypothetical-protein
MPERPSHRRAAARAACMTRAYHRTAWCLLLAGSVAACEKRVQVAGPPEGPREGGTVGQTTAGSAAQAATAAPAAAQSAPAPERATAAQGTSAAQGAPAAQQGASAPPATDPGLARPAKCSGIPPLKLTLVASGLDQPTYVAAPPGDPARLVVLEKTGTIRLIKDGAVVPTPFLDARSRVYFPAPNAEGGLLGLAFHPDYATNGRFWIHYSSSPRGNVVIQEWKRAADSGDVAHPEPVRTLVDVKHSAWNHVGGMLAFGKDGHLYAAIGDSARSPSPAPDLSSKLGKILRIDVDQPDEAPAGNMTGGDPMIWDYGLRNPWRFSFDRLTGDLYIGDVGQKSWEEILVERPGQGRNDYGWDAMEGAHCYPPGATCAPRGVPPAVEHPRSEAGSIVGGYVYRGAKIPCLRGRYLYADYVTGRFFSFVWDGKAATDRVELTAVLRPNGLPSSFGEDAAGEIYVVMFNTGRLYRIDPE
>CP012670.1|AUX21205.1|2166754_2167210_+|uncharacterized-protein
MRSAPRGSFRYDFAVYDGQGRLSALLEAKRRFGTDSSWARSWHAMAAGGKEPPADVNVVLVTPDRIYAWRPGAGAAANPDWILDAVSWFEPYFQRLQIPAAEVDPHVFEAIVGLWLHDVVQGDMPADSDTQRAQGLLEALRGGEVVSRVAA
>CP012670.1|AUX21206.1|2167206_2167824_+|uncharacterized-protein
MRVYAESNFVLEIVLEQEQHLACEELINLALGGSIELAVPAFATLEPHGTIVRREVEGDRLRKELALRMREVQRTASMAADASRLRDASELLIRAEHNASKRFLEVRARLLDAARIIALDGAALRAAAALVDEFGLKLPDAVMLASVLADATARPSPSLFLNRNTKDFYDPGIVARLGETRCEFVGSFDGGLARVRKMLETTSAG
>CP012670.1|AUX21207.1|2168304_2170980_+|phosphohydrolase
MTRPRPLYYARSVRRSPPLLRRLPHVLLVVAASAATLAPPGDAAAFLWPNVPEQIARALRSGDASERRLAATRVGELPPETALGLIQKGMADPDVEVRLHLASAAVHFRMPRAGDLVIEWLGEGDARLRLAACDVIRAAPTDRSVVALGRVLGDPDPHVRLAAAAAMGAAGLPDAVSPLLGHLDDGSPEVRAEVARALGRIGDARAVVPLIGKVQDSVPEVRRATARALGELGDARAAGALTLALQDPSQDVRVEAVTALGRLRSDEATPAIAELAARSPGSPGSFSGARRGDSGTSSDDVREAALRALGRIGSDAAVKVLLAALAKDDPAAPRSAVRDALVHAGQAAAGGGAGPAAGGAGAPRRAVAQALIAALAAAPSPSTAAGAALVLGELRAREGLPALVRGMQRGAVPLRHGLRALAALGDPAALPSVLELLGDADPSVRREAIRAATALLDPAHPDGRAVDPARALLVDPATPPDEKLALVRLLGRTGSPRAQAVLLPLASARSAPLRLAVIEALGAARAAGELGAAVDAALLAALDDESGDVRLRAAVALSRVAGPGSARALLQRLTVAAEQDRGALGIALSGALSRADGARDRDLARDVAAAVASAPDAARDALLEGLGRMPGQAAGALLARMAPAASIDDRRKIAEALAGHAEAGAALRKLAGDPDPGVRANAVWSLGAVGDRGALAPLLPLLKDPDAAVAGNAAAAIGRIAGRVGEPPRAAAALCGALADARPYVRANALAGLTAAGARCDGAAARDLLARDPAEAVRLAAADHLARAGGEAERRALARCASEDRNATVAARCAHPAAPPSGAEDVAVFVVPFDAGRGGAGRDAPVPRAPFALVRADGLMRLGVADRRGEVFERGAPGGPLRLAVPAPLVK
>CP012670.1|AUX21208.1|2171004_2172765_+|hypothetical-protein
MLRSRPDVELRMSRIVHPGDVVLVELVLRCRARTPVDAIELHLEGMQAARVDERVLVPPHFLSLVARVAGQTTLPEGEQRYRASFPLPADAPCSYLGTRAEIRYGITLSIAIPWWLDVQESYEVRVTPRPRARPARSPVAGTTARGDSPFVEVSLDDQVFAPGDEISGAVALGNVQGRNVRGIEISLVGVERLLGADPAASSRATEAHRFTAFRRADSRDEGRELSFRFRIPRSVAPSFDAGWIALVWGLEVRVELARSDDITHTTPLVVGVFDRPPGVGAMRRQIGSGRWRAVWDAVGARHGLALDPLELRLSGAIAGCAAVVSIDAGASSGGALLGELRWPSWGLDLEVGVRRFLLALSSDDDEGFGRRYRVRGRDPGQVRAVIAGPLRRALLAFDDVRLDDERVIVRSRTPGHDQPWLGAFLERLAALAAEIRAASDRVPPPTPMAGMRPAWERFAAELHGRLEVGRMCIRDAQLDGATFHIDTCFERGPQPTCSEVTLVLDPPLEAALDPDDPEPMRPVSPGAREVIRGLRARTRALRIAQHAVAVTLPAPIEDPATLRDLLGALLLLSALLRGARVAGPYR
>CP012670.1|AUX21209.1|2172870_2173197_+|hypothetical-protein
MLDKLSREERLQLMRFVCSFAWADLQVREQEREFVRKMILRLDLDADEAKEVRGWLEVPPAADEVDPMRIPRAHRQLFLETAREMISSDGEVGEEERETLSLLEQLTR
>CP012670.1|AUX21210.1|2173253_2173808_+|N5-carboxyaminoimidazole-ribonucleotide-mutase
MSTTAQGGAGEGRAPEDMEASSTGRPWVGVIMGGKSDHEHLAVTSELLTQLGIPHEVRVVSAHRTPDRMFEYASTAEGRGIEVIIAAAGGAAHLPGMVAAKTVLPVIGVPIPATALNGLDALLSIVQMPKGVPVATMAIGKPGAANAALFAAAILSGKHPELRERLAAFRGAQEAAVLRDANLG
>CP012670.1|AUX21211.1|2173927_2175118_+|phosphoribosylaminoimidazole-carboxylase
MPIAPGSTIGILGGGQLGRMTALAARTLGFMVHALDPDPDCPARSVLDRCVVARFDDAAQAADLAAQCDVVTLEIEKVARDSLVAAARFAPVRPSADVLSMVQDRGVQKSWLSRNGFPVGPFREVATSGELLEATRAMGGACFVKSCVGGYDGRGQMRLSAGAAPAEAGAAAREADARFASLGGQRCVVEQALDLEAELSVLVARSPSGKLAVYPPALNHHRDQILDWSLLPGPLSAAVTGQAVQIALDLAVGLRVEGLLVVELFLLKDGRLLINELAPRPHNSYHASEVACATSQFEQAVRAVCDLPLGSVEIVRPAAILNLLGDLWLGETPPAFEAALEIPGVRLHLYGKRIARPGRKMGHLSATGSTPEEALVAAKLAMARLTAHAGLPLPGR

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Crispr_ID: CP012670_21

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_21

3388196-3388272

Orphan

Consensus_repeat	Method
ACGCCGTGCGCGCCCGCCCGCCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_21

>merge|CP012670|21|3388196-3388272|CRISPRCasFinder
ACGCCGTGCGCGCCCGCCCGCCCGCCCGCCCGCGTGGGCGGGCGGGCCGAGAGACGCCGTGCGCGCCCGCCCGCGCG

>CP012670|21|20|3388196-3388272|CRISPRCasFinder
ACGCCGTGCGCGCCCGCCCGCCCG	CCCGCCCGCGTGGGCGGGCGGGCCGAGAG
ACGCCGTGCGCGCCCGCCCGCGCG

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX22098.1\|3387277_3388135_-\|molecular-chaperone-DnaJ	unknown	unknown	gnl\|CDD\|197617
CP012670.1\|AUX22090.1\|3374722_3377974_-\|restriction-endonuclease-subunit-R	unknown	unknown	gnl\|CDD\|223683
CP012670.1\|AUX22102.1\|3391918_3393160_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX22099.1\|3388421_3389267_+\|3-ketoacyl-ACP-reductase	unknown	unknown	gnl\|CDD\|187611
CP012670.1\|AUX22094.1\|3383163_3384111_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|371058
CP012670.1\|AUX22095.1\|3384513_3385677_-\|transposase	unknown	unknown	gnl\|CDD\|372671
CP012670.1\|AUX22108.1\|3400176_3400971_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378632
CP012670.1\|AUX22104.1\|3393330_3393789_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX22103.1\|3393190_3393427_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX22101.1\|3391397_3391901_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|341119
CP012670.1\|AUX22092.1\|3379103_3379943_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|341205
CP012670.1\|AUX22091.1\|3377982_3379107_-\|2-hydroxyacid-dehydrogenase	unknown	unknown	gnl\|CDD\|379118
CP012670.1\|AUX22106.1\|3394840_3395554_+\|lipoprotein	unknown	unknown	gnl\|CDD\|239266
CP012670.1\|AUX22096.1\|3386336_3386543_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX22100.1\|3389628_3391353_+\|Putetive-hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
CP012670.1\|AUX22089.1\|3374009_3374726_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|307807
CP012670.1\|AUX22093.1\|3380406_3382806_-\|restriction-endonuclease-subunit-M	unknown	unknown	gnl\|CDD\|223363
CP012670.1\|AUX22107.1\|3395629_3400135_-\|protein-kinase	unknown	unknown	gnl\|CDD\|226132
CP012670.1\|AUX22105.1\|3393791_3394790_+\|protoheme-IX-farnesyltransferase	unknown	unknown	gnl\|CDD\|260120
CP012670.1\|AUX22097.1\|3386590_3387274_+\|dioxygenase	unknown	unknown	gnl\|CDD\|379858

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX22098.1\|3387277_3388135_-\|molecular-chaperone-DnaJ	gnl\|CDD\|197617	smart00271, DnaJ, DnaJ molecular chaperone homology domain.	7.98236e-12
CP012670.1\|AUX22090.1\|3374722_3377974_-\|restriction-endonuclease-subunit-R	gnl\|CDD\|223683	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	3.45322e-133
CP012670.1\|AUX22089.1\|3374009_3374726_-\|hypothetical-protein	gnl\|CDD\|307807	pfam01863, DUF45, Protein of unknown function DUF45. This protein has no known function. Members are found in some archaebacteria, as well as Helicobacter pylori. The proteins are 190-240 amino acids long, with the C-terminus being the most conserved region, containing three conserved histidines. This motif is similar to that found in Zinc proteases, suggesting that this family may also be proteases.	6.89229e-60
CP012670.1\|AUX22094.1\|3383163_3384111_+\|uncharacterized-protein	gnl\|CDD\|371058	pfam10446, DUF2457, Protein of unknown function (DUF2457). This is a family of uncharacterized proteins.	8.06606e-08
CP012670.1\|AUX22095.1\|3384513_3385677_-\|transposase	gnl\|CDD\|372671	pfam13683, rve_3, Integrase core domain.	3.49807e-19
CP012670.1\|AUX22108.1\|3400176_3400971_-\|hypothetical-protein	gnl\|CDD\|378632	pfam11303, DUF3105, Protein of unknown function (DUF3105). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.	2.36344e-34
CP012670.1\|AUX22101.1\|3391397_3391901_+\|hypothetical-protein	gnl\|CDD\|341119	cd17036, T3SC_YbjN-like_1, T110839 is structurally similar to type III secretion system chaperones and YbjN family proteins. This family includes protein T110839 from Synechococcus elongatus that is structurally similar to type III secretion system (T3SS) chaperones (T3SC) that bind effector proteins, and is homologous to YbjN, a putative sensory transduction regulator protein found in Proteobacteria.	6.77351e-09
CP012670.1\|AUX22092.1\|3379103_3379943_-\|hypothetical-protein	gnl\|CDD\|341205	cd17524, RMtype1_S_EcoUTORF5051P-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit TRD-CR, similar to Escherichia coli UTI89 S subunit (S.EcoUTORF5051P) TRD2-CR2 and Archaeoglobus fulgidus VC-16 S subunit (S.AfuORF1715P) TRD2-CR2. Escherichia coli UTI89 S subunit (S.EcoUTORF5051P) recognizes 5'... CCANNNNNNNCTTC ... 3' and the recognition sequence of Archaeoglobus fulgidus VC-16 S subunit (S.AfuORF1715P) is undetermined. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It also includes TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases, such as Pseudomonas putida Jo 4-731 Type IIG restriction enzyme/N6-adenine DNA methyltransferase (RM.PpiI), and type I DNA methyltransferases such as Bacillus cereus BDRD-ST24 M subunit of Type I N6-adenine DNA methyltransferase (M.Bce24ORF51270P). RM.PpiI recognizes 5' ... GAACNNNNNCTC ... 3'.	7.4144e-71
CP012670.1\|AUX22091.1\|3377982_3379107_-\|2-hydroxyacid-dehydrogenase	gnl\|CDD\|379118	pfam13310, Virulence_RhuM, Virulence protein RhuM family. There are currently no experimental data for members of this group or their homologs. However, these proteins are implicated in virulence/pathogenicity because RhuM is encoded in the SPI-3 pathogenicity island in Salmonella typhimurium.	1.03261e-150
CP012670.1\|AUX22106.1\|3394840_3395554_+\|lipoprotein	gnl\|CDD\|239266	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c oxidase (COX). They contain a metal binding motif, typically CXXXC, which is located in a flexible loop. COX, the terminal enzyme in the respiratory chain, is imbedded in the inner mitochondrial membrane of all eukaryotes and in the plasma membrane of some prokaryotes. It is composed of two subunits, COX I and COX II. It has been proposed that Sco1 specifically delivers copper to the CuA site, a dinuclear copper center, of the COX II subunit. Mutations in human Sco1 and Sco2 cause fatal infantile hepatoencephalomyopathy and cardioencephalomyopathy, respectively. Both disorders are associated with severe COX deficiency in affected tissues. More recently, it has been argued that the redox sensitivity of the copper binding properties of Sco1 implies that it participates in signaling events rather than functioning as a chaperone that transfers copper to COX II.	1.08768e-44
CP012670.1\|AUX22100.1\|3389628_3391353_+\|Putetive-hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	4.36232e-06
CP012670.1\|AUX22099.1\|3388421_3389267_+\|3-ketoacyl-ACP-reductase	gnl\|CDD\|187611	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs. Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	3.87559e-104
CP012670.1\|AUX22093.1\|3380406_3382806_-\|restriction-endonuclease-subunit-M	gnl\|CDD\|223363	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms].	3.15749e-128
CP012670.1\|AUX22107.1\|3395629_3400135_-\|protein-kinase	gnl\|CDD\|226132	COG3604, FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains [Transcription / Signal transduction mechanisms].	2.62832e-126
CP012670.1\|AUX22105.1\|3393791_3394790_+\|protoheme-IX-farnesyltransferase	gnl\|CDD\|260120	cd13957, PT_UbiA_Cox10, Protoheme IX farnesyltransferase. Protoheme IX farnesyltransferase (also called heme O synthase, heme A:farnesyltransferase, cytochrome c oxidase subunit X [Cox10]) converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of the heme B porphyrin ring with a hydroxyethyl farnesyl side group. It is localized at the mitochondrial inner membrane. Eukaryotic Cox10 is important for the maturation of the heme A prosthetic group of cytochrome c oxidase (COX), the terminal component of the mitochondrial respiratory chain, that catalyzes the electron transfer from reduced cytochrome c to oxygen. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways.	5.58705e-101
CP012670.1\|AUX22097.1\|3386590_3387274_+\|dioxygenase	gnl\|CDD\|379858	pfam16554, OAM_dimer, dimerization domain of d-ornithine 4,5-aminomutase. This family is the short dimerization domain of the enzyme D-ornithine 4,5-aminomutase. It sits between the TIM-barrel pfam09043 and pfam02310. The enzyme is an alpha2-beta2-heterodimer that converts D-ornithine to 2,4-diaminopentanoic acid by way of radical propagation from an adenosylcobalamin to a pyridoxal 5'-phosphate cofactor.	1.31701e-25

>CP012670.1|AUX22098.1|3387277_3388135_-|molecular-chaperone-DnaJ
MQLPSRLSTSTLGDLLGALHRQRTTGLLELCELRTPSGSTVPGRQHRIQLLSGLVTAVETPLRVPRLGEILAREGHASEPSIQRLAALVATHRGRRTGEVLVAAGLVPASAVERALRLQLRARLEALFAIEEATICFHTARPLAGSLREVGPLSPGDFLHGRPRARDRYRHAGAPRSAPSWGSAGAPRSAPSWGSAGAPRSAPSWGSAGAPRSAPPRGVRADERRRRALDLLGLGEGATEAEIRRAFRRLAAGLHPDRGAALPGEGALRTARFAELSAAYHLLVA
>CP012670.1|AUX22097.1|3386590_3387274_+|dioxygenase
MVQMSFTLRVLPGDRAREAAKRFAEAHGLREPLVTAMEQASREHTYFVVYGHSQHGVDLSDIEVEELAAQPLTRADIEAQARKLGRKIVVVGACTGSDAHTVGIDAILNYKGFAGEKGLESFKCFDAHNLGAQVENAELCEKAKALGADAILVSQVITQRNCHKENAAALIEMVKAQGFRDRVILLLGGPRIDHNLAVELGFDAGFGPGTKPTTVASFLVERLVGRA
>CP012670.1|AUX22096.1|3386336_3386543_+|uncharacterized-protein
MAVLLLIRGNFPQWCYSRDSRLRRVLGDLMSTTFALSPEDRSISAGAPARGAVRGSTTSVLVVYIKEV
>CP012670.1|AUX22095.1|3384513_3385677_-|transposase
MPWKETCSVDERLQFIAQVNESDETFAELCRRFGISRKTGYKWVERYEQAGPRGLEERRPVAHTFPHATPAAIVNALVELRKERPTWGPKKLRARLESMGLEGLPATSTIGELLKKHGLIRPRRRRVVMPTSAMPSTLAPAEQPNDTWCADFKGHFALGDKTRCHPLTLTDQASRYLLKCEGVAKPDEASVRPHFERAFREFGLPNRIRSDNGPPFATQGIGGLSALSVSWIKLGVVPERIEPGKPQQNGRHERMHKTLKAEATSPPEATLAAQQRVFDRFRHEYNDQRPHEALGQRTPASRYTPSRRTMPSKPSSPEYPDTMAVRRVGDMGRLQFGGANTFVSKLIANEPVGLLPIADDVWELYYGPVLLAQVTLKNKELQLAKAR
>CP012670.1|AUX22094.1|3383163_3384111_+|uncharacterized-protein
MSKPRTSKSPKSPKSPKSERAEAAALAPIDEAPVEATPTELDAETTAFLARVHTVLFNIPRYLGRARRHGYTQKEHDLGWELYATASGKNRRFEHWLAEGDHREVAAGLSVERMRLLQEIDDFENLWFPRMRVIIPRVIPRESAARFTAAFFKNLSQQPLGPAVVDSVKTFLNRVDELATSAEPGARELYRTLGERGLTPKKIESMRRLIAAAEELRSSDRTAPAVSAAEIAKAKEAQLAALQSLRLWFNDWATTFRGIFNTREQITLGLTTLKRRKKDAEAEAAEPEDEEDDEAEDDDEDDDDDEDDDDGAADP
>CP012670.1|AUX22093.1|3380406_3382806_-|restriction-endonuclease-subunit-M
MARLTLPQLERHLFKAADILRGKMDASEFKEYIFGMLFLKRCSDVFDARFEELVAKDLARGKREAEARKRAGHPSFYTDTFYVPEEARWGYLRDEAHRNIGDTLNKALAAIEGQNTSLDGVLAHIDFTRKVGQSKIPDKNLRDLIDHFSQHRLRNEDFEYPDLLGAAYEYLIRDFADSAGKKGGEFYTPRAVVRMMVRIAAPDEGMHVYDPCSGSGGMLVLSHEYLDERQKNVRNLRLYGQESNGGVWAISKMNMLLHGIADADIRNDDTLANPRHREDGELMRFNRVISNPPFSQNYVLKDLPFKERFRHGFCPESGKKADLMFVQHMLAVLRPGGMVVTVMPHGVLFRGGAEKQIRTSILDDDLLDAVIGLAPNLFYGTGIPACLLVLRAKGAKPKELRGKVLFINADREYAEGRAQNQLLPEHIEKIVSTWQAFRDVPGFASVVGREVLRENDDNLNIRRYADNAPPPEPHDVRAHLHGGIPKAEVKAKAALFEAHGLDPRRLLRERDERYLDFVDGIGDKAALKKRLDEDPGMAARERQLAEAVEGWWKKARRELRQLPVSGAIMPLRARLLASFEKAVRPVGLLDAFKVTGVIATWWGAAQNDLKTLAAHEYTGLVEAWASSIRAALEDDEATENPLEHPLLKKLLPEYMAELGELEAKRAELDAEIKAAQPGEDEEEGEAEERRSEEEVKALKKELGAVKKQRKALEGELVQRLEEGVAKLDDEGAETLVAGVLRESLDDIFERYVGEHQRTVVAAFEGWWEKYSVTLIAVEQERDALSSRLRQFLGGLGYET
>CP012670.1|AUX22092.1|3379103_3379943_-|hypothetical-protein
MPSLPQQRLIAEILDALDKSILTTERLVAKLNRMKQGLLHDLLTRGIDENGGLRDPEQYPEHFKDSPLGMIPKMWSVLPLGDVVPHVAYGVSVPLGFHSTGIPVLRMNNLKDGETDVSDLKYSASATTRRLLLRPGDVLFNRTNSIEHVGRTGIWRGQLELASFASYLVRLDPEPARLNNEFLNRWLNWPCTQMRIRRYATPGVHQVNINPTNLRKTMIALPSSISEQVAIVEALVAHEATVAAEVRELTKLRLLKQGLMDDLLTGRVRVTPLLAESTP
>CP012670.1|AUX22091.1|3377982_3379107_-|2-hydroxyacid-dehydrogenase
MSDREPDDPADDIVSARGEIILYPTEDGRSRVECRFEGGTLWLSQGAMIALYQIDKSNVSRHLRAIFAEGELDEKAVVAYFATTGLDGKTYQVGHYHLDAVIAVGYRVRSARGTQFRQWATERLREYLVKGFTMDDERLKNPPGPGVPDHFDELLERIRDIRASERRVYLRVREIFALAADYRPGTPETVAFFQTMQNKLHFAATGKTAPELIQARADSTQPNMGLRTWKGQGVRKGDVTVAKNYLNEDEITELNRIVVMFLDYAEDQTRRRKQIYMHEWPKKLDAFLAFNERSVLPGPGKWKREDADAHAEREYERFAARRRAVLEQEAETEALKQLEEVARRLPKGTADAAAGPTSKRRANAASRPTSKKRS
>CP012670.1|AUX22090.1|3374722_3377974_-|restriction-endonuclease-subunit-R
MSGGPEYNQVELPFIDQLISLGWQYISGSVDHPTVTGRPSFRDILLEHDLRNALRRINLRNNKPWLDDARIAQAIGALTRIAAPRLIEANQAATALLLEGLPVDGLPDWDGGRQQTIHYIDWHEPKNNTFTVINQFRVDCPRGQAVPYIIPDLVLFINGIPVVVVECKSPTAPEAIPAAVDHLRRYQNERRAAGQVQENEGNERLFFTNQILVATCFDDARAGTLCADLEHYLAWKDTAPIPLADVARALHTADPAKLSLQQKLIAGMLRPDHLLDILRHFTLYQEVSGRTVKVVCRYQQFRAVHGAIHRLLHGKTRKQDGEHDQRGGIIWHTQGSGKSLTMVFLVRKLRSLPALRRFKVVVITDRKDLQRQLAGTAALTGETVKVARKVADLKKLLGKKGPGIVFAMIQKYAGRDDDNPAAQAAAAEEFEELNADESILVLVDEAHRSHTSTMHANLQKALPNAARIGFTGTPILMGAKKRTHEIFGPFIDRYRLRESEADGATVPILYEGRTASGAVSDGRDLDQLFEDMFVERTPEELEAIRRKYATKGNVLEAEKMIEAKARDMLRHYVEHILPSGLKAQIAAYSRLAAVRYAKALPAARDELVKEARALDPALRDLDAEALATRPRKLRAAVRAYQNLADLERLEFAAVISGVHNEDPMFREWTDEGKIEARIARFVKPLVHEDPEKADPLAFLVVKSMLLTGFDAPIEGVMYLDRPIREAELLQAIARVNRTGHGKQAGIIVDYYGVAQHLADALATYSAEDVEGALRNLRDEIPKLRDRHQRLLDFFKGHGVADISDTEACVQLLTNERLRAEFTVKLKQFLDTLDLVLPRPEGLPYLKDAKQLGLIYTEARKLLRGELPELAKSTGAKVRRLIDDHVISLGVDPKIAPIAITDAGFAAHVGKHVSPRAKASEMEHALRHHIRQNRDADPVHYQRLSERLEEILKAHGEDWEQLALALRSLAEEAERGRQKDDTGLDPQTEAPFFAVLKEERAKDRPVPPADARWLAGLAAQLVAHIRAEIRVVDFWKNTHAREVLRGAVFTFLDDHEIVPFEHADAVADRILELAKANHARLVKA
>CP012670.1|AUX22089.1|3374009_3374726_-|hypothetical-protein
MTALVVGDLELELRRSERRRSPEVTVERDGRLTLAAPAAASPEALTRFVQARRFRIYQQLAAREALPPAPPPRQFVDGAGFPYLGRSYRLLLVPDQDVPVKLLDGRFRMRRADAERRGVGGAAETAEAHMIRWYSAHARPWLAARVERYAGRIRVTPGGLTVRDLGYRWGSCGKGGRLYFHWKTILLPPRLIEYVVVHELVHLREPHHGAMFWQRVERVLPDWAERRGALRDAGRMIW
>CP012670.1|AUX22099.1|3388421_3389267_+|3-ketoacyl-ACP-reductase
MGLLDGKVAIITGAGGGIGREEALLFAREGAKIVVNDLGGARDGSGSSDAMAAQVAEEIRAAGGQAVPSFDSVATPEGAAGIVKTAVDAFGRVDILVNNAGIVRDKTLLKMDEGMWDAVIAVHLKGTFLCTQAAAKQMVGQGGGGRIVNTTSVSGMLGNFGQANYSAAKAGIYGLTRTAAIELQKQRITVNAIAPIARTRMTEDLPMFQSAGDTLTPAHVAPAALFLASDLCADRTGNVLAVAGAQMYIYKVVQSPGKFKDEGEIWTAQEIAEHWDAINKL
>CP012670.1|AUX22100.1|3389628_3391353_+|Putetive-hypothetical-protein
MSRDAHIPLALWICAAIVAHMAGGGGAVEVAQVIEDREQLRRMVDAVREGLRPGDMTFEVLTDDMAPTPPAVPVEPPERSPDDPAASEPDEDAPPEAKAKPEPARVAKAPPPQKPAPPKPKPEPPKEKVVKVVPVKPVPLSAERRIAVRQHVAKDQEDNPEASRIADDANTVAEETMAQIRSKDQDDPTPTPGTSKGPMGPKDRVGDSDHDLSAHSEERAGNDQHAPGERAPDSESAEHHSPASPVQAARPPTAGPPPSVPGARGGGHVAQAPPALPPPERGAAGGAGPASPEVVDGARGGYTLDPANPGGDGKSRVAGKKARPQPYQSPVRVGSLGLGAPGLPGGPNLNLNMAGVQAAVGDEKLRAERAADGASRRSAHRGSWETDKWKKWRAAIENYDPSVKPGNQTSLNAARVPFATYINMIHNRLHPIFADEFLMSLDSLPKGHAFNQNRVTHLEIVLNKDSGHVVRLGVTKPSGMTAFDIVALNSVSRASPFGKAPDAIVSPDGNVYLHWEFHRDPYDACSTRNARPFLLKAASGAAPVEPAPVRRAPRPVPGDEKSRTAPGPLRPLRR
>CP012670.1|AUX22101.1|3391397_3391901_+|hypothetical-protein
MPKDSTAAVQVTNARIEATLADSPAFARIEPQFYVVRQGTAYVYLHVLPWEPDRALVRLVAQLAHGVEMTPDLAMKLLRLNARIRFGAFGYVAQGSCVVIAHTLLGGETLDAEEILVALRDLSVLADEYDDRIVDEAGGKRMQDLINASAAAAIFTDLDAPRAWDKG
>CP012670.1|AUX22102.1|3391918_3393160_+|hypothetical-protein
MLLNIDLPSESVPPPAAPAPSASPPRGEGGAAPPAERRPSGAGRPPLAGLPVLRLIRPLAVLALLAMILGRMVAPATVGLAVGIERAARVVELAGAGASQLFAIGAVVVAMALIGAVLRSRIPHALRISAIVAGSFVILVVLQATAQRVPALSAALIGVSAAVLALGSAWEALRVPYMRPVAGALGLVGASAMVRLAGVFLALWANERGSKALAGATSSVATAAFALDALAVLVGTVALGASSEPRPRGAEAPRPAPRLASPLSIAALAAALLATRAALAGAGDDASMIETLFRRALDRLLTRPVPAAPLSMQLFAAALSVAVAALAVAAPPRLPALGGALALLLVARSAPEVPLGALSLVIAALCVALAARDERGFWAAVLATERERASGAPPAGKPDTAGPRQVGAGDDAR
>CP012670.1|AUX22103.1|3393190_3393427_+|uncharacterized-protein
MRGLVVVTDHPLFAVSGDDGSLTLEKAPHGESTPRRGTPVTTRRISSWRPTGLPRSRSRMLAPSPIPRRTRTKFQGMG
>CP012670.1|AUX22104.1|3393330_3393789_+|uncharacterized-protein
MAADRPAQVSLTHAGTEPHPTEDKDEVPGHGVRSPSASAAVGGTKPEAARLTGSAADRPFQVRSRPSAGRGAPRRLPQGDSCPKGRRATTDELDSPRRVVRASVPAQMLFIPAFRAPAVMLKSALAVSRAEARQDTGRAQGARAGYGSKVSA
>CP012670.1|AUX22105.1|3393791_3394790_+|protoheme-IX-farnesyltransferase
MSAEQATEQPPVPYVRQAEPSASDDGALPTSARPLLKVMADLVSLTKPRITRMVVATMLGGMWVASRYLRDGLAGEAAVDRAAVPATQLALALLGTVLVVSGANALNMYIERDTDRLMERTKNRPLAARRLAPEVGLWFGIAISAASIPLLFIAVNATTGALAALALLSYVLVYTPLKRRTTLALPIGAIPGAIPPLLGWTSVTGRIDAPGFMLFAVMFLWQIPHFLAISLFRRDEYRRAGLKVLPAEKGDRTTWLHIVGYLALLVLASVLFVPLGVAGPVYLGAALVLGGAFFALGACGLRAGVGDRWARKVFFASMLYLVLLFAALMVGA
>CP012670.1|AUX22106.1|3394840_3395554_+|lipoprotein
MVSIEPTRQANGAPLAAETAVASLPSRRGGRPRSRIEALARRPLFWIALVAVVALFSIGRAVLSRPPEPALRIPLPAFELTDHRGQRFGLEQLRGRVWIADFIFTTCPTVCPKLTQRMKEIEQRGRELGDALHLVTITVDPETDTPEVLASYAASQGLPLDRWTLLTGPLDQIESTVIKGFKIAMGKEEASPGLFSIFHGERLVLVDREGVIRGYYEANDEGISAILRDASALAERD
>CP012670.1|AUX22107.1|3395629_3400135_-|protein-kinase
MLEPSHLTPRLAERFRLLELAGAGGSAEVWRAADQERGGVVALKIERRGPTSGATEEQRVAARRALAREALHAALALSPRLPELVDVGWLAARAGRARVVEAPPGEEARAFVAMRWVEGQALAEVVRGLPAGERAAFALAVARDAGEALGDLHGIGLSHGDLKPENLILTPEGRIDVIDLGLAGSIHQTAVQGATLRYIARKDAELGDARARDLLALGALLAEIAFPDVAAAEDPIEAARAALASARAAGHPVAALCRALLSPCPTARPPSAWVTESARAALAGARQARAALADSPVGRAVLDPDAAGAERDRPDRDARRVRAAYLRLRRHELEEALGVRDDVATWLADALAMAQRARAIAGAEPREGGGAARAGAPRGDAPWLGRLGPDRVARWLTALVGTSAAAWPMAAIAAAPERAIADALVALARQIPPRAWTFADVEAAVLGSGARRGSAAAARRDPRAASPGGLGAAEAAELAIAIARVPPDPLAIEAIERRDDAPASLVVAAANALRLHGDLGRARSLMLRPCAQDAGEAGALAAEVLRRAGDRALAEERARAVIEAGADPEGRARAVLARVAIDAGALDAAEALAGEAVTAPLCEVRALLAVLRGDAARALAEVARGEALASSAEELARILAVRGYAWHASDPARAHASFSAAVDYAVRAGAVVEEATYRTGEAAAAVDLGDLDGAIATSTRAALLWEHLGRPAQGARALLACAAAYATAGLAHETCRIAEDAIARAREAGDTRAEAYALWAIADVAAARGDGASSAHAGAHPGAREAVSRAAALLAGGSAEDELRAAARLLRHGAGELTDARVEELDQLASGPDLPAAARLDWWGARAARALAALDEAAALDEAAALDEAAVLDAPAGAPRPTPQRGRAERVLAALAALAGARAPIAARGPALAAAHALAVRTGQTDVAHRLLAALAEAARELCLRNPEAGSAGASAASPRAPELAGAVRSLPWVARARALPESGLRPEQARDLELLVAALGERERLSTLLDRVVDALVLWTGVERGLLLLRAPNGRLVPRAARNLARSHLGAEQRELSETLARRALLAREPVVAVDAAGELPSVHRSVHALKLRSVLAVPLIARGEALGVVYLDDRVRRGAFGAQELRWARAIASVAALAISDAHAQVKLRRAARRAERASARLAEALARREAELDAAETELARARGGRDTRYRYDAIIGESEPVRAMLRLVDRVTAADVPVLLCGESGSGKELVARAIHQNGPRAARPFVSENCGAIPEGLLESALFGHVRGAFTGAERPRAGLFEVADQGTLFLDEIGEMSLAMQAKLLRVLEDGLVRPVGSERARRVDVRIIAATHRDLEALVRARAFREDLLYRLNIITIRVPPLRERATDVPLIVQHFIEKHGRAPIRVTRGAMERLMAYGWPGNVRQLENEIRRAIVLCDGTVERDHLSPEIAQGGGAAPREPGLNVRARIDALETELVRDALERTRGNQTQAAKLLGLSRFGLQKMIKRLAIDA
>CP012670.1|AUX22108.1|3400176_3400971_-|hypothetical-protein
MKRCGFGRMHLVVMTAAGLAAPLSGCGQSAPPGDGGEHAGAPGEAEIVTLFPDAAPLPGQTECKVVIRTGLTVSSAQHVSPCTPVQYATNPPSGGDHWAMWAAYKSYETPVPREIYVHSLEHGAIVLAYRCPPSGCAEVKALLEAVRAGAASDPRCLVSPGGPEARLVVTRDEALDTPVAAAAWGATYTATCLDEPSLARFVADHYAAGPEDTCSLLGAVDVDDPAGGAPSCGGAADGAATGGDATGATGGDAPGATGGGPAGP

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Crispr_ID: CP012670_23

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_23

3693312-3693413

Orphan

Consensus_repeat	Method
CGCGTCATCGCGGCTCGTGATGACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_23

>merge|CP012670|23|3693312-3693413|CRISPRCasFinder
CGCGTCATCGCGGCTCGTGATGACCAGGACGTCAGCTATTGGTCGGGAGTCGGGGGGCGATCCTCGGAGAGCGCGTCCGCGTCATCGAGGCTCGTGATGACC

>CP012670|23|21|3693312-3693413|CRISPRCasFinder
CGCGTCATCGCGGCTCGTGATGACC	AGGACGTCAGCTATTGGTCGGGAGTCGGGGGGCGATCCTCGGAGAGCGCGTC
CGCGTCATCGAGGCTCGTGATGACC

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX22326.1\|3703534_3706564_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237057
CP012670.1\|AUX22319.1\|3690444_3691563_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX22313.1\|3680665_3682936_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274542
CP012670.1\|AUX22330.1\|3711761_3712706_+\|polysaccharide-deacetylase	unknown	unknown	gnl\|CDD\|200565
CP012670.1\|AUX22325.1\|3701816_3703538_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX22322.1\|3694187_3698195_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
CP012670.1\|AUX22318.1\|3688289_3690389_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131323
CP012670.1\|AUX22311.1\|3677297_3678191_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX22321.1\|3693419_3694154_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|214922
CP012670.1\|AUX22312.1\|3678411_3680637_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274542
CP012670.1\|AUX22327.1\|3706681_3709408_+\|DNA-mismatch-repair-protein-MutS	unknown	unknown	gnl\|CDD\|235444
CP012670.1\|AUX22328.1\|3709656_3710532_+\|30S-ribosomal-protein-S2	unknown	unknown	gnl\|CDD\|235396
CP012670.1\|AUX22320.1\|3691686_3692922_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX22314.1\|3682952_3685748_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274542
CP012670.1\|AUX22317.1\|3687792_3688227_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX22329.1\|3710804_3711752_+\|elongation-factor-Ts	unknown	unknown	gnl\|CDD\|236491
CP012670.1\|AUX22323.1\|3698383_3699403_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368383
CP012670.1\|AUX22324.1\|3699907_3701215_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|223704
CP012670.1\|AUX22316.1\|3686394_3687711_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
CP012670.1\|AUX22315.1\|3685747_3686329_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX22326.1\|3703534_3706564_+\|hypothetical-protein	gnl\|CDD\|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	0.00633939
CP012670.1\|AUX22318.1\|3688289_3690389_+\|hypothetical-protein	gnl\|CDD\|131323	TIGR02270, hypothetical_protein_GSU3180, conserved hypothetical protein. Members are found in Myxococcus xanthus (six members), Geobacter sulfurreducens, and Pseudomonas aeruginosa; a short protein homologous to the N-terminal region is found in Mesorhizobium loti. All sequence are from Proteobacteria. The function is unknown. [Hypothetical proteins, Conserved].	1.48949e-12
CP012670.1\|AUX22313.1\|3680665_3682936_+\|hypothetical-protein	gnl\|CDD\|274542	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein. Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.	5.35733e-164
CP012670.1\|AUX22330.1\|3711761_3712706_+\|polysaccharide-deacetylase	gnl\|CDD\|200565	cd10940, CE4_PuuE_HpPgdA_like_1, Putative catalytic domain of uncharacterized bacterial polysaccharide deacetylases similar to bacterial PuuE allantoinases and Helicobacter pylori peptidoglycan deacetylase (HpPgdA). This family contains many uncharacterized bacterial polysaccharide deacetylases (DCAs) that show high sequence similarity to the catalytic domain of bacterial PuuE allantoinases and Helicobacter pylori peptidoglycan deacetylase (HpPgdA). PuuE allantoinase appears to be metal-independent and specifically catalyzes the hydrolysis of (S)-allantoin into allantoic acid. Different from PuuE allantoinase, HpPgdA has the ability to bind a metal ion at the active site and is responsible for a peptidoglycan modification that counteracts the host immune response. Both PuuE allantoinase and HpPgdA function as homotetramers. The monomer is composed of a 7-stranded barrel with detectable sequence similarity to the 6-stranded barrel NodB homology domain of DCA-like proteins in the CE4 superfamily, which removes N-linked or O-linked acetyl groups from cell wall polysaccharides. In contrast to typical NodB-like DCAs, PuuE allantoinase and HpPgdA do not exhibit a solvent-accessible polysaccharide binding groove and might only bind a small molecule at the active site.	1.60458e-98
CP012670.1\|AUX22322.1\|3694187_3698195_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	8.93031e-77
CP012670.1\|AUX22321.1\|3693419_3694154_-\|uncharacterized-protein	gnl\|CDD\|214922	smart00935, OmpH, Outer membrane protein (OmpH-like). This family includes outer membrane proteins such as OmpH among others. Skp (OmpH) has been characterized as a molecular chaperone that interacts with unfolded proteins as they emerge in the periplasm from the Sec translocation machinery.	2.37092e-26
CP012670.1\|AUX22312.1\|3678411_3680637_+\|hypothetical-protein	gnl\|CDD\|274542	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein. Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.	3.96308e-167
CP012670.1\|AUX22327.1\|3706681_3709408_+\|DNA-mismatch-repair-protein-MutS	gnl\|CDD\|235444	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional.	0
CP012670.1\|AUX22329.1\|3710804_3711752_+\|elongation-factor-Ts	gnl\|CDD\|236491	PRK09377, tsf, elongation factor Ts; Provisional.	2.33583e-101
CP012670.1\|AUX22314.1\|3682952_3685748_+\|hypothetical-protein	gnl\|CDD\|274542	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein. Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.	0
CP012670.1\|AUX22324.1\|3699907_3701215_-\|uncharacterized-protein	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	7.96381e-69
CP012670.1\|AUX22323.1\|3698383_3699403_-\|hypothetical-protein	gnl\|CDD\|368383	pfam05308, Mito_fiss_reg, Mitochondrial fission regulator. In eukaryotes, this family of proteins induces mitochondrial fission.	6.04999e-11
CP012670.1\|AUX22316.1\|3686394_3687711_-\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	2.92455e-07
CP012670.1\|AUX22328.1\|3709656_3710532_+\|30S-ribosomal-protein-S2	gnl\|CDD\|235396	PRK05299, rpsB, 30S ribosomal protein S2; Provisional.	2.41321e-159

>CP012670.1|AUX22320.1|3691686_3692922_-|uncharacterized-protein
MSAFLVGRGAHLAIWAGLGATGALAAPAACLYPDYTFDEPEPSASSGRGASGASTGGGGAGGEIGPGDGGSAGATEPEDCSNGVDDDDDNLVDCADPACGAFVCASAVPDGWIGYFALFDGDPAEDPGCPADFPSEQPFLGNRDPSAPPARCTCSCGPAEGQTCKELETVVITTGDAPCGSESYCVGTLETPGWKLDACTGPDGIYGGNRTCGPGGDCTEDTGVPCTVSVMASPLEATGGACAPNAVDVQRPSFRWTRLGRACAAAEPLGRGCNLGQVCAPRPPAPFESGLCIAKDGDSACPPGAYTEKHVFFTDHEDSRGCRDDCTCSAPSGGTCPTMITLYSDSPMHTCATPVATVPAGGCRDVAGNPAVVGRKATAPGPPSGGACAPSGGTPSGEVRGTRPRTFCCRG
>CP012670.1|AUX22319.1|3690444_3691563_+|uncharacterized-protein
MDRRRLRSSGRRIVAAAALGAALLAPRPAGAQTEAELEAARALFREGIALSAANNCAAALAKFQAVARVRRTPQVLFNIAECEARLGRLVSALGHFRLAAAAAAGDPGAQDVTANVGARIEDLELRIPRLAIRRGQGALTATILLDGSELGAAEMSADIPVDPGAHVITARIGDREAVRETVTLGERDARTVEVVIAEPPPDPRTAASPPDPRTAAPPGDPRTAAPPPALSADAPTPAAGPSRVPGLVALGAGLASGVVGGVFLGLRGGTLSELDALCGGDTSCPRSARPIADRGRLYTGIAEATIGLGVAGVAVGVALLAANGGAAAAPSADTGAARAAPRRSARGAGRRAELLLRAPGADVAGLSVAGRF
>CP012670.1|AUX22318.1|3688289_3690389_+|hypothetical-protein
MSSSYLPFVAPGGPAPQPAAPAGVDLPALERLESGHAALRRAALSLEQDVEPALDLTGCARALERAFGALYDAFDGRADRLRAVRAAMAEVDDAAVTIGEARALDASFAAVGEQLQHARGWLAHAEARLASAPPSPPPEPPSLLASRDRPRLHVIPRRSLVPTLKVPEPAPAELVAKPPPPIAPPRTFEELRAAVAALKEQAPAPGALPVAAGARPLEARREEPAAPPSPPGFAREIGAAIDDIAFLRARCRECFDEVAMVGMQRAPLLGDPFRGALVLERRMLAAIDVIAAIGEPAIEHVPRLVAEAPVKDPSLGFASAMVLGCFAGRDALAAAEHALLRGDRDRAFLDEVGAALKLVPHDHLPLALRGLLREPEPLLRAMAIDVLAYRGLATEDELVAAASDAAPVAARALHHLGCAPSPRLPELIQRALAAPEPELREAAWTAMALSDHPHAAITLRAAMEEQEGGDAAALLLALAGDEGDARHLAARAFEAPRRGLIVAVGWAGAASAVPQLIDLLERDVNGAVKLAAAYALERITGAGLWEEVAVEDEEIFVPDPPEPDVGEPRALKLAQIVSDPRDLPPPLAKETVEQPTVDAARWRAFYRERCQGWDPGARYRRGRPYTPEVVLDELDTGPVTPGERRQIQRELIVRTGRFVRFDPHDFVVVQEEAITAWRPIAARASGAPGRWARPRRRAG
>CP012670.1|AUX22317.1|3687792_3688227_-|hypothetical-protein
MKDPARDVEAFATLAAQLADPSADRAALLAEHGLDEERWEALDDAWQARFAEADEDDGDEVGVPPLVAAFAETFARVQRARARSALSFERFLEATRAMKRGTDMATVLSRLDLTLEDYLSAQQRWTAAMLEDEELMARFQRAMT
>CP012670.1|AUX22316.1|3686394_3687711_-|hypothetical-protein
MESEGNIRSITLEELAAISGALEAGVPRDEALAGAGLSAEAWEAARERWLSRLAARAARGQLGATRRYLALVAEQKRRVQAEAKEPRKEPEGPMPVAPSAHLSPLQGAGWDRAAAQPAASASGDAATRSPWARGSSAAALADTFVPPPLPPIEATPPQQPALVPGPPVMASRRNKTLVVMEAAMQAALPFKQDTPGASPAGAPTTPAAPGQAVTVAGVLSPFASGKALPFVRPSPPPADSALSFTRPGSSPPADSALPFARPSSSPPVDGALPFARPSPPPPVDGALPFARPSPPPPADSALPFARPSSPPAAPRPPLDEGVTSPGRRPERSWALPFQQPSADGAPSTDASASQPAAPARAGADAPTMRNVQRITLAQYARICASTRDYPEQLQQIQRHYGLTPQAWEALHATWHERFQRDPALKARWQALVERSARR
>CP012670.1|AUX22315.1|3685747_3686329_+|hypothetical-protein
MAASLDSGSSVAGASPALEEVEASAPAVEAPGTSRVTLDDVLDEHTAPSAAPLPARKAQPLGAAMRTARVASISGRAARILVRGAEGPIEAEVAPEVDPEVIADAHARGDAVLVELCEGAAPLIVGALTTQRPKALHLKAATITIEGEQELLLRSGRGAVRIREDGDIEVVGSRISAASRGLFRIVGRLLRLN
>CP012670.1|AUX22314.1|3682952_3685748_+|hypothetical-protein
MARETVAHFMIDEVPAARVLRFGCTHEAGRPLVLDVEVIVGMYAELDAMIGKRATLAFGAPGEAPRVVAGVVEAATAIGSTELGMDAAGTRYALRVVSPLALLARSVDSRIFQDKSVKEIVAEVLSEHGIDRVSWRLSGDLPRREYCVQYQESALAFISRLLEHEGIYSFVEVDADGELLVFDDDSTAAGPIAGDPALPLRRRTGLAAADERDAIYAIRERERVRSGKFVLRDYDFKRPKLDLTASAEAGERAELERYDYPGGYVEPEEGQRLAQIRLEEEQVERRTLEIDAVCPRLAVGQKLTIMDAGELDGEYFLFAVSHTYVQEGGGDQGAAARSRARARLVPADVKFRPRRATPIPVIEGPQTATVVAPAGSQPEAIHTDEHGRCKVKFHWDRSDVTDDKASCWMRVAQLQTSGSMMLPRIGWEVIVEFLEGDPDRPIVTGRLYNGVFMPPYALPEGKTRTAVRTASTPGGGGANEVRFEDKAGAEEIMVHAQHDMKMVAANNAKRTIGNNETTVVGNNASLEVGGNQTTKITKGSSNTVGADQSITVGGNRTVEVNAVSALTVGGDATTTVGGNQFEMDGNPLEAMLALAAQAAVQFASVMANNAISALQGQVDGAINQVMGPINALTQQVQGVSGAMRAVAGGDLSGMPAMIAGASGIPGAGQLAASMGGGGAGGGGAGGGGAGGGGAGGGGGAPGGSGPPNMLAAIASNAVHSSLAGRVFVEPSALAGALGLDSGGGGGESMANAAGPEGNVDGVDATDREKGPGHSTAKVGGTHKETVGSMKVVGAIQDIDNNVTGKKTIDVGAATVQLAFGSYAESVTGSKSEKATGLVVLSNAGESETITGSRTAMVGGAVVDKLKGSHVVQAVGPATFIGAFHKVEARGAIVFKCGASEVVIDGGGVTITSPMVAFLAPKIQLPKKVSEV
>CP012670.1|AUX22313.1|3680665_3682936_+|hypothetical-protein
MADHHLAAIPSVSVEGKTYQVLRFELDEQLSELTHLECDLLDDAAALPRPKDVLDRRAVFTLSRSDGGQTRAFAGTIVLAELLADGDDVPALRVVVAPALWGLGQRADCRIFQEMSAVDIVKQVLEGAGVPADQQDWRVTEPHPPRVYTAQYRETDLDFVRRLLAEEGIYFAIHTKDDSDVVVFGDAPTGLEDIEGRTTLPFFQDFGVEGAGDRVVRVSRAVSVKSDKVFVRDYDPEKPSLKLEASAEGSDPGPHALEIYEHPARAADVSAAERLARVLLDAVQAERDVVRGETGSLALLPGRRFSLENHPYDPLNQEYLVIRSRIAGSRPRSFEVSRGDVEDGARGHHFQCEFWGVPTGTTRYRPPRRARAQVIPGAQTAMTTGPAGQEIHTDASGQVKVSFHWDRSGKKDDTSSRWIRTSQVPTGGSMLLPRVGWEVTVRHAEGDADRPFVMGRLYNALTPPPYALPEGAAKSSLQTATTPGGGSSNELRMSDTKGSEEMFINASKDMTTEVKNNATESIGNDHKKKIGSDQTTNVTNSMTSSVGANQTLSVSGNQAMKVETFHVDDIGGDHALSIGGNRDLKVGGDHKRDVAGDSALDVSGNQIDLVVGAITDETLAAFQHEVGAALIELALGHRTVTVQGDRSETAAGAKVIAVKAGRGVQVGGAMNVKVGGAIVNVANGDRVESSLGTYTELAAGAQIVKANNVVFQADGALTLVMGASILSLTPASVAILGVSAKLDGDVSDAAALVIDN
>CP012670.1|AUX22312.1|3678411_3680637_+|hypothetical-protein
MPPTFATFSLEGEALPPDVSVARFDAVEGISLPYTVEVRFSTMAPSFRVEDCLRSRLCLRVLDNAGAQRLFDGVVDRASFAGLTGEIRHFEVRLRPALAALTHREGCRIFQEKTVVQVAQTVFEEAGFGDKVEWRNMKEYEPREFIVQYRESHLNFVSRLLEDNGLFYYFRHDASGHTMIITDDSASFEVEEGAPVLFRMAQGGIPGSVPLGKFSRTRALRASSVQLRDYDFENPVVKPESALPREEAWALPYFEYPGGFTKGSVGERRANARMRELAADADVCEGESHAAGLKVGEPFVVEGAAEPCLNGEFVVTHLVSRGNQTLTGGEQNVDVENHFRGIPKGAPFAAERRARRPRIRGIQTAVVTGSSTQEQAIHVDKYGRIKVRFFWDRQSQQDHTSSCWLRVSQVAMGGSMILPRVGWEVSVAFLDGDPDRPLVLGRTYNAEKTPPLSLPGAKASGTLKSMSSPGAGGHNEIGMSDSSGSQGFGIHAQKDLNVTIGHDKVEEVAVNEEQHISVNGSRSVKVDESISVAGDQSLDVGAVLSHKISGNQSVSIGGNDTSNATSNHVEKISGDRSYTVSGNQITISNGVTQSITGDMSRTVGAVHLAGSLGSINDNVLGGMAETVGAVKAQIINGSHGEQISANKDQTSAAAELHLTKGSLSHVAAGVTNLVGGLHYQKLDGDLVVQAPMITLLGAVGAFKGGGSELKLGGGPVVIKGSKIAIKSAMVVKMGASMKLGS
>CP012670.1|AUX22311.1|3677297_3678191_+|uncharacterized-protein
MVRQTRDLSALSALAQEQLERLGLRRLAEWTASPDELSRELSAMGWPCSEAVLSAEKAVGGLGHPPNGVFGIHASLRYLRGEVRWDRDDLQEYGLCADPRDPSRKVLPVWMIEDPRVWLALDGCVLYGSHIDGPEYFTLAFEDVCHYWETLALLDCHVVAFNRPHIVPRPRLESSCFVGEAIARELALTPFAPGTRGRTRAWAGPSAHVVELDIPGFKQGTDVVSDSADGIVLAAVQALDAGGAARITSPEALEADLLSELPVPTRQERPLAASHMYTWGKFLSYEDDRYRRRHRAS
>CP012670.1|AUX22321.1|3693419_3694154_-|uncharacterized-protein
MRNNLPERPFAPRSTFSNSARLADAGRGAALATGATTGRRLAARILPLLAAGMLGSAALLSSAPAAAQSKIAVVDVRRAMLETEEGLRVQATLKKLFDSRQVELDTKQRALATEREKLDKEAQAGKTPKDALQRRFETWQRQAAELQATMVDYQREMQRKESELTTPILQKVLGLLRRIAAQEGYDLILDKAAAPYYRADLELTDRAIQMYNSGQTGDAPPAKGAPPKGAPATPPKAPAPAPRK
>CP012670.1|AUX22322.1|3694187_3698195_-|protein-kinase
MLPEFTDPTDRFMIEARSRSGGMGDIFKGTDQTTGAPVAIKMLRASASPQERARFAREIAILADLRHPNIVQYIAHGTWLDGRPFFAMEWLDGEDLGQRQRRAPLGMRDSVEVVRRSAAAMAAIHARGVIHRDLKLSNIFLVRGKGTAIKLIDFGVVKLAVPDDYPTERGTIIGTPHFMAPEQARGEPVDARADVYSLGSVLFRLVTGRNVFETEHAIALLGRLVLEDPPRAQQIRFDVPEALDEVITRAIARDREERYENGGELARALARVGELGNDPPATERSASAIRRAVQEIKAAPPSSQSPERPQARLATSERRVVACVLFELGGGPLRPEVDAALREVLGDDARLEPLLSGTMVAVLGVERSRGDEAMRAARAALTVARSTPGARVSVAVGHAVRGRANLAGEAIERAAQQLESAVPGAVRIDAHATSALEGRFVVQEDARGGVLLHEDVAGFDARKLLGQPIPTVGRERELALLQGLFHEIAEDGVPRAALVTGPAGIGKSRVRAELLQRLDTAPHAPVILLCRGDPMSHASSLSGLGRALRALMSIHDGERLEDQIQKVNAHVAARLSRPLRFLAAFIGELVGVPFPDRGDEPLRAARESAQLMQSRMRMAIEAFFRSKSESTPQILFIEDLHWADGTTIELVDWLLGCADLRFGVFAFARPEIASRFPSLWEARNVTRLPLSPLSAEAADRLVSTALPQADPATRGAIVQRAGGYALFLEELIRHAAEGRDDVPLSVQALVQHRVDRMSKGGREVLRAASIFGPVFWTAGVEALLERAVGPELAELEAGEIIARQGASRIAGQAQWAFRQALVRDAAYASVLEEDRAALHLAAAAWLESAGDVDPGLIARHAEAGGERPRAALLYARAARAALSSGAELDAALDLATSGLACGAEGATRAALLVHRGQICELLGRIPEALDAAEEAARLALPGSDLWGEAQVLAVTSRIAAGESEEGDARAASALSPQFAAALSPSIRAMLLAARARGLLDLGRPADARRAAEAATVAARASGSSDAVLHAREAHVAALLHAGDLSAALAAGASLEEEAERARDVVVATKARLSTGAALNHLGLFEQAQATLERALQGARGRRLRALEGLALHHLGMACARLGDLEEGIAHERAASRIADECQLARLRIVSRLHEALFLVWRGAPGDYGTAYALARWLCEETSRHAAALQPLASFALARVQLARRELKAALDAAREAGRRLEGGPVDAWDASIRLALVEALLATGHDAEALSALDAALTAVAARVDAIRDRRHRDAFVRGSDEIGRLLSLARERLGRSLPAISPAAAPRGAGPTHGRDAHAEGAAAPAHEKGAPRS
>CP012670.1|AUX22323.1|3698383_3699403_-|hypothetical-protein
MLRMRYSEHPRAASCPGEAVLREQIQARTGYDPFREDAPEEVAVRVAPRGSELIISLAYSDDYGNVFTRREFNVPNSKAACAALTNYAALTIAFTLTPFGMDTPSPGAAPSPPAITPPPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPPRPKPASAPAEPWKPAQVGVGGLAGLGDAEEWFGGPSWLFRVRWPSGLSVSLEGRSLLFAGASAEPAGQGTEEGEASADGGAGAQARSTERLFAGALVPCIHARTLVFGCGVLGLGALQLSRPADSAPHASLLLATIGIRVGIELAPTDALSLYAHAEGLAAFAPAASTYRTPVETSTVTASLGAGLLAAF
>CP012670.1|AUX22324.1|3699907_3701215_-|uncharacterized-protein
MADLAAALVMGIALLGLIYWYFRSNNGDRARPRAAHAPSQGGSGAHALAEAEADFESSTSGSGSISPHDGLRAPAGESAHANITGGAGRSERISGADWRRPNGAPRREDDDGFDDDDDLTLITLAPPEVLQTPIKRPSAPSYGGEEEDEDDEDHEREEPSAVPIIYDDEAAIDEPTSSSPLLLISAVGQTDPGQKRKKNEDCYLCLDEHYLFAVADGMGGHAGGDVASRLAVDTIARAFKDQSFVDGDGASPYPDVPRRGSELAVAIQRANQAIYERAHADRSLSGMGTTLVSARFSPNKQRLYIGHVGDSRCYRLRDNELTQLTTDHTMGAAGITGPMANHLSRAIGISPAVKVDLIIARPHPGDVYLLCSDGLSKMATHEAIRDILLSEPDPEKASQALIEKANASGGRDNITVILVRVSDPKDLARLASRAG
>CP012670.1|AUX22325.1|3701816_3703538_+|hypothetical-protein
MKVARALLRTPRVLGAGLAALIVGGLGAAGCFVGSEGLSPPTEGFYFPTGLAASPGGRVLYVANSDFDLQYNGGTVQALDLQRLRKRTLALQESLNPREGGEAGADLRAACGSLGINAAGVLYPGPCGPLDVAALGGDEAIIRSSAVIGAFASNVVLVHRPLAEPAPDAAAAPQARLFVPVRGDPSITFFEVADDRPEAPAATRCGEGDACFRLDCGATTNGGRCSVDHRVGEIPSREIERRKLPLEPLGISAGPDGESLVVSHHTENKASLIVNPWTSVGRPQLADVLDDLPAGPTELAAVPPPRLVRALGEEAIDYQPAFLLTYVAAPQVDLLRAQASTDSEPALLFQSSSTPITAAARGVDSRGVAVDASERQACEAGCADADRDCLARCAEIPVQAFVAHRNPNALLVGELTTTLVEDDSGRPDDRWAAAYETLAIRDTAPLAAYPTRVAVGDVIGVDGARRRRVFALAFDSGHAFVYDPAARRIDAVIRTGRGPQAVAFDTGVTCGPEKERCDCTPGEDDGCEPYSLMYIAHFTDSYLGVVDLDMRKANTFGSMILTVGKPVPPRESQ
>CP012670.1|AUX22326.1|3703534_3706564_+|hypothetical-protein
MKLRAALLAPVLSLVGCAGEATPVEVEALAQSGRSAFLCLAIDRPDPEGPGVLRPLPITDCARRYAESPDDFEVDPEDEGRAKLPHLYALVTQTSRGEVAIVDLTTERSSILDLDPGTPGASFLPVGAQPVDIVATPGSTAAFVAVAEPGREGVFALPSARALPRDGCPVPSLSTWPSCSLGSPPGEMVLVSDPPGPDGKLRSSCSSDYDLDPEGAGEAGDGGACGEASGDLGREGLGRQKLIVTLPELGGLAVLDAQTLLEDERFRDGGFAPCEVERWVPLDVALPPAATPAVAPHGPECVEPATTAGAAQAISPPRPAGLALAGDRLFVADLDAPVIHVVDLPTPCEPVELPPLLPSSTLDPARLVTTSRIAVSQASPPDFRRFLYAVDAGDGSLMVFDVSDGATSRTPLARPHPEWNPFQPPDRIRFRAPVRDLEIVARDSPARLPATGVAPEGIRCDPDPGLRACDSTIASCDLETLYRTSADHDAGAGPRRLRGSFAYVVLTSGQVAVVDVDDLDAACRGPEVKSQLAGCEVAPLPGAPPDDHDADGIPNAPVLDPETGQVRVDGDDCPYYPNRREGDRRVDRNGDGIEDTCELRTSGEASCGVVLPHTPRSEDYILPSGGAGQREPGVQTLPLLYDRSGAIVQLSEERSPKMRATLPPEGVAAPDLTLGVGAERQPILRGQQGLVERSGELQHALVMNLEDPRVHIVNTGWTVTYEGALPGFSRTFVGFDGDESALGSSDARFCRRGVQSRASIEEQLLAAGLGEREASARAAQLADFVQITSELPDEDAAYWQASREPVCSYERCNAKYGSIITSRPGLRVAEAYEDHLVLESRDPDVDEVAFARCCFPGEVQLDVRAGGQWVVQDAGGGFLHHVIADPATGRCRNACDGRLARLNGRVVHTPTDGPVTDGEPGAFINPMFRFAITGGAPEQDMQFRFTTQGAFTPLHIELSEAIRRDDRYDVQPQAIRFIPATGELAITDGSLQGLILLSSSSMTLTHQFR
>CP012670.1|AUX22327.1|3706681_3709408_+|DNA-mismatch-repair-protein-MutS
MHPSEQPVARKKLTPVMRQYEEAKALHPDAILFFRLGDFYEMFNDDAVLVSRALNLTLTSRNKGEPGEHPMAGVPHHAAHGYIARLLALGHKVAICEQLGDPSKIKGLVPRQVVRVVTPGLVTETDQLDARANHYLAAVDGGGAPRGDAGATGGPYGLSLLDLSTGELSATSIPDAATLLAELARADPREALIARDLPDVRAAAASLACRAALRDDEDLDSAAVASILDDAAIEPISAAALAEHPLPAVRAAARALRFARRCSPGARIPVRRIAPHDTSGTLRIDETAQSHLELVRAADGGRRGTLLDVIDCTVTPGGARLLRRRLLTPLADVAAIRRRLDEVELFVAHPRARGELRDALGGVGDLERLSVRALLGEATPRDLGGLRDGLTAAPAAIAAIRSIPDLGGAPGRGEAPAAAEASAEPLLADAAATDVVADVCAELTAALVERPPPNAREGGIFREGYDKELDEARATEKNGTELILALEARLRAQTGAPSLRVKYTRVFGWYIEVTRAHVGKVPDTFRRKQTVATGERYTSDELDELADKIEHAGARALEREAALFERLRTLVARSEARLRALARRLAAWDVAAALADVAHRNDYVRPHVTAGDALAIRDGRHPVVERYAAAGHFVPNDTRLDLAGERLWLITGPNMAGKSTLMRQVALIVVLAQMGSYVPAREAEIGLVDRILSRVGASDNVARGESTFMVEMRETAEILRGATRRSLVILDEIGRGTSTYDGLAIAWAVAEHLFEAVGCRALFATHYHELTELSSRAPGIANYSVAAREHGDDVIFLHKLEPGPASRSYGVAVARLAGVPEGVLARARAILATLESGAALPGGKHASLRGRTRAGAAQLDLFVPAQAASPPEHAAVLETLRAVDVDRLAPLDALKLVVKLKGLLGAPK
>CP012670.1|AUX22328.1|3709656_3710532_+|30S-ribosomal-protein-S2
MTDTSVSASVPAAETMQAVAPLPGEFPLPLRSLLDAGVHFGHQTKRWNPKMRPFIYGARNGIHIIDLDQTTRLFKRAYDFLTDAVSRGGHVLFVGTKRQAQDIVQEEARRSGMYFVTNRWLGGTLTNFRTIKQGLDRLRTLERMREDGTYEQLLKKEVVRLEKERERLEKYLGGLKGMGGLPAAIFVIDPHQESIAISEARKLNVPVVAITDTNCDPDLVDFVIPGNDDAIRSIRLITARVADACIEGAQRRRDHGEGAHGSQPPPRGQRDEINVYQGGRGRGGPRQQQAS
>CP012670.1|AUX22329.1|3710804_3711752_+|elongation-factor-Ts
MAGINAQAIKELRERTQAGMSDCKSALTEAEGDMEKAVEIILKKGLAKSAKRAGASATEGEVRAAVAADRRSATMVEVNIQTDFAARNDAFRQFVGDVLAAAEKAPEGADVGQLSIGGKPVADVATELTARIGEKVAVRRWDRVSIPAGKHGVAHAYVHLGGKIGVLVAVETSSQAVAEHPEVQKLVEDTAMQAAAMSPLVLRRDEVTEELKAKQKEIFEAQLREDPKPKPEAAWPKIIEGKFNKWYSEVALLEQESVEAASRGVSLTIDKLREAAAKAAGGEVTLTRFVRYERGEGIAKKEDDFAAEVAKMAAS
>CP012670.1|AUX22330.1|3711761_3712706_+|polysaccharide-deacetylase
MRGRLAAVSIDLDEIPNYLAIHGLAVPERPGAAAALHAVYDAALPRIAAFAASHGIPVTLFAIGRDLARPESTAALRALSAAGHAVENHSYWHRYDLSRRPRAAIAEDVLMGAEAIAEAIGRRPTGFRAPGYTVSDALFDALDAVGVAFDSSVFPCPPYYAAKALAMGVQRAQGRGSAAILDTPRVLAAPRRPYRPGRPWHRRGGRRFVELPIQVTPRLRLPVIGTSVALAGAAGARWLARACAGEAFVNLELHGMDFLDRADGIEMLAPYQPELRVPLDRRLEALGAFVEEAARGGARFVRLEEASREGGLVA

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Crispr_ID: CP012670_24

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_24

4263290-4263411

Orphan

Consensus_repeat	Method
GAGCGTCACATCAACTCCAGATTCCGATGAGCGCAGCGCGCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_24

>merge|CP012670|24|4263290-4263411|CRISPRCasFinder
GAGCGTCACATCAACTCCAGATTCCGATGAGCGCAGCGCGCTTACCAGGCAAAGCGACATGGTGTGTTCTTGATGGCGCGAGCGTCACATCAACCCCAGATTCCGATGAGCGCAGCGCGCTT

>CP012670|24|22|4263290-4263411|CRISPRCasFinder
GAGCGTCACATCAACTCCAGATTCCGATGAGCGCAGCGCGCTT	ACCAGGCAAAGCGACATGGTGTGTTCTTGATGGCGC
GAGCGTCACATCAACCCCAGATTCCGATGAGCGCAGCGCGCTT

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX22732.1\|4259979_4260756_+\|protein-phosphatase	unknown	unknown	gnl\|CDD\|223704
CP012670.1\|AUX22728.1\|4249477_4253005_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276965
CP012670.1\|AUX22725.1\|4244177_4245173_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|253298
CP012670.1\|AUX22741.1\|4269274_4271791_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX22736.1\|4264334_4266194_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173842
CP012670.1\|AUX22738.1\|4266992_4267388_+\|glyoxalase-I	unknown	unknown	gnl\|CDD\|272886
CP012670.1\|AUX22726.1\|4245591_4247409_+\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
CP012670.1\|AUX22733.1\|4260922_4261705_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX22744.1\|4273503_4273932_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX22739.1\|4267566_4268481_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237000
CP012670.1\|AUX22737.1\|4266475_4266949_+\|transcription-elongation-factor-GreB	unknown	unknown	gnl\|CDD\|179345
CP012670.1\|AUX22740.1\|4268814_4269123_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225225
CP012670.1\|AUX22742.1\|4272257_4272866_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370550
CP012670.1\|AUX22729.1\|4253240_4256054_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|275366
CP012670.1\|AUX22727.1\|4247443_4249354_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|285503
CP012670.1\|AUX22734.1\|4261715_4263227_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240291
CP012670.1\|AUX22743.1\|4272955_4273573_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|239071
CP012670.1\|AUX22731.1\|4258353_4259865_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|277343
CP012670.1\|AUX22730.1\|4256327_4258130_+\|porin	unknown	unknown	gnl\|CDD\|143586
CP012670.1\|AUX22735.1\|4263591_4264074_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX22732.1\|4259979_4260756_+\|protein-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	3.37949e-66
CP012670.1\|AUX22728.1\|4249477_4253005_-\|hypothetical-protein	gnl\|CDD\|276965	sd00038, Kelch, Kelch repeat. Kelch repeats are 44 to 56 amino acids in length and form a four-stranded beta-sheet corresponding to a single blade of five to seven bladed beta propellers. The Kelch superfamily is a large evolutionary conserved protein family whose members are present throughout the cell and extracellularly, and have diverse activities. Kelch repeats are often in combination with other domains, like BTB and BACK or F-box domains.	4.65936e-17
CP012670.1\|AUX22725.1\|4244177_4245173_+\|uncharacterized-protein	gnl\|CDD\|253298	pfam05642, Sporozoite_P67, Sporozoite P67 surface antigen. This family consists of several Theileria P67 surface antigens. A stage specific surface antigen of Theileria parva, p67, is the basis for the development of an anti-sporozoite vaccine for the control of East Coast fever (ECF) in cattle. The antigen has been shown to contain five distinct linear peptide sequences recognized by sporozoite-neutralising murine monoclonal antibodies.	2.08457e-08
CP012670.1\|AUX22736.1\|4264334_4266194_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173842	cd01153, ACAD_fadE5, Putative acyl-CoA dehydrogenases similar to fadE5. Putative acyl-CoA dehydrogenase (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	1.66225e-157
CP012670.1\|AUX22738.1\|4266992_4267388_+\|glyoxalase-I	gnl\|CDD\|272886	TIGR00068, Lactoylglutathione_lyase, lactoylglutathione lyase. Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice. [Central intermediary metabolism, Amino sugars, Energy metabolism, Other].	4.88523e-76
CP012670.1\|AUX22726.1\|4245591_4247409_+\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.797e-93
CP012670.1\|AUX22739.1\|4267566_4268481_-\|hypothetical-protein	gnl\|CDD\|237000	PRK11855, PRK11855, dihydrolipoamide acetyltransferase; Reviewed.	0.00372725
CP012670.1\|AUX22737.1\|4266475_4266949_+\|transcription-elongation-factor-GreB	gnl\|CDD\|179345	PRK01885, greB, transcription elongation factor GreB; Reviewed.	3.00816e-76
CP012670.1\|AUX22740.1\|4268814_4269123_+\|hypothetical-protein	gnl\|CDD\|225225	COG2350, COG2350, Uncharacterized protein conserved in bacteria [Function unknown].	2.07984e-09
CP012670.1\|AUX22742.1\|4272257_4272866_+\|hypothetical-protein	gnl\|CDD\|370550	pfam09536, DUF2378, Protein of unknown function (DUF2378). This family consists of a set of at least 17 paralogous proteins in Myxococcus xanthus DK 1622 and and 12 in Stigmatella aurantiaca DW4/3-1. Members are about 200 amino acids in length. The function is unknown.	0.00477789
CP012670.1\|AUX22729.1\|4253240_4256054_+\|uncharacterized-protein	gnl\|CDD\|275366	sd00002, TSP3, Calcium-binding Thrombospondin type 3 (TSP3) repeat. TSP3 repeats of the vertebrate thrombospondin (TSP)-1,-2,-3,-4 and TSP-5/also known as COMP (cartilage oligomeric matrix protein), and related proteins. These short aspartate-rich repeats are a continuous series of calcium binding sites that can be divided into two sequence motifs: N-type and C-type. N-type and C-type motifs are distinguished by their sequence length, calcium ion binding, and their interactions with water molecules. C-type motifs are higher affinity binding sites compared to N-type motifs.	1.6891e-11
CP012670.1\|AUX22727.1\|4247443_4249354_+\|hypothetical-protein	gnl\|CDD\|285503	pfam08308, PEGA, PEGA domain. This domain is found in both archaea and bacteria and has similarity to S-layer (surface layer) proteins. It is named after the characteristic PEGA sequence motif found in this domain. The secondary structure of this domain is predicted to be beta-strands [Adindla et al. Comparative and Functional Genomics 2004; 5:2-16].	1.51636e-11
CP012670.1\|AUX22734.1\|4261715_4263227_-\|hypothetical-protein	gnl\|CDD\|240291	PTZ00146, PTZ00146, fibrillarin; Provisional.	1.9541e-05
CP012670.1\|AUX22743.1\|4272955_4273573_+\|uncharacterized-protein	gnl\|CDD\|239071	cd02253, DmpA, L-Aminopeptidase D-amidase/D-esterase (DmpA) family; DmpA catalyzes the release of N-terminal D and L amino acids from peptide susbtrates. DmpA is synthesized as a single polypeptide precursor, which is autocatalytically cleaved to the active heterodimeric form. The cleavage results in two polypeptide chains, with one chain containing an N-terminal nucleophile. This group represents one of the rare aminopeptidases that are not metalloenzymes. DmpA shows similarity in catalytic mechanism to N-terminal nucleophile (Ntn) hydrolases, which are enzymes that catalyze the cleavage of amide bonds through the nucleophilic attack of the side chain of an N-terminal serine, threonine, or cysteine.	4.97635e-59
CP012670.1\|AUX22731.1\|4258353_4259865_+\|hypothetical-protein	gnl\|CDD\|277343	cd07398, MPP_YbbF-LpxH, Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	0.00286956
CP012670.1\|AUX22730.1\|4256327_4258130_+\|porin	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	1.44898e-32

>CP012670.1|AUX22734.1|4261715_4263227_-|hypothetical-protein
MSMGIQLKIDVLAWAGFIAALTATTIGCGADDTFSDEGSACVPSANEERVDAQCGIWVSVKGDDGNAGSPGAPVRTITEAIDRAWPRGKRIYLCAQTFDEAVLVPGGYTLYGGLDCDHDWRWVGDRVKTTLTAPEGEVPLSVNGAVDYTTLEDLHVLARSIDPARTDLAGASSIAVITRAVPMIVKRSTLQAGDAAPGAPGEEVGSERALAGANGNVGNAACTASTVLGGAAVTNTCGTPDDRSDDSRSGSGGTGEITSGGDGDSGGPYGPSNDGAGETETAACTPGKQGAPGIDGIAGRGATGIGLFTLEGYLGIPGEDGTPGEPGQGGGGGGGAKGGAGALMCPFAASAGGAGGGSGGAGGCGGLGGRGGGAGGVSVAIAALSAWTSFEDVVLITGRGGDGGDGSPGQQGGNGGDGGDGGILGKAADLNAACRGGRGGNGGTGGHGGGGLGGHSIAIAYRIWEPSLDRVTITVGEAGIGGRGATAELNGGDGVKAEIYDIE
>CP012670.1|AUX22733.1|4260922_4261705_+|hypothetical-protein
MQRDDHRRAALRALQDGLRELERNEERRAAHRAIRAGWLRYMGPRYGNDICSMCGAPLERGTAYMHCAPCLATRGIDEQALRRACAAAMAGDWPFQERRLDERRWAYGLIAFWRDHVDPVESRAVPYRNNTLESAFYFMKQRLCEAGVAEVWTVPDESQRGLDPAMVVRARGEALAIGVATQRRIATAGEGLRSAHVSMFDEFLRLAGEQGGFLVVEKLSRRARRDAPVKEIPVITAGGRRVTQLRCMQEDRGWPADPLA
>CP012670.1|AUX22732.1|4259979_4260756_+|protein-phosphatase
MNRPLRIEAAGDSHVGCQREHNEDSFAVDLGLGLFLVADGIGGAAGGEIASRMAVDIVQSSCREGAIEGPLPEDEDDEAASPLGLRLVSSIWRANERIFEEGQRDPRLYGMGTTFAGVHADAGSACIAHVGDSRVYRYRQRRLERLTEDHSLWNEHLHNGEQLPDDLDPLLARNVVTRALGMGKTVEVATRFERPQAGDLLLICSDGLSGPVPEPQIAEVLARGDDLAAAARSLIDLANQHGGPDNVTCVLVRWSAAV
>CP012670.1|AUX22731.1|4258353_4259865_+|hypothetical-protein
MLHTVAISDIHLCELEPGDGLWMRYRQAPYSPDSEVAAMLDALRDEMKQGTARGAGRHELTLVLNGDVFDFDAPRVIDRKSVFHDLPRSAEHAVPAMRAMLADHPVFTEALGRVVADGHTVVFISGNHDVQLTLPEVRDLVRARVVDAALAALGGTPGEGAREALAARVVFRAWFHRTPDGILLEHGNQYDAYCSYRYPMLPFGRKPGEIQPTMGSLACRLLASRMGYFNPHVDSSFMLSAFGYLAHWARYYMFSRRSLALAWALGALRTVVELVRRREPERRARRRACLAAAARETGAPLRAVARHARLFARPAEDRLGLVARELWLDRAVFGLLAVAAALVWLLLAPSWLAPAALVAPAGLVAYERLVPKLPLDATWKRVSRAARQVARAHRARAVVFGHTHNPEGTWEGGLFFGNTGSWSAAFEDVACTKPVFASRPLVWLRSEPGSGSAARLSGGLVAWKNGRFEALTTSAPPAAGQRSEPQGSPHPPFQSPAAAALRT
>CP012670.1|AUX22730.1|4256327_4258130_+|porin
MTLASASRGQTTGGFSLDRFEPAPAGDAFFGVPSPAAPGHLAPRVHAMLDYAHRPIHSSGDSPIDLVSSQALLRLGASLALWDRLLLSLDAPLAVAQGGDDPGIPGVAFTELTAPELGDLRFGARLRVLGRDAGPLQLGIGGYLFAPTGTPAQYTGDEEPRGAFHASLGGRLGTARSSLGFLWSASGGVELGGGPNRPQQLTFGAAAGALLGGDLLQLGAEAYGAAPLGGDLLLSSTPVQREEAGLNAELLLGAKLRVLGGLTFGAAVGPGLTNAIGTPSVRAVGMIGWAPLPQPDSAERAPAVAAGDKDDDGIDDALDACPDVKGDPSPDPAMDGCPPADRDGDTVRDIDDACPTTPGARSADVTRSGCPDDRDGDGFHDGIDACLDVPGSSSDDPRKVGCPADADDDGIVDASDACPKVKGTASRDPKQNGCPDDPDGDGVRGAADACPNERGRPDPDPAQNGCPRFVRVHADEITTSKPVQFIVYGKTRAQTVAPISDDLLREVRDAIQQNPDIELVEVQGHTDDSGSEEYNLRLSQERAEAVLSWLVAAGVPREKLVARGYGFERPLGDNRVKTGRQKNRRVQFMIIKRKGAAVQR
>CP012670.1|AUX22729.1|4253240_4256054_+|uncharacterized-protein
MTFPASPSMPRRRAPAGPARRGLVPLLAGLLALVAPAPARAALWDVDNDQVANWVDNCPEIYNPSQYDGDGDELGDACDPDDDDDGTPDDLDSDDDNDSIPDVDDLCPTMPGGHRDGPEGDGDRDGDGVPDACDNCPGYSNEDQLDSDGDGQGNLCINDNDGDGDVDNRDNCINIPNEDQNDEDDDDIGDACDNCPEDRNDSQYDGDADGVGDACDRCLGIVNLGSDADGDQVDDACDNCIDADNEDQNDEDDDDIGDACDNCPDEPNDDQLNTDELLPGGDALGDACDDDDDADGAPDASDNCPLLPNPDQLNTDELLPGGDALGDACDDDDDDDGVPDASDNCPLHANPDQHNADGALSGGDLLGDACDDDDDADGVPDALDNCPLAPNADQQNTDAALPGGDAQGDRCDDDDDADGHPDGADNCPFAPNADQRNTDAALPGGDPVGDACDNDDDADGVPDALDNCVVTPNPDQANNTKSGPDDGLGDVCDDDDDNDTVLDAMDNCPYDVNTNQTNTDRDDELASGGVVEGDVCDLDDDNDGLTDDEEAALGTEPTSPDSDLDTIGDAEEVSNPSDPADPVNNTDGDAVIDANDRDSDGDGLFDVDEAGDALLSTPPIDTDGDGIPNYRDRDSDDDGVLDGDDNCPLVANPPSRPGEPQADTDGDGKGDLCDGDSDNDGVLDSEDNCPLTPNSPPAAGEPQADADGDGLGDVCDPDADPDGDGLSNQDDNCPTHANPPAQPGDPQADLDDDGLGDACDPDIDGDAVANADDTCPLVATDAQEDGDGDGLGDACDNCPGDANADQGDENGDGLGDACDDDGDGVANHIDNCRDVENADQSDDDDDGVGDACEEPETSGAGGASGAGGASGAGGAGGAGGADATTSASSGGGTRPDFQGGCDCRMGSVPVSSAPWGLVLILAAALRRRGRRDRPRAA
>CP012670.1|AUX22728.1|4249477_4253005_-|hypothetical-protein
MPRSGLRLRSAALLSACAVLPQTSGCSDESAPRRATPPAAAAPSAASPEARARIAAIRARFAGAVGPSAAGAVTPTPAGALRAAGPGAAASVELPPHAAGAVRLADSASRLAIAFSLPDASEVPAAVDGTLVLYAGALRAGDGSSRDVLHRVFPGGTEDFVVFEREPARKELRYRVDVSAVTGLRLVERTLEFLDAAGAPRLRVAPPYLVDATGARTPASLSVEGCAFDTSPRAPWGRPVTPPGAPACTVVVAWPSAGVRYPALVDPQWVSTANQMVEPRTRHTATLINPGDRASPVLIAGGFDASGNARATAELYFPLERTFAMTDAMDTARGAHTATALTTVPPPAPSPSPPPAPPVLVAGGSTSAGGAPVASLEIYDPATGEFVTDPNSLSPLPRFNHTATLIATGEVLLTGGVAPPLNQPTSTAFVYTFTDLGPGGGAPVTSALAGAGDMATARHAHAAVRLDTGDVLVAGGFVLSGAALSSAELFDHATRTFQPISATPPATARMTALRGFHAATLLDSGEVLLVGGTTRVSGGAHVGTVDIYHDGVTDPSKRGFELQPTPISMLGARANHTASLLPTGNVLVAGGFDGTSALSGVEIYDPIAKSFSDSGLPALLQGRLDHAAVLVNAGADIEAGRAVLVAGGVDPGSGQVLASAQLLLKANSESCASDQECASGRCSDRERVCCNEECADACSSCTLEGKEDGSATGTCGPAKRGTLLPVACLNEIEVHTQCDGAGRVIPHPDTKDCKPGRCGPDNVCVLYCLDDCDCSETGWCEVGTGDSDRCEAGGESAGAGGSGTGGAGGTSAGTGGSGAGGAGGSGIGGAGGSGTGGAGGSGTGGAGGSGIGGAGGSGIGGAAAGSGGAEASGTGGVTAGSGSASAGAGGAPPGSGLCLDRLGIGAECTRDRQCESGHCVDGVCCESRCDGQCQACDVENNVGKCTPVGTDLRPEPPHPNEGGTFRREACPGEGACAGYCGGDREARCMFPVDGAVARTSVCTCPDEGCAVGPATLTSYFCDGSGLEKAPVVERCGGLRCADESSCKASCASDEDCIADFICADGICVDLEEVGPTCDGEHTLRAAGADRDCTPYRCPPGGSACAAPCRSVADCVDGMVCNLDNECVPPLDPAEVPSCSCAVVGAPPERDAAPLAALLGAVAAVFGGLRRRRRGQ
>CP012670.1|AUX22727.1|4247443_4249354_+|hypothetical-protein
MDLRARRVGASPLPLARRRGAAARRLRALSAALALAIAAGPALAQPTPAGAGDAPETGAGDAPKTGAGDAPKTGAAEGAPGAGVEGAAPAEEAPVSEATRQEARLHFEKGLALLREGAWSPALAEFLLSRKLYPTRAATNNAAIALRKLQRYDEALEMFETFLRDFTMSAAERAVAQREIAELRTLVGTLDITSAEPGASIVVSGEDRGQYPPVKPIRVAAGAHVVRVFKEGFEPVETRVYVAGGQTVTVDAKLRRLTRSGRLRVVERTGKTVDVVVDNVVVGRTPWLGTLSVGDHMVALRGDGKLGTQPTAAPVRPQELTTLSLLAEDLDASLRVDPTPPGASVWINSVNVGNGVWLGRLRVGAHRVEVKADGFLPATRTVTLQKGQRQNLSVSLERDEDAEMWRKPPKITLDASASFLVAPTLGGEITSGCSGGCSSSLGLGGLGMIHGGYEFGSGLGLGVEAGVLFATQQIDERPAGLTPVGFRDPLRGTANDALRLTGFLAGATFGYHLGEAFPTLLRLGAGVLRGEVRDERTGRFETSAGEAFSTYPVVDFAPTTYFYAAPEARLGMRLGERWEASAGLKLLLLIGLSKPAWDRTIELAASTDGIGTYAPDALMGDFVLMVAPGASLRYQF
>CP012670.1|AUX22726.1|4245591_4247409_+|protein-kinase
MIGSIIDGKYQIRKLLGEGAMGSVYEAEHTATGRRCAVKVISSADLTRDPKVVSRFQREARAAGAIDTQHITQVLDAGVDRDSSLPFLAMEYLAGEDVHQLIKRVGPLSPDLALRIVAQSSLGLQKAHEASVVHRDIKPHNLFLAHRDAGEILVKLLDFGIAKVKMDRANETESADLTRTGNLIGSPLYMSPEQARGQKDIDHRTDIWSLGAVLYQALTGRTPYHHITALGELIIAICSEPPPPVQEFAPWVPPEIAAIVHRCLQQDQGRRYQTAQEMFNAIRPLLPYGWGIHESMLVPLHDSVRRQSAPRLSTSLPPANQSGGYAALASSPANQSGGYAALASSPANQSGGYAALASSPANQSGGYAALASSPELRGGGHPSVAPPASPGGAYGAVAPGGAHIGAATTGALTQSQRGAQPAASRVPVVAGAALLAVAVVGGVYAFSQRSPAPVPEPVGTQALAPAEPPKEPASPPPPVAPTATPSSEILPVAEAQPKRVHVVILPADASVEVEGERATTRDGILEISGLPGSVHRVRVFKGKSETLADVVVTETGALPPKVEIASTPSKAAPPPAARTAPAAPTPAPVPTTPKGIIDDTGEFGE
>CP012670.1|AUX22725.1|4244177_4245173_+|uncharacterized-protein
MISIHGKVMGLAMVMAALGTGCAVGAAEDADLEQAGLDEAEAVDSTAEALEEEALEANEELRGGLMGPSKGPLGPSKGPLGPSKGVLGPQAPIGAQGPMGQVGPLPGGAPVDQVGQLPGGAPVDQVGQLPGGAPVDQVGQLPGGAPVDQVGQLPIGQGPVGQAPIGQGPVGQAPIGQGPVGQAPIGQGPVGQGPVGGVPGVGVPGVGVPGVGVPGVGVPGIGAGLPGIGVGGLVGSRFGIGGFGCPPPFINIINNNFFFDDRFHHCFFPPPFDPCHRDDFFGFRDDCRDGSFGFRPPFRPPVCRPSFGAFSGLGWSGGGCGGCGGGWGGGC
>CP012670.1|AUX22735.1|4263591_4264074_+|hypothetical-protein
MDANLRDRVRELLEAGGGEPLEGGRFLPLVTLESGARVGLDSAGAWVFAPDGGAAQVFAPGRGQVFFEVLESRRDDFDAGIEAAARAAGLPAEEVAYSFPATDVVRAVLAKGLPTMTRLALSWLRLTEVRALRAEIAAVSRDPTMPAAIRDLAERLTVPE
>CP012670.1|AUX22736.1|4264334_4266194_-|acyl-CoA-dehydrogenase
MSNAQTHQNRYKADLREIRFLLFEQFRLHELLGNAPYDAWGRDEISMVVDEAYKFACEVCGPLNAVGDRIGCRIEGGQVKTPPGFKEAWDKLYEAGWKSVSVPPAYDGQGGPFTLYAVVEEFLSGANVAFNMYAGLSYGAAEVIEHFGTPRQRDIYLKRMYGGQWGGTMCLTEPHAGSDVGSSRTVAIKQADGRYLIRGTKIFISGGDQDLTENVVHLVLARVEGAPPGTKGLSLFIVPKIRVSDDGSLGEPNDVLVGNIEHKMGINGSSTCVLNFGESDGCLGELVGTVEHQGMPQMFRMMNGARISVGLQGVSVASSAYLNALEYAKDRKQGSSILQWKDPTAPRVPIIDHPDVRRMLLDMKSRVEGIRALIIKLARHQDAVAVHQGKDDRAAAYNQGQVDLLVPLVKAYSSDQAFRICETAIQTFGGAGYTKDYPVEQYCRDAKVFSIYEGTNHIQAMDLVGRKLGQAGGANLQAFLNDVAEFVKANEKHPVLAASVKELREAHEAVAGTAMRLLSWFQMGKMPMVPLAANRFLEMMSELAIGWLLLDGAVIALKAMEQLPAGDAGAKDRAFYEGKKHAALYFAANVLPHAKFSAELLGREDSSALDIPADAFATV
>CP012670.1|AUX22737.1|4266475_4266949_+|transcription-elongation-factor-GreB
MSDPAYITPSGARRLSEELARLRSVERPRIVQEVADAAAQGDRSENAEYIYGKKKLREIDRRMHFLTKRLEKAVVVDPSAQRGDKIFFGATVEIEDEDGGRHTYQIVGEDEIDSAVGRISWRSPVGRSLLGKRAGDVITVRRPAGETEMEIISVRYV
>CP012670.1|AUX22738.1|4266992_4267388_+|glyoxalase-I
MRILHTMLRVGDLERSIRFYRDVLGMQLLSRKDYPEGKFTLCFLGYGRNPEHAELELTHNWGVEEYELGTAYGHVALGVDDIRAACERIRAAGGKITREPGPMKHGTTVIAFVEDPDGYKVELIEESSRAR
>CP012670.1|AUX22739.1|4267566_4268481_-|hypothetical-protein
MARPPKAAPAPILPTSPAAALAAYGRVEPKLLELGPDDLVTVYVEVPKAVSSVLGALPHLREMRDEIVRDLPNHPIETLDELEDYALAAWYADLLYSTPANELDTKKLTEDAAGLREGLLVAAEALAYRDLLDKQRVADIRKGKGHTDLASDLIALAELFRGSWDKVRAKTAVEDVELDRAADLGVRLLAALAAKPGKGSSAAPKITDAADRRARAISLVARAYEECRRAVAYLRWHEGGDGDLAPSLLQKPRGRRPNAEKAAAAAAAASEAAAKPSADEAPAAADGALPPASPANDAGPVATA
>CP012670.1|AUX22740.1|4268814_4269123_+|hypothetical-protein
MYAIAIIRYRRPLDEVSTAVDEHRAYLKGLMDQGLLLASGPLDPRSGGALLLRVPDGAAAATLDRIRDGDPYTQRGLAQYELLPWVPVFGKEELDRVFAPKP
>CP012670.1|AUX22741.1|4269274_4271791_-|hypothetical-protein
MRPIRLLLTTAALSLCLVGAAASAGAAPVTGHPRLWLTADHLPRLRGWAADSGNRMYRDAMVPALQRAIAVYDSRFYPNGRPSPTWPDGGTNAYVQYPTEAYAEFFAFMSLIDPDVAARPEHAQRARNLLMVAIEEASKGRAEGEPFRDPGFATGDRSRWWGEGFPLTVDWIYRATDASGRPVLSAGDKAKIRQVFLRWADDNLRASRAGNEHPHPIGVMNDPALLADARKLRWAANNYYLGHLRQVTMMSLAMDDADDRPVDPSAPPEALGNTLRSYRANATGAWLYQAFAAFERPEIAAKRLGVPADGLGAASGGLPVEGLLYGGSLCALHQALLSLHTADYGAAALSGPQISLLHSGYWDRFTDGFLHSIAPSPVTYASMPDLGPVYEAANYGDTLRAWIEPRFIEAFGSLGVFDYLTGNKARLQKSRWIVANAFQGGAGELHARTSDIWGSPAPSRAILSFLLFDPAAPLPADPRPAMPTVFFERAPGRGSVLARTGWTRDARWFTWRCGWATINHQLGDCNQFELYRKGEWLTKEHTSYSNNLIGTTTEYHNTLSLQNDTPSRVRWFEKELVARGGQFREGRAAGDPTVRMSRGAGYVFAEGIATDLYNTRPNPWTPTDAARDIVHASRSIVWLEPDHVVVYDRATSRTAGRFKRFNLMTTAAPAVTGRTARVSTPRGQTLFLQSLLPRNASLRAVPVEDVDGRALMEPTTHRLVAEDPSHPADVRFLHVLQGADAGARMDAAAHVASDQGTSFEGALVAGTVVLFRAAPQPGAGSLAYRVPGATARHVITGLQPKAGYDVAAVAQGTAVEIRVSPGSARAADEAGVLAFRLP
>CP012670.1|AUX22742.1|4272257_4272866_+|hypothetical-protein
MPTTAAFAPFLGDPRIVGEGNLVKGTLISSRAQAMRQSYGARVVADLSRKLSPQAARHLTDPPLHSSWNDLAPLIEIDCALLNGLFGGRLERMRHFGAEVARNDLTTVYKTVSGSPSLLVKRIRLVYKMYFKYGDMSVTTVSDVSGTVTLSGGGLPFYMCSQGISGWIEAGLQLSGSRRIAVDHTACRHHGAPRCTWSIGWG
>CP012670.1|AUX22743.1|4272955_4273573_+|uncharacterized-protein
MGETGRAGGAPGPGASAGGRARARDLGVAPGIFDPGPLNAITDVAGVRVGHATVIEGDSVRTGVTAVFPHGGNVYLDRVPAALHVGNGFGKLVGSTQLRELGELETPILLTSTLSVFRAADALVAWMLEQPGMERVRSLNPVVGETNDGLLNAIRQRPITAERPARGDPRRGRGAGPAPPPRAYSETSDAVALGAGASARRLAAA
>CP012670.1|AUX22744.1|4273503_4273932_-|uncharacterized-protein
MVERELRGVDEGRRRFGEGHVARAHAPGSRGAPSGWASGDDSGLIDLNALRRAGEAEAEGPVMIPVPHIQVFPFGAPEETPRAAQAPAAAAPPPRRSSRMGNALPMMLGAALTLAAVGVGYAAASLRAEAPAPSATASLVSE

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Crispr_ID: CP012670_25

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_25

4412444-4412656

Orphan

Consensus_repeat	Method
GGCACCCTGGCCGCGCAGGAGGGCCTGCGGGGCTGCGCAGGA	CRISPRCasFinder

2 spacers

The CRISPR arrays of CP012670_25

>merge|CP012670|25|4412444-4412656|CRISPRCasFinder
GGCACCCTGGCCGCGCAGGAGGGCCTGCGGGGCTGCGCAGGACGGTGGCTGGCGTAGCGCAGGACACCAACGGGGGTGCGCAGGAAGGCACCCTGGCCGCGCAGGAGGGCCTGCGGGGCTGCGCAGGAGCCCTCCCGGGGCCGCACAGGAGGCCGCCGGGGCATGCAGGAGGGCCCATGGGCTGCGCAGGACGGCCGATGGCGCTGCGCAGGA

>CP012670|25|23|4412444-4412656|CRISPRCasFinder
GGCACCCTGGCCGCGCAGGAGGGCCTGCGGGGCTGCGCAGGA	CGGTGGCTGGCGTAGCGCAGGACACCAACGGGGGTGCGCAGGAA
GGCACCCTGGCCGCGCAGGAGGGCCTGCGGGGCTGCGCAGGA	GCCCTCCCGGGGCCGCACAGGAGGCCGCCGGGGCATGCAGGAG
GGCCCATGGGCTGCGCAGGACGGCCGATGGCGCTGCGCAGGA

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX22849.1\|4407278_4409600_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|350138
CP012670.1\|AUX22848.1\|4406597_4407095_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|379455
CP012670.1\|AUX22859.1\|4420412_4421831_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|376564
CP012670.1\|AUX22851.1\|4411663_4412038_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX22844.1\|4403063_4403435_+\|transposase	unknown	unknown	gnl\|CDD\|290319
CP012670.1\|AUX22845.1\|4403428_4404211_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|376573
CP012670.1\|AUX22854.1\|4413745_4414543_+\|hydrolase	unknown	unknown	gnl\|CDD\|223669
CP012670.1\|AUX22856.1\|4416066_4417821_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|334019
CP012670.1\|AUX22861.1\|4423611_4423839_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX22858.1\|4418564_4419761_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|274730
CP012670.1\|AUX22847.1\|4405500_4406484_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
CP012670.1\|AUX22850.1\|4409648_4411205_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350097
CP012670.1\|AUX22855.1\|4415357_4415924_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235740
CP012670.1\|AUX22846.1\|4404762_4405413_+\|glutathione-S-transferase	unknown	unknown	gnl\|CDD\|223698
CP012670.1\|AUX22862.1\|4424171_4425170_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368310
CP012670.1\|AUX22853.1\|4412896_4413505_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227169
CP012670.1\|AUX22860.1\|4421855_4423343_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|368509
CP012670.1\|AUX22857.1\|4417869_4418568_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX22842.1\|4402619_4402820_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX22843.1\|4402632_4403067_+\|transposase	unknown	unknown	gnl\|CDD\|379129

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX22849.1\|4407278_4409600_-\|uncharacterized-protein	gnl\|CDD\|350138	cd18817, GH43f_LbAraf43-like, Glycosyl hydrolase family 43 such as Lactobacillus brevis alpha-L-arabinofuranosidase LbAraf43. This glycosyl hydrolase family 43 (GH43) subgroup includes characterized enzymes with alpha-L-arabinofuranosidase (EC 3.2.1.55) activity. It belongs to the glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) which includes family 43 (GH43) and 62 (GH62) families. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. Characterized enzymes belonging to this subgroup include Lactobacillus brevis (LbAraf43) and Weissella sp (WAraf43) which show activity with similar catalytic efficiency on 1,5-alpha-L-arabinooligosaccharides with a degree of polymerization (DP) of 2-3; size is limited by an extended loop at the entrance to the active site. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	7.5698e-162
CP012670.1\|AUX22848.1\|4406597_4407095_+\|uncharacterized-protein	gnl\|CDD\|379455	pfam14079, DUF4260, Domain of unknown function (DUF4260). This family of integral membrane proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 114 and 126 amino acids in length. There is a conserved GLK sequence motif.	7.39601e-50
CP012670.1\|AUX22859.1\|4420412_4421831_+\|uncharacterized-protein	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	3.99408e-23
CP012670.1\|AUX22845.1\|4403428_4404211_+\|uncharacterized-protein	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	4.6642e-06
CP012670.1\|AUX22862.1\|4424171_4425170_+\|hypothetical-protein	gnl\|CDD\|368310	pfam05158, RNA_pol_Rpc34, RNA polymerase Rpc34 subunit. Subunit specific to RNA Pol III, the tRNA specific polymerase. The C34 subunit of yeast RNA Pol III is part of a subcomplex of three subunits which have no counterpart in the other two nuclear RNA polymerases. This subunit interacts with TFIIIB70 and is therefore participates in Pol III recruitment.	0.00517667
CP012670.1\|AUX22854.1\|4413745_4414543_+\|hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.93359e-31
CP012670.1\|AUX22856.1\|4416066_4417821_-\|hypothetical-protein	gnl\|CDD\|334019	pfam00339, Arrestin_N, Arrestin (or S-antigen), N-terminal domain. Ig-like beta-sandwich fold. Scop reports duplication with C-terminal domain.	2.48637e-07
CP012670.1\|AUX22858.1\|4418564_4419761_-\|uncharacterized-protein	gnl\|CDD\|274730	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain. This model represents a conserved unique core sequence shared by large numbers of proteins. It is occasional in the Archaea Methanosarcina barkeri) but common in bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats are abundant: an FG-GAP repeat (pfam01839) class, and an RHS repeat (pfam05593) or YD repeat (TIGR01643). This class includes secreted bacterial insecticidal toxins and intercellular signalling proteins such as the teneurins in animals. The other class consists of uncharacterized proteins shorter than 400 amino acids, where this core domain of about 75 amino acids tends to occur in the N-terminal half. Over twenty such proteins are found in Pseudomonas putida alone; little sequence similarity or repeat structure is found among these proteins outside the region modeled by this domain.	6.18271e-20
CP012670.1\|AUX22847.1\|4405500_4406484_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	2.27189e-33
CP012670.1\|AUX22850.1\|4409648_4411205_-\|hypothetical-protein	gnl\|CDD\|350097	cd08983, GH43_Bt3655-like, Glycosyl hydrolase family 43 protein such as Bacteroides thetaiotaomicron VPI-5482 arabinofuranosidase Bt3655. This glycosyl hydrolase family 43 (GH43)-like family includes the characterized arabinofuranosidases (EC 3.2.1.55): Bacteroides thetaiotaomicron VPI-5482 (Bt3655;BT_3655) and Penicillium chrysogenum 31B Abf43B, as well as Bifidobacterium adolescentis ATCC 15703 beta-xylosidase (EC 3.2.1.37) BAD_1527. It belongs to the glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) which includes family 43 (GH43) and 62 (GH62) families. GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	8.45605e-74
CP012670.1\|AUX22855.1\|4415357_4415924_+\|hypothetical-protein	gnl\|CDD\|235740	PRK06203, aroB, 3-dehydroquinate synthase; Reviewed.	0.000575499
CP012670.1\|AUX22846.1\|4404762_4405413_+\|glutathione-S-transferase	gnl\|CDD\|223698	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	2.53505e-22
CP012670.1\|AUX22853.1\|4412896_4413505_+\|hypothetical-protein	gnl\|CDD\|227169	COG4832, COG4832, Uncharacterized conserved protein [Function unknown].	1.02597e-68
CP012670.1\|AUX22860.1\|4421855_4423343_-\|uncharacterized-protein	gnl\|CDD\|368509	pfam05593, RHS_repeat, RHS Repeat. RHS proteins contain extended repeat regions. These repeats often appear to be involved in ligand binding. Note that this model may not find all the repeats in a protein and that it covers two RHS repeats. The 3D structure of an RHS-repeat-containing protein (the B and C components of an ABC toxin complex) has been determined. The RHS repeats form an extended strip of beta-sheet that spirals around to form a hollow shell, encapsulating the variable C-terminal domain.	1.42644e-06
CP012670.1\|AUX22844.1\|4403063_4403435_+\|transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	4.71708e-07
CP012670.1\|AUX22843.1\|4402632_4403067_+\|transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	2.52113e-29

>CP012670.1|AUX22851.1|4411663_4412038_+|uncharacterized-protein
MVFGDRLDFAIEADVEPNLAPPSAVWGRHRGDVEAPDARTAEEHRRDSTFWSAHDFLTGWGEQFNGCKAFILCPPDGAVRILSRELPGPMGRGVEVSRAGLVAAIEGFTRWFEQQARRLGGGRA
>CP012670.1|AUX22850.1|4409648_4411205_-|hypothetical-protein
MARLKSSSKARWVVALSWISGCSDPVTATGGDAGPDAEPPACSEGTWDHDGDGETSCVAWTACTAGTFASAEGSPTADRRCTACPEDTFSDTVNAPSCAKHAPCAPGTRQTAPGTSATPAQCDACPPGTYCAGGTAALVDCADGTWDDDADPATACVAWTDCVPGEFVGAEGSSATDRICLECTNGEHTATMNATRCSPGAWVLSYFGPHQDVPSDSLHLAYSTDGLHWSTLADGQPVYRLTGMGTNHIRDPFLFRKNDGTYVYIATDWTLAENDADYWNRPSSKIFVADSTDLITFTNPRLITLTSLPGPSSTPMHAWAPEAYYDPDRELYAIIWSGNDTTGANRIYVSYTEDFVTIVNPTPDVLFDPGYSVIDATITQWNGRNYLFFKDETDSSGSALTGSGKDIQIARSPTLALDPATFTRWSPDYITRGSTQSRRRATEGPFVIKDPRQSRWYLFADYYLNGGVFGCWSTTDLDTDPGSWTELPSAEYSFPSGVRHANAVRVTQAELDAIIAHY
>CP012670.1|AUX22849.1|4407278_4409600_-|uncharacterized-protein
MCAPRSPHPECTSLSAPCVALTAAACALSALLGVVGCSDGPSTDAPDASTGSPSNSLRITTAGTALGTSESGGRVTVSVALDAAPSGPVTVPVSSSDATEGSVSPTTVSFTAEDWSAPREITVTGVDDAERDGDQIFRVRFGPSVSVDPACDGLVAASADITNTDDDGPGTAAIVVSDPSGTLAERGAPVTFTVRLASQPSAPVTIALGVSDTTEATLSHADLTFTEASWSAAQTVTLSSVDDWQADGAQPVRVSFGSPASEDPAYAALAAPADLELSNLDDDVGGGYHIRTTRMEGAPLYVAHSYYHAMITNLDDRANNQIPADFQWRVVPGLANPDDPTLVSFESVGLGGRYLHVDSASSTRYPPQSEASNRADGLWQTPSNERSHLLWIDVFTDTTTFRRDATFRIVPALNGDPTMVSLQWYSDATRHLRHLNYQIHAHVLDGTASEGSEASFALEPLGYLISQRADPHIQRHTDGYYYFTASVPTYDRIEIRRATTIRGLADATPKVVWTKHATGPMAAHIWAPELHFIDGKWYIYFAAGSSTDIWAIRMYALESASGDPMDGTWTERGQIVTEADTFALDATTFEHDGKRYLVWAQEDPSVAGDNSSLFIAAMVNPWTLASPNVRIARPEHAWETAGFAVNEGAAVLERNGRVFISYSASATDDRYCLGLLTASATDDLLSPRSWTKNENPVFVSANGLYGPGHNSFTTSADGSLDVLVYHARNYTKITGDPLYDPNRHTRVQRLEWNADGTPSFGVPLLDGASTIGD
>CP012670.1|AUX22848.1|4406597_4407095_+|uncharacterized-protein
MTTAATLPALDLAPPPRRPAPQPTCEVPAGGARGMPRALLRLEGALVLGAALLAYAHLGGSWGWFAALFLLPDLSLLGYLAGPRVGAVAYNAGHSHLAPALLAAASVALGSPALLLGAAIWVGHIGFDRMLGYGLKYGTAFGDTHLGRVGAKRSSEQRWFQRSPS
>CP012670.1|AUX22847.1|4405500_4406484_-|LysR-family-transcriptional-regulator
MSPAEPSWDLYGAFLAVMRTGSLSAAARALDVAQPTVRRQIEQLESQLGVVLFTRAPNGLVPTELALATLPYAESIAASARALVRAVSSPTEADRGTVRVTCSEVVGVEVLPPMLAALRVAHPRLQIELVATNRTEDLLRRDADVAVRMAEPTQAGLVRRCAGRVELGLFATKAYLAAHPAPTSLAGLVPDHALIGADGSRAIIDALAAAGLVTTPRDYAFRSDSDIAKLAAVRAGLGIGVCQLPLSRRPVPLVRVLPALAFHLDVWVVMHEDLRAVRRVRLVFEHLVAQLGAHATQARATRPLAAKARPPGTRRRPSSGRAARTPS
>CP012670.1|AUX22846.1|4404762_4405413_+|glutathione-S-transferase
MSELTIWTYDWVPEGPRGFVRDLRLRWACEEADLAYAVQTIPFDDRETNHLARQPFGQVPFLSDGELEIFESGAGLLHLARKSDKLMPPDPAGEAETLQWTIAALNSIEMVTVPWWFLKICGDNDNKLTGWMGKRLDQLEKVLRDREWLAADRFTVADLLMADVLRVSEVRAFGDRPATEAYVTRVTARPSFKKARADQIALFKAADEKRKEKGSG
>CP012670.1|AUX22845.1|4403428_4404211_+|uncharacterized-protein
MLGALIWRTVKKSSLAGKRNAYEDEVIERLHEILPKATRVTLLADRGFGDQERYAHLGNLGWDYIIRFRECIIVTDADDTARPAGEWLTSTGRAKMLKNVRVTQDKTAIAAVVLVHDKRMKEPWCLATSRADLTASQVTKLYGRRFCIEETFRDVKNVHFGMGLSATHIGDTARRDRLLLIAAFAHVLLTLLGEAGERAGLDRLLKTNTVKHRTLSLYNQGCYWYTAIPNMREERLVQLMTAYGEVLREHAVTREILGTI
>CP012670.1|AUX22844.1|4403063_4403435_+|transposase
MTPANVHDSKMFTPMVDAVPTIARPCGRPRRRPKKLHADKAYDDPALRLACHLRHIVPRIARKGIESSEKLGRYRWVVERTIAWLRRFRRLTVRYERRADIHRAFLQLAVCLICLCHIQAGFC
>CP012670.1|AUX22843.1|4402632_4403067_+|transposase
MGKLLVPDELWERIEPLLPKAEPKPQGGRPRTPDRIALTGILFVLKTGIPWEYLPQELGCSGMTCWRRLRDWQQAGVWGQLHKALLDELGGADKINWERAALDASLVPAKRGVKRLARTPQIAAGRARNITFWSIRMVSRSPSR
>CP012670.1|AUX22842.1|4402619_4402820_-|uncharacterized-protein
MPLQPSSCGRYSQGIPVFSTNKIPVRAIRSGVRGRPPCGFGSAFGNRGSIRSQSSSGTNSLPTRAI
>CP012670.1|AUX22853.1|4412896_4413505_+|hypothetical-protein
MSKVDLKRELKHLYQASAKEVVRVDVPTFQFLMIDGEGDPNTSQAYAEAVEALFSVSYTTKFMVKKGARGVDYAVMPLEGLWWSDDLSVFTSNDRSRWKWTMMIMQPHFVEEAVIRAALAEVRRKKALPAVDALRLESFTEGACAQILHVGPFTEEGPTIQRVHDFIGARAALAGKHHEVYLSDIRRADPAKWKTIIRQPME
>CP012670.1|AUX22854.1|4413745_4414543_+|hydrolase
MTTWISGVCEANGISIHYLRAGGARCPVVLLHGLMGSGACWTPLARALEGEFDVVMPDARGHGGSSAPHHGYRYDDHASDVVGLIRGLELARPVLLGHSMGGMTAAVVASRGAGVIRGLVLVDPTFLSPERQREVRDSDVAEQHRQALGSTKSDLVAQARARHPRRSPEIVALQAEARLKTRMAAFDVLTPPSPAYRDVVSAIDVPILLVIGDSSPVVTLEMATELRSLNPRVRIEQVQDAGHGLPFQQPERLGEVVLSFLRELA
>CP012670.1|AUX22855.1|4415357_4415924_+|hypothetical-protein
MKHICHMTPMRALICSLIAGGISLGAPAQAQALEYGIYEGEGCPAGYTPLTTADAFWTFFASCDELPYSGVFRLADGDSIDGQWNSCQLNTGDTRELDYTLCKPNYELFDIDGTTFAVVRGGEECLEGFEHVDFATASAYSAEICTHVGYWGIARIGGGGSIDGVGYGCGIRATDSRPLGDAICVESE
>CP012670.1|AUX22856.1|4416066_4417821_-|hypothetical-protein
MRSRPFITLRLPEVVHPGETLGVELLLESTSETPIDFVRVTLQCTQTLWDPSRGVIAGARDRLRRSEEVAGRGLLAAGVHRYRASFALPRDLPPTHPGAIAELRCGIRARVSIPWWLDAEESREILVRPATTARPRRAPITSASARGRGAFLEVSLPDRAFAPGEVLAGAVAFGGLAGSRPRALDVSLVGVERVQVRGRRPSSELHRLSFFQDLGAVREGREVPFRIAVPIDLAPAWSSADVSLSYALEAVLEHSEGRVVHRVPVIVGPFGQRRRHEGARPRVGADRWRAVWARAGQRAGYTAREEAEGLGLRGVRAGCVVDVAPAEERSGPGLGATVWFGEPWGLGLKVRPRQGGARVGVITGDARFDRRFRAWGREDAQVLAALTPALRAALGAFGEVDVDDARVRAWSALGVSDERVLGGFLEQVEALAQAIADAGAALPPPSAMAAWLPAWRRFAEESGGALQVGSMRLSGTFEGERIELRTRFKGAAPAGTRIALRLEPLVRGGACAPSAALGPIVAAILEQAARLGAVAGNTVVVEPGEIAVRITALLADPAAAREVLRSMLALAREMRGERRGGPYR
>CP012670.1|AUX22857.1|4417869_4418568_-|uncharacterized-protein
MIDEAKIEREGGSIERALFLLSLDCVRPHYEKMGLRLTSEEQFQSAVRSCTAERDWSVNTREAPYRVTVAALECLRARAPELAGALLGWVTSALGGAGYWRTWMSVLRVQPRAGGLFGLAEGAREALWRAFDAAERASEDVPSLDPAELSEFDHRALSERGYLEDEIDPMDTVQELAEAHTFARCWCDTVAPLLSEDERRALVAAAVGFLRGQGRDEEADVLVSGATARPSG
>CP012670.1|AUX22858.1|4418564_4419761_-|uncharacterized-protein
MGQLLAAVPEKARAEVFRFDAAGNLHEAEPESREYTRGNRLARKGRLEFTWDREGRLIERRERRADGEVAVTRYEWNGAGLLKSVTLPDGNIVDFAYDPFARRLWKRVRRAAAAGAPLEVTRFVRYIWDQDVLVHEVHEEARGSTAVVVEERTYAFSDDLFVPLAQKRGAWKHFLNDPIGTPVALVGADGGSVESVDRRVWGAPAAADRDRATRVGFPGQLDDDETGLAYNRFRYYDPDTGNYISGDPLRLNSGIRFYRYVANPTSCADPLGLVNLRALSDAQLMSRIDDFIDRDKRALGGGGTHGLSHRFREQIHGANGPGTPSWQNHEDQITGQQSGLRKCIAEYDRRVAGGTGMPPLRPDARPWSTKPPPAASDWVGPTPPPPPTGGGSGGGGTP
>CP012670.1|AUX22859.1|4420412_4421831_+|uncharacterized-protein
MTVVGLDVHKRVVEAVVLRAEDGRILHRERFECTREELVRFATKRLGPNARVALEATTNTWSIVELLRPYTGELVVSNPMRTRAIAEAKVKTDKVDALVLAQLLRADFLPRVWQPDGMTQARRRLTARRASLVSDRTRVKNRIHAVLHQRLMEPPVSDLFGTKGMRWLQMLELDAAGRLAIDSELRLLRQIEIEMTAVDEALAQDGYDDPRVRLLMTLPGVDVAVAQTLLATLGDIQRFKDPDAAASYMGLVPSTRQSAEHCYHGPITKQGKGQARWMLVQAAQHLSAHPGPLGVFFRRLAKKKNRNVAVVATARKLVTIAWHMLKNNEPYRYAIPRSTETKLSRMRVKATGERLRPGLPKGQPRPKAYGSGVRTRTVPALDTIYEREGLPPIAPLSDGELRMLRQQKVLKHVAQTSRPQRLPRRAAAPEPPDVPGAVSPRCPGPRPSAGRAPAAPRRAKSTQTPSPGRRLM
>CP012670.1|AUX22860.1|4421855_4423343_-|uncharacterized-protein
MARTAPVPNIPAIPGMNPGTFILGGGGAGGGGGGAGGGGSGDGQGGNGGNGGNGAKGGGKQAPDPKKYPTCGTKSHPVDVVTGRAFTHPIVDFELPGPLPLRFARTCSSTIHREDAGLGWGWAHTFGWRIEVQRQRVRVWNESGTALDFPVPHAGETAIGPWGWILRRDGERSFSLDADDGGVWRFFEPSNDAATQYRLSVIADRNRNRIQLLYADGRLTKINDAAGRTIHVLSTHDGRIAAFLVKNAAARGRWIELARYSYDARGCLIEATDPDGHAWRYEYDDDRRLTKDTDRTGLTFHFLYDRQGRCVESWGAYDARPDPSLAPDLPPYLHDRETRAKGIHHCRFHWYPDGYSEVVDSTQVSRFFGNSRGTIDKSCEGPGVWSYAYDEHGFQTRSVDPEGGTTHYERDRRGRLLRLTDALGRAMIIERDAEGLPVCITDPEGGNTRLWRDRFGNVEGVQDASGATTMYTRDERGLVTAVHHANGATSRFEYL
>CP012670.1|AUX22861.1|4423611_4423839_-|uncharacterized-protein
MRSRPFITLRLPEVVHPGETLGVELLLESTSETPIDFVLALSSGRAIASAHRPDRLFRPVNAYPCGSGPARHRGG
>CP012670.1|AUX22862.1|4424171_4425170_+|hypothetical-protein
MTVELIQAIVRQTTVLIAQLATSGGLRAPLAQLADQVFQDLATELERQGVSRKVSADMFGMGLRSYQRRVRRNAEGSVERRRSLWEAVLAHIRRRGITPRAELLRAFASEDEVLLRGVLFDLCESRLIFQAGQGAQVVYRAVSDDELGALRALRSGEGVDELVWAIIYREGPLTRDELLQRTQIERAELDGALGRLLESTRVERTGDGAGATYSAASLYVLLGSPVGWEAAIFDHYQAMVKTILCRLREGRGAPGLADRVGGSTYTLDVWPGHPYEQQAYETLGRLRAQLVELREQVEAYNAAHEAPDRYTQVVQYVGQCLIQQDTGSGDED

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Crispr_ID: CP012670_28

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_28

4814657-4814754

Orphan

Consensus_repeat	Method
ACGACG----GCACGTCGTCTG	PILER-CR

2 spacers

The CRISPR arrays of CP012670_28

>merge|CP012670|28|4814657-4814754|PILER-CR
CGGCACGTCGTCTGCAAATGCAGACGACTGCGACGACTGCGACGACGGCACGTCGTCTGCATCGCCTGCAAACGATGCAAACGACGGCACGTCGTCCG

>CP012670|28|9|4814657-4814754|PILER-CR
CGGCACGTCGTCTGCAAA	TGCAGACGACTGCGACGACTGCGACGA
CGGCACGTCGTCTGCATC	GCCTGCAAACGATGCAAACGA
CGGCACGTCGTCCG

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX23173.1\|4815128_4815959_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX23176.1\|4819912_4820467_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX23162.1\|4799644_4800892_-\|adenine-glycosylase	unknown	unknown	gnl\|CDD\|224115
CP012670.1\|AUX23168.1\|4806716_4809248_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX23164.1\|4801945_4802452_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX23178.1\|4821462_4822122_-\|fatty-acid-hydroxylase	unknown	unknown	gnl\|CDD\|178053
CP012670.1\|AUX23163.1\|4800962_4801865_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX23166.1\|4802996_4804238_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378342
CP012670.1\|AUX23174.1\|4816257_4817586_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|270916
CP012670.1\|AUX23170.1\|4811221_4812304_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
CP012670.1\|AUX23169.1\|4809461_4810994_+\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
CP012670.1\|AUX23179.1\|4822242_4823391_-\|alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|341483
CP012670.1\|AUX23181.1\|4824836_4825502_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX23175.1\|4818002_4819451_-\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|240533
CP012670.1\|AUX23172.1\|4814904_4815165_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225170
CP012670.1\|AUX23167.1\|4804423_4806712_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|237425
CP012670.1\|AUX23177.1\|4820764_4821073_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX23180.1\|4823393_4824755_-\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
CP012670.1\|AUX23165.1\|4802448_4802931_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX23171.1\|4812517_4814434_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|270916

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX23178.1\|4821462_4822122_-\|fatty-acid-hydroxylase	gnl\|CDD\|178053	PLN02434, PLN02434, fatty acid hydroxylase.	2.1656e-43
CP012670.1\|AUX23162.1\|4799644_4800892_-\|adenine-glycosylase	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	5.91965e-119
CP012670.1\|AUX23174.1\|4816257_4817586_-\|uncharacterized-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.96312e-78
CP012670.1\|AUX23170.1\|4811221_4812304_-\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	0.000595007
CP012670.1\|AUX23175.1\|4818002_4819451_-\|polysaccharide-biosynthesis-protein	gnl\|CDD\|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	5.76484e-54
CP012670.1\|AUX23166.1\|4802996_4804238_+\|hypothetical-protein	gnl\|CDD\|378342	pfam09992, NAGPA, Phosphodiester glycosidase. This is a family conserved from bacteria to humans. The structure of a member from Bacteroides has been crystallized and modelled onto the luminal region of the human member of the family, the transmembrane glycoprotein N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase. There is some conservation of potentially functional residues, implying that in the bacterial members this family acts in some way as a phosphodiester glycosidase. The human protein is also present, so the eukaryotic members are likely to be catalyzing the second step in the formation of the mannose 6-phosphate targeting signal on lysosomal enzyme oligosaccharides.	0.000387612
CP012670.1\|AUX23169.1\|4809461_4810994_+\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	3.82651e-104
CP012670.1\|AUX23167.1\|4804423_4806712_-\|sensor-histidine-kinase	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	9.35454e-110
CP012670.1\|AUX23172.1\|4814904_4815165_+\|hypothetical-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	5.66047e-11
CP012670.1\|AUX23179.1\|4822242_4823391_-\|alcohol-dehydrogenase	gnl\|CDD\|341483	cd14861, Fe-ADH-like, Iron-containing alcohol dehydrogenases-like. This family contains proteins similar to iron-containing alcohol dehydrogenase (Fe-ADH), most of which have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. It is distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions.	2.76092e-177
CP012670.1\|AUX23180.1\|4823393_4824755_-\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	5.69631e-123
CP012670.1\|AUX23171.1\|4812517_4814434_+\|uncharacterized-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	6.29628e-90

>CP012670.1|AUX23171.1|4812517_4814434_+|uncharacterized-protein
MDCLRPSAPLDAGFPSSEQFLRGRLLGGRYLIEQMIGAGAMGRVYRARHVGLGRACAVKIIRERIASPPSGGAPPRESTTLRSAPSRRAGAPCRSAIGAGARARTGARSRSGSAPEGDAVLRFHIEALAASRLDHPNIVRVLDFGCEPADPRGADAGGSDAEAPSLWYLVTEHLDGEDLIDLLNAEPVLPAERILSIMRQLCSALQHAHDAGVIHRDVKPENIRLVPRRGDDGEPFEQVKLLDFGTARLLHDDLTGALSGARLLGVPDEDGAGLVIGTPAYMSPEQAAGQAVDARSDIYACGVLLFEMATGRLPFERPTPVALAAAHVECPPPWPSAFNEAIDPDLEALILQCLRKDPEDRPQSARALREALGHIAQRRARDGAAGHAPANLHRTLARSARAEPAPASRRARSTDGVTTGQAAYAASTPHASTWVGHRPSSRPAAGAPPERPCAPPPGAARPTSSASTWVGHRASSYPPAALAERALPCAPGGAPASAARPSASLAPAHPRRPLDVDEQPAPFMLLRARLSAGRRSQAGARRRHRRRFSPLVVGTIAATILGGTLCLLLGAAGAARAPCTAPPPAHAGAAPPAGASHGDAPGHGGPADTAGAPASERPAPVAIPSRLEADEEPSDGGD
>CP012670.1|AUX23170.1|4811221_4812304_-|hypothetical-protein
MLLRRCVPFAAALMLMLPTREARAQSDADKAAARSLATQGAEAFTSGRFDETIDLLTRAEALVHAPTHLLLIARAQMRLGRFVAAKETYLKIVREELPPTAPVAFRKAQQEAREELAAVDPRIASLRIALEGAGDRKISVMLDGQPVPDALLGVHRPIDPGTHGITVVPPGLSPIEQSITLGDGEKKELTIPIPGAPATVPPLAGPGNGQGPGGDGPSGGPPSGPPSAGGERTANVAMLSGGIAASALGLGGVVLGAVFLAKGGGTQRDANDLSATHGCESPNGVGQSCTPLIQGRIRKLDTDAASQKTTGAIGLIAGGALLVGGATLIVLELSSRSAPSRTAWIAPYVAPTGLGVRGAF
>CP012670.1|AUX23169.1|4809461_4810994_+|protein-kinase
MGPLIGEIIDGKYRIVRLLGQGGMGAVFEGENVRIRRRVAIKLLHANISSQAESVARFEREAQAAARIGSDHICEVLDLGVLHDGTRYMVMEYLEGETLGAKIQRSGRLGPEITVPIMAQVLEALGAAHAAGIIHRDLKPDNIFIVPSKAGLSNFVKVLDFGVSKFSQLAGSEMSMTRTGAVVGTPYYMSPEQARGSSPVDQRTDIYAMGVLLYQATTGQVPFDAASFNELLFKIALETAPLPQQLVPDLDLEFSGIIQRAMAREPGSRYQSCAEFKNALLAWAAARPSLALLTTGRTSFPRLVLPSQPETSPPLPRTETPWVSPNGSVAPGLGHTPQLTANSWGASSGGTGRSTRPPSRVSLLAAIAAAATLCGAGLAAWLAFGRGAATTPATADPIALSATATPAAPPPSVSEPLVTASAVAIEPAPPASAVAIEPAPSATTEPSAAPAASSAPAKPAVPPRPPQTKVPPVTKPVQTAPPKPATPTKPTAPTKPTKPMKPGVPGDFGY
>CP012670.1|AUX23168.1|4806716_4809248_-|hypothetical-protein
MPVYELSVDAALVREAEAVVSLEGRAFPTLVMRWESRLFDQPWITTLVLDYAIALPPLVVSQSTFNEVRIAAFTGRAGTKFMYFGTEMSASVPRIAPEMENAISPPELYQEFRLDEHTCPIPYLKLIHVSPRIYGEGLQNYYSPPIKVERYDGVASPELISDFFPKVVANLEPVKGTTLVDPAQGFWTGARFLGATAIAILRQGRVVGLHRRTGKTDKDPLPPEVKRRDPRLDVRGDWVAVDVGAASTVVAVRGERGGAEFVRIGADAPVRVSADNENPTEVAFDALARTTKAWRDRVILPMTRWGDVLVGHAARDMRVRPGADLHERAAASLPALTLLRERTERGEPFRLRGKGDPEATEALKRPAPPIIDEEGIGAHDPFDPIELYAYYVGLHLNQRARGLYTRYAITMPTGWSPERRQSVLVAFRRGLFRSLPAGLCEYHDLEALSVVDAGPSAIVHAVQAFRTFGIQPRDGGVPFCAIDAGASEMGLAFGILRSAKADEVGRGLERMVEYIEPAAIPWLGGERLLHRLAYRVYVANQDAMRERRVPFERPPEEGALDGVDELFAPSPDARANTWALKELVRPLLERGSSAPVEEGITLFGLDGATSFVPLSIDRAALGGAIDAWFREGVELIRQHLDGAVAKIGRAPEPYEGLRVLLGGRVGMNQRFAELLASALPGGVQLHRFKEPDKANLGAPTVKMATALGALSLRLDRIGAALRAEKRDGFRYRVGRGRHGQLADVLDPSVDYDAWREMGACLKPEVEILFMAAQDEGEVAADDPRVRRAVCAFGRGAVGQRLYIRAVGPAQVEVSVGPPGGEPSPDAGCWTVHLESGAAEKTGG
>CP012670.1|AUX23167.1|4804423_4806712_-|sensor-histidine-kinase
MGAPPLHAKGAALEPEGACTAAAPRGDAPPHDLRALLVQTEGRLAAQLATASALAEAGSLAEAAPRVLAALVEHLGWDVAALWLTEPEASAAPAPAGPGCGAPAAQAAPGAGPGGSALRCVEIQAARGREREELAGPRLAELALAAEPELVVEVFRRGAPVLRDGDAGRDGDAAGDGGAAGDGDPGRAWGAFRAACAVPIPVGDGCVGVLEMRRRAPLRGDEQMLRVLSSVGSQLGQRIARQRAERESARTREELRALFRAIPDLCFRVDAGLRIVDYSAQRLAELGVQPAPLLGARVAEALPGELGERLTRAIQEARGAGAVVALEHAAPLADGERHVEARTMPFLDGHALVLLRDITERRRAEEALRQREERSRESQKMEALGRLAGGIAHDFNNMLMVMLGYGELLLRRLGPESALRRDALQITKAGERAAALTRQLLAVSRRKALQREVLDLNAVVLDMQAMLQRLIGENIDLQTIVGRDLGAIRADRSQLEQVLLNLVVNARDAMPGGGALVVETSLGEPGERPAARSFAPAEPDAGGAPAAGGPYVVLTVSDSGCGMDHDTLSHLFEPFFTTKGRGKGTGLGLATVYGVVSQSGGLIEVESEIGRGTTFRVYLPRVADRWEAAPARARPSPSGGDETVLVVEDDDAVRKLVVEVLERRGYGVVAAASAEEALVALAHEGIEEMDLLLTDLVMPGMNGRELAERALALHPRARVLYMSGYAEDVLADAALDRELVLLQKPFTPDMLAQRVRDLLDRR
>CP012670.1|AUX23166.1|4802996_4804238_+|hypothetical-protein
MGYLRRAVDSPSPPDASRPQRAWRPRARWLERALRGVAIAAIAVEALWYGIHEVRGFGPALADGVRAVLGPAPVAWAEDVAYGVADRLNQARYRNATPKTFWEPAPAAAAEGTDDVEPIEEESISSPSPFEPPFAEVAATGDGVWVPIRDAVRPNDAPVLWKSVVHPDPRRSFSAIAVVAIDLGRVDLQLVAGTKEPFSPDVPAERRPGLIPEAHAAELIAAFNGGFKAMHGHYGMMLDGDTFLPPRNIACTIALYRGGAVRIRTWRKIRGDEPRMIGYRQTPRCLVEQGELHYLLYDSNRDWGATVSGETVIRRSALGIDATGKLLFYGLGEAVTARTLAQGMKAVGARDVAELDVNHAYPRFLLYSRGAGGAGPRATSALIPDVQFKPEEYVAEPSPRDFFYLRRKTGSSS
>CP012670.1|AUX23165.1|4802448_4802931_+|hypothetical-protein
MTTKKLRTGGEVDAWCTKCRLDLTHRIIAMVGDVVKKVECKTCMSHHLYRQPKSERESRAAARAAARSSEPRSSSSRAGGVERLTAAQRAERDQTLAWERAIAGQPSGAFKPYRINLTFGEGELIHHSKFGDGVVAKVIDRGKIEILFKDGPRTMAHGQV
>CP012670.1|AUX23164.1|4801945_4802452_+|hypothetical-protein
MADDTDPPRDDEGDKVEGEGEKKRLFERAIPEIFKRVVERAVESGIDKLSEGPENLRNFVGDLKLPKEVLHYLYTQIDDTKNGLYRVVAKEIRDVLEHTQFADEITKVLTKLSFEIKTEIRFVPNDAAKRDDSQDEARTGLPKPEVSAQVSVKDRSKETGRDRRREEK
>CP012670.1|AUX23163.1|4800962_4801865_-|uncharacterized-protein
MDLPDFDEDGEHFARARRATGLFLRAPRAGRRADRDVAPRRPGGSEPVVGVPVLVNIVFRRSLVRLQDPHLRREPARPAPRADLDGGAVVVLERADGAIRLDDRPRVLAAVARDHGAAAAAHGDVEVDDPRSAHGEHPVTSAADELELLGDDRAALGHVPFDRLGREPPHAVRRAAEQRQARDVLLWVAGEPEVAVAAHPRAAHAHRRDGQIRILEGAGVALGLGGGGLRQLAGLDQRRGLWRRRREHGRRSSLALPGARRVAAPRGDAPDEQGGAEARGPREMRRGARAPARHRGRLLR
>CP012670.1|AUX23162.1|4799644_4800892_-|adenine-glycosylase
MSTAKREPAGASQRRAPRRGRAASGERGAGERGAGPPPPDAPGAEAEPCERDRQIAAALAAWFGRAARDLPWRRTRDPYAIWLSEVMLQQTRVETVIPYYERFLARYPTVFDLAAAEIDDVLSLWSGLGYYRRARVLHLAAREVTVRHAGALPRDVSALRALPGVGAYTAGAIASIAYDRPAPLVDGNVARVLSRVEGIEDDIRGAAGTRRLWSTAERLVRAAAGSVQPGRFNQALMELGATVCTPRNPRCDACPVDGACVARAQGRQAELPVIAPKRDVPAVAMVAAVVRSGDRVLFVRRAEGGLFGGLWEPPMVEAPALADARALLERAGVAPDAPLREIGRVRHILTHRRLDVTVARAEVPAPWRCRAKLASPYEKAAWLDPGVLEFGVSKLARKVLSVASAPDVGAARRPR
>CP012670.1|AUX23172.1|4814904_4815165_+|hypothetical-protein
MSVLLWILFGLIVGVIAKLLTPGRDPGGFVVTTLLGVAGALLGGFIGRAIGLYPSYQSSGGFFMSILGAILILAIYNATIGRKARP
>CP012670.1|AUX23173.1|4815128_4815959_-|hypothetical-protein
MIALPVPLLALSAQGSSLPRVEPGAPGATSEIDAAIERQAVCVGSTVASAGELGDVLYYRTSTDEHGDISVGYFAFFSEERPWGNNWLTWTVLPAVAVDLVYTHSLFLGPGVQRFAYGKGDVEGFRIVYRMEADGRLTVEHGVADRGDHSEVRLERADLLSIEAERPTVYSRWWSHQLGGQGAGPGELVYRRCYGAGAIRPLPPDVALDFRLDRRAGPARVVPAAALLGQPAPTELASPELAGPRLAPPQVAGPRKDEPPRGADDQGRAFRPIVAL
>CP012670.1|AUX23174.1|4816257_4817586_-|uncharacterized-protein
MDLPMGEGGYALLARLSAGGMAELFLACRRGPAGIAHPVVVKRLRPEARRDPSIVRMFLCEAWISARLQHPNVIRFHDFIFHEGHHHLVVEYVPGCDLAAAARVFSTEGRPFPIDAAIEIGLGVLRALGHAHGLRDDEGRLVGLVHRDVSPQNVLLSLEGEIKLIDFGVAKMTAMDAAEDAVCPALLRSAGGATLSTGSGMVKGKLGYVAPEQLRGERIDARADLFAVGVILFELLTGRRLFHRKDDGETMSAVLSGEVPAIAPLRPACPALLEEAVRRALAREPEGRFASAAQMEETLAEVLASLRRAPGGREERSSERGLLAGEELAALVREVVSGRDRHRSLLVRSCRRSGGLRGRTGVRRAAAGRPGDGRDEATPRTPAPGASALDDGGAGDDLEAARQAATPHWRGARPARRGRLLPWLVIAAVTLIAGALAAKALG
>CP012670.1|AUX23175.1|4818002_4819451_-|polysaccharide-biosynthesis-protein
MQDGRRIARNAALMLLKQAIMAVLGVVFVGYLARKVGVAAWGEFQASLATAGMVTLVAGVGVRGYLAREVAVRPELGPRHLGAALAIRGVTGTLVLGATAAVALATRSGLGAQLVVLAAASQLATLLYSTMWLSFEAHERFQYILYAELGARLFVIALAAALLALGFGVVAAATAFLLGNVLELGITYHFLRARLYRPELSTPPAELWEITKRSLPIGALGVLASALLQTDRVMLRALCDEEAVGVYSAAWVLSESFRMLPDVLLGAAFAAGMRLYAQDGEAFGRLYSGCMLVAALVGLPVAAGLFVLAPDVIRLVYGTAADYAPAADVLRILACSVPVMFAFQVVTLPLLAAKREVAMVKLLALTLAANVALNLLLLPRYRALGAAGATLAASTGSLLASWIMTARWARFVAPGRVLAILAATALMGVAAYAARALAGMWASIAVGVAVYVVLLVALRAVSFRELRALLARRVRASPAAAT
>CP012670.1|AUX23176.1|4819912_4820467_-|hypothetical-protein
MIARRAARERATPASERLPASEKLQVVGPRGPGPRAARGFRVLLAHDARAATCDALALALESSMANVEIVDASSIDDALLASATERFDAFLVCLDLPPAPLGGVRLASELVETNHPVVLVTRSLRWVPPDRPALLELPWIPPDAAPGEITRAIEAATSDCDSMVRSRAPLSGDMLRAQAVRARR
>CP012670.1|AUX23177.1|4820764_4821073_+|uncharacterized-protein
MSRFLISTRCECQATLSATLDEHRHVTAGWAVRGRPADDGADKELAPAHSINAHLDRFDVAWLCPYCGRNTLRTFYADAMRRLPAGAPPAAEPARSGTASPT
>CP012670.1|AUX23178.1|4821462_4822122_-|fatty-acid-hydroxylase
MRYQGGTMTVTATERTARPATCQMFETPLIERFSRIHPITPFVFWLPVYGYLGVRAARHGVGLLEGLGLALAGLFLWTLAEYVLHRYVFHYVGPRLWQRRMHFVLHGVHHDFPQDADRLVMPLGASIPLGVVFYMLFRAAFGPVPADPLFVGFGLGYLVYDGTHYAIHHFRMSSRLGKWIKRHHMVHHHTGENARWGVSSPLWDWVFGTMGSSTTGKGG
>CP012670.1|AUX23179.1|4822242_4823391_-|alcohol-dehydrogenase
MSQFTVWSFPTRILFGAGVVGQTGGEARRLGATRALVVTDKGVVRSGLLEPVAASLRGAGLEVAVFDDVLGNPVEKNVHDGVAAFRDARADLVVALGGGSPLDVGKLVRLGVHHDRPLVDYDDATGGDRFITSDVPPMLAIPTTAGTGSEVGRSGVVTLDVNHRKTVIFSPRLLANAALLDPEMTRSMPAFLTAATGFDALTHCLEAYVAKGDHPMADGIALEGIRLAAAHLERAVSHGDDLEARGGMMKAAMMGAVAFQKGLGACHSLAHPLSSECGLHHGLANALCLPAVVAFNVAAAAPRLARVAALLGAPEDAAACAEAVRALRARVGLAAGLEKAGVPAGKLDALADLAAQDACHTCNPRPCSRDDLRRLYEASFAG
>CP012670.1|AUX23180.1|4823393_4824755_-|glutamine-synthetase
MTASTSEKLVSDLEARGITRAKIGGFDIDGILRGKYVSLEKLKSALGGGFGFCDVIFGWDIADVLYDNAKVTGWHTGYPDAHAVLDPSTLRDIPWEPGTAAMLADFRDEHGGPHPACPRSLLRGVLARAERMGYSAKLSCEYEFFLFDETPRSLHDKRFAGLSPLSPGMFGYSWVREGQHRELMAAILDGMRAFDVEIEGLHTETGPGVYEAAIRYDDALRAADKAALFKVAMKQIAHEHGLSVTFMAKWNADLPGSSGHLHQSLWKDGQNVFQDASAPGRIPAALRHYIGGQIALMPELTALYSPTINAYKRYVPGVWAPLTASWGVENRTAAIRLIGLGTPGARVEYRQTAADINPYLAMAACLAAGLHGIEHGIEPPPPSGGDASSAASSRHALPRSLAEATRLLAESRRAREILGETFVDHYVQTRDWEVRQYERAVTDWELKRYFEAV
>CP012670.1|AUX23181.1|4824836_4825502_-|hypothetical-protein
MPDPTSGGALAAQRAEESVSVRFTRLMNASASRWGVLTDPPVVSLATGVFLFALLGALGRDAGPTVVRALGALAAAPIAVAVVASVALRGARREVVAWLARQPFPVENMNAVLNGLGEALEVTFAARAPGAAYRDASEASSAAAIPETGLLNAELEKVHPDVFVTGGVEDARTLDIRIGVVDSKRNPAVTNHRRYVRVRAIVERALVPLAERYPIQSVRVK

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Crispr_ID: CP012670_29

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_29

5229701-5229817

Orphan

Consensus_repeat	Method
CCCCCTGGCAGCTCCCGTCTCCGGGGGGTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_29

>merge|CP012670|29|5229701-5229817|CRISPRCasFinder
CCCCCTGGCAGCTCCCGTCTCCGGGGGGTGGATCCTCCCCACACGAGATGCCTCTAGCCCGTCTCCATGCAGCGGCATGTCCACCGCCCCCTGGCAGCTCCCCGTCTCCGGGGGGTG

>CP012670|29|26|5229701-5229817|CRISPRCasFinder
CCCCCTGGCAGCTCCCGTCTCCGGGGGGTGG	ATCCTCCCCACACGAGATGCCTCTAGCCCGTCTCCATGCAGCGGCATGTCCACCG
CCCCCTGGCAGCTCCCCGTCTCCGGGGGGTG

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX23465.1\|5234585_5235116_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX23454.1\|5222842_5223625_-\|thiazole-synthase	unknown	unknown	gnl\|CDD\|234687
CP012670.1\|AUX23450.1\|5219288_5219879_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|99749
CP012670.1\|AUX23453.1\|5220961_5222245_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340828
CP012670.1\|AUX23460.1\|5229970_5230180_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX23462.1\|5232354_5232741_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX23457.1\|5225468_5226587_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176654
CP012670.1\|AUX23469.1\|5238218_5239613_-\|phosphomethylpyrimidine-synthase	unknown	unknown	gnl\|CDD\|376689
CP012670.1\|AUX23467.1\|5236284_5237337_-\|twitching-motility-protein-PilT	unknown	unknown	gnl\|CDD\|225364
CP012670.1\|AUX23464.1\|5233893_5234253_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225511
CP012670.1\|AUX23452.1\|5220560_5220893_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX23468.1\|5237484_5238222_-\|thiamine-biosynthesis-protein	unknown	unknown	unknown
CP012670.1\|AUX23456.1\|5224419_5225379_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|334067
CP012670.1\|AUX23463.1\|5232760_5233894_-\|integrase	unknown	unknown	gnl\|CDD\|366234
CP012670.1\|AUX23466.1\|5235145_5236207_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX23451.1\|5219922_5220543_-\|thiamine-phosphate-diphosphorylase	unknown	unknown	gnl\|CDD\|238317
CP012670.1\|AUX23455.1\|5223758_5224433_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX23459.1\|5228424_5229498_-\|biotin-synthase	unknown	unknown	gnl\|CDD\|273075
CP012670.1\|AUX23461.1\|5230230_5230704_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX23458.1\|5226708_5228385_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366370

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX23454.1\|5222842_5223625_-\|thiazole-synthase	gnl\|CDD\|234687	PRK00208, thiG, thiazole synthase; Reviewed.	8.72337e-167
CP012670.1\|AUX23469.1\|5238218_5239613_-\|phosphomethylpyrimidine-synthase	gnl\|CDD\|376689	pfam01964, ThiC_Rad_SAM, Radical SAM ThiC family. ThiC is found within the thiamine biosynthesis operon. ThiC is involved in pyrimidine biosynthesis. ThiC participates in the formation of 4-Amino-5-hydroxymethyl-2-methylpyrimidine from AIR, an intermediate in the de novo pyrimidine biosynthesis. Thic is a member of the radical SAM superfamily.	0
CP012670.1\|AUX23453.1\|5220961_5222245_-\|glycosyltransferase	gnl\|CDD\|340828	cd03798, GT4_WlbH-like, Bordetella parapertussis WlbH and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. Staphylococcus aureus CapJ may be involved in capsule polysaccharide biosynthesis. WlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.	3.12802e-112
CP012670.1\|AUX23457.1\|5225468_5226587_+\|hypothetical-protein	gnl\|CDD\|176654	cd06142, RNaseD_exo, DEDDy 3'-5' exonuclease domain of Ribonuclease D and similar proteins. Ribonuclease (RNase) D is a bacterial enzyme involved in the maturation of small stable RNAs and the 3' maturation of tRNA. It contains a DEDDy-type DnaQ-like 3'-5' exonuclease domain possessing three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific YX(3)D pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis. In vivo, RNase D only becomes essential upon removal of other ribonucleases. Eukaryotic RNase D homologs include yeast Rrp6p, human PM/Scl-100, and the Drosophila melanogaster egalitarian protein.	2.01066e-37
CP012670.1\|AUX23450.1\|5219288_5219879_+\|hypothetical-protein	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	4.33887e-35
CP012670.1\|AUX23467.1\|5236284_5237337_-\|twitching-motility-protein-PilT	gnl\|CDD\|225364	COG2805, PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion].	2.50612e-121
CP012670.1\|AUX23464.1\|5233893_5234253_-\|hypothetical-protein	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	0.00945942
CP012670.1\|AUX23456.1\|5224419_5225379_+\|hypothetical-protein	gnl\|CDD\|334067	pfam00413, Peptidase_M10, Matrixin. The members of this family are enzymes that cleave peptides. These proteases require zinc for catalysis.	3.44848e-18
CP012670.1\|AUX23463.1\|5232760_5233894_-\|integrase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	1.12396e-25
CP012670.1\|AUX23451.1\|5219922_5220543_-\|thiamine-phosphate-diphosphorylase	gnl\|CDD\|238317	cd00564, TMP_TenI, Thiamine monophosphate synthase (TMP synthase)/TenI. TMP synthase catalyzes an important step in the thiamine biosynthesis pathway, the substitution of the pyrophosphate of 2-methyl-4-amino-5- hydroxymethylpyrimidine pyrophosphate by 4-methyl-5- (beta-hydroxyethyl) thiazole phosphate to yield thiamine phosphate. TenI is a enzymatically inactive regulatory protein involved in the regulation of several extracellular enzymes. This superfamily also contains other enzymatically inactive proteins with unknown functions.	3.05728e-43
CP012670.1\|AUX23459.1\|5228424_5229498_-\|biotin-synthase	gnl\|CDD\|273075	TIGR00433, biotin_synthase, biotin synthase. Catalyzes the last step of the biotin biosynthesis pathway. All members of the seed alignment are in the immediate gene neighborhood of a bioA gene. [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin].	6.20005e-159
CP012670.1\|AUX23458.1\|5226708_5228385_+\|hypothetical-protein	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	1.99767e-48

>CP012670.1|AUX23459.1|5228424_5229498_-|biotin-synthase
MLDGMETEAAGHTGERGDRGERVPAAGTAGEVRHDWTVAEAMALHDLPLFALIDRARSVHRAFHGEHEVQLCTLLSVKTGGCPEDCAYCPQSSHHETEVGPERMLDVGAVLAAAERARAGGSTRFCMGAAWREVKDGPAFDRVVEMVRGVKALGLEACCTLGMLTEDQARRLKEAGLDAYNHNLDTSRKAYKSIISTRTYDERLITLRNVRRAGITVCSGGIIGMGESIADRCEMLVELARLDPHPESVPINALVRAAGTPLEGLPPVDPIEFVRMIAVARLMMPRSMVRLSAGRTELSREAQLLCMYAGANSIFYGDKLLTTPNPGPDEDRALIEKAGLQPMAPAACAEARGDARA
>CP012670.1|AUX23458.1|5226708_5228385_+|hypothetical-protein
MPRTDPDAPRWRRFLPATWSFRAAFAFALVFGCVLLGARAGELSPPPPPSTPPPVGAAEGVDEATQVAPDSPRASLRKFIDLCRAGNYAEAARYLDVPPRADGVALAQRLKAVLDRHLWLEPDALSPHALGDTQDNLGNGVEQIGTIPTRTGTQPVRLVRRVTPDGVRWLFSRATVVRIDEWYAQLEDRWLRDHLPPALLRPGPRELLWWQWLALPILALASWVVGAVLSFLLRAALRHLVLRTESTLDDALLAVARGPLTFAGALLAMAVALPWLKLYLPAEQFLDAVLRAGAFVAVFWLVLRGIDAVGGRLLEAPATRDNPAARSLVPLMGRIAKVTILIIGAIAVLSELGYPVASLIAGLGIGGVALALAAQKTVENLFGSVSIGIDRPLQVGDFVKIDLVLGTVESIGLRSTRIRTLDRTIVTIPNGKLADLQIESYTARDRMRLHCFLNLVRETTPAQLRAVLEGCERALREHPHIWPDDVVVRFVGLGPSSLDVEIMAWFQTQDFGEFRTMRQEALFSFLEVIASSGSSLAYPTQTVRLAKGAPERPQPGLS
>CP012670.1|AUX23457.1|5225468_5226587_+|hypothetical-protein
MEANGLFAYRPRLCTVQLAFREGDRVAVGIVDALRVPVAPLAPLLGAAGPPKVLHDLTFDARMLAEAGAPLAAARDTSVAARMLGRAATGLGALLLSELGVKVDKQLQQHDWARRPLARAELSYLADDVLHLLPLDARLAEQGRALGIEDEIAEECAYKLGAALGPPRDPRPAYARIKGAQALDPEGRAILRRLVDARAAAAAAADVPAFKIVANEVLLELARRKPARADDVRAVRGAAAGRAAPLIEAWLRAALQGRADGDVPEEDRALFQPVRPSRRELAARRALEGRLTAWRRAEAKARSVDEQVVLPGHCAQDLLTIALAEGHAGDAAVAAAIARIPGLGARRLARYGRALAALVAAARESEPPGPAV
>CP012670.1|AUX23456.1|5224419_5225379_+|hypothetical-protein
MRSSDPAISGRARRGAALVSSVIAAAALAHPSPALSYCRTSVCPETKQTAAVCTPAQPNDCGIPLAWPSPCVSYSIQEDASTQVSLADTEAIFEEAFAAWTQADCGGGRTPRIELVYTGPVACDAHEYNQTKGNANIITFRDDRWPYAGAGSTLALTTVTYNLKTGDIYDADMEINSSDVDLSIGDSRPSFDLLSIATHEAGHFLGLSHSSDFDATMFADYRPGSVALRDLDDDDRAGICAVYPPGAPIKGCDPTPRHGFSGACAADQPDEEDGGCAAAPGGRGGAPGAGILLAALASLGAAARARRAAAGRPGRERSR
>CP012670.1|AUX23455.1|5223758_5224433_+|hypothetical-protein
MSPRAFGLTLLVALPAALTLTPGGGSGTAAQGSAGALPLLSGPREAHAAVSIQLSLDELVSFTSYVVVATATEQRSQWEEIGGARRIVTYTRLTVDRAVAGQPDADVWVRTLGGVVGDVGQQVSGDAHIKLGTQAMLFLTRAGSAVVVSGMAQGHYPVVDGAEPRGLTGGPRVAVRRLAPSPDSGTLLPRPGPSISAREQLVGATLDAAIDLVGRAWKAKHAQQ
>CP012670.1|AUX23454.1|5222842_5223625_-|thiazole-synthase
MTSDALTIGSHTFTSRLFVGTGKYKDLDETRRALEASGAEVVTVALRRVDLKARGEGSMMSLLQQGRFKILPNTAGCYTAEEAVRTCRLARELGLSDLVKLEVIGDERTLFPDNEATLEAARILVKEGFTVLPYCIDDPIVCRKLEDIGCAAVMPLAAPIGSGLGIRNPYNLMIIREAARVPVIVDAGVGTASDAAVAMELGCDGVLLNTAIASARDPILMAQAMRDAVRAGRMAYLAGRMPKRLYATASSPEQGKISAL
>CP012670.1|AUX23453.1|5220961_5222245_-|glycosyltransferase
MRRMRVLLITKIFPNAVHPDEAPYNRRQFAALSRHCDVRVLATIPWFPGMERLSRWPVGAKAPREEVIDGLPVRHPRYLYVPRVAPALNGPLYAASMLPEIVRLGPRPDVIVGAFAYPDGFASVCLARLLRVPAVIKVHGSDIDVIPRDRRMRGPLRWGLSRATRVVAVSRTLADGVEALGVPRDRIDLIMNGVDLRLFRPRGRAEARAALGRPAGSRLLLFVGHLNRDKGVLDLLAAFEQLTRGDPDIELAIVGSGSEEQACRAVAARLGGRLTVTGYLPHDQVSLWLGACDALVLPSLHEGTPNVVLEALAAGRRVVATSVGGIPDILHSAELGELVPPGDTAALADALRRAARQAYEPARVAELAGGRDWDDSARALHETLLCAVRGARRRGADGREGDELPFSAPVPRSGMENGAARAGAPLT
>CP012670.1|AUX23452.1|5220560_5220893_-|hypothetical-protein
MVLVLTGFRAVLGSLVVLAAVARAPYQCASEVDPDRRLYEDPSEALYELAERFEASGERRARVDTLRFLVERYPSSRFARMARRDLDALGDAGAPGGRAPGDRAPDDPAR
>CP012670.1|AUX23451.1|5219922_5220543_-|thiamine-phosphate-diphosphorylase
MLIPRLTLITQTADVPEPLLLARLSAFGALPAEARARVSVQLRDPALSGAALHALGRRLRDATAALGASFVVNDRLDLAVLLGADGVHLGRRSVGVADARALLGEGAFVSVACHGVDDVLRAAEAGADAAVLSPIFATPGKGPPLGPEALREARARLAAAPRRVALIALGGVDAASAPRCLAAGADGVAAIRADFGGALPAPPGGA
>CP012670.1|AUX23450.1|5219288_5219879_+|hypothetical-protein
MSAQHPPFPGNAPEVEAAFQAVPDEMVAEILDGELFTFPRPARPHTRTASRLGRRLGPFDDDPGEPGGWVILDEPELHLGPGPDKVVPDLAGWRRERMPDALGPDDAPAHYDIAPDWVCEVISPSTERVDRGKKMRIYRREGVRHAWLINPVAQTLEVYRLDDGRFWLLDPHEGDAAVRAEPFGALELPLAALWAR
>CP012670.1|AUX23460.1|5229970_5230180_-|uncharacterized-protein
MTAREALRALLQRIEGHADPEIAGSEALVAFLLAPYVELVDDVARDRRRARPKKGEPAPALPSGASDMP
>CP012670.1|AUX23461.1|5230230_5230704_+|uncharacterized-protein
MNPNVAAPRDASRAPNELAAEVMTLSAELQALAASFEEAIAPHKDLLATHGAPMPDLTSGALRSLSAMLGYEMRPLCEAASSSWREAGCDVLRGRFDAAEAELRTSLPRKVAAGLASLREMGMEAALLDAAQARLDAGDVKGAAIAHDAAVRGAEGT
>CP012670.1|AUX23462.1|5232354_5232741_+|uncharacterized-protein
MSESGPTFFAWCDAAETLEAFLAALSALVDPRLPICVRKDGTLTDTTSMDEAVEMIRTEFAEGPAGGALFDVLLSASKRIFPCSGYCYTEEAGRDISAGPIDMTTCDQRRFLCSLLELAWGSGKCQQV
>CP012670.1|AUX23463.1|5232760_5233894_-|integrase
MDVIEQLDDPHVPIAQACEALGVSRATLYRQTRPAPPPAPPRPAPSPRRLSDPERKAVLDVLHSDEFVDQPPPEVYATLLSRGVYLASIRTMYRLLAASGESGERRAQRGPMKHAKPTLTATAPNQIWTWDITKLRGPLPGVFYCLYVVLDLFSRMTVGWLLAERESAELAEQLFAETVARHGVEPGSLTVHADRGSAMRSEGLAQLFGSLGVGRSFSRPHVSDDNAFSEAQFKTLKYQPDYPDRFASLTHAQAWCQEFFGWYNDLHQHSGLALFTPADVFYGRVEDIAARRQVALDAAYAAHPERFPNGPPVVRRPPASVAINPLSVDDAAGEAAAPPHTGTTSDAPEPGATPAAAARPLPLTSQSRNAPLCAIHS
>CP012670.1|AUX23464.1|5233893_5234253_-|hypothetical-protein
MPKPGKRRKFSAAEKLRIVREAAACTQRGDIEALLRREGIYSSLLAAWRKQLALHGSEALAERKPGRKPKQDAKDRRIAELEKRSARLEEKLALAEKLIDLQKKVSAILGVNLTTDGER
>CP012670.1|AUX23465.1|5234585_5235116_+|uncharacterized-protein
MCATYNADARDIARDLALSWLQRHDKEMVSRNAGLSLEALRARVEVAPAGARVPLKGGSDRAHALSRETVLKALATPPSALLEALEVAAAPDDAWRAAEPRAREILALTSQIAETGEGPPTWQVHTDTRAHVRFLRKHAPFHVRRLAGGGVILATHPYRSLWPLWVDALFSLGLMP
>CP012670.1|AUX23466.1|5235145_5236207_+|hypothetical-protein
MKPGPYFFAWCDEAERIDAFAAALPALVARGSSISVRMGSDVDRTVNFVDEAVAMMRAHFGHTDTETCFDMELDDRRILCGHYRCFTDKSERLKPRGPIHLVSADVADILPLEMYLALGSGPRSVEAEAELTWHIVLDDLEDLLLRLCAPDATGRVSTGGCTSAWTWLAPVSMCATYHADARDIARDLALSWVSLHDGESVSRIAGLSTEALRARVDAAPAGARVVPTDKSGRSIPLSRETVLKALGLPGSALIEALIAAADVPDEAWRAAEPRAEEIHNLTVQARARGESFTRGGGSLAWVEMTGEHVYFLVDHAPFHVRRLPNGGIVLATHPYRTLWPLWADALFALGLMP
>CP012670.1|AUX23467.1|5236284_5237337_-|twitching-motility-protein-PilT
MTTPYSSEAFLHQLLGKALAAHASDIHLKVGQPPGARVRGDMVYFRVDKIRPEDSEAAARVLLAGQPARDELAALQEHDTSVVVPGLGRFRVSLYRQRGSLAIVLRSIPLQVPSFDELGVPSAVRALAEQDHGLVLVAGTAGSGKSTTLAAFVGHINATLPRHIITLEDPIEHVHEDNRSSVSQREIGVDTADFPTALRAALRQDPDVVMVSSLHDGASFELALHAAETGHLVLAAVHTPDVARTLGRLLALGKSPGEARDRLADCLLGVVAQRLLPRRDGTGEVLAAEVLIATAAVREAIRRPEGSPSLRELMEKGVTPYGMQTFEAHVRQLVGQGIITKETAKAVTSL
>CP012670.1|AUX23468.1|5237484_5238222_-|thiamine-biosynthesis-protein
MRRAPGSGRGGVRHGGVGRGAVGRGAVGRARGAAPAAARLASVALLALSLCAPLACRRESSTGATVAPPPSGPPPTAAPRPPSPRLTDPRWRRAAGDDPLELARLAEAEGATELLAALDDGGEIERTALRALPYADDADLGLAPLAERARAAPVASLGPLLEALLGIAGRPPRPREPLDPDGLRVAAAVLLELSGRQDLPAAQRALAISAARALADKGLLDPGRIPADLDPDVSPQGSAAGQAPP
>CP012670.1|AUX23469.1|5238218_5239613_-|phosphomethylpyrimidine-synthase
MLRTEWVSKRAGSPNQSQMHFARKGVITEEMEYVARRENLAPELIRSEVARGRMVIPANKNHVNLEPMCIGIASLCKVNANIGSSQTTSDVDGELEKLRYAIKYGADTVMDLSTGGDIDGIRRAIIADSPVPIGTVPIYQALEACKGTAKMTASDLIDMLEHQAKQGVDYFTIHAGVLLEHLPLVKGRITGIVSRGGSIMAQWMIEHGKQNPFYAHWDKVLEVCAKYDVTISAGDGLRPGCLHDASDAAQFAELKTLGELTKRAWEKDVQVMIEGPGHVPFDQIAMNVQKEMELCHEAPFYVLGPLVTDFAPGYDHITSCIGATMAGFAGAAMLCYVTPKEHLGLPNAEDVKQGLIAYKIAAHAADVARKRPGARDRDDALSRARYAFDWNKQFALALDPETARAMHDETLPQEYFKTSEFCSMCGPKYCSMHINRVVDEYNAKLDAAAENAPTKRSLSLIDPA

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Crispr_ID: CP012670_30

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_30

5956158-5956257

Orphan

Consensus_repeat	Method
GGTGTGGGGGACGGGCCGATGTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_30

>merge|CP012670|30|5956158-5956257|CRISPRCasFinder
GGTGTGGGGGACGGGCCGATGTCTGAATGGGATTACAAGCAACAAGGGTAGGCGCGCGGAGAGGGTGCGCGTCGGGCGGTGTGGGGGACGGGCCGATGTC

>CP012670|30|27|5956158-5956257|CRISPRCasFinder
GGTGTGGGGGACGGGCCGATGTC	TGAATGGGATTACAAGCAACAAGGGTAGGCGCGCGGAGAGGGTGCGCGTCGGGC
GGTGTGGGGGACGGGCCGATGTC

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX23989.1\|5954146_5954533_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319924
CP012670.1\|AUX24001.1\|5973176_5974232_-\|anti-sigma-factor-antagonist	unknown	unknown	gnl\|CDD\|132912
CP012670.1\|AUX23993.1\|5958132_5958348_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX23994.1\|5958266_5964659_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|162730
CP012670.1\|AUX23995.1\|5965039_5966743_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|153097
CP012670.1\|AUX23982.1\|5946978_5948013_-\|NAD-dependent-dehydratase	unknown	unknown	gnl\|CDD\|275033
CP012670.1\|AUX23990.1\|5954714_5955626_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|275079
CP012670.1\|AUX23984.1\|5948669_5949530_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|226098
CP012670.1\|AUX23985.1\|5949564_5950560_+\|cysteine-synthase	unknown	unknown	gnl\|CDD\|107204
CP012670.1\|AUX23991.1\|5955710_5955881_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX23983.1\|5948116_5948557_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX23999.1\|5970227_5970767_-\|phosphopeptide-binding-protein	unknown	unknown	gnl\|CDD\|366133
CP012670.1\|AUX23997.1\|5968184_5968871_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX23987.1\|5951831_5953274_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|236090
CP012670.1\|AUX24000.1\|5971025_5973167_+\|beta-xylosidase	unknown	unknown	gnl\|CDD\|367535
CP012670.1\|AUX23992.1\|5956436_5957981_-\|inosine-5-monophosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|180842
CP012670.1\|AUX23988.1\|5953648_5954092_+\|regulatory-protein-pocR	unknown	unknown	gnl\|CDD\|225117
CP012670.1\|AUX23998.1\|5969144_5970185_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX23986.1\|5950624_5951479_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP012670.1\|AUX23996.1\|5966703_5968185_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX23989.1\|5954146_5954533_+\|hypothetical-protein	gnl\|CDD\|319924	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	4.00034e-44
CP012670.1\|AUX24001.1\|5973176_5974232_-\|anti-sigma-factor-antagonist	gnl\|CDD\|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	5.63489e-40
CP012670.1\|AUX23994.1\|5958266_5964659_-\|hypothetical-protein	gnl\|CDD\|162730	TIGR02148, ORFveg106_random, fibro-slime domain. This model represents a conserved region of about 90 amino acids, shared in at least 4 distinct large putative proteins from the slime mold Dictyostelium discoideum and 10 proteins from the rumen bacterium Fibrobacter succinogenes, and in no other species so far. We propose here the name fibro-slime domain.	1.55297e-17
CP012670.1\|AUX23982.1\|5946978_5948013_-\|NAD-dependent-dehydratase	gnl\|CDD\|275033	TIGR04180, NAD-dependent_epimerase/dehydratase, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family. This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster.	2.35047e-158
CP012670.1\|AUX23995.1\|5965039_5966743_+\|hypothetical-protein	gnl\|CDD\|153097	cd00657, Ferritin_like, Ferritin-like superfamily of diiron-containing four-helix-bundle proteins. Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterioferritin, ferritin, rubrerythrin, aromatic and alkene monooxygenase hydroxylases (AAMH), ribonucleotide reductase R2 (RNRR2), acyl-ACP-desaturases (Acyl_ACP_Desat), manganese (Mn) catalases, demethoxyubiquinone hydroxylases (DMQH), DNA protecting proteins (DPS), and ubiquinol oxidases (AOX), and the aerobic cyclase system, Fe-containing subunit (ACSF).	1.62652e-11
CP012670.1\|AUX23990.1\|5954714_5955626_-\|uncharacterized-protein	gnl\|CDD\|275079	TIGR04247, nitrous_oxide_maturation_protein_NosD, nitrous oxide reductase family maturation protein NosD. Members of this family include NosD, a repetitive periplasmic protein required for the maturation of the copper-containing enzyme nitrous-oxide reductase. NosD appears to be part of a complex with NosF (an ABC transporter family ATP-binding protein) and NosY (a six-helix transmembrane protein in the ABC-2 permease family). However, NosDFY-like complexes appear to occur also in species whose copper requiring enzymes are something other than nitrous-oxide reductase.	1.19374e-06
CP012670.1\|AUX23984.1\|5948669_5949530_+\|uncharacterized-protein	gnl\|CDD\|226098	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only].	1.195e-23
CP012670.1\|AUX23985.1\|5949564_5950560_+\|cysteine-synthase	gnl\|CDD\|107204	cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.	1.00202e-146
CP012670.1\|AUX23999.1\|5970227_5970767_-\|phosphopeptide-binding-protein	gnl\|CDD\|366133	pfam00498, FHA, FHA domain. The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.	1.06875e-17
CP012670.1\|AUX23987.1\|5951831_5953274_+\|uncharacterized-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	2.22233e-05
CP012670.1\|AUX24000.1\|5971025_5973167_+\|beta-xylosidase	gnl\|CDD\|367535	pfam03512, Glyco_hydro_52, Glycosyl hydrolase family 52.	0
CP012670.1\|AUX23992.1\|5956436_5957981_-\|inosine-5-monophosphate-dehydrogenase	gnl\|CDD\|180842	PRK07107, PRK07107, IMP dehydrogenase.	0
CP012670.1\|AUX23988.1\|5953648_5954092_+\|regulatory-protein-pocR	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.33079e-28
CP012670.1\|AUX23986.1\|5950624_5951479_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	5.95803e-127

>CP012670.1|AUX23991.1|5955710_5955881_-|uncharacterized-protein
MVGSSAPVIGILVATAWAVKVHARPTVLVHDDDDDDGRVFVIRKGKGKGKWRFRRW
>CP012670.1|AUX23990.1|5954714_5955626_-|uncharacterized-protein
MMERSDVCEPQAGSGRRIPSSALSVRRALLVLACAGAVGCGGDDTTGTPEDVDVSAGATAVVAIINPVVNEPHGTGVPAELGDARDGIVVAATPGGRDITAGGIAVVGAPAGGIELDVSGATLSHTIQAEGDVVDAPIAFSGSAAAFFDNTPIRYAVSEASGAIFLDPSVPMADLEARLAEDGRVVVLRPGRYVGSITITGRGTLLYGEGFLERAVIIDGGITVQGEAVRLRGLTITGDLASRGNDFGISFSVVRGNVSITGNAGAFVRNVFCGETVVPSSNATLLDNHGVAPLNDLPPVVCD
>CP012670.1|AUX23989.1|5954146_5954533_+|hypothetical-protein
MKIKLNSIMVEDQDRALKFYTEVLGFKKKHDIPVGEYRWITVVSPEGPDDVELVLEPNANPAAKTFQQAMFTQGIPLTAFEVTDLQAEFTRLKEQEVAFTQEPTPAGPVMIAVFSDTCGNLIQLYQPL
>CP012670.1|AUX23988.1|5953648_5954092_+|regulatory-protein-pocR
MLLGRDTLRNLCRARDLLSEVRESRLSIEDVARAAAISPYHFIRQFEAVFGVTPHQYRIRRRLDLAKELLAAGRHSVTEVCMEVGFSSLGSFSALFAQRIGVPPSAYRRRLRAMVQVPGKLPWELVPGCLPLMGRLPPDAFRSFREA
>CP012670.1|AUX23987.1|5951831_5953274_+|uncharacterized-protein
MKSAGYVVLFTIVGCSQGVCRGVGSAPGTAGPAGMVTSPGQAEVDAGAAEAGAAAQPDGAEQAALDEQLGPLRKGGRHVVAAPPDDAEARSYGAWVAAAARAAQERQAPPAAPAGFALRVLPGRDLWVLFEDGARRRGAVAVVLRVGPAAPLLVEAPHTFFDQGTLPLALAVFEAQRARALLINTSHRYGGRPRPGSGAPDEEGGAEGETTNEGGGGGGGGPRAVGDAGQDGGSGARAAADAKQDGGSGARAAADAKQDGGSGARAAADAKQDGRRAARAKGGGARAAGGGARTAGGGARAAGQGAQADGGGTREESVEARARAAAALAFADVAHAERSFFLSAHRALLQGFPGMPTVQLHGFQDSSAPDAAVIGSAVGQGADLDRLLDPLRAVLRDGKVQGKVLAFPADIDKLGGATNVQARWSRQVGAPFYHLELSRSLRDELIEDADLRRRFAGAFAQVAAGASRTGGAGCASNEAR
>CP012670.1|AUX23986.1|5950624_5951479_-|nucleoside-triphosphate-pyrophosphohydrolase
MPRPFEPVEAPPLAEQAGRTFPRLIELMQRLLAPDGCPWDREQTFATLRRYVLEEACEVIDAIDGGDRKELCAELGDLLLQVVFQAELARAEGAFGPDDVIAAICQKLVRRHPHVFADERAENTDEVLQNWERIKAAERAQQGKDRGVLGGVPRSLPALTRAQRVGEKVARVGFDWPDARGSRAKLDEELGELDRAFASGDHGAIEEELGDVLFALGNLARHAGVDAEGALRRTIDKFTRRFEHVERRVVERHGGWPTTAAGDTLTLEELDGYWDEAKRGERPA
>CP012670.1|AUX23985.1|5949564_5950560_+|cysteine-synthase
MSSPGVLGIGPSCAQEPHGEGSSTEPAAPVRVGPVVPDALSLIGGTPLVRLARVSPEGGGVLYGKLEAMNPGGSVKDRAALGMVLCAEREGALAKGSTIVEATSGNTGISLAMIAAVRGYRCVVVMPEDMSVERRHILRAYGAEIVLTPEREGMAGAVARAVEICEATPGAWTSRQFQNPANPDAHARATGVEILAQTGGDVAAFVAGVGTGGTLTGCGRVLREQLGGAVRICAVEPAKSAVLSGRGPGPHGIQGLGAGFVPAILDRSLIDEVLAVTDAAATRMVRRLAREEGLLVGPSSGANVHAAVEIARRVRGTVVTVLPDSGERYLL
>CP012670.1|AUX23984.1|5948669_5949530_+|uncharacterized-protein
MERPREGSGPRGSLQSSSGIIVRQSLRVLTLNIWNRQGPWETRLALIRKGLVDLAPDLIGLQEVLAHDGQSLADMIAEGLGYEVAFGAAHDLGGGVLFGNAVLSRWPIARTQVFPLPTGDTDERRSILFAEIGSPHGALPFFVTHLNWKFHHGAVREAQVVAVADVVMREAPMEGLPPVVVGDFNAQPESTEIRFLKGLHALDQKSVYFADTFDQTGAGPGFTYDPAQNPFAAITHEYPRRIDYIFVRGPDKRVRGKPLSSRVVFDEVVDGVAASDHYGVFSEISI
>CP012670.1|AUX23983.1|5948116_5948557_-|uncharacterized-protein
MIACAPRRWRPESASFRSRSPLRLPTTLLLPALLALLAGCESKMEPKECDTIRGDAFELVNKAQHCNTDADCRQSEWPGCAKPVSQATFEKIKPLAERYKTGKCEEPQVECKSPPESYCKQGLCVHRELGTTEGAGATPTDQIQIQ
>CP012670.1|AUX23982.1|5946978_5948013_-|NAD-dependent-dehydratase
MTRDPQGVTDAAVSEGFYRGKRAVVTGAGGFIGSHLVEALVREGARVRALVRYTSSSRRGHLDRLPEDALAEVEVVPGNVEDAGAVRSLVRGADVVFHLAALIGIPYSYVAPQQYVATNVQGTLNVLEAAREHGARVVHTSTSETYGTARYTPIDEAHPLTGQSPYSATKIGADKLAESYHLAFGLEVATIRPFNTYGPRQSSRAIIPSVMQQLAAGGAEIRIGSTAPVRDLNFVSDTVAGFLLVGASARAVGQTLNVGSGRAVSIGDLVRLIFEVTGKRAELVTDEARVRPDASEVMVLLADYRRAAELVGYAPRVTLEEGLARTYAYVERHLADYRPREYAI
>CP012670.1|AUX23992.1|5956436_5957981_-|inosine-5-monophosphate-dehydrogenase
MAFIYDEPSRTFGEYLLVPNLTTKDCVPANVDLTAPVVRFKADPSASPPDPRQAPLTINVPITSALMQSVSGAELAIALARCGGLSFIYGSQGIEEEAAMVRRVKNYKAGFVVSDSNLRPDATLGDVLAVTERTGHSTIAITEDGTPTGKFVGIITSRDYRLGKTPLGTPVREIMTPFRSIHCGKVGIDLEEANELIWRHKLNTLPVIDERQHLHYLVFRKDYESHQEHPLENVDREKRLIVGAGINSRDHEERVPALMEAGADVLCIDSSDGYSEWQRDTIAFVKSRYPHGYIGAGNVVDREGFLYLVEAGADFVKVGIGGGSICITREQKGIGRGQASAVIEVAKARDEYFRKTGIYVPICSDGGISQDYHITIALAMGADFIMMGRYFARFDEAPGRKVRVNNQFVKEYWGEGSNRARNWQRYDHGDTAKKKDQLEFEEGVDSYVPYAGKLKDNLDVTLAKVRSTMCNCGALTLRDLYMRARLTVASAVSIREGGVHDVMLKDTRTSPREA
>CP012670.1|AUX23993.1|5958132_5958348_+|uncharacterized-protein
MGGRRGATRAGGAAAEAPEDGGARAARARARRRSTPGPARPLAPGYRGMPSSWQVTLQPSPLLRFPSSHAS
>CP012670.1|AUX23994.1|5958266_5964659_-|hypothetical-protein
MSLRSSYLALAVGLLHVAAACGGGPSSTLVGDPGAGGAGGDMSSGGEGGSGGDDEFGLSVGVGAGVGGQGGAPDPCAGEDPPPECALPQEPACGDGKINQASEACDDGNSVPGDCCSGLCEIEPYCECPTPGEPCVLTIACGDGMLDPGEFCDDGNTVDGDGCSADCYVVDPSYVCPTPGEPCTLLYDCGDGRVNGSEECDDRNEVSGDGCDATCKREAGFVCPRPGQPCSRLPVCGNGDREPGEQCDDGNAVSGDGCSSLCRQEAFYDCATPGQPCELLIRCGDGVIDPGEICDDGNTMSGDGCSDACKVVDPLYACLVPGEPCVLLQWCGDGRVTGDEECDDGGGDPPASGDGCSADCKREPGFVCSRPGQACTRLPVCGNGLQESGEQCDDGNTASGDGCSSLCRQEALYSCPIPGQPCELQIRCGDGVVNPGEVCDDGNNVSGDGCSADCKAVEPNHGCPVAGQPCNVLQWCGDGRVNLDEECEDGDNPPASGDGCSADCKREPGFVCSRPGQACTRLPVCGNGLRESGEQCDDGNTAGGDGCSSLCRQEAFYTCATPGQPCELQIRCGDGVIDPGEICDDGNAVSGDGCSADCKAVEPNHGCPIAGQPCNVLQWCGDGRVNLDEECEDGDNPPASGDGCSADCKREPGFVCSRPGQPCTRLPVCGNGLRESGEQCDDGNTVGGDGCSNLCRQEAFYTCSTPGQPCELQIRCGDGVIHPGEVCDDGNAVGGDGCSADCKAVDPSFVCPDPGEPCNRLFACGDGRVNGGDACDDGNTVSGDGCSADCQLEEGWVCRPGRPCTERTYCGDGAVQVGEQCDDGNTAGGDGCTAQCRIELGWTCPPSGGPCTPPPSPECGDGMIGGEEQCDDGQVPLDGDGCSADCELEEGWDCSRVGFPCKTMCGDGLKRGAEQCDDGNEFPGDGCDASCRIELGRVCDDGEPQDCTGFSVCGDGIREGTEVCDDGNGDWRDGCTPDCKSEPDCSAGACTSRCGDGILLPGDPTEECDDGNSESGDGCSAECVIEAGYVCTTQPTEMRLPMVLRDFIGWCPQDYNFSSTANGACDANQRDGIRGHFDFEINPDGAQIDGTVLTTLDADGKPVNARGNGFFTPSNANGWTSGQDNFRWWYRDNPNYNRTFVTTIDLIETSPGTFVYEREPFWPLDPNPPGGDPALESLVASNLELAQNGDGGGRHNFYFTSEVRYWFQFNADPGAADPVLTFFGDDDVWVFINNTLTADIGGIHQRNQESVTIRDDGTALVTPCTENNCPRRNPYTVNLNLEHGRVYEIAVFQAERHVTGSNYQLTLGGFSAGTSVCTPECGVDPPVVTPGEECDDGSENGSGYGQCNDCRLGPYCGDGVRNGPEECDNGVNNSTYANASGLCAPGCVLPPRCGDGQVNAPYEACDLGSGNTEDGYNGCTTSCQIGPSCGDGVVNDDEQCDDGINDGAYGTCNPSCTWAPSCGDSRVDAEWGEECDDPSDPTCVHCRIGEHCGDGVTQPAYGEECDDGVNDGGYGQCGPSCVYGPRCGDGIVQPGEESCDLGDGRNTGEYGGCDATCKYGPYCGDGSINGAETCDDGVNDGTYGTCSPSCTPAPRCGDGSVDADWGEECDANDPSCVNCRIATHCGDGITQPQFNEECDDGINDGGYGQCGPSCVYGPRCGDGIVQPGEENCDLGDGRNTGEYGGCDATCKYAPYCGDGIRNGLEACDDGVNDGTYGTCTPGCTPAPRCGDGSVDADWGEECDANDPSCVNCRIATHCGDGITQPQFNEECDDGVNDGGYGQCGPACVYGPRCGDGIVQPGEEDCDLGDGNNTGVYGGCDAACKYAPYCGDGIRNGPEACDDGVNDGTYGTCAPGCAPAPRCGDSRVDADWGEECDDPDDPSCVSCRRAAHCGDGVLQPQFNEECDDGINDGGYGQCGPGCVYGPRCGDGIVQPSEEDCDLGDGKNTGEYGGCNVLCQYGPYCGDGIVNGAETCDDGVNDGFYGSCMPDCTPAAKCGDRRVDEEWGEQCDPPNEAAGCSNNCRLGAQCGDGVVQAGEQCDDGENDGGYGECGPRCQLGPRCGDGIRNGEEQCDDGDGHNTGGYGKCAPGCVYGPFCGDGKVQSPYEACDDGNRKSGDGCSVTCQLDGIPR
>CP012670.1|AUX23995.1|5965039_5966743_+|hypothetical-protein
MRLLVSIDSWGARLLSVLALAPAVGCDINVTSGESSSGSTGGTSVGSTGGTSVGSTGGTSVGSTGGTSVGSTGGTSVGSTGGTSVGSTGGTSVGSAGGSSSGDAPFPCDDPEPILVAGQNTGYVRCAGGWMHRAEVVTCPSAIPRATACQDKDPSGAPGGCSTDADCTDQPNGYCKSAEGGEALPGCFCAYGCTTDADCGEGQICLCGDPVGQCVPASCESDQDCGSLLCSSHVLLPGCGGTGFACQTPSDECASDEDCAGDMQCSLEAGMHACSEQICAIGRPFLVDGVVRTAAPAARDDWRAGAAADRGAPPRLDALSAGQRAALAEHWTRAALLEHASIAAFARFALQLLSLGAPPGLVAATQAAMGDEAEHARLCFELASAFGGRDVGPGPLAIDGALGGADAREILVTAVREGCIGETIAAIEAAEAALHATDPAVRRALEKIAEDESRHAELAFRFAAWAIERDPALADALVDEVAASAAGAPAAGEAEDGGPLLGFGVLSPWQRRAIRERALSQVVTPCARALLARASHRGGRRAPRPPAGPRREEGDQREEIESFATKS
>CP012670.1|AUX23996.1|5966703_5968185_-|hypothetical-protein
MARLRFERRLLLSSALIAAGGAGCAEIAGLRYIDEQGAGGGSFSGPGYTCQWALSFGDAETTLGGIAADGDGTLWLAGGFKGDIAVAGGAPLTAGGAGTDVFVAHLARDGNHLFSERFGNAANDAATRAHQATAIAVGEIGVYVAGDFTGSLSFGADCPLPAHAGGGALFVAKLDRRDPGGHAACATHGENGRDTARAVAVDGDRVVVLTSLQGGARMGLSSFDGQTLTRPCHGAFPGLDGGRLSPRGLRVSAGEAFVIAEFQGRIELGFSSPRDALPPGGAPAMGVDSFLASFPAAWICDGSSDGGGRLRHRHYSSLPGDQRASAVALRDGGVVLGGSFDGEIDVSGEPGGRLVSSGGDGFLAHLDGEGGLRWARQLGGAADQSVAFVEADSAGDVVVAGHFQERMTVGDGAELAGAADEDIYLARLGGEDGAIAWLGGLGGPEGQRLQALAVSGTDLFLAGRSDADFELLNCPVEAGGGQLFVAKLSISSR
>CP012670.1|AUX23997.1|5968184_5968871_-|uncharacterized-protein
MPLADHPGNSMLEETCRGGARRPIDLRGAGRAAHRGSGRGVAGRAALGLLAALAASAPAVAVRADEARGGAVSPPGEHARIAIAAGGLDEEAPASSSLGRPWPTPLGTRPDPLHRNLMWVTGGLTLAGIALGSTFGGLAITTWNEVERTAGTSCSSPARYQGCARPVPQLARRAMSYATISDFSFIAAGAALAGTTVLWLTVPPDSPGAGPRVQIVPGVLGGSVVGVF
>CP012670.1|AUX23998.1|5969144_5970185_+|hypothetical-protein
MSSVPAVKKKRSRKGEPPLPRRDEAWIGGFFSLRAFVREGDDAYRPEAVVWMTDRGLVLSCTTLRPGDVVACAVDSFESTAREPREGEPGLPARVRVASPALADALRARLGPGVDVRVAPTPEIDAVAEDLEAHLGAGDGGPSPSFLGGGIEAPAMASFFRAAAALHRAAPWEAVPSDTDILSLSIPSLGARDLALCVLGQAGQGHGVLLFESARGFELHLAALEAPRDRPPTSLPAGFFSLSFDRASDLHPALRAEVAEQRWELVGPDAVPTLAMVDEDLLGRKPTPQELTASEALALGLVELMKRRDELAQAFRGGAPVEASYVVETHGGPVEVMFRAPHPERG
>CP012670.1|AUX23999.1|5970227_5970767_-|phosphopeptide-binding-protein
MPTFATLVTQCRALSQMAFERRYPHAWLLREASADELGAPCFKTAFGCTSPGTSCQPTPLRHRISSAMTAASFERCELLPVTKRPDSPWQDRILIGRALNSDIVLRDPSVSKVHAHISVLGPDAPTLHARKSTNGTFLNDRLLSPAGDGVPLQSGDILQLGNVVCELIVSADVYRLAAR
>CP012670.1|AUX24000.1|5971025_5973167_+|beta-xylosidase
MYVGDVSSSYNVQHAPVGAFASFTLGSHHRRGGFASQVGRPGQSNLYIGYREGESDLCCLPYFEATHDPSTVPFGVTLERPKRPRRVFDDRDIRRELGWASDTIRAGRLTLTIFSPFGPIPDPRTAPAAEVALRSCPAVLARLELDNTGGTEPLTGFFALDAASLRDLESTSDGRLIGVAHGRRWGFASRPEPGVRAFQAFSIENAFDGSADRLFRLGKVGGLLVEVPPGARREVWIALGFHDAGVITTGIEARYAYTRHHRGLEEVLSFALDHREALLREAAQRDEELSRAPLSPPQKWLLAQATHGYFGSTQWLDTALEDGAPPAPLWNVNEGEYEMMNTFDLAIDHLFFELRYAPWAVRNVLDLYVDRYSYRDGVKRPGAPGELLPGGVSFTHDMGVSNHFSPPGYSSYERPNLDAACFSYMTYEQLTNWICCAGVYVARTGDEGFLARHRGLLAELLTSLLHRDAPEPDARGGVMALDSSRCGAGAEITTYDSLDHSLGRARSNLYLAGKSWASYVILAHLLERCGDAALAAEASAASRKAARAITSAFHEPSGYIPALLDGSCTSAIIPAIEGLLYPHAMGLLSSDAAEGEHGELLRVLRRHLQAVLKPGLCLFPEGGWKLSSSSDNSWMSKIALCQHIARALLKVEEPDAGRHDEAHVRWQIEGSGYWAFSDQMQRGVPVGSRYYPRGVTAILWLDEPSPAPGAKGR
>CP012670.1|AUX24001.1|5973176_5974232_-|anti-sigma-factor-antagonist
MTQSRPSLTIDDVPIAWRFDDGDLLFGGLSSVLFWANPSLFRMLSPLVEEIGTDLFRLLVARSSSLGTAEDYRDVVRLGETFEQGFLSWGRLVSMAGWGAFELPAFERAACAATVRVRNAWELRMQAAGGMRWGCPFLQGKVIGIFGRALEQRCWADEHIVSEGAEPVVEFRVHASDRTIEDELHRLRLARLRARQAELTQHMAAAALELRRKDEEVEQKERLIRALSAPIIQVWDGVLAVPLVGVLSRERAAPICEELLDRVTSMSATHVLLDLTGLSEVDAAATGQIAAIVSSLRLLGARCAVVGLSPQLARTMVELGISFAGVRTYQTLADALRQVVGLTRGPARRSF

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Crispr_ID: CP012670_31

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_31

5976613-5976702

Orphan

Consensus_repeat	Method
TGCCCGGACCCGACCCAGGTTGCCCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_31

>merge|CP012670|31|5976613-5976702|CRISPRCasFinder
TGCCCGGACCCGACCCAGGTTGCCCGGACCCGACCCAGGTGGCTGCCCGGACCCGACCCAGGTTGCCCGGCCCCGACCCAGGTTGCCCGG

>CP012670|31|28|5976613-5976702|CRISPRCasFinder
TGCCCGGACCCGACCCAGGTTGCCCGG	ACCCGACCCAGGTGGCTGCCCGGACCCGACCCAGGT
TGCCCGGCCCCGACCCAGGTTGCCCGG

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX24001.1\|5973176_5974232_-\|anti-sigma-factor-antagonist	unknown	unknown	gnl\|CDD\|132912
CP012670.1\|AUX23994.1\|5958266_5964659_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|162730
CP012670.1\|AUX23998.1\|5969144_5970185_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX24006.1\|5978695_5979178_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX24010.1\|5983046_5984579_-\|outer-membrane-protein	unknown	unknown	gnl\|CDD\|224455
CP012670.1\|AUX23999.1\|5970227_5970767_-\|phosphopeptide-binding-protein	unknown	unknown	gnl\|CDD\|366133
CP012670.1\|AUX24008.1\|5981081_5981813_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
CP012670.1\|AUX24004.1\|5976725_5977937_-\|anti-anti-sigma-factor-protein	unknown	unknown	gnl\|CDD\|132912
CP012670.1\|AUX23995.1\|5965039_5966743_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|153097
CP012670.1\|AUX24012.1\|5985358_5986711_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236532
CP012670.1\|AUX24013.1\|5989250_5989877_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX24009.1\|5981814_5983050_-\|hemolysin-D	unknown	unknown	gnl\|CDD\|273776
CP012670.1\|AUX24011.1\|5984651_5985362_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|223816
CP012670.1\|AUX24000.1\|5971025_5973167_+\|beta-xylosidase	unknown	unknown	gnl\|CDD\|367535
CP012670.1\|AUX24002.1\|5974683_5975442_-\|short-chain-dehydrogenase	unknown	unknown	gnl\|CDD\|212491
CP012670.1\|AUX23997.1\|5968184_5968871_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX24005.1\|5978075_5978696_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379195
CP012670.1\|AUX24007.1\|5979885_5981088_-\|membrane-protein	unknown	unknown	gnl\|CDD\|182528
CP012670.1\|AUX23996.1\|5966703_5968185_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX24003.1\|5975518_5976568_-\|dehydrogenase	unknown	unknown	gnl\|CDD\|341453

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX24001.1\|5973176_5974232_-\|anti-sigma-factor-antagonist	gnl\|CDD\|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	5.63489e-40
CP012670.1\|AUX24010.1\|5983046_5984579_-\|outer-membrane-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	1.32251e-16
CP012670.1\|AUX23994.1\|5958266_5964659_-\|hypothetical-protein	gnl\|CDD\|162730	TIGR02148, ORFveg106_random, fibro-slime domain. This model represents a conserved region of about 90 amino acids, shared in at least 4 distinct large putative proteins from the slime mold Dictyostelium discoideum and 10 proteins from the rumen bacterium Fibrobacter succinogenes, and in no other species so far. We propose here the name fibro-slime domain.	1.55297e-17
CP012670.1\|AUX23999.1\|5970227_5970767_-\|phosphopeptide-binding-protein	gnl\|CDD\|366133	pfam00498, FHA, FHA domain. The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.	1.06875e-17
CP012670.1\|AUX24008.1\|5981081_5981813_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	1.16368e-106
CP012670.1\|AUX24004.1\|5976725_5977937_-\|anti-anti-sigma-factor-protein	gnl\|CDD\|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	2.17329e-33
CP012670.1\|AUX23995.1\|5965039_5966743_+\|hypothetical-protein	gnl\|CDD\|153097	cd00657, Ferritin_like, Ferritin-like superfamily of diiron-containing four-helix-bundle proteins. Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterioferritin, ferritin, rubrerythrin, aromatic and alkene monooxygenase hydroxylases (AAMH), ribonucleotide reductase R2 (RNRR2), acyl-ACP-desaturases (Acyl_ACP_Desat), manganese (Mn) catalases, demethoxyubiquinone hydroxylases (DMQH), DNA protecting proteins (DPS), and ubiquinol oxidases (AOX), and the aerobic cyclase system, Fe-containing subunit (ACSF).	1.62652e-11
CP012670.1\|AUX24012.1\|5985358_5986711_+\|hypothetical-protein	gnl\|CDD\|236532	PRK09470, cpxA, envelope stress sensor histidine kinase CpxA.	2.39273e-74
CP012670.1\|AUX24009.1\|5981814_5983050_-\|hemolysin-D	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	1.32554e-44
CP012670.1\|AUX24011.1\|5984651_5985362_+\|transcriptional-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	8.55339e-81
CP012670.1\|AUX24000.1\|5971025_5973167_+\|beta-xylosidase	gnl\|CDD\|367535	pfam03512, Glyco_hydro_52, Glycosyl hydrolase family 52.	0
CP012670.1\|AUX24002.1\|5974683_5975442_-\|short-chain-dehydrogenase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	3.69351e-44
CP012670.1\|AUX24005.1\|5978075_5978696_-\|hypothetical-protein	gnl\|CDD\|379195	pfam13453, zf-TFIIB, Transcription factor zinc-finger.	0.00312288
CP012670.1\|AUX24007.1\|5979885_5981088_-\|membrane-protein	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	1.60042e-87
CP012670.1\|AUX24003.1\|5975518_5976568_-\|dehydrogenase	gnl\|CDD\|341453	cd08174, G1PDH-like, Glycerol-1-phosphate dehydrogenase-like. These glycerol-1-phosphate dehydrogenase-like proteins have not been characterized. The protein sequences have high similarity with that of glycerol-1-phosphate dehydrogenase (G1PDH) which plays a role in the synthesis of phosphoglycerolipids in Gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires Ni++ ion.	2.81969e-142

>CP012670.1|AUX24003.1|5975518_5976568_-|dehydrogenase
MLAATQIGIPTLVRIKPGALARTGLYLARAAYRRIALLSSEAMPPAIAAAMQEGLDGQGIEVVARREVRAASFEEAAALLPALPGRCDAVVGLGGGRALDIAKYLAFLARLPFLAAPTSLSNDGFCSPSASLTVAGRRRSLPCAVPFGVVVDTEVCLRAPEILWLSGVGDLVAKVTAVHDWKLAFHARGEPVNDFAALLSDATVFQFMARPARDLEGMRLLATALMLNGIAMEIAGSSRPASGSEHLISHALDQTGRRPRLHGLQVGTAAYVVSRLQGRDTDPIAAVLDATRFWDAIRADPFSLDEWLEAVRVAPEIKHGVYTVLSSRDCVPEVESILRTDPRLHGCFA
>CP012670.1|AUX24002.1|5974683_5975442_-|short-chain-dehydrogenase
MQVGLCHKARLMTTELRGKWALVTGASRGVGKQIARGLAGLGCNLVLHSRDAAHTRELEAELAGQGVRVSSVSGELSEQAAVDRMLDSAITVSGGIDILYNNAAIMTPFRASYIETPAEDFRLSFEVNVITPIRITYRLLPTMLERRWGRIVQVTSGIQDQPELMAYAASKAALDKFVRDTVPSLRGTGVLMNLLDPGWLRTDLGGPRAPNAVESVLPGALVPALVDGEVHGVFFRAQDHARPAATSGASST
>CP012670.1|AUX24001.1|5973176_5974232_-|anti-sigma-factor-antagonist
MTQSRPSLTIDDVPIAWRFDDGDLLFGGLSSVLFWANPSLFRMLSPLVEEIGTDLFRLLVARSSSLGTAEDYRDVVRLGETFEQGFLSWGRLVSMAGWGAFELPAFERAACAATVRVRNAWELRMQAAGGMRWGCPFLQGKVIGIFGRALEQRCWADEHIVSEGAEPVVEFRVHASDRTIEDELHRLRLARLRARQAELTQHMAAAALELRRKDEEVEQKERLIRALSAPIIQVWDGVLAVPLVGVLSRERAAPICEELLDRVTSMSATHVLLDLTGLSEVDAAATGQIAAIVSSLRLLGARCAVVGLSPQLARTMVELGISFAGVRTYQTLADALRQVVGLTRGPARRSF
>CP012670.1|AUX24000.1|5971025_5973167_+|beta-xylosidase
MYVGDVSSSYNVQHAPVGAFASFTLGSHHRRGGFASQVGRPGQSNLYIGYREGESDLCCLPYFEATHDPSTVPFGVTLERPKRPRRVFDDRDIRRELGWASDTIRAGRLTLTIFSPFGPIPDPRTAPAAEVALRSCPAVLARLELDNTGGTEPLTGFFALDAASLRDLESTSDGRLIGVAHGRRWGFASRPEPGVRAFQAFSIENAFDGSADRLFRLGKVGGLLVEVPPGARREVWIALGFHDAGVITTGIEARYAYTRHHRGLEEVLSFALDHREALLREAAQRDEELSRAPLSPPQKWLLAQATHGYFGSTQWLDTALEDGAPPAPLWNVNEGEYEMMNTFDLAIDHLFFELRYAPWAVRNVLDLYVDRYSYRDGVKRPGAPGELLPGGVSFTHDMGVSNHFSPPGYSSYERPNLDAACFSYMTYEQLTNWICCAGVYVARTGDEGFLARHRGLLAELLTSLLHRDAPEPDARGGVMALDSSRCGAGAEITTYDSLDHSLGRARSNLYLAGKSWASYVILAHLLERCGDAALAAEASAASRKAARAITSAFHEPSGYIPALLDGSCTSAIIPAIEGLLYPHAMGLLSSDAAEGEHGELLRVLRRHLQAVLKPGLCLFPEGGWKLSSSSDNSWMSKIALCQHIARALLKVEEPDAGRHDEAHVRWQIEGSGYWAFSDQMQRGVPVGSRYYPRGVTAILWLDEPSPAPGAKGR
>CP012670.1|AUX23999.1|5970227_5970767_-|phosphopeptide-binding-protein
MPTFATLVTQCRALSQMAFERRYPHAWLLREASADELGAPCFKTAFGCTSPGTSCQPTPLRHRISSAMTAASFERCELLPVTKRPDSPWQDRILIGRALNSDIVLRDPSVSKVHAHISVLGPDAPTLHARKSTNGTFLNDRLLSPAGDGVPLQSGDILQLGNVVCELIVSADVYRLAAR
>CP012670.1|AUX23998.1|5969144_5970185_+|hypothetical-protein
MSSVPAVKKKRSRKGEPPLPRRDEAWIGGFFSLRAFVREGDDAYRPEAVVWMTDRGLVLSCTTLRPGDVVACAVDSFESTAREPREGEPGLPARVRVASPALADALRARLGPGVDVRVAPTPEIDAVAEDLEAHLGAGDGGPSPSFLGGGIEAPAMASFFRAAAALHRAAPWEAVPSDTDILSLSIPSLGARDLALCVLGQAGQGHGVLLFESARGFELHLAALEAPRDRPPTSLPAGFFSLSFDRASDLHPALRAEVAEQRWELVGPDAVPTLAMVDEDLLGRKPTPQELTASEALALGLVELMKRRDELAQAFRGGAPVEASYVVETHGGPVEVMFRAPHPERG
>CP012670.1|AUX23997.1|5968184_5968871_-|uncharacterized-protein
MPLADHPGNSMLEETCRGGARRPIDLRGAGRAAHRGSGRGVAGRAALGLLAALAASAPAVAVRADEARGGAVSPPGEHARIAIAAGGLDEEAPASSSLGRPWPTPLGTRPDPLHRNLMWVTGGLTLAGIALGSTFGGLAITTWNEVERTAGTSCSSPARYQGCARPVPQLARRAMSYATISDFSFIAAGAALAGTTVLWLTVPPDSPGAGPRVQIVPGVLGGSVVGVF
>CP012670.1|AUX23996.1|5966703_5968185_-|hypothetical-protein
MARLRFERRLLLSSALIAAGGAGCAEIAGLRYIDEQGAGGGSFSGPGYTCQWALSFGDAETTLGGIAADGDGTLWLAGGFKGDIAVAGGAPLTAGGAGTDVFVAHLARDGNHLFSERFGNAANDAATRAHQATAIAVGEIGVYVAGDFTGSLSFGADCPLPAHAGGGALFVAKLDRRDPGGHAACATHGENGRDTARAVAVDGDRVVVLTSLQGGARMGLSSFDGQTLTRPCHGAFPGLDGGRLSPRGLRVSAGEAFVIAEFQGRIELGFSSPRDALPPGGAPAMGVDSFLASFPAAWICDGSSDGGGRLRHRHYSSLPGDQRASAVALRDGGVVLGGSFDGEIDVSGEPGGRLVSSGGDGFLAHLDGEGGLRWARQLGGAADQSVAFVEADSAGDVVVAGHFQERMTVGDGAELAGAADEDIYLARLGGEDGAIAWLGGLGGPEGQRLQALAVSGTDLFLAGRSDADFELLNCPVEAGGGQLFVAKLSISSR
>CP012670.1|AUX23995.1|5965039_5966743_+|hypothetical-protein
MRLLVSIDSWGARLLSVLALAPAVGCDINVTSGESSSGSTGGTSVGSTGGTSVGSTGGTSVGSTGGTSVGSTGGTSVGSTGGTSVGSTGGTSVGSAGGSSSGDAPFPCDDPEPILVAGQNTGYVRCAGGWMHRAEVVTCPSAIPRATACQDKDPSGAPGGCSTDADCTDQPNGYCKSAEGGEALPGCFCAYGCTTDADCGEGQICLCGDPVGQCVPASCESDQDCGSLLCSSHVLLPGCGGTGFACQTPSDECASDEDCAGDMQCSLEAGMHACSEQICAIGRPFLVDGVVRTAAPAARDDWRAGAAADRGAPPRLDALSAGQRAALAEHWTRAALLEHASIAAFARFALQLLSLGAPPGLVAATQAAMGDEAEHARLCFELASAFGGRDVGPGPLAIDGALGGADAREILVTAVREGCIGETIAAIEAAEAALHATDPAVRRALEKIAEDESRHAELAFRFAAWAIERDPALADALVDEVAASAAGAPAAGEAEDGGPLLGFGVLSPWQRRAIRERALSQVVTPCARALLARASHRGGRRAPRPPAGPRREEGDQREEIESFATKS
>CP012670.1|AUX23994.1|5958266_5964659_-|hypothetical-protein
MSLRSSYLALAVGLLHVAAACGGGPSSTLVGDPGAGGAGGDMSSGGEGGSGGDDEFGLSVGVGAGVGGQGGAPDPCAGEDPPPECALPQEPACGDGKINQASEACDDGNSVPGDCCSGLCEIEPYCECPTPGEPCVLTIACGDGMLDPGEFCDDGNTVDGDGCSADCYVVDPSYVCPTPGEPCTLLYDCGDGRVNGSEECDDRNEVSGDGCDATCKREAGFVCPRPGQPCSRLPVCGNGDREPGEQCDDGNAVSGDGCSSLCRQEAFYDCATPGQPCELLIRCGDGVIDPGEICDDGNTMSGDGCSDACKVVDPLYACLVPGEPCVLLQWCGDGRVTGDEECDDGGGDPPASGDGCSADCKREPGFVCSRPGQACTRLPVCGNGLQESGEQCDDGNTASGDGCSSLCRQEALYSCPIPGQPCELQIRCGDGVVNPGEVCDDGNNVSGDGCSADCKAVEPNHGCPVAGQPCNVLQWCGDGRVNLDEECEDGDNPPASGDGCSADCKREPGFVCSRPGQACTRLPVCGNGLRESGEQCDDGNTAGGDGCSSLCRQEAFYTCATPGQPCELQIRCGDGVIDPGEICDDGNAVSGDGCSADCKAVEPNHGCPIAGQPCNVLQWCGDGRVNLDEECEDGDNPPASGDGCSADCKREPGFVCSRPGQPCTRLPVCGNGLRESGEQCDDGNTVGGDGCSNLCRQEAFYTCSTPGQPCELQIRCGDGVIHPGEVCDDGNAVGGDGCSADCKAVDPSFVCPDPGEPCNRLFACGDGRVNGGDACDDGNTVSGDGCSADCQLEEGWVCRPGRPCTERTYCGDGAVQVGEQCDDGNTAGGDGCTAQCRIELGWTCPPSGGPCTPPPSPECGDGMIGGEEQCDDGQVPLDGDGCSADCELEEGWDCSRVGFPCKTMCGDGLKRGAEQCDDGNEFPGDGCDASCRIELGRVCDDGEPQDCTGFSVCGDGIREGTEVCDDGNGDWRDGCTPDCKSEPDCSAGACTSRCGDGILLPGDPTEECDDGNSESGDGCSAECVIEAGYVCTTQPTEMRLPMVLRDFIGWCPQDYNFSSTANGACDANQRDGIRGHFDFEINPDGAQIDGTVLTTLDADGKPVNARGNGFFTPSNANGWTSGQDNFRWWYRDNPNYNRTFVTTIDLIETSPGTFVYEREPFWPLDPNPPGGDPALESLVASNLELAQNGDGGGRHNFYFTSEVRYWFQFNADPGAADPVLTFFGDDDVWVFINNTLTADIGGIHQRNQESVTIRDDGTALVTPCTENNCPRRNPYTVNLNLEHGRVYEIAVFQAERHVTGSNYQLTLGGFSAGTSVCTPECGVDPPVVTPGEECDDGSENGSGYGQCNDCRLGPYCGDGVRNGPEECDNGVNNSTYANASGLCAPGCVLPPRCGDGQVNAPYEACDLGSGNTEDGYNGCTTSCQIGPSCGDGVVNDDEQCDDGINDGAYGTCNPSCTWAPSCGDSRVDAEWGEECDDPSDPTCVHCRIGEHCGDGVTQPAYGEECDDGVNDGGYGQCGPSCVYGPRCGDGIVQPGEESCDLGDGRNTGEYGGCDATCKYGPYCGDGSINGAETCDDGVNDGTYGTCSPSCTPAPRCGDGSVDADWGEECDANDPSCVNCRIATHCGDGITQPQFNEECDDGINDGGYGQCGPSCVYGPRCGDGIVQPGEENCDLGDGRNTGEYGGCDATCKYAPYCGDGIRNGLEACDDGVNDGTYGTCTPGCTPAPRCGDGSVDADWGEECDANDPSCVNCRIATHCGDGITQPQFNEECDDGVNDGGYGQCGPACVYGPRCGDGIVQPGEEDCDLGDGNNTGVYGGCDAACKYAPYCGDGIRNGPEACDDGVNDGTYGTCAPGCAPAPRCGDSRVDADWGEECDDPDDPSCVSCRRAAHCGDGVLQPQFNEECDDGINDGGYGQCGPGCVYGPRCGDGIVQPSEEDCDLGDGKNTGEYGGCNVLCQYGPYCGDGIVNGAETCDDGVNDGFYGSCMPDCTPAAKCGDRRVDEEWGEQCDPPNEAAGCSNNCRLGAQCGDGVVQAGEQCDDGENDGGYGECGPRCQLGPRCGDGIRNGEEQCDDGDGHNTGGYGKCAPGCVYGPFCGDGKVQSPYEACDDGNRKSGDGCSVTCQLDGIPR
>CP012670.1|AUX24004.1|5976725_5977937_-|anti-anti-sigma-factor-protein
MGVRYQCVRDGLYRRMRHRHDMMSLDQRFAALELSILPTWVYDHDAYRFRWANAKAMEFWRASDRDELLSRDLSDISGATRARLDGYLRVVAEGGTVVEDWTLYPRGAPVTVTLDGQGIRLDDGRLAILFQALPRQPGVDASMVRGVEAVRHSSVLVSLVDGEGTVLFHNPAALRALGDAPRIDAAFPDEAVGAAIRGVIAAEEPWTGEVRVHTTGGERWHQVEARRTTDPVTGVPAVLVQQLDVSAQRRAEGQVEEQGRLIEELNRSLALVEEQRQQILTLSAPILDVGCGTLAVPLIGRLDAERGDELGERLLPAIVARRASHVVLDVTGADALDPDGAAALERLSRAITLLGARPILTGVRPEVARALVHTDLTDGLLVLRSLGHGLEASRERSTARRRA
>CP012670.1|AUX24005.1|5978075_5978696_-|hypothetical-protein
MLRCGGCYLANAPDAERCAGCGHELGLEPIAEPDTRRCLDCDEPFAVFRAPAGLLRDCRRCGGQLVEHALLRDLLSHRESYGASAPRPPPRQRVDVRVRYVRCPICGDVMNRKNFAGKSGVIVDICREHGTWFDRGELPELLSFAASGGTARARQEQLEEEARARRQAEIERDTAKRASFVVTASTWEARRTAVQELRDLLWAITR
>CP012670.1|AUX24006.1|5978695_5979178_-|hypothetical-protein
MTVLLQNEYLTVTADPDRSLVRTTRSEIALPSPDEFIRVHTEALQIYESLVRGRLGHLVDLRQVPMNNDPAFEAATQRIRGMLVQDFAAVALVVRTAVGALQVKRLVRETHSDNVVIFHDEDAAMAFLAEVLGARASRISLLPGGPARSTRPPARTAKGR
>CP012670.1|AUX24007.1|5979885_5981088_-|membrane-protein
MLIRETARSAWRSLASNRLRTLLTMLGMIIGTAAVVAVLGIGEGARSSVEGRIRSLGANLLMVRPSFASAGGVRSGSVRTLTRKDAEALEALLGVAAVAPEASGSAQLRYMASNLNASVTGITPAYLEVRSISVASGVSFSDLDEQQRARVALIGANVARQLYPGMSPLGTRLQINGSAFRVVGVLAEKGSGMGSPDDGVFVPLSTHQSSLFGQDFLSTISLQLEREDQADQVIARLTQLLRLRHRLRADQEDDFDVRSQAEMLATMGQITGTFTTLLGSVAAVSLIVGGIGIMNIMLVSVRERTREIGVRMAVGARRRDILRQFLVEAVVVSLAGGVAGVGLGYAAAILLSRFGQWATIVPPYAIGLALGVSVLIGITFGVGPARRAARLDPVEALRFE
>CP012670.1|AUX24008.1|5981081_5981813_-|ABC-transporter-ATP-binding-protein
MDIPVKVEGLSKVYHADREDLAVRAVDRISFDVRRGESVAIIGPSGCGKSSLLNILGCLDRPTEGTYRLGGRDMAELDDDELAGLRNRHIGFVFQSFNLLPRMTAVENVELPLLYGAVKDSRALAQRALARVGLAARERHLPAELSGGQRQRVAIARAIVTRPSILLCDEPTGALDSRTGRDVLELLLSLNADGTTLVMVTHDLGVARSLSRAIHMKDGRIVADGPAGAVVAAFHASEMEAAC
>CP012670.1|AUX24009.1|5981814_5983050_-|hemolysin-D
MNRNRKRQVMAAVAAAIVATFAIGGYAWYREPSKAPAGPTVEIRRGSLTETAAASGKIEPDVQVEVKSRASGQVIEVLVQEGDTVEAGQLLVRLDPTDAERALAEARVTRDRVRADLAAAQASLKAAELERKNNEVSQEVAERSAELGLGSTDAARTAAHTTSVAAANLTLRRAQLSAAQAQLKVAEFAVQDAETRLKEMQIYAPIAGTVLDVAVEKGTLVSSALTNVSGGSAVMTLADLSNLRIIGAIDEAQIGRVAPGQRVEIRVDAYGDRVFQGVVDRVSPLGKEASSVVTFDVEIVVKDKDASLLRSGMSADVEIVTAEQKDVLLVPLLAVQSQGKRRFVRLESGEERTIRTGATDGTHMVVLEGLSEGDDVLASAPMATEPGPPGQPRGGQNPMRGMRMGAPRGGR
>CP012670.1|AUX24010.1|5983046_5984579_-|outer-membrane-protein
MNRTPLETRLPSLGLMTLTRSVPLPWLASLALIAACSLSSAARAETLSAEEAVGRAASQNPSLRAALLDATAARQAVAAEEGARRPALAASVTGQYAKTLDAQTPRAGSASVESSVALRYTTDVGTALEVGTSADSRWNLAEDRTLGPAYGARAYVSARQPLLRGAGADAVLAPAAQAQAQAVAAERERDLAASQIALEVLQAYWELWYAEQAVAVQEQALAAAERQVNDARARAETLGTGTRVDVLQFSTAAASIADALSQARAARTERAIELGRALGMDPVRAASLRATGAPPSLGPAPPAAALARAAAERSQELAAMRADLDALRARVGAAEDADQVRLDVFATASAGTEWGNDLLTGRSLPGMQPAFSVLGGLDLELPFGGGRAAADAARARAQLAAAEARYRARLDAITAQISALRVSLDASADQVALASETARMAGELAEAERQRLLLGTSTSADVVKAEQTLREAELRKLRAAVSELTSRFQLEHAAGALLERFASVLPRRSS
>CP012670.1|AUX24011.1|5984651_5985362_+|transcriptional-regulator
MADPAQILVIDDDAELCELLAELLGQEGYAVESARDAATGLARAQERAFTLVVLDVMLPGMNGFEVLTRLRQSSRVPVLMLTARGEDVDRIVGLEMGADDYLPKPFNPRELVARVRALHRRAMATAAPGPADAQSVLTVDDLELLPSARRVRVRGEDVRLTTAEYDLLEVLVRQAGAVVSREELARRVLGRRLAAYDRGIDMHVSNLRKKLGPGPSGGERIKTVRNAGYILARERP
>CP012670.1|AUX24012.1|5985358_5986711_+|hypothetical-protein
MRSLFLRLLVSLWLAMALLGGLFAVIHARAFPAEASSLRRRLSLRTIELRAERALACAEDGRAGCDEILAPIDPRDLRVAVYRAGELVAGRAIEGARGVAEQARRAGDGVAVEIGEQELTAVVLRRDPSLAAVAVGPVRSPWVFFIMPDTLPYRLLAIITVTGLVAVVLARYLSRPIRVLRGATQRMAAGDLSVRVAERLTGADSETLALGRDMDRMAERIEELLETQRRLLCDVSHELRSPLARLNIALELVRRRSPPDVEPAFDRIERETERLNGMIGELLTLSRLESGRPMERTERIDLLSLVEQVVEDAAFEAEQRGCGVALGARRACSLDGNEELLRRAIENVLRNAVRFTEAGTTVEVDLERAGDAAELRVRDRGPGVPEAALDDIFKPFYRVDEHRARGAGGTGIGLAITHQAVLLHGGEVGARNAEGGGLVVTLRLPVVSEG
>CP012670.1|AUX24013.1|5989250_5989877_-|uncharacterized-protein
MKLISTDPSEIGIVSVGQFAHGIFAFGQFARGFIAIGQVAIGVVAVGQISFSVLGAGQAGGGIAWFAGMVGVGGRGVCLRLIPGLDLPRDPPPVVPLDAAMRGEVRGFVRAEVVDGPNGAKLASGGHVLPVKMSPGLLGALTDARRAGKVSEIFAHLGRIGDVVVCDRLMEVPGARPRQFPLAFHVVRFLLLVALATGWWYAFTQMEG

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Crispr_ID: CP012670_33

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_33

6118216-6118295

Orphan

Consensus_repeat	Method
CCGGGCGCCCCGGCGCTCTACCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_33

>merge|CP012670|33|6118216-6118295|CRISPRCasFinder
CCGGGCGCCCCGGCGCTCTACCCGCCGAGCCCGGGCTTTGGCGCCGCGGCCTGGGTCCCGGGCGTCCCGGCGCTCTACCC

>CP012670|33|30|6118216-6118295|CRISPRCasFinder
CCGGGCGCCCCGGCGCTCTACCC	GCCGAGCCCGGGCTTTGGCGCCGCGGCCTGGGTC
CCGGGCGTCCCGGCGCTCTACCC

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX24103.1\|6107427_6107841_-\|globin	unknown	unknown	gnl\|CDD\|381282
CP012670.1\|AUX24108.1\|6112389_6113559_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|240291
CP012670.1\|AUX24110.1\|6114348_6115833_-\|type-VI-secretion-protein-EvpB	unknown	unknown	gnl\|CDD\|274538
CP012670.1\|AUX24121.1\|6133586_6134441_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX24123.1\|6136921_6137827_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|235906
CP012670.1\|AUX24117.1\|6125884_6126511_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|378947
CP012670.1\|AUX24112.1\|6116436_6118122_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379913
CP012670.1\|AUX24104.1\|6107973_6108561_+\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|238045
CP012670.1\|AUX24118.1\|6130495_6130957_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX24105.1\|6108660_6109596_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
CP012670.1\|AUX24122.1\|6134477_6137000_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|270916
CP012670.1\|AUX24106.1\|6109656_6110532_-\|NmrA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|187542
CP012670.1\|AUX24120.1\|6132871_6133585_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX24111.1\|6115836_6116328_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377529
CP012670.1\|AUX24109.1\|6113672_6114263_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|129813
CP012670.1\|AUX24119.1\|6132331_6132691_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX24115.1\|6123648_6124326_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378275
CP012670.1\|AUX24107.1\|6110920_6112216_+\|serine-protease	unknown	unknown	gnl\|CDD\|214473
CP012670.1\|AUX24114.1\|6119904_6123606_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274531
CP012670.1\|AUX24116.1\|6124360_6125719_-\|protein-ImpJ/VasE	unknown	unknown	gnl\|CDD\|377569

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX24103.1\|6107427_6107841_-\|globin	gnl\|CDD\|381282	cd14773, TrHb2_PhHbO-like_O, Truncated hemoglobins, group 2 (O); Pseudoalteromonas haloplanktis PhHbO like. The M- and S families exhibit the canonical secondary structure of hemoglobins, a 3-over-3 alpha-helical sandwich structure (3/3 Mb-fold), built by eight alpha-helical segments. Truncated hemoglobins (TrHbs, 2/2Hb, or 2/2 globins) or the T family globins adopt a 2-on-2 alpha-helical sandwich structure, resulting from extensive and complex modifications of the canonical 3-on-3 alpha-helical sandwich that are distributed throughout the whole protein molecule. TrHbs are classified into three main groups based on their structural properties and named after Mycobacterium sp. genes glbN, glbO, and glbP: TrHb1s (N), TrHb2s (O) and TrHb3s (P). TrHb2's belonging to this group include Pseudoalteromonas haloplanktis PhHbO (encoded by the PSHAa0030 gene) which appears to be involved in oxidative and nitrosative stress resistance.	1.68452e-45
CP012670.1\|AUX24108.1\|6112389_6113559_-\|uncharacterized-protein	gnl\|CDD\|240291	PTZ00146, PTZ00146, fibrillarin; Provisional.	8.43117e-08
CP012670.1\|AUX24110.1\|6114348_6115833_-\|type-VI-secretion-protein-EvpB	gnl\|CDD\|274538	TIGR03355, VI_chp_2, type VI secretion protein, EvpB/VC_A0108 family. Work by Mougous, et al. (2006), describes IAHP-related loci as a type VI secretion system (). This protein family is associated with type VI secretion loci, although not treated explicitly by Mougous, et al. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
CP012670.1\|AUX24123.1\|6136921_6137827_-\|uncharacterized-protein	gnl\|CDD\|235906	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau.	0.000425842
CP012670.1\|AUX24117.1\|6125884_6126511_-\|uncharacterized-protein	gnl\|CDD\|378947	pfam12790, T6SS-SciN, Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113. One of the virulence mechanisms of E coli is the production of toxins which it produces from dedicated machineries called secretion systems. Seven secretion systems have been described, which assemble from 3 to up to more than 20 subunits. These secretion systems derive from or have co-evolved with bacterial organelles such as ABC transporters (type I), type IV pili (type 2), flagella (type 3), or conjugative machines (type IV). The type VI secretion system (T6SS) is present in most pathogens that have contact with animals, plants, or humans. SciN is a lipoprotein tethered to the outer membrane and expressed in the periplasm of E coli and is essential for T6S-dependent secretion of the Hcp-like SciD protein and for biofilm formation.	3.82512e-27
CP012670.1\|AUX24112.1\|6116436_6118122_-\|hypothetical-protein	gnl\|CDD\|379913	pfam16989, T6SS_VasJ, Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ. T6SS_VasJ is a family from Gram-negative bacteria that forms a component of the type VI pathogenic secretion system. In the case of the Escherichia coli RS218 strain UniProtKB:G8IRL4, EvfF,it represents expression of the full-length gene; whereas it is just the C-terminal part of EvfE, UniProtKB:G8IRL3. The N-terminal part of these sequences is in family ImpA_N, pfam06812.	5.76241e-44
CP012670.1\|AUX24104.1\|6107973_6108561_+\|DNA-binding-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.34982e-17
CP012670.1\|AUX24105.1\|6108660_6109596_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	7.02022e-57
CP012670.1\|AUX24122.1\|6134477_6137000_+\|uncharacterized-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.26618e-86
CP012670.1\|AUX24106.1\|6109656_6110532_-\|NmrA-family-transcriptional-regulator	gnl\|CDD\|187542	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs. Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	3.51426e-66
CP012670.1\|AUX24111.1\|6115836_6116328_-\|hypothetical-protein	gnl\|CDD\|377529	pfam05591, T6SS_VipA, Type VI secretion system, VipA, VC_A0107 or Hcp2. VipA is a family of Gram-negative bacterial proteins that form part of the type VI pathogenic secretion system. Members have been variously defined as VC_A0107 family, Hcp2 and VipA, for ClpV-interacting proteins. VipB and VipA proteins interact very closely to form the shaft of the pathogenic penetrating needle system.	1.75204e-65
CP012670.1\|AUX24109.1\|6113672_6114263_-\|hypothetical-protein	gnl\|CDD\|129813	TIGR00730, LOG_family_protein_YJL055W, TIGR00730 family protein. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions. [Hypothetical proteins, Conserved].	2.64727e-63
CP012670.1\|AUX24115.1\|6123648_6124326_-\|hypothetical-protein	gnl\|CDD\|378275	pfam09850, DotU, Type VI secretion system protein DotU. DotU is a family of Gram-negative bacterial proteins that form part of the membrane-joining complex of the type VI secretion system. DotU binds tightly to IcmF and together they are tethered to the inner membrane at one end and the peptidoglycan layer at the other; they interact with Lip1 which then tethers the peptidoglycan layer to the outer membrane.	8.87139e-46
CP012670.1\|AUX24107.1\|6110920_6112216_+\|serine-protease	gnl\|CDD\|214473	smart00020, Tryp_SPc, Trypsin-like serine protease. Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues.	3.20667e-19
CP012670.1\|AUX24114.1\|6119904_6123606_-\|hypothetical-protein	gnl\|CDD\|274531	TIGR03348, VI_IcmF, type VI secretion protein IcmF. Members of this protein family are IcmF homologs and tend to be associated with type VI secretion systems. [Cellular processes, Pathogenesis].	0
CP012670.1\|AUX24116.1\|6124360_6125719_-\|protein-ImpJ/VasE	gnl\|CDD\|377569	pfam05936, T6SS_VasE, Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE. T6SS_VasE is a family of of bacterial proteins that are essential for the type VI pathogenic secretion system, although the exact function of this particular component of the system is still not known.	9.8103e-134

>CP012670.1|AUX24112.1|6116436_6118122_-|hypothetical-protein
MAAEDAITQARARVETLLAPIQGGVGADVTYDEAFEALKNEIDKLQSLAGGKVDWGRVASGADEILSEKSKDFRVALYYATARAQLDKLPGLLDGLVLVQELNGAFWDTMYPALRRPKARGNLCSWFGDLAADTLAGLTPSAAERDVVNALDQVSRALDADLSDKLGDAYGGFGALRNTIRSLVASLPAEAPPPPPPPPPPPPKPEPEPQAQAALVAAPVAAVVAPPPAQIAAPPAAASAGDPGLSVEAIADEDSALSALGRCALLLARVGDALRAADPKRAAAYRILRAGLWIDILDDPGASSPSGATPIPPPPDHVRQALPALTSQGAFADILPVADEFASNYPFWLDPHRYAAHALEQLGEDYADARRAVLIEVAVLLLRAPLLPTLKFNDGMPFADDETQAWLSTEVAAVLGGAAQNGAAARPRSYLDKPLSEARGFVANQQPIEAMVLLEKAAAAAPSALDRFRAKLAMAQINIELSQFLVARAQLEALEQVVEHHRLTTWQPALCAELYAALHTCYRVLNQGYDVAPEAKAREALAFERVCQLDAALALKLSLGE
>CP012670.1|AUX24111.1|6115836_6116328_-|hypothetical-protein
MKEGSVAPKERVNITYKPATGNAKEDVELPLKLLMLGDYTMRPDPRPLEDRKPINVDKDNFQKVMSEQKLALTFNVKDVLSEQENSELTVNLKFRRLSDMEPEAIANQVPELKKLLDLRAALTALKGPLGNEKAFRNKIQQILSDPAQRNKIVSELGLDKEGE
>CP012670.1|AUX24110.1|6114348_6115833_-|type-VI-secretion-protein-EvpB
MATETQAAGSAGVQSLEGGSLLDEILAETKMTPGDEGYEIAKRGVQAFISELVAPRREGEKVDKAFVDALIAEIDVKLSRQIDEILHHPTFQKLESAWRGLKFVIDRCDFRENVKVEMLNCSKDDLLADFEDAPEVPKSGLYKIVYSAEFGQFGGKPVGAIIANYEFGPGPQDVALLQKCAAVATMSHAPFLAAAGPQFFGLKDFLGLPNLKDLKALFEGPQYTKWNAFRETEDARYVGLVMPRFLLRLPFGNNTVPVKAFNYEEDVVGQHDAYCWGNATFAFATRLADSFAKYRWCPNIIGPQAGGSVENLPLHQYEAMGEIQTKVPTEIMLTERREFELSEEGFIGLTFRKDSDNACFFSANSAQKPKFFGQSEEGRAAEMNYRLGTQLPYMFIMCRIAHYLKVLQREQIGTWKERADLEKELNDWIGQYVADQDVVSASVRGRRPLRKARIIVTEVPGNAGWYKVDMQVRPHFKYMGAFFTLSLVGKLDKD
>CP012670.1|AUX24109.1|6113672_6114263_-|hypothetical-protein
MTTLSRICVYCGSSPGASPAYREAAVRLGELLAERGIGLVYGGGHVGLMGVIADAALARGGEVIGVIPRFLNTREVGHTGLSELHVVETMHERKAKMAALSDAFVAMPGGIGTLEEMFEVWTWTQLGSQQKPVGVLDVAGYYRLLIAFLDHVEAERFLRPAHRAMLQVADEPEALLELLAGWRPTVGAKWMTPEER
>CP012670.1|AUX24108.1|6112389_6113559_-|uncharacterized-protein
MLTSMMNLRSWSIGIAAGLTWILAGESSADACSPPLPGLMETFPESGATYPGNAALFFYGFDISLEGVSATVDGEPATLVLAPDVPAAGHSLAARIEPPPGEGQAIVIEGDFCSTGPCEVTRIELTAGAADTTAPAAPFGLSFNLHDYADFESSGGDCQTSSDLAWWLTIDGEAPALGASPVIYTIEAFRDDSFSKPVFSESAFARAASSTRAIHRTADVLDGADAPEALCFRVSAIDAAGNAASETAHACKPCYYRKDPKAAEPSFAPPAQPEWAAADLYPGGTCDPGTGTGGGGAGGEGATSGGAGGGAASGGGGAGGGGASSGGGGASSGGAGGGAASGGAGGGDDGQVEDGGSCSVAGGAGGERPAGGAALALLACAALAGRRRR
>CP012670.1|AUX24107.1|6110920_6112216_+|serine-protease
MNKRELGNTLSLVVCAGVAFGLSTACSIAEEPDAPFESLDAQSSEIIGGEIAEASPWAVQVFDVRGETGDFYQCTGTLVAPRWVLTAQHCIADEGETSAVRVGSNTYGEGERIAVDAVEVPSAVADIALLHLTEDADGPFVQLAEATSVAIGNDATAYGWGSEGTPLVMAPSLKKAILHIDGRYSDEELLATGVTGSGWSGDSGGPWFVDGRQVGVFSGVNGQDGTNLHATHLGVDVARHRAWIDATIAGGPTVHPSDQVVLHDLSDFTGVSQGFGIGRHDLAGLSIIGNDRASAIEVPAGLRVTAFFHNDFGGEARVFTSDTDLVAAGFSDVISSLVVALASDPQADVVTLYEHANFSGDSVVYGVGSSLFFSSPWDQRVSSVRVPAGFKLTLYDGLWRYSAESRVFTTDANLASHGFDDKTRSFLIERL
>CP012670.1|AUX24106.1|6109656_6110532_-|NmrA-family-transcriptional-regulator
MFFVSGITGQVGGAAARLLLAGGHAVRTLARDPRKAAAWSQKGVDVRRGDFSDAAAVAAAMEGVEGAYLMLPPLLAPAPGFPEAKAIIESFREALRRAPPPRLVVLSSIGSQQSSGLGLITTTHLLEQALCDLPFPTAFLRAGSFLENYTFSLKAAASTGWFDTYRSPTDRPVPMIATEDIGKEVARRLVGGWSGKLIVELGSPMSPDDLARAMSEALGRPVKARSIPRAQWTARLEARGMAPGTTGPFEEMEDSFNSGWIDFGVPGAERVAATVTPAQVFAHARKAGVGI
>CP012670.1|AUX24105.1|6108660_6109596_+|LysR-family-transcriptional-regulator
MDARINLDLNDVALFVRVVQARSFSAVARERGVPGSTVSRRIARLESVLGIRLLERTTRRLRLTDAGQAYFAHAERAVDDVWQGTDRVRELRKEPRGRVRVLAPIILGASVANVIYTYLAKHPGVSIDLELDERRIDLLAEGFDIAILKGKADSGDFVARELWRSTRKLLYASPRYLEARGAPRRVEDLARHDCIATRATEGFATWTLYQGRSKRRVTVAPRFYVNEFSAAHGAAIAGVGIAMLPEVRCLEDVAEERLVRVLDEVEGESGGVYLLYRAHGSLTAAVRTCIDHFLAELPSTDPSRVAHKRRA
>CP012670.1|AUX24104.1|6107973_6108561_+|DNA-binding-protein
MLEACYSPGMDQDPELSGRLAKNIKQLREARGLTQQQLAKLAGVPRATWAHLESGVANPTLGVLHRAAAALQVSIEEMLSAPRATCQLYPRDTLPTRSPGQAVVRKLLPDPIPGMEIERIEIPAGGRMTGVPHTPGTREYLTCEKGEVQLVVGGERFALGVGDVAVFRGDQRHSYNNPGKQVAVGYSVVLLARVI
>CP012670.1|AUX24103.1|6107427_6107841_-|globin
MRPSMDAAPETPFTLLGGEPAVRRLVERFYDLMARDEPALARLHVCDERGQVCRESRDRFALFLIGWLGGPQDYIAAHGHPRLRMRHARVPVDIAMRDAWMRCMRAAMAEVDVPAPLRAFLDQRFAEVADFMRNRPG
>CP012670.1|AUX24114.1|6119904_6123606_-|hypothetical-protein
MWLWILSALFLAVVWGVWFLLRPAGGEGAELLPIEIPLAATAAVVALLVGLAIYRRIRAARAARALEKAIAQQAQEQAINAKPERRAEIQEVHRQMQEGIAALKASKLGGGKRGADALYVLPWYVMVGPPGAGKTTALRHSGLVFPYLDPERTGVRGVGGTRNCEWWFTNEAILLDTAGRYTTESDDHDEWMAFLETLLEYREHKPLNGVIVAVSLSELLDASDDQIDQTAKKIRARIDEMQRTLHMILPVYVLFTKADLVAGFAEYFGDLKKSERAQPWGATVRLDERKDEPGKIFDREFDLLVERLHARLTKRLIGERNREAKEKIFQFPLEFAGVKRNLSDFMAAAFAPSAGAAPAPILRGFYFTSGVQEGRPLDRVVGAMGRAFGLRAPLGEGEEDAAVEKESKSFFLHDVFTGVVFPDQDLAARTEAEMRRRRLQRIAAAAAAAILAILFLVPAVVSFYNNKALVAETGQISDEVALVRWAGRDGARPDVPGNIDRLDKLQGQVGKLDRFVEDTPVDHGWFMFQGDKLFPPTLEQYIKSLKEGFVAPAKAQLERELETVREREYLDGYNALRSYLLLGKEHRGKLEEEAKWQVGRLTQVWANHLRPITDLPESDLKARLAPHVAYYVDLVRRGVLAAEDLDDPLIQKARDDLRKVDPTKRYYDQIVTVLKDQKYDEAGPNTRENLKYPPVSLDEMFADRPEVLSVIQSAQRNRTGNWFEVEGPYTAKGHAQVIESLKEGRKKLERELWVLPLSDDEERQGDRIQKELERVRQDYDNAYISQWEAFFRDIQVEIPKTNRDAIREFRILSTPDWPYRRLLQRLADETQFQRDEKPNVLTADGGIIDQVKNKLRQRTERRTGPLGGLLPSGEAEHYDPVPDKFASMVEFGVPGPAAEGQPPPAPKLNRYVSLLEQLAGEMSVVEDGPPDTDTSRATQLFQDAVKETQGLLLSMDETGQRHMGPLLMNPLRQAYKAVVRRAGGAASGIWEVEVWPHYRDKIKDRYPFNLASSRDASLEDAMAFFKPQDGVLWGFYETYLKGFHYKVGHDYYPRSHLAGQPQAARPFTPFNPNLYNCLRRADEITDALFAGGGAEPRVVFHINMKTVSPIVSEVVFEVDGQKRLYRNEKEFWHTFNWPGDGPKGARIQVRGAGGLDEELVREGPWGIFRLFEAGTTTAQKDNDQLFTVTWQMTAPPVTVTMEVRPTRGNHPFPSSFFRATNCPPSIGDRFGKG
>CP012670.1|AUX24115.1|6123648_6124326_-|hypothetical-protein
MSLSQTMYFVCSDVLSLILQLRNSRDLPAPDILQRRVLGLFDTMMQNGREARIPEQDMIDAKFALAAFADEVIFNSNWPGRTQWLQNPLQFQFFQLNTAGDGFFTNLDNLYGQRGRNHVAQIYFLCLALGFQGKYRLRQQEGLGAVIEGVGNHVAVAEGGGEVLAPNAERKDGGAGAVRRELPYLAIALGLLVLAVLVVIVLRLIVASDAEGVADAIKKLLSTGN
>CP012670.1|AUX24116.1|6124360_6125719_-|protein-ImpJ/VasE
MIHPRKPVWTEGLFMTPQHLQQTDLYHETLLHARLHAVVGYDWGITSAQFDERALAAGQFKVIRCHGIFPDGTPFFIGDRGEDQVEARPLEGAFPAALDALDVFLGIPNVRETAANVSLDPAKVGPAQRFVAAQATVPDVNTGRNDTSVAWARSNLRLIFGTEPRDAYQTVRVAQLARDRAGAIVLRKSFIPSVLRINASDHIMSGLRRVLSALVGKQKSLVEGRRMRTAASIDFQASDTAKFWLLHTVNSYIPVVSHLVDHGGAHPEQCFVVLGSLIGELCTFSADGDPTTLPKFNYLDLEGVFDPMFERAMALISGSIAEQYVIVPLEKREDGMYLGRFEDPKLPRSHEMFLEAKGTDEATLRERLPRLLKIGSWTQIGHILHSATPGVRVAIEYRPPGAIPVKPGLVYLRVDQAGDYWNDILGSGTIAIYQPIEPQKVDLRLIAVPAGK
>CP012670.1|AUX24117.1|6125884_6126511_-|uncharacterized-protein
MVGLLAALLGAAVPVAGCSSPAPPPAAPEPCDVQIVTLSIYAADNINPNENGNPRPVVVRLYQLKSSTRLENATYDQVLLRDKEVLEDDLAKVDEVEVFPNDLVEVKFERLKDASHLAGVALFHGPKGQSWKTFYEFPLPPGEAQCGGRNPDAGPPVADPRVAFFLDSTKIDNGVEFDESMFPNATAVRRLNLPKKAAAPEASPAAGK
>CP012670.1|AUX24118.1|6130495_6130957_+|uncharacterized-protein
MDPRGICQRRDPRSSQTAERSTQEDTKGKTMSSSSQPPLRALRVPAGWCVSTNGLREIDPSSLTIDHPHWEFFEEDLLVLVHAHREAVLDLGWYPEMRSEGQFRAELIIAEDWTNPTVTLSTRNLDEIVAWIEEQMVHAHKLNPPLRQWRPKW
>CP012670.1|AUX24119.1|6132331_6132691_+|hypothetical-protein
MRPFHIAPLQPLRIPTGWRITINNLCEFNPCTINDPSDERWEYLEEDLFSAQHEHYQTTVDVGWYPSMSPDGNYKAIFILNDDWNNPLDELVTRNLQEIVPWLEERMANPQARRKGRTQ
>CP012670.1|AUX24120.1|6132871_6133585_+|uncharacterized-protein
MTMQDAPAAPTGLELDHEGPTDAAAPGEAGRSRGATLQDLVADEPLPQAPCAPVAIGMRTGRVLSVAGDRATLALGDADAPVEAAIAPSVDPAVVDEAREQGNAVLVELSPGEAPVVVAVLTTQRPRAIRLHAATVHIEADQELSLSAGESFVQMRRGGLVTIAGAQEVSMRTSQGTVRVRKDGEIELDSESEVLLRSSKSALRVRAEDEEIALIATQIRATSRGLFRMVGRLLRLN
>CP012670.1|AUX24121.1|6133586_6134441_+|uncharacterized-protein
MPAPAGAAGWHAGSMPEADRAVSAWLYRHALCHRREGDAGDRFRSGGGSRLPPAERFRSRGGSRLPPPDRFRSGRGSRLPPPDRFRSGRGSRLPPPDRFRSGRGSRLPPPDRFRSGRGSRLPPPDRFRSGRGSRLPPPDRFRSGRGSRLPPPDRFRSGRGSRLPPPDRFRSGRGSRLPPPDRFRSGRGSRLPPADRFRSGWRASSCLRGHHTPRAQPSPPRLPPSRGLPPIRPSAVRFPEPIRSQAPMILASAARRGARREIRDHGAEHPPRSGPRGARRADLG
>CP012670.1|AUX24122.1|6134477_6137000_+|uncharacterized-protein
MSRPEGIRSDAPPSPPGDRTYATGDRCEKYRILRMLGEGGMGQVYVAEDDYLKRRVALKVVRRKYMLGGRFAQAQRKEARVLAELDHPNIVKVYDAGITRGGVMYIVMELVDGISLRELIRRVGALDVPSSLSIAAQIADAVRVAHRAGIVHRDLKPENALITRAGLVKVVDFGIATRVRRRAEEEASSDPFANIATVHYMAPEQALGDGATKASDVYAIGMILYELIAGRHTFAAASDEMPTRGEVTLHQIHAVPRPLVEAVPGFDGREISDLVDRMLSKIPRERPRAAEVQRALARELRRYQEENPHDAGRSSLAPEHRRDAPIAPQPRGGWAGPTEPDAGVAGSTGEASRSGRGRAAWPETGEDRPGPQLVTAPLDRAFRPPAPETALPFQPAGAAPPVLRGRGWTMRMPGAPPVPGGPGSATTAPPPESAAWSPAAGSPLNPRQITTQRMLPAAPQPATAPFPSASGYAANAPAPGPATHAGAASHAGHTTHAGPASHAGAASHAGAASHAGPASHAGAASHAGAASHAGHTTHAGAASHAGPASHAGAASHAGHTTHAGPASHAGPASHAGPASHAGYTTHAGPASHAGYTTHAGHTSHAGPPASPPGGSSGARATSPSLTTMASPGAVPLLVEHRPRAVGRLAKAGQWLAVSVASALTSGLAAALVLTWCSSRGVDAPESMATDPAPVTSGPVRLPETTTTAGPAAVASASSSPTAAASGAASPGDLAAARTAAPALAEAPSPPAASSTLSAVVPQAAATAAPPPAAPARPAPPPAAVAPGPRATSTARSREARPPSTDQDDDIYEDDIYGMPAPDRRRAAPARPARKAPSRPF
>CP012670.1|AUX24123.1|6136921_6137827_-|uncharacterized-protein
MGTVAVGAGSDDAEGRGVGVRSALGLAPSAPARVAGAGVLGAAGADAGVLGVAVACADAPGAAVAWTDVPGAAVAWADAPGAAVAWTDALGAAVAWTDAPGAAVAWADALGAAVAWADALGAAVAWADALGPAWSTALAAPVGAPGAVETTDRTPSSWALRLPSTKPSTVGTRTQSVAITAYLIILPAGHRTAGAPPPVPIAAPCGSAADPAAGAAPADGRASLDGSRCASASRRRGFWSARRMFSSEAPWSATRRNVSSFGRYFLTSWLMRGDLDQNGREGALRAGRAGAARRRSGAGIP

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Crispr_ID: CP012670_35

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_35

6263493-6263621

Orphan

Consensus_repeat	Method
CCCACGTTGAGCCGAGGCAGCCCGCCGCCGCCGGGGT	CRISPRCasFinder

1 spacers

WYL

The CRISPR arrays of CP012670_35

>merge|CP012670|35|6263493-6263621|CRISPRCasFinder
CCCACGTTGAGCCGAGGCAGCCCGCCGCCGCCGGGGTGGCCCCGGCGCGTCCCAGGTTGGCCCCGGCGCGTCCCAGGTTGGCCCCGGCGCGTCCCAGGTTGAGCCGAGGCAGCCCGCCGCCGCCGGGGT

>CP012670|35|32|6263493-6263621|CRISPRCasFinder
CCCACGTTGAGCCGAGGCAGCCCGCCGCCGCCGGGGT	GGCCCCGGCGCGTCCCAGGTTGGCCCCGGCGCGTCCCAGGTTGGCCCCGGCGCGT
CCCAGGTTGAGCCGAGGCAGCCCGCCGCCGCCGGGGT

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX24208.1\|6256400_6256838_-\|biopolymer-transporter-ExbD	unknown	unknown	gnl\|CDD\|223917
CP012670.1\|AUX24216.1\|6263636_6264176_-\|Holliday-junction-DNA-helicase	unknown	unknown	gnl\|CDD\|234587
CP012670.1\|AUX24224.1\|6272161_6273283_+\|DeoR-family-transcriptional-regulator	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
CP012670.1\|AUX24223.1\|6271688_6272144_-\|aldehyde-activating-protein	unknown	unknown	gnl\|CDD\|226314
CP012670.1\|AUX24212.1\|6258977_6259685_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|131209
CP012670.1\|AUX24222.1\|6270555_6271596_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381302
CP012670.1\|AUX24209.1\|6256842_6257301_-\|biopolymer-transporter-ExbD	unknown	unknown	gnl\|CDD\|223917
CP012670.1\|AUX24210.1\|6257254_6257962_-\|flagellar-motor-protein-MotA	unknown	unknown	gnl\|CDD\|131843
CP012670.1\|AUX24219.1\|6268177_6268372_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
CP012670.1\|AUX24221.1\|6270103_6270559_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133384
CP012670.1\|AUX24218.1\|6265842_6268137_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
CP012670.1\|AUX24220.1\|6268685_6269273_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238141
CP012670.1\|AUX24213.1\|6259811_6260408_+\|acetyltransferase	unknown	unknown	gnl\|CDD\|223975
CP012670.1\|AUX24207.1\|6253350_6256299_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|273804
CP012670.1\|AUX24217.1\|6264180_6265689_-\|FAD-binding-protein	unknown	unknown	gnl\|CDD\|273050
CP012670.1\|AUX24211.1\|6258021_6258804_-\|energy-transducer-protein-TonB	unknown	unknown	gnl\|CDD\|367555
CP012670.1\|AUX24225.1\|6273399_6275223_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|237537
CP012670.1\|AUX24215.1\|6262552_6263242_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319983
CP012670.1\|AUX24206.1\|6251857_6253270_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|215598
CP012670.1\|AUX24214.1\|6260421_6262146_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379143

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX24208.1\|6256400_6256838_-\|biopolymer-transporter-ExbD	gnl\|CDD\|223917	COG0848, ExbD, Biopolymer transport protein [Intracellular trafficking and secretion].	4.20589e-26
CP012670.1\|AUX24216.1\|6263636_6264176_-\|Holliday-junction-DNA-helicase	gnl\|CDD\|234587	PRK00039, ruvC, Holliday junction resolvase; Reviewed.	1.84212e-64
CP012670.1\|AUX24224.1\|6272161_6273283_+\|DeoR-family-transcriptional-regulator	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	5.21372e-45
CP012670.1\|AUX24223.1\|6271688_6272144_-\|aldehyde-activating-protein	gnl\|CDD\|226314	COG3791, COG3791, Uncharacterized conserved protein [Function unknown].	5.00488e-18
CP012670.1\|AUX24212.1\|6258977_6259685_-\|transcriptional-regulator	gnl\|CDD\|131209	TIGR02154, PhoB, phosphate regulon transcriptional regulatory protein PhoB. PhoB is a DNA-binding response regulator protein acting with PhoR in a 2-component system responding to phosphate ion. PhoB acts as a positive regulator of gene expression for phosphate-related genes such as phoA, phoS, phoE and ugpAB as well as itself. It is often found proximal to genes for the high-affinity phosphate ABC transporter (pstSCAB; GenProp0190) and presumably regulates these as well. [Regulatory functions, DNA interactions, Signal transduction, Two-component systems].	5.3784e-78
CP012670.1\|AUX24222.1\|6270555_6271596_-\|aldo/keto-reductase	gnl\|CDD\|381302	cd19076, AKR_AKR13A_13D, AKR13A and AKR13D families of aldo-keto reductase (AKR). Schizosaccharomyces pombe aldo-keto reductase YakC is a founding member of aldo-keto reductase family 13 member A1 (AKR13A1). It catalyzes the reversible reduction of ketones to the respective alcohols using NADP(+) as a hydride donor. Rauvolfia serpentina PR is a founding member of aldo-keto reductase family 13 member D1 (AKR13D1). It catalyzes the NADPH-dependent reduction of the aldehyde perakine to yield the alcohol raucaffrinoline in the biosynthetic pathway of ajmaline in Rauvolfia, a key step in indole alkaloid biosynthesis. This family also includes Arabidopsis thaliana aldo-keto reductases, ALKR1-6.	0
CP012670.1\|AUX24209.1\|6256842_6257301_-\|biopolymer-transporter-ExbD	gnl\|CDD\|223917	COG0848, ExbD, Biopolymer transport protein [Intracellular trafficking and secretion].	4.51957e-32
CP012670.1\|AUX24210.1\|6257254_6257962_-\|flagellar-motor-protein-MotA	gnl\|CDD\|131843	TIGR02796, Protein_TolQ, TolQ protein. TolQ is one of the essential components of the Tol-Pal system. Together with TolR, it harnesses protonmotive force to energize TolA, which spans the periplasm to reach the complex of TolB and Pal at the outer member. The tol-pal system proves to be important for maintaining outer membrane integrity. Gene pairs similar to the TolQ and TolR gene pair often number several per genome, but this model describes specificially TolQ per se, as found in tol-pal operons. A close homolog, excluded from this model, is ExbB of the ExbB/ExbD/TonB protein complex, which powers transport of siderophores and vitamin B12 across the bacterial outer membrane. The Tol-Pal system is exploited by colicin and filamentous phage DNA to enter the cell. It is also implicated in pathogenesis in several bacterial species [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	2.49566e-36
CP012670.1\|AUX24219.1\|6268177_6268372_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	0.000618458
CP012670.1\|AUX24221.1\|6270103_6270559_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	1.07762e-47
CP012670.1\|AUX24218.1\|6265842_6268137_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	0.00236616
CP012670.1\|AUX24220.1\|6268685_6269273_-\|hypothetical-protein	gnl\|CDD\|238141	cd00229, SGNH_hydrolase, SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.	0.00271168
CP012670.1\|AUX24213.1\|6259811_6260408_+\|acetyltransferase	gnl\|CDD\|223975	COG1045, CysE, Serine acetyltransferase [Amino acid transport and metabolism].	8.04413e-36
CP012670.1\|AUX24207.1\|6253350_6256299_-\|TonB-dependent-receptor	gnl\|CDD\|273804	TIGR01782, TonB-dependent_receptor, TonB-dependent receptor. This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins].	1.90644e-34
CP012670.1\|AUX24217.1\|6264180_6265689_-\|FAD-binding-protein	gnl\|CDD\|273050	TIGR00387, Glycolate_oxidase_subunit_glcD., glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity. [Energy metabolism, Other].	7.67089e-131
CP012670.1\|AUX24211.1\|6258021_6258804_-\|energy-transducer-protein-TonB	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	7.11731e-16
CP012670.1\|AUX24225.1\|6273399_6275223_+\|uncharacterized-protein	gnl\|CDD\|237537	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional.	3.59561e-08
CP012670.1\|AUX24215.1\|6262552_6263242_-\|hypothetical-protein	gnl\|CDD\|319983	cd16325, LolA, LolA, a periplasmic chaperone. This family contains periplasmic molecular chaperone LolA which binds to outer-membrane specific lipoproteins and transports them from inner membrane to outer membrane (OM) through LolB, a lipoprotein anchored to outer membranes. There are five Lol proteins (LolA, LolB, LolC, LolD, and LolE) involved in the sorting and membrane localization of lipoprotein and are highly conserved in Gram-negative bacteria. LolA accepts OM-specific lipoproteins that are released from the inner membrane by the LolCDE complex and transfers them to the OM receptor LolB. Studies have shown that hydrophobic surface patches large enough to accommodate acyl chains of the OM lipoproteins and the structural flexibility of LolA are important factors for its role as a periplasmic chaperone.	5.96381e-40
CP012670.1\|AUX24206.1\|6251857_6253270_-\|hypothetical-protein	gnl\|CDD\|215598	PLN03138, PLN03138, Protein TOC75; Provisional.	0.0088761
CP012670.1\|AUX24214.1\|6260421_6262146_-\|hypothetical-protein	gnl\|CDD\|379143	pfam13367, PrsW-protease, Protease prsW family. This is a family of putative peptidases, possibly belonging to the MEROPS M79 family. PrsW, appears to be a member of a widespread family of membrane proteins that includes at least one previously known protease. PrsW appears to be responsible for Site-1 cleavage of the RsiW anti-sigma factor, the cognate anti-sigma factor, and it senses antimicrobial peptides that damage the cell membrane and other agents that cause cell envelope stress, The three acidic residues, E75, E76 and E95 in Aflv_1074, appear to be crucial since their mutation to alanine renders the protein inactive. Based on predictions of the bioinformatics programme TMHMM it is likely that these residues are located on the extracytoplasmic face of PrsW placing them in a position to act as a sensor for cell envelope stress.	1.19679e-55

>CP012670.1|AUX24215.1|6262552_6263242_-|hypothetical-protein
MTRTSLYRLAAACLIGLTAPLTVVIATAGESQAAGPTAEELGRRVQQFYDSTRTFKATFKQTYTIKVQDVKKVSTGKVIFEKPGKMSWTYDAPNGNRVVSDGVTIKVYEKENEQMFETPVKGSQYPAALSFLMGKGQLTKDFSLRLLDAAQMKFEGGYVLEGTPKEATPAYQKMLLYVDGRTNQVRRVLILDAQGNRNRFDFSAPVVNQPVPKAEFEFTPPPGTRVVRP
>CP012670.1|AUX24214.1|6260421_6262146_-|hypothetical-protein
MNHPRGHRPDSPGTPQQPRPAERPGEHAHGGGQVPVGAPAQGAWPAPSGPPAHWQADRGPVPQGVPPQGHPPQGHPPHWAGPQGHPPHWAGPQGHPPQGHPPHWAGPQGHPPHWAGPQGHPPQGIPPQGHPPRGIPPQGHPPQGHGSPGGAPMPAYGGQPQRGAPVPPGPPLRPVLAPHLTPLPQPGHVHPLPGYPAVVRKPDPDRRRRLAGLWLWAMGILAGAVLNVVFALLGVLGAEGDMLGAMVVGALFAFPPLAIYLFVPTIIDRFDPEPWWCLLMAFLWGALAATGFSIVINTVVHAGVAASFGAPMGELVSASISAPFAEELWKGLGVFGFFYFLRREFDGIVDGIIYATFCALGFAAVENVLYYARAAMQGSDVLAGTFVLRGVFTPWLHPLFTSMTGIGFGLARESSRTWVRIAAPIGGYLLGVALHAVWNFLPTALGRAMGEVFIPWLLLWLCFVAAFFGIIVALVIRKGWVIRDHLRDEVALGMLTQDELELVCSPIGRLRCTLGWRGATGRSFIRAGARLALSKWHTARAMRGNNRTLSADFIAPLRQEIAQLRQALLARAPR
>CP012670.1|AUX24213.1|6259811_6260408_+|acetyltransferase
MLRTLRLIVADVRQKATWCYGSAPLPTILKTLATDGTAAMILYRLTQAARTHRMPVVEMVLNKTTNLVGGCVIGRGADFGPGFVLIHSNGVVINGNVRGGSNVLIEHQVTIGADRRQTPVLGSDLFIGAGAKIIGAVTVGDGARIGANAVVVKDVAPNTTVVGIPARPVQRREDRVNEGAAPRADGDVGADGVSLPRG
>CP012670.1|AUX24212.1|6258977_6259685_-|transcriptional-regulator
MARILVIEDEPALQKVLDYNLRHAGHEVVLAGQGSDAIRLVQEQRPDLVLLDLMLPDISGTEVCRALQQNEGTQRIPVMIVSARGDEVDRIVGFELGAVDYVVKPFSVRELMLRVQAVLRRVQSASVGERCIEFGCLRIDEGAHRVWVEREEVDLTLLEFKLLVALYEARERVQTRSALLDGVWGIDVSITTRTVDTHVKRLRDKLRHAGDYIQTVRGIGYRFAASPDVPESRSA
>CP012670.1|AUX24211.1|6258021_6258804_-|energy-transducer-protein-TonB
MHLETWNAGEADPDRARRLAIGYATGLLLFAAIALLAARLSGSIQPPRAPEEEEVVAVKLAARVPEAPPPAAAPAPPPPPAEALAPRAPTPRRPALVAPAAVPSEAPPEADPGEAPASADDDIYGEPGGAPGGVPGGVPGGTGTAVVAAAPPPPPPPPPPPPPRGPIHLPENATPPVALSNALPPIPDAARSAGIEATVVVRFVVTETGEVTNVTIVRGHPLFNAAVLATVKTWRYRPAIHAGRPVSVYKTVKIPFRARR
>CP012670.1|AUX24210.1|6257254_6257962_-|flagellar-motor-protein-MotA
MMQFDLEHIWASMGLLSKLVAFALVLMALASVAVVVERLIALARQASETRSFAREARPVMEAWDTARLMDIAERYDRSALARLVAAAVRRFRRAADAGEGGVPAVELARREVSRRREAISADLRRGLSVLATVGSVAPFVGLLGTVIGIITAFQTIASTGSGGLGAVSGGIAEALIVTALGLGVAIPAVLCFNYLTTRIAAVELTLERSAGELIDEMENEHGRPSGEQGIEPKAA
>CP012670.1|AUX24209.1|6256842_6257301_-|biopolymer-transporter-ExbD
MGVRAESKGSSRRPPEPDINVTPLVDVVLVLLIIFMVIAPQMEHGERVELPAVFQPDARSKAKLDPIHVTITGAGNVFLEKEAMADLPALGARLRAIREREPERRVVIKGDSSVNYGRVREAFALCQEVGFAGISLQVSQRGGGAPEAPGEG
>CP012670.1|AUX24208.1|6256400_6256838_-|biopolymer-transporter-ExbD
MGMSAPQGGGRPAGVTPSMNVTPLVDVVLVLLIIFMVVTPLLAKQFWLNLPKKEDPVRVERAPDDADKPVVLTVDERGVLRINQTEVPRAELKERLARIFAARSDDVLYFDADDAAAYAVAVEAMDAARMGGARTIAVLTEKPAR
>CP012670.1|AUX24207.1|6253350_6256299_-|TonB-dependent-receptor
MIRRRIWGVVAASVTPLCWGATALAQGDPGAAAPPPPAAGPGAGAAAADSAAADLAGADEPSPSRPPPAGKGAVWGVVRDASTSEPVLDAQVSVVGTKLKAIADLDGRYRLELPPGNYQLRVWYEAYKPQRVQDVQVAAGQVAQVDVGLEPDQQAEEVIEVEFEPERASVAAQLLLRKNAAHVGDAVGAKEIARTPDRNAAEAAKRIVGATVVDGRYVYVRGLGERYTNALLNGAPLPSPEPDRQAVPLDLFPSLVLSDITVVKTFTPDIPGDFAGGSVQINTRELPTRFLFQASLSLGLNSQATFRDRLTYAGSSTDWLGIDDGTRAVPDEIPDYKVVRLGPKPGGGTITRDEMTAYGRAINSPMATKRSFTPPNGSGSVVVGDTLELGGEQRLGYVATLSYGRKFSARADELLGTYRPAPDGGEPVRRGDIRTGSIRDQVSWGSFASVTYNPGADHKVTLTGLHSRSSDDVASEASGEPREGDSAFRDTLLRFISRALTLGQLQGEHRFEALGGGTLDWKASISAAASEEPDTREAVYIRDDASGAYSWDEGTLSGAHFFNDMSDVSYGGQLSYVQPLLRGDAPTRLKLGGLLNVREREFNARRFRFKQRPGSDPTLLRQGPDRLFSDENIGTALELEEITRETDSYTASGDLFAGYVMTDTALTPWLRAVLGARVEASALSLRAFDRYSAANPEINVDSDEVDLLPALNIIVKSSSISNVRLGAARTLARPQLRELSPFLYQEGYSGREVQGNPDLRRTSVVNGDLRFEIFPTAGEVAAISLFYKHFQDPIEEVIVPNGARGRLTYVNGDVGHVAGVELELRKGLGFISPFLADATALGNITFVSSEVTIDPGASAGGVTIQSNATHPLQGQSPFVVNLGLDYARESTGTSARLLYNVFGARLKRVGSRGLPDEYEQPRHQIDLTVAQRLGERVELKLAGENLIDAPVRVTQGKEDDEDSIVSHYRVGTTVTLSAALTY
>CP012670.1|AUX24206.1|6251857_6253270_-|hypothetical-protein
MRTLGIALACASALSVAALTACGDDESGSSPTTSTAATSGSGGGSGVGGSGVGGSGGGGGADCASPVEVAEAISADTTWTADNCYLMKGIVFVERGATLTIEPGTKIMGEKVSLATLVVKPGAKIDARGTADEPIVFTSQGEEGDRAAGDWGGVILLGEAPVNVEGGKASVEGITGEGTEYGGDKPEDNSGVLEYVRIEYSGILLSQDNEVNGLTFAGVGSGTKVDHVMVHHTLDDCFEFFGGTVNAKHLLCAQNGDDGIDWDLGYKGKLQFVVVQQDPTVADDTNGFEGDNDDDGSLNEPTSEPTIYNATLCGKNEDVDKQQYGMLLRKSTKAHIFNTIVTGFEAGVDIRNAETEVEIASSIFFGNVEANIAYEETDADEATESKLDDDDDGGLDEIAWFEGEASNSAVDPQIADCFAATPDFRPAATLTENAATPPDDGFFDTGASYIGAFKADDTWATGAWVSFDAN
>CP012670.1|AUX24216.1|6263636_6264176_-|Holliday-junction-DNA-helicase
MRVLGIDPGSRHLGWGLLARQGTRIEHVAHGVIDVDTSGTFAGRLVEIDDALERVIASHAPDAAAVESLFFAKDAQSAAKLGHARGVVLLRLARAGLPIAEYPPALVKRTIVGRGAAEKAQVAQVMTAVLRLAAPPRPDAADALAIAMTHLSAASFAAALAASGASAPRRSRQRRVRLA
>CP012670.1|AUX24217.1|6264180_6265689_-|FAD-binding-protein
MRLHPTFPRPSALAIDKARRLLERALGPSKVITEADGCAAYAGDESDQPPVTPDAVVLASSAADIEQAVRAASEAEVPVVPRAAGSGKSGGAVPVAGGIVIATIGMNSIKEISREEQVAVVEPGVILADLHAAVEAEGLFYPPDPNSLKMCALGGNIAENAAGPRAFKYGVTREYVLGLEAILVDGTRLRTGRRTVKGVTGYDVTALLVGSEGTLAITTEATLRLIAKPPSVMTLLCLFPDVRASGRAVSALVAAGVVPRCLELLDRPTLDAVRARGVGVDERAGAMLIIEVDGEPADCEVQAERVGEVCMDAGALDVLVAQDEAQRDRLWEARRQLSPTTRAMARFKISEDVVVPRDKIPALLDEVAEISAATGVRMLTYGHAGDGNLHVNLLWSDPELVPQVEAALSRLFRAVIGMCGTLSGEHGIGTSKAEFLALEQSPELIALERRIKAVFDPKGLLNPHKIFPRRALEAVERGEHGEPTPRPPGSPTHAVAPSHGAC
>CP012670.1|AUX24218.1|6265842_6268137_-|hypothetical-protein
MNAKHPALALSIALAAAACDARSGSPAPGGGDPDSGSPAPGGGDRDPLTPLRQFEATRRAATDFARLPSSDRLLGPDPIALQPVAPAGRRAAPKASTGRAAPPEAPAAPATPALLSPLRGRDALVLLDASLRELSRAPAPASPTGVAVTASGDVYASGEASPVLFRYALRGAALEPAGRIELAGLHGVRDLASGPEGVLYALDERAGTLLTLRPGPAGADGRLPVERAELPIGAGPIRVVRLGRHLLVNCLLDHTLVVLPVGADGRPLPDGAARIRHDGPIWSFDALELGGPGGDRPGGDRPGGDRPGGDGLGGGLLLAAGGVEDHPLDRTGGSFGYIDSFVFLYHVAAGVRPEVTRLAAVNVSEHGVLTPKAIALSALPGSAGARVIATGYGGDRRAELVFRATEAGLSASPEVTTRPLAPGVAAMAPLGGGALAYANPLLDAWLLDAGGDGGAVARRPVRDDGEDRRSAEVRLGEALFFTSLMAPWNRTDGPLSRFTCETCHFEGYVDGRTHHTGRGDVRATTKPLLGLFNNRPHFSRALDPDLTAVADNEFRVAGARSGHDPWFSLSPGDAPWLAELGVTGDVRADLRPEALRRALMSFLMAFSHRRNPAAQGRARFTALERAGARVFHDRCARCHAPVLKSDDPGSAVPFERWEALVLAPEGAIVWGRAGYEKTGVVPYVHEDGARVPSLRRLYKKRPYFTNGSAKALREVLERARFDARPAPAGAAAAEGAFFHDGAPAGLAALDPGEIEALLAFLDLL
>CP012670.1|AUX24219.1|6268177_6268372_-|hypothetical-protein
MKTFLTVLVALGAVCAFGCESKPEQPKPDPTKAAATAEAAQPAKAEPAKPAAAETAKPASTGGW
>CP012670.1|AUX24220.1|6268685_6269273_-|hypothetical-protein
MPSTGGTDGSGGFMPSTGGARTLGYLGCSMSVNVAEGYQMLDGERLWPPIGQYNGQVVQNWANNSDGVWRAFENAMSQYGEPEAVWVMLCIFSNMVTLDEAKQILANVRSRAPNATIYITGQPLYDDPNSCFLAGNGGPDKTDRIAKEAAADPSLNVIYPGSLGPLAADENSDGCHANDKGRRELGQQFIDWFGK
>CP012670.1|AUX24221.1|6270103_6270559_-|MerR-family-transcriptional-regulator
MRTAARSPLGGAPRSPRASGPRPEAAAAWTIAAVAAATGTSAHTLRYYERIGLIRPVSRARSGHRRYGPDDVRWVEFLRKLHATGMPIRRMLAYAALVRRGDDTISERRALLEAHRDEVAAKLAEQEAHLEIIEKKVRMYQELERGARKRG
>CP012670.1|AUX24222.1|6270555_6271596_-|aldo/keto-reductase
MAFVNSVAAGDLRGEEEPTMHTRTLGPLKVSAIGLGCMGMSDFYGPRDEAESIATIHRALELGVTLLDTADMYGPFTNEELVGRAIEGRRDRVVLATKCGIVRDPKDRAIRGVDGSPGYIRAACDASLRRLRVDVIDLYQLHRVDPRTPIEESVGAMADLVKAGKVRAIGLSEASAATLRRAHAVHPLASVQTEYSLWTRDPEDEVLSTCRELGVGFLAYSPLGRGFLTGQIKRFEDLAPDDYRRTSPRFQGENFQKNLDLVAKVEELARERGVKASQLALAWVLAQGDFIVPIPGTKRRSYLEENVAAEAIALSAGDLARLDAVMPKGAAAGLRYPEAVMGLVNR
>CP012670.1|AUX24223.1|6271688_6272144_-|aldehyde-activating-protein
MTNTASAQTTMTSGVRTYRGSCHCGALRIEADFDPSEGTTRCNCTICKKTAWWGVLVRPGAFRLVAGQEVLGDFSRTGAGHAHFCNACGIRVFGHGDIPELGGEFYSVNLNCLDGADLTGVPVTYHDGLHDTWEQIGAAPYVDPFTAVKQA
>CP012670.1|AUX24224.1|6272161_6273283_+|DeoR-family-transcriptional-regulator
MGAGALGRLARGMRGSYDGSRTDPVLDGDEPHVIQTSARLLKLLSLLQSRRFWTGGELARALEVTERSVRRDVDRLRSLGYPVHATTGVGGGYQLGAGKELPPLPLEDDEAVAVAVGLRAAATGPVRGLEEASVRALGKLTQVLPKRLRRKVSALDAVSVRLGDAGPTLDADALATIANACRDAEVLCFEYSSRKDAASARRVEPYRLVHTSYRWYLLAYDLDRGAWRTFRVDRIHGKPRAGRRFTARPLPSDDVAAYVARAVSPEAYRKRARATVHGPAHAVSARLTWGAWQVEALSPDRCAVSSGGASLEELAFQLGFVGFDFEVHEPAELVEHIRRLAERFTRASAAHREAQRAERPPERAPAVTRGDRA
>CP012670.1|AUX24225.1|6273399_6275223_+|uncharacterized-protein
MSWLRGIAGAGLWLAIGGAGCEDQHIVIGTLARGHDGGVAGAPERPRFEAPTAMTELNSSAREEDPTLTDDLLEIYFMSSGGDLDDRGPPRAAGGRRRARGGALGSWMHLRGLEIGNAKVGRSGDHSYSLLRTKGSSNNIFELLHLHHAFGPGLFIDGGEGGNLVLNCDSHDNYDQNGSQGDGQNGDGFGVHYQRTGPSTIIRGCRAWNNSDDGYDHISQEVPVITEGSFAMSNGRGSDGNGNGFKVGSSKTGIRHIVRNDVAWKNKAAGFYANHSSGGNTWLNNTAYDNRTQYNMLASPPDDSSQTIILTGALAHVMRNNVGFPNKNSNMGGVDTAFNTWDLNITETSSAFESTSDAGCTGPREADGSMPSACVFMKLTTESALIDKGTDVGLPFVGAAPDLGAYELGAEPTAGAGGGAAGGSGTAGGGMGGTAAHGSGGDGPGGPVGTSGGMGAAGDAGQGGAPGTGGSPETGGETGSADGETGGRAGGAATSEDDSAAAGRACAVASDDATAGTGGFALLALAAALAARALRSRPRHTPWSSSCRSSSSPRSWPTSPWRRWRPCCSSSRGTSRSALAGHLCGLCARRAARYFSTSLSRAACVAR

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Crispr_ID: CP012670_36

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_36

6689636-6689747

Orphan

Consensus_repeat	Method
TGGGGCCGTGACGAGGGGAGATCTGAGCGACGCGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_36

>merge|CP012670|36|6689636-6689747|CRISPRCasFinder
TGGGGCCGTGACGAGGGGAGATCTGAGCGACGCGAAAGCCCGTCTCCTGTGCGGGTGACCGCCGCTCGGCGGCGCGTGGGGCCGTGACGAGGGGAGATCTGAGCGACGCGAA

>CP012670|36|33|6689636-6689747|CRISPRCasFinder
TGGGGCCGTGACGAGGGGAGATCTGAGCGACGCGAA	AGCCCGTCTCCTGTGCGGGTGACCGCCGCTCGGCGGCGCG
TGGGGCCGTGACGAGGGGAGATCTGAGCGACGCGAA

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX24527.1\|6698200_6698872_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|367321
CP012670.1\|AUX24514.1\|6683252_6683879_-\|ECF-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
CP012670.1\|AUX24519.1\|6686691_6687750_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|378117
CP012670.1\|AUX24511.1\|6680606_6681038_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX24530.1\|6700665_6702327_+\|phospholipase-D	unknown	unknown	gnl\|CDD\|197238
CP012670.1\|AUX24521.1\|6690150_6691284_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271320
CP012670.1\|AUX24529.1\|6700324_6700558_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX24513.1\|6682482_6683256_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235906
CP012670.1\|AUX24525.1\|6695409_6696876_+\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|223363
CP012670.1\|AUX24516.1\|6684042_6685023_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX24522.1\|6691315_6693712_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377775
CP012670.1\|AUX24512.1\|6681200_6682475_-\|glycoside-hydrolase	unknown	unknown	gnl\|CDD\|225940
CP012670.1\|AUX24517.1\|6685155_6685803_-\|haloacid-dehalogenase	unknown	unknown	gnl\|CDD\|223710
CP012670.1\|AUX24523.1\|6693794_6694622_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379342
CP012670.1\|AUX24518.1\|6685909_6686692_+\|nitrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223673
CP012670.1\|AUX24515.1\|6683860_6684043_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX24520.1\|6687838_6689500_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|227511
CP012670.1\|AUX24524.1\|6694630_6695269_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX24528.1\|6699167_6700205_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374260
CP012670.1\|AUX24526.1\|6696872_6698204_+\|subunit-S-of-type-I-restriction-modification-system	unknown	unknown	gnl\|CDD\|341151

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX24514.1\|6683252_6683879_-\|ECF-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	3.05213e-26
CP012670.1\|AUX24519.1\|6686691_6687750_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|378117	pfam09084, NMT1, NMT1/THI5 like. This family contains the NMT1 and THI5 proteins. These proteins are proposed to be required for the biosynthesis of the pyrimidine moiety of thiamine. They are regulated by thiamine. The protein adopts a fold related to the periplasmic binding protein (PBP) family. Both pyridoxal-5'-phosphate (PLP) and an iron atom are bound to the protein suggesting numerous residues of the active site necessary for HMP-P biosynthesis. The yeast protein is a dimer and, although exceptionally using PLP as a substrate, has notable similarities with enzymes dependent on this molecule as a cofactor.	5.10194e-39
CP012670.1\|AUX24530.1\|6700665_6702327_+\|phospholipase-D	gnl\|CDD\|197238	cd09140, PLDc_vPLD1_2_like_bac_1, Catalytic domain, repeat 1, of uncharacterized bacterial proteins with similarity to vertebrate phospholipases, PLD1 and PLD2. Catalytic domain, repeat 1, of uncharacterized bacterial counterparts of vertebrate, yeast and plant phospholipase D (PLD, EC 3.1.4.4). PLDs hydrolyze the terminal phosphodiester bond of phospholipids with the formation of phosphatidic acid and alcohols. They also catalyze the transphosphatidylation of phospholipids to acceptor alcohols, by which various phospholipids can be synthesized. Instead of the regulatory C2 (calcium-activated lipid binding) domain in plants and the adjacent Phox (PX) and the Pleckstrin homology (PH) N-terminal domains in most mammalian and yeast PLDs, many members in this subfamily contain a SNARE associated C-terminal domain, whose functional role is unclear. Like other PLD enzymes, members in this subfamily contain two copies of the conserved HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue), that may play an important role in the catalysis.	8.64807e-60
CP012670.1\|AUX24521.1\|6690150_6691284_+\|hypothetical-protein	gnl\|CDD\|271320	cd05819, NHL, NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats.	6.94639e-13
CP012670.1\|AUX24513.1\|6682482_6683256_-\|hypothetical-protein	gnl\|CDD\|235906	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau.	8.64095e-05
CP012670.1\|AUX24525.1\|6695409_6696876_+\|N-6-DNA-methylase	gnl\|CDD\|223363	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms].	3.29808e-69
CP012670.1\|AUX24522.1\|6691315_6693712_-\|hypothetical-protein	gnl\|CDD\|377775	pfam07090, GATase1_like, Putative glutamine amidotransferase. This family consists of several hypothetical bacterial proteins of around 250 residues in length. The function of this family is unknown. The structure of this cytoplasmic domain was solved by the Midwest Center for Structural Genomics (MCSG). The structure has been classified as part of the Class-I Glutamine amidotransferase superfamily owing to similarity with other known structures. The monomer combines with itself to form a hexamer, and this hexamer exposes a potential catalytic surface rich in Glu, Asp, Tyr, Ser.Trp and His residues.	2.02849e-15
CP012670.1\|AUX24512.1\|6681200_6682475_-\|glycoside-hydrolase	gnl\|CDD\|225940	COG3405, CelA, Endoglucanase Y [Carbohydrate transport and metabolism].	1.25742e-26
CP012670.1\|AUX24517.1\|6685155_6685803_-\|haloacid-dehalogenase	gnl\|CDD\|223710	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only].	1.03392e-40
CP012670.1\|AUX24523.1\|6693794_6694622_-\|hypothetical-protein	gnl\|CDD\|379342	pfam13709, DUF4159, Domain of unknown function (DUF4159). Members of this family are hypothetical proteins.	6.67896e-39
CP012670.1\|AUX24518.1\|6685909_6686692_+\|nitrate-ABC-transporter-permease	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	3.64088e-60
CP012670.1\|AUX24527.1\|6698200_6698872_-\|transcriptional-regulator	gnl\|CDD\|367321	pfam03070, TENA_THI-4, TENA/THI-4/PQQC family. Members of this family are found in all the three major phyla of life: archaebacteria, eubacteria, and eukaryotes. In Bacillus subtilis, TENA is one of a number of proteins that enhance the expression of extracellular enzymes, such as alkaline protease, neutral protease and levansucrase. The THI-4 protein, which is involved in thiamine biosynthesis, is also a member of this family. The C-terminal part of these proteins consistently show significant sequence similarity to TENA proteins. This similarity was first noted with the Neurospora crassa THI-4. This family includes bacterial coenzyme PQQ synthesis protein C or PQQC proteins. Pyrroloquinoline quinone (PQQ) is the prosthetic group of several bacterial enzymes,including methanol dehydrogenase of methylotrophs and the glucose dehydrogenase of a number of bacteria. PQQC has been found to be required in the synthesis of PQQ but its function is unclear. The exact molecular function of members of this family is uncertain.	3.76908e-09
CP012670.1\|AUX24520.1\|6687838_6689500_+\|uncharacterized-protein	gnl\|CDD\|227511	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton].	1.86663e-22
CP012670.1\|AUX24526.1\|6696872_6698204_+\|subunit-S-of-type-I-restriction-modification-system	gnl\|CDD\|341151	cd17262, RMtype1_S_Aco12261I-TRD2-CR2, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Aminobacterium colombiense DSM 12261 S subunit (S.Aco12261I) TRD2-CR2 and Moraxella catarrhalis S subunit (S.Mca353ORF290P) TRD2-CR2. Aminobacterium colombiense DSM 12261 S subunit (S.Aco12261I) recognizes 5'... GCANNNNNNTGT ... 3', and Moraxella catarrhalis S subunit (S.Mca353ORF290P) recognizes 5'... CAAGNNNNNNTGT ... 3'. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases.	1.08881e-90
CP012670.1\|AUX24528.1\|6699167_6700205_+\|hypothetical-protein	gnl\|CDD\|374260	pfam15967, Nucleoporin_FG2, Nucleoporin FG repeated region. Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.	5.41615e-05

>CP012670.1|AUX24520.1|6687838_6689500_+|uncharacterized-protein
MRPRSSRSHGAAAPQRKGKAPYMALTHRPRASRLPFASLTFAAAYAPAALACAFALGACGKEFTAHPPDASTSTGGGGIGGGEGGGGGLGGGGGDGAGGGTGGGCPGGGAVCGAACVDLETDAEHCGACDNACSTFGGTSICRDGACQPPVCEPGRGDCDRDPGSGCEEDLSTSAAHCGTCDKPCAGQCVRGACASPVQISVGADYTCAVLSDQTVWCWGRNTWGNLGDGTRQQDRPIPRQVMGLAGHAVQVAAGLSASRTHTCAVLTDGAVACWGAGNSGQLGDGNTASSLVPLRVKDLTTATRIAVGAAHTCAVTSAHTLWCWGEGGDGQLGYGGHDDQAAPLVILDGVETVAAGLAHTCAGMSERMGESRMRCWGNNLDGQLGLGDFSAKSTPTLLARLSSVAHVAVGTLHTCAAPLSGVASCWGKGDHFRLGTGFEASEAFPREVPEVVDVAGLALGARHSGAVLTGGEVLMWGDNAKGQLGNGTLDRALTPQRIELPSAVALALGEDHSCALTRSGEMLCWGDNTNGQLGDGTTEQRLVPTPVRWPAR
>CP012670.1|AUX24519.1|6686691_6687750_+|ABC-transporter-substrate-binding-protein
MHSTARRRLFLQRLAALAALPLLAPACSRSQAPGGDGSSPSPSGAQGAPPGSAQAAPGGAQAVKVKLALNWVPEPEFGGFYAARESGAFAKENLEVEILGGGAGAPVVQMVAGGQVDFGISGADEVLTARARGADVLPLFTVFQTSPQAIMTHASRGAKGIADVLKSGTLAIEPGLPYAAYLKKKYGFDKVKVVPYDGGVARFVADKDLSQQCFITAEPIAAKRKGSDPATFLVADEGFNPYVAVVITRAALWKENPERVRAFVRAVRQGWRAYLDDPTQANAVMAKLNTSMDAETFIAAAEAQKPLIETAETKEKGLGVMTRARWETLAKQLVDLGILEKMPPIDDLLVAL
>CP012670.1|AUX24518.1|6685909_6686692_+|nitrate-ABC-transporter-permease
MRPTPLQAVAPPLAALALLLALWEALARALGVPAYLLPPPSDIARAGAADAAALLAGAATTAKAALAGFCLSAAVGVLAAIALASSRPLERALYPYTVFLQTVPIVAIAPLLVLWCGPGLRAVAVSAFIVSVFPVIANTLTGLRSVEPALRDLFRLYGARRLATLRKLELPSALPHIVTGLRIAAGLAVIGAIVGEFVAGFSEGGAGLGILVLSAYRQLRTDLLFAAVLLASGLGLALFGAVDLAGRRLLRRWHPSEINR
>CP012670.1|AUX24517.1|6685155_6685803_-|haloacid-dehalogenase
MFKAILWDNDGVLVDTEGLYFQATREALASVGVELTVEDYRRLFLVESRGAWHLASARGVDEAGLRSLAGARDRRYLELIARGDTLLPDARHVVSTLAARFRMAIVTSSQPEPFHRAHAATGLLRWFEFALTREQYARAKPDPEPYRVACARLGLAARDVLVIEDSERGLRSAKAAGLSCWVVPSPLTASSDFTGADETLASLREVLARLSGAWS
>CP012670.1|AUX24516.1|6684042_6685023_-|hypothetical-protein
MAPGGGISLVELVVLGWSSAAAPAPIPIRIDFDAPAGCSTAAAFYDALRARTDRVRLATEGERSWNVHVRLSRAGSGVHGELRVIHERGETDTRTVKGASCDTVVQALSLTASLAVDEVVAESAPPVPVAPPPAAPAPREPAPPVDAAREAPPFRLEIGAHAVLTQVVAPHVSFGGALAARMTQQRMDDVFSPSLGVALIHARNDLLQSAGNAAIQWTAAALAACPLRWQITGFLGVQPCATTAVGWLAATGRGVMYPESVVRSWWSAGGLVRAAASFGGGTAVELEAGISAPLVHRRFILLSPEVNVGETPVISPLVGLGITHLF
>CP012670.1|AUX24515.1|6683860_6684043_-|uncharacterized-protein
MQAPVITPAWPGNYGSMDVILTPCGRNTDPAGAWHLLRSSPGWSFSHPIHDHRVSCPLWS
>CP012670.1|AUX24514.1|6683252_6683879_-|ECF-family-RNA-polymerase-sigma-factor
MPPLVVSGSVGVGVVASAALPEMEPADTVPPAVRSSERDRRLRRLVDAHVDFIGRVLRNAGTPAAEIDDAVQRTFIAAARRLDDMRPGAEKSFLLQIALHVAAHARRSAARRREVPAAEPPDVVDSATPEQLTSQKRARQMLDQVLDQMDEDLRTVFVLYEFEEMSMVEIAGVLGIPQGTVASRLRRARADFRERVRALELVTSEGKR
>CP012670.1|AUX24513.1|6682482_6683256_-|hypothetical-protein
MTEPRRLLEESDSQLERALLNAGVSYRVAPETRAKTLAALGIAGAATLSAAGLAAPPAISAAQTAASSTAVTATFGWTKVLVALSTVGALAGIPAGYLAWRAHHAPPPAALERFADALAGPISRATPRPPPPVPEAVQPEAPATPAPAERSAGRASTAARSGAKPSSASAALQTELKALDAARASLASGNAQGALAHLDAYGRAHPRGLLRLEAEVLRIDALARSGRREAATQRAEAFLRRHPNSVLASRVRRYINN
>CP012670.1|AUX24512.1|6681200_6682475_-|glycoside-hydrolase
MRCPALLRWLRGAFRTCCVCAALCVVPAAGCGTTVDSLGHDRPRESDDLRPLSGPDEYPNALRDVLGLTDEEIADRLDASFDQLFYGDPENEAIYVEVGDDQAYIEDVYHGDVRTEGIGYGMLIAVQLDKRDEFDRLWRYTKSELEFTSGPGEGYFLSKCDAWNGPVPCADPFGQQQIAMALLLAHGRWGSDTGSIDYGADALSVLEVMRYKEEQNGGVVDGVTNTFDTSTKLAFDFPHVASSKLTRPSNEMPAYYELWAQATGDPFWYEAAASAREYWKRVAHPTTGLTPVRAYFDGSPVLGADFFGSESYRTQLNMAIDHLWFGTEPWLVEHADRLLAFFSGQGIDKYVASYTLDGKAMVGGQMAALVTVNGVTGLVATTEERAAFIEAAWNEELQVGDARYYPGLLHLVALLTLSGQFRVY
>CP012670.1|AUX24511.1|6680606_6681038_+|uncharacterized-protein
MSARAPLPLGLQRPSAVEPPRAEGWPPPPHDPRERELALLVAGWEVRVFGGRKFAYFVTRGFWHLQLWHPEARVSVLTPSRLTRGLYEAYPIANWKAQAPDYDRLVTLLGGLVAAKLPDRATLLRLERALVTEVVRGSGGVLS
>CP012670.1|AUX24521.1|6690150_6691284_+|hypothetical-protein
MSHHTLSKLSYSIGKGLVYGALPLLSIAPALIPSPARAEGGWYGEVKTFAQLPAEPGYPEGIAVHGNRVFVSGAATFGTAGKGPSKIFVYDRDSKVHKTTIVVMGERLDEEHALSSIAVDGKGRVYALSTQLGLIRFTKVGPWYVQERYGRPLPDLPACVDVSPGTACSPTPFDMPPLPNDIVFDEAGNVYVSDSFQATVWRYCPGGGRPKIWFQSAALSGEVTQPFGANGLRLDPQRENVYVSVTFSLQDPGLGYIYRIPLVDDPDEADLEQVHRYEEGAAPDGFAFGSSGKLYVTLAGANAISVLDEDGNETTRIHSPPGASIPLDAPANVAFNDAAKTLLIVNHALFSGEPDHFAVLRVWVGDTADPLEKPWLR
>CP012670.1|AUX24522.1|6691315_6693712_-|hypothetical-protein
MTRSLAPSGDLSSLVVAIACAVAAVSFGLLVVELARARGRGDGAAGGLRAALGTALTGALAVLALLAAILRPVVVASRGSLVGPKVVVLVDGSRSMDLPGLAGTRRDSAAQALAELGKRADVRLSRYLFGEGAPLLSDGPMAGEGAAGTPASAPGAAGTPASAPGAASAPAPASGADAGAPAAAPPAPGRPQRRSDLSAALEALARAADERPAAFVVVSDGRLDRPGPDDTAAATRAALEGLDVPVHTVAVATEAVRDAGVRAVRTSGAAVAHQPLSLRIDIGCSGGLACAEVPVAVRELREQGAPTTLATGAARIEDGAGTVELGVTLDRAGTRILEVAIQAPDGDELPENDVRYITLDVARDRIRVLHVAGRPTYDVRALRMWLKADASVDVVAFFILRTPGDEVNASSDELALIPFPVDELFSVHLSSFDAVVLQDFDAAPYGLTKHLPALAQYVEKGGGLIMVGGPNAFVQGNYARTRLARVLPVDLDIGRGPAVDLGAFAPRITAAGRTAPVLAPLLALTGERMPEMPGTNVVGDPLPGATVLMTHPTRTTASGAPMPVLALGEHQSGRTIALTLDGSHRLLFSAFASSSAGRAHGAFWDALLGWLMRDPRFEPATIEPRGGCIAGEETALVLRPLAGQRGEAKVTITRLGGGAVVRTLGARVGDGGEPVELAAGRFEPGGYAATVEIAPAGGAAGDGGDPKRATTRRDFACERGGDEWADPRPDVARLEAIARATGGASVLPPAAASLPLPAATQVASERHVAPLLPPWAWTLAAAVALGAHWIVRRRGGLA
>CP012670.1|AUX24523.1|6693794_6694622_-|hypothetical-protein
MRPARALRPRRLAAAALVLVSALLLSAIPRPVRAFGEEGAWNPRPLLTGNARWEGVRATAPARWSFELERRTSAPARRSPTTVRADDPALLAEPFAFWGGAGDIPPLTAREVFGLRRFLALGGVLLVDDFAPERGEFGRAARRELARVLPEGSPIPIGTENVVFRSFYLLKRAVGRVAGPEKLSAIVRGGMPQVIFSDHDLAGALARSETGGASVEVTPGGEAQRERAFRLAVNIAMYVLCSNYKDDQVHAPFLMRRRAVDDARPRATPALPGLP
>CP012670.1|AUX24524.1|6694630_6695269_-|hypothetical-protein
MPRAHASLLALLLPLSSAAAACAPSLPDPKEAVQAYAAAAARGDADAIYGMLSERSRTALSREEVRRRVAEARAELAEQARSVTAPGVVIKTHARVRYPDGEIATLELDERERAFRISAADALPAGGRTPEQALEQLRRVLARRSYAGLLRVLTPATRGAIEGDLRSLVEGLAQPEGLEVRIAGDSATVQIPGGHEVKLRREAGVWRVEDFD
>CP012670.1|AUX24525.1|6695409_6696876_+|N-6-DNA-methylase
MTDVVGKLWGFCHTLRHDGIDYGDYIEQITYLLFLKMADERGIDLSRVEHRTARGKVEVTDCSWPALRAASGQALLDRHAEILRRLGEAPGVLGEIYAGSQQRFKSPLNLRKLIDLIDDVSWTRLGVDVKAAAYEGLLEKAAAEGKKGAGQYFTPRALIRSIVRCMRPDPRKKRGFTLCDPACGTGGFLVAAYEWLAAEANGALGRDVARRVKAEVFHGTELVARPRRLALMNLVLHGIEPKIALGDAIYDPPTGARFDVILTNPPFGTRGARQAPARDDFAIATSNKQLNFLQHVMTLLKPGGRAAVVLPDNCLFADQAGEVLRVLTEGCDLHTVLRLPRGTFTPYCPGVKANVVFFTKGAATEEVWIYDARTNVPSITKKGRPLSPAHFEEFERCYGDDPDGRARRDAGSSTDGRFRRFTRAEVEARGFKLDGLRWLREESLDDIDDLPEPEELATDAIQELEGAIAALSRVLVLLDGGAPKAAEE
>CP012670.1|AUX24526.1|6696872_6698204_+|subunit-S-of-type-I-restriction-modification-system
MSGRLPEGWCETTLAALCSHRSGSSKLIKGKLHAEARPGRYQAFSASGPDVWRDTWEHEGEAIVVSAVGARCGKAFKARGRWSAIANTHVVWPDTRVLDLDYLFLHLDDEGFWAKGGTAQPFVKVRETFARPFPLPPLAEQRRIVAKALAALAEVGAARAGLARAARILRRFRQAVRAAACSGKLTEAWRASGPAPEAATTAEELWGSLRAASRADRDALERDVPASWAVCPFGALVDNHDGRRVPVKSAVRRRRKGPYPYYGASGIIDSIDDYLFDGDYLLVAEDGANLLSRSTAVAFPASGRFWVNNHAHVVQPKAGVVLGYLELSLNSLDLQRHVTGSAQPKLTQAALNGIPLPVPPEEEQAEIVRRAQALFALAAAIERRVVAAAARADRLPRAILARALSGELVPTEAALARAEGRGYEPAGALLGRIRGERADPEAS
>CP012670.1|AUX24527.1|6698200_6698872_-|transcriptional-regulator
MKAAALVKDIREELRNIDDRLRDHPYPDAIARGDVTLEGLRAFPGHQHHVALSDLRSMATMLQRFADTPFRDFWSGVLLGELAAPGGIAAMGRKLGMTPDDLDRYEVTAEGFAYAAQMAWAAANASAAEIACALLINFPAWGFNCGRMSRALRERHGFEPEHTAFLDAFAALPSFEDTAIAILQDGLDRGVEPRAVRRTTRLFQAYEKMFWDAMLALGAQRAR
>CP012670.1|AUX24528.1|6699167_6700205_+|hypothetical-protein
MIFLCESARFTLTCLSCLALATATTVAATGCSDDADGVSTTEGAGGGGAGGATSVSSGAGTTTTTGAGTTTTTTTTTTTTGAGTTTTGAGTTTTGTTTASSTSATTGTGEPATSSSSTTTTGVGGGTPTGACPASATFCSGFEGEGLPDGATYRPSYQQADALKNMEIDSSIFFAGSRSLHVKPGGSGYDWRMLSVDTPGPTFWVRLYVRSSVDIGQAEHNAYFQAMTGTGEPNEGHNVEVAEQYCQIVLNLHDAVVLSEGGSTACGSGGVSLPKDTWHCMEAYFDGTKGDVQVYANGDKIIDKTGWEKLDFKSFSFGYLGFHGPARSMWYDDVAVAPERIGCAP
>CP012670.1|AUX24529.1|6700324_6700558_+|hypothetical-protein
MIDAMAYFVFRNFPDNTPIPDDCYGCDGTPDWAALLEWICPELSRDEAERLAAIGEASGRGPNLAGLKRLVEEHARP
>CP012670.1|AUX24530.1|6700665_6702327_+|phospholipase-D
MGRILDPRRHTWCVTPVEDMGLLVDADEYYPEFYRVASKARRVLLLAGWQFDSDVALLRGGREERVSTPITLLKFLDDLCEKRPDLQIYILAWDFHLVFALEREWLQQLVFQWTNHRLHFLFDSSHVERASHHQKFVVADGELSFLGGLDLCDHRWDDRRHANKNPLRVSRGAPHKPFHDVQAYLRGREVARALTELFLDRWRRAGGAPIVLPDLEGAERTFAGDRPEGGIPVPAREVTLSRTDPRGAPTGAAPVTEIRDLFVDAIGAAERFIYIETQYFTSHVVADALERRMRAEGRPVLDIVLLLNMEAETVKEQIAVGLSQAKVLGRLRAAAAETGHHLGVYYTLPDCGEDETAERATYIHSKVMIVDDRFLTVGSANLTNRSLSIDTELNASVETDDPGDALGRGIRRARASLLGEHLGGPDFDRTEDLVAHLDALASPPVGPRPPGTSCRLRRHPSPTEDERALLEVIDPHQLPFDPAAVEDIDRRQGSLFVGGLGALFRHLVGLDAQAAERESESESERDNERNERNERNERNEHNERNERNERETK

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Crispr_ID: CP012670_38

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_38

7119736-7119850

Orphan

Consensus_repeat	Method
CCGGTGAGCCCCCAGGGGCCCCACCACCTCCCCGGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_38

>merge|CP012670|38|7119736-7119850|CRISPRCasFinder
CCGGTGAGCCCCCAGGGGCCCCACCACCTCCCCGGGGGCCTGCCGTCTCGATGTCCTTGTGGCTCGCCTGGCACTTCACCGGTGAGCCCCCGGGGGCCCCACCACCTCCCCGGGG

>CP012670|38|35|7119736-7119850|CRISPRCasFinder
CCGGTGAGCCCCCAGGGGCCCCACCACCTCCCCGGGG	GCCTGCCGTCTCGATGTCCTTGTGGCTCGCCTGGCACTTCA
CCGGTGAGCCCCCGGGGGCCCCACCACCTCCCCGGGG

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX24875.1\|7117591_7118449_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273159
CP012670.1\|AUX24878.1\|7120733_7122215_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX24886.1\|7128918_7130268_+\|transposase	unknown	unknown	gnl\|CDD\|366234
CP012670.1\|AUX24881.1\|7124337_7124922_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX24867.1\|7108152_7109631_+\|ribosome-associated-GTPase-EngA	unknown	unknown	gnl\|CDD\|234628
CP012670.1\|AUX24883.1\|7126134_7126683_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX24868.1\|7109836_7110907_+\|2-dehydro-3-deoxygluconokinase	unknown	unknown	gnl\|CDD\|238571
CP012670.1\|AUX24882.1\|7124968_7125667_+\|phosphoribosylanthranilate-isomerase	unknown	unknown	gnl\|CDD\|238237
CP012670.1\|AUX24876.1\|7118618_7119593_+\|metal-dependent-phosphohydrolase	unknown	unknown	gnl\|CDD\|131739
CP012670.1\|AUX24877.1\|7119885_7120620_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX24884.1\|7126747_7127515_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX24870.1\|7112379_7112901_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX24871.1\|7112972_7113698_+\|protein-tyrosine-phosphatase	unknown	unknown	gnl\|CDD\|226870
CP012670.1\|AUX24880.1\|7123659_7124127_+\|alkyl-hydroperoxide-reductase	unknown	unknown	gnl\|CDD\|239315
CP012670.1\|AUX24874.1\|7116799_7117303_+\|phosphohistidine-phosphatase	unknown	unknown	gnl\|CDD\|224973
CP012670.1\|AUX24872.1\|7113841_7115263_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|270916
CP012670.1\|AUX24869.1\|7111035_7112262_-\|ATPase	unknown	unknown	gnl\|CDD\|223082
CP012670.1\|AUX24885.1\|7128146_7128977_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX24879.1\|7122341_7123556_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270916
CP012670.1\|AUX24873.1\|7115612_7116779_+\|recombinase-RecA	unknown	unknown	gnl\|CDD\|236476

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX24875.1\|7117591_7118449_+\|hypothetical-protein	gnl\|CDD\|273159	TIGR00592, DNA_polymerase_alpha_catalytic_subunit, DNA polymerase (pol2). All proteins in this superfamily for which functions are known are DNA polymerases.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	0.00110374
CP012670.1\|AUX24886.1\|7128918_7130268_+\|transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.96484e-22
CP012670.1\|AUX24867.1\|7108152_7109631_+\|ribosome-associated-GTPase-EngA	gnl\|CDD\|234628	PRK00093, PRK00093, GTP-binding protein Der; Reviewed.	0
CP012670.1\|AUX24868.1\|7109836_7110907_+\|2-dehydro-3-deoxygluconokinase	gnl\|CDD\|238571	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.	5.1215e-80
CP012670.1\|AUX24876.1\|7118618_7119593_+\|metal-dependent-phosphohydrolase	gnl\|CDD\|131739	TIGR02692, putative_tRNA_nucleotidyltransferase, tRNA adenylyltransferase. The enzyme tRNA adenylyltransferase, also called tRNA-nucleotidyltransferase and CCA-adding enzyme, can add or repair the required CCA triplet at the 3'-end of tRNA molecules. Genes encoding tRNA include the CCA tail in some but not all bacteria, and this enzyme may be required for viability. Members of this family represent a distinct clade within the larger family pfam01743 (tRNA nucleotidyltransferase/poly(A) polymerase family protein). The example from Streptomyces coelicolor was shown to act as a CCA-adding enzyme and not as a poly(A) polymerase. [Protein synthesis, tRNA and rRNA base modification].	4.44103e-44
CP012670.1\|AUX24882.1\|7124968_7125667_+\|phosphoribosylanthranilate-isomerase	gnl\|CDD\|238237	cd00405, PRAI, Phosphoribosylanthranilate isomerase (PRAI) catalyzes the fourth step of the tryptophan biosynthesis, the conversion of N-(5'- phosphoribosyl)-anthranilate (PRA) to 1-(o-carboxyphenylamino)- 1-deoxyribulose 5-phosphate (CdRP). Most PRAIs are monomeric, monofunctional and thermolabile, but in some thermophile organisms PRAI is dimeric for reasons of stability and in others it is fused to other components of the tryptophan biosynthesis pathway to form multifunctional enzymes.	9.49682e-51
CP012670.1\|AUX24871.1\|7112972_7113698_+\|protein-tyrosine-phosphatase	gnl\|CDD\|226870	COG4464, CapC, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	1.37094e-35
CP012670.1\|AUX24874.1\|7116799_7117303_+\|phosphohistidine-phosphatase	gnl\|CDD\|224973	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms].	1.91804e-19
CP012670.1\|AUX24872.1\|7113841_7115263_-\|uncharacterized-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	4.47e-74
CP012670.1\|AUX24869.1\|7111035_7112262_-\|ATPase	gnl\|CDD\|223082	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning].	1.27581e-32
CP012670.1\|AUX24879.1\|7122341_7123556_+\|hypothetical-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	4.47329e-90
CP012670.1\|AUX24880.1\|7123659_7124127_+\|alkyl-hydroperoxide-reductase	gnl\|CDD\|239315	cd03017, PRX_BCP, Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides. The protein was named BCP based on its electrophoretic mobility before its function was known. BCP shows substrate selectivity toward fatty acid hydroperoxides rather than hydrogen peroxide or alkyl hydroperoxides. BCP contains the peroxidatic cysteine but appears not to possess a resolving cysteine (some sequences, not all, contain a second cysteine but its role is still unknown). Unlike other PRXs, BCP exists as a monomer. The plant homolog of BCP is PRX Q, which is expressed only in leaves and is cellularly localized in the chloroplasts and the guard cells of stomata. Also included in this subfamily is the fungal nuclear protein, Dot5p (for disrupter of telomere silencing protein 5), which functions as an alkyl-hydroperoxide reductase during post-diauxic growth.	1.9559e-57
CP012670.1\|AUX24873.1\|7115612_7116779_+\|recombinase-RecA	gnl\|CDD\|236476	PRK09354, recA, recombinase A; Provisional.	0

>CP012670.1|AUX24876.1|7118618_7119593_+|metal-dependent-phosphohydrolase
MQQILTQEASPGRAMEALEWAVQRAERADVAPPGTSAEVRPSPRVISGSPADFRAAASLYLPDVRKLLDRIMMSEDAEAGLDALLESGALAAMLPEVQAMVGFGDGEWRHKDVWKHTKQVVRQAVPRLEVRWAALLHDIGKTRTRSISPTGEVHFFGHAEVGARMFDKIDRRLPLFTKEASLKGSIRFLILHHLRASQYDASWTDSAVRRFAKEMGACLNDVLDLSRADITTKRPEKKRRGLKQIEELAERVLQVQAEDAVVPPLPSGIGDAIMKAFGIPPSRRVGEIKRGLEEAVEAGEVPSHQDAEVYLAFLRENAARFGLV
>CP012670.1|AUX24875.1|7117591_7118449_+|hypothetical-protein
MAGQMVFPFAQPPPGRLSRAGGKGAPLSLWPRVSRAVVRVPDPRHHQFHIDLPAGQPQIYVHEGARQALIRRLELAQKRPVLLSVTDNYRQMISSSLREGILQARVHHMFLDAPAVVQEALVRYVVTQDRAASLVVGRYIDENGHRIRASRPVSTPLTTQGRTHDLLSLFQKLNLSYFGGAVDALITWGKRTKAKKPRRTIKLGSYSAVERLIRIHPVLDRPWVPRYFISYVIYHEMLHHVMPASHGNGRRMLHPPQFLARERLFRDYERALAWEQAHVTRLLRT
>CP012670.1|AUX24874.1|7116799_7117303_+|phosphohistidine-phosphatase
MHLYVMRHGPAEERSPTGRDADRRLTSEGRERVRRVSLELRRLRGGAPLPRLLSSPLARARETGEITAPICDAPEVELRDELSLDADLPLALVASLARGGADALLVGHQPSVEHLVRTLVDAPGRAATGMRLRGFVTALVVALEPEAAPHADGRWRIAQILDPHALG
>CP012670.1|AUX24873.1|7115612_7116779_+|recombinase-RecA
MSDEKNTKQKSAALELAIASVEKEYGKGAIMRLKDGQTLHDEVAAVPSGSLGLDIALGIGGYPRGRIVEIYGPESSGKTTLTLHAIAAIQRAGGTAAFIDAEHALDVNYAKKLGVKTDELLISQPDYGEQALEIADMLVRSNAVDIIVVDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTGTTSRSQCLLMFINQIRMKIGVMFGSPETTSGGNALKFYASVRLDIRRIGAIKEAAAGGKEPSVVGNRTRVKVVKNKMAPPFREVEFDILYGQGISHSGDVIDLATEANIIEKSGSWFSFQGERIGQGRENARNYLEQHPAVLDKIEGLVLAKHGIARAGSNAGAKAGANGAEAPAPARGREAAGREGASSGPDARRGAGKTN
>CP012670.1|AUX24872.1|7113841_7115263_-|uncharacterized-protein
MGDGGRLYPGFTLGRYELVLRVAAGDMGEVWAARLRREHGFQKLFAIKLLRPELSPDPEVVRRFLDEAALAARIRHPNVVPVVDLGAQDGVLFQVMEWVSGEPLSSVLRAARGRPAPVLAAARIAYQICAALDAAHELRDELGNPRELVHYDVSPDNVLVTSEGLVRLVDFGIAKFEGERLSERCLGAARGDRGRAREAAGREEGAFLFRSSAPYMAPEHIRGQPCDRRADLFGVGLLLYELLSGAHPFQADDSESTMTHIASERPAAPLSSRAVPSRRGLAERLSSAPPPEPIPPALDRLVSEALAKSPTARTATASQLMRALEEAVPGSAHPGNDAMVAAWIGQLLGGASHLRTQRLRAALEALDPVSEAGEEAEPGPRPRIWVQAVWALGVVVAGCALAGTAAVGHGSLRSLQLISPAASAGGNAGASVNAGTSVNAGAGVNAGASGHAERSVSAPPRGPRAAATTAPRR
>CP012670.1|AUX24871.1|7112972_7113698_+|protein-tyrosine-phosphatase
MRGFIDLHSHWVAGIDDGARTVEESLALLTALRAAGFDTVVATPHMRPGMFDNTQQSLRAAYDATCAALAGARDLPAVALSSEHFFDDIVFQRLLAGDALPYPGGRAALVEFPNRSFPLRAAERLFDLSRRRLRPVLAHPERYEPVFADPTSLDPLLDAGAVLLLDVAALAGKYGRTPRRAAERLLDEGYYYAACSDAHAARDVADVRAGIEALFARVGEEEARFLLIDGPRAILEGRVEA
>CP012670.1|AUX24870.1|7112379_7112901_-|hypothetical-protein
MSLSLSNQELMPQPGAGGCAGGQRGDGSGGGARRPLDPGAPCAGEGAPASERRRRRSDDPITALHYQLSTTRAEANLDVVVLVDDSGCLVAGAGAWPACEELAAYAPLLANRDAVQSAAVDSRIAVLTQDVEVQSLSVEGAEVLLCGRGGTAARAASIARAAEGCLRILRAAA
>CP012670.1|AUX24869.1|7111035_7112262_-|ATPase
MSGPPAPSRETPPAVPAPHPADGVGLAPLLTSRRVILCVGCGGVGKTTTTAALGLAAARRGKRVLCLTIDPARRLSQSLGIEEMKTEAQTIEPARFARAGLDVPGSMTVMMLDTKSTFDSLVASLAPSPEHRDRILNNVLYKYISTSLAGTQEYMAMEKLYAVRSDPRYDLILLDTPPTANALDFLDAPERLVGAIDSAATRWFVQAFQSSGKLSLNLLARSTAAVLRGIGKLTGSGFLEQIAAFISEMNAVFGGWKQRADAVASALRGPDVAYVLVTTPDPLCVREVLYFADRLRAQDMRRDAFVVNRVHPVYGALPGAAEIAAALDGSGLALDPGAAARLLQAAEDESRMGKLDHLNLMALEAALEDEQSGGSVRADVPAFPYDIYDVAGLARIADVLAPLPGAAG
>CP012670.1|AUX24868.1|7109836_7110907_+|2-dehydro-3-deoxygluconokinase
MLLELGAPGRDEVGAEQAERRRRMRHGKVVTFGEVMMRLSTPGFARLAQAGSFDVVYAGAEANVAVSLAHLGVPAEHVTRFPENDLGAAAVRTLRGHGVATERIVFGGERMGLYFLENGAAHRASRIVYDRAGSAFAHIAPGMVDWDGALAGAAWLHWTGITPAISQGAADVCLEALQAARRRGVTVSGDINYRRNLWQYGKTAREVMPALIQLTDAIVAGVGDLENCVGITGATYEEACQRAMEAYPNVRKVASTEREVISSSHNAISGVMWDGERLLRSKEYDLIPIVDRIGAGDAFMAGLIYGWMAGKDDQRALDFATAACAFKHAVEGDVNLAAPAEIEALVRGENVGRLLR
>CP012670.1|AUX24867.1|7108152_7109631_+|ribosome-associated-GTPase-EngA
MSASKPALPRSTRRGQGAAGGGRSAKKGLVEEEVVALEDDGPATASPQSPSFGIVALVGRPNTGKSTLFNRLVGKRAAIVHDEPGVTRDRHYGDVTSRGRRFTLVDTGGFDPESDDPMRQGIKRQIDLAIAEADVIVCVLDAVTPVTPSEHAELGLLRRAGKPVIYVANKADSPRAEVEAAELYRLGMERLIPISALHGRGISELEMAIEAALPKEPVTPAESAEEALRIAIVGRPNAGKSSLVNRITGEERMLVDAQPGTTRDPIDTLAERDGKRLLLIDTAGIRRKAKVAKEDSAVEAVSVLHAIRAMERAEVVVLLCDAADGVAEQDAKILGLAVDRGRAIVIGLNKIDLLDRKALAKAEADARDKLAFVPWAPVTHVSARSGRGVAKLIETVGRVADAYRRRVPTGELNRFFEQILLTHPPPTHGGRAPRLFFITQAETSPPLFVVVASDPDKIHFSYRRYVANQLRQAFGLEGVPVRVKYKERRRRG
>CP012670.1|AUX24877.1|7119885_7120620_-|hypothetical-protein
MAADRPVKRKRRGSGSTGQGGGSFLRQRTDPRSERRFEPKASLELGLTLLGMSVAALLAGAGVYGQWFRGDEAGAHPYAPYLLLGAFLLGAAAGLFGQWSMKAIRVGDAGVAVENGPTEIERIGWNEVTGLLLTETALTVQGSGTAIAIPLRAHLPAASRVLAEVRKRIPGGAVDIEEGALPAPDDAAGEVRPLEPPQVAGLRCKATDKLIAFEADARLCGRCGEVYHKEGVPERCATCEAPLR
>CP012670.1|AUX24878.1|7120733_7122215_+|hypothetical-protein
MTAMFRAAILGLPALSIGLAALVLLGPGAPRGVTFVRVWGAPVAGSEALSLRLEGVRRLHGADDPAALSGIEVSATSAGSPLDPWTGSTGSDGVGEALLRAPGGLEEPVVVRVARDDDAGALLEARVPLLEARVPLLPPPRAAGTPAAGTPAAGTPAAEAAPLPGVTRGALRLRVTAARGVLAAPFPELVRVVVETESGAAVAGARVEASAVGADLDGQGSGPALVEADARGAASLTVTPRSHAVELTVRATPPAGARPGSPATPGATGTWEGRLPVIPGAIWLDPARLAGDPPALRLISPAPRTRAYVSLGDARGRLLGAVVPLAPDGAGFSSGELALPGEPALRATGWVVVASDPREQGAGAVAWPLSPAAAAATPRRVALLADGWPAAEARERARASRARRRGLLVLGAAAAAEMLLLAIEARSARRRLAAHLAAASGGAGEGGGPAPLSSEDRGRVLAAARAEPLLSALALAALVGLSFAAVAALATFR
>CP012670.1|AUX24879.1|7122341_7123556_+|hypothetical-protein
MSEQQRYRVIKRLASGGMAEVFVAESAGIEGFKKQVAIKRVLPQLSKKEQFIAMFLDEARLSAHLSHSNVVSVFDIGVGDGTYFIVMEYVDGADLRALLEHQKKLGRPMNVEVASFIAAKMCQGLAYAHELCTADGKPLQIVHRDITPANVLITRYGEVKIVDFGLAKASSQLAESDAGIIKGKFGYLAPETVLEQGVDQRVDIFALGIILWEMLAGRRLFLGDSDYITVRLVRDAVIPSLQQINGEVPHELEQIIRRALARDPAARYRTARELGRDLTRFLYRHGRPVSEYDVAALVERAKGGPARAVDGTQKIAELIDMMLLEFKSLTKEPNAGGGGSGLSLLPSLDTTTSLLHMPTHSSSSPPGSDGPLGGLADELEGPESLHEDEASSSVAAWFRGLIPR
>CP012670.1|AUX24880.1|7123659_7124127_+|alkyl-hydroperoxide-reductase
MNVEVGKPFPRFALPNQDGKVVRLEDFAGKWLVVYVYPKDDTPGCTVQGKSFTASREEFDRANIAVVGVSEDDVASHKRFCDKFSFTIDLLADPKHELLEAAGVGQSEWKGTLYWDRTTFVVDPSGVLRKTYLKVKPEGHERALLQDIQELKAQA
>CP012670.1|AUX24881.1|7124337_7124922_+|hypothetical-protein
MLSLDLSEGHPYPVAFVVARPPPGRASALAAFPALIVAAFATAVAVGACKGPGGGGTGGAGSGGAGGCPSVREAMFTITVRAPEGPVPPDTTVHIAWSAADEPTFVLNDKNTWKTLEDANLVCAVDPTKPPPDALEALVCELWTAGVTRVEISGTGYQDFEQTLTPVMSEECEAFIPQTVDIELVPVVDEGIEE
>CP012670.1|AUX24882.1|7124968_7125667_+|phosphoribosylanthranilate-isomerase
MEDMIQVAGVIDADEAEMLVACGVTHLGFPFRLPVHREDLSERAAAEIIAALPASVHGVLITYLDTAAEIASLAGELGVSWVQLHGSVEVAELERLRAERPALTIIKSLIVRAGNAAGMNTEVARYEPWVDAFITDTFDPETGASGATGKVHDWDVDRRIVARSRRPVIAAGGLRPSNVGDVIRAVRPAGVDVHTGVEGPDGRKRRELVEAFVAEARRGFASIGGGAAAARG
>CP012670.1|AUX24883.1|7126134_7126683_+|uncharacterized-protein
MQNKVGNVVPSEKLVHGLVEELSSLEEKVKKFTVELTAEERKATTKMRTGGEPIARLVGDLAEANGVTLPKISVEGMRADLLLIERMKPLQAALDDLSQRVADTILQAQSEAWWAATAYYTTLSRMAAADAKLERSLKPAVEFFAIGRRKKTAEQPADKKPVELPADRKPVEQPAAPVNGDL
>CP012670.1|AUX24884.1|7126747_7127515_-|hypothetical-protein
MSAHEYELIVEQSVKFLDRRPNAPSFDLRSCFKSLYDFQSRYDTGFTHLRVIGPLVKHRFVYAFGVEDHPGYERYRGVLQELRGFCEVLRDPTRPWDDATNPTIGHYCDPVEEWGDDYAESFPPELRRGRLYVEAGGELWRAFVDAGKLTGADAVPPQEIPIQRVVALIAREAASCGDGLLVRMWLPLLCYDLASLGRASLSADPDVQTVRRIAKAMDVLSIRSEDLEYGALQLPPEDIVEDEDTVRWWLALEDV
>CP012670.1|AUX24885.1|7128146_7128977_+|uncharacterized-protein
MAACPLPSCSESLERAEPSTDRPSGPRCQRLDRVTAHRRARAASSLPSLRRGGMPAGGHVRAVGPRDAVAAGARAARRWRARRARHDRGAPLSVPPLQRHDHGRAAGRRSATALRRNGDRSGSSARRHCRCSAHRGAAACQPLVCQLRCRQLGDRAALVMRHRPEAPLSVGPPQSPRFFAAAASRAGRDDARRDGAICRRRPRGRRHGRRRAGCVMASGVLAGLMSGPTRLDPRSAERLALGWLCGRCGVTGAERTRRARPPQAQGPRGSGGALSQ
>CP012670.1|AUX24886.1|7128918_7130268_+|transposase
MQDPLKPKDHAEAVALYRSEIIGSLMHRELDRGELAEALADLSKQRFRPPRAHSPRSYSVPTLERWYYAYKTEGLEGLRPKSRKDKGRARELTPEQRQMLLDIREEHPSASVSLILDTLIAAGRIDKGAISATTVRRLYAEHHLDRVALRERTGGKVRLRWQAERPGALWHGDVCHAAPILVDGRPAPVRIHALLDDASRYILAIEAMSAEREVDMLALFIRALRKHGAPDALYLDNGSTYRGHTLHLACERLGTTLIHARPYDAPARGKMERFWRTLRERCVDFTGALGSLHDLNVRLYAWVDEHYHRTPHAALFGKSPAQVYEEYPHVTDGLDERKLRDALTTQARRRVRRDSTLSMDGEDWETDLGFLAGHLVTVSRCLVTPNEPPWIEHEGKRFALHRVDPVKNARRARPACNLDVAHEARVPFDPPKALLDKALGRTPRGDEEG

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Crispr_ID: CP012670_39

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_39

7664001-7664067

Orphan

Consensus_repeat	Method
GCCGGCTGACGTGGCCGTGGTCGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_39

>merge|CP012670|39|7664001-7664067|CRISPRCasFinder
CGTCACGGCCGTGGCCGTGGTCGTGGTCGTGGCCGGCTGACGTGGCCGTGGTCGTGGCCGTGCTCGT

>CP012670|39|36|7664001-7664067|CRISPRCasFinder
CGTCACGGCCGTGGCCGTGGTCGT	GGTCGTGGCCGGCTGACGT
GGCCGTGGTCGTGGCCGTGCTCGT

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX25341.1\|7673764_7674685_+\|transposase	unknown	unknown	gnl\|CDD\|224854
CP012670.1\|AUX25336.1\|7664450_7666658_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|378045
CP012670.1\|AUX25340.1\|7671071_7673324_+\|heat-shock-protein	unknown	unknown	gnl\|CDD\|214643
CP012670.1\|AUX25342.1\|7675113_7677081_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|173792
CP012670.1\|AUX25344.1\|7677924_7679322_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227274
CP012670.1\|AUX25339.1\|7669098_7671075_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214643
CP012670.1\|AUX25332.1\|7657802_7659005_+\|von-Willebrand-factor-A	unknown	unknown	gnl\|CDD\|226346
CP012670.1\|AUX25326.1\|7648336_7650640_-\|dTDP-4-dehydrorhamnose-reductase	unknown	unknown	gnl\|CDD\|187564
CP012670.1\|AUX25338.1\|7667615_7668911_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|377085
CP012670.1\|AUX25343.1\|7677400_7677928_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX25329.1\|7653255_7655136_-\|glycoside-hydrolase-family-2	unknown	unknown	gnl\|CDD\|236657
CP012670.1\|AUX25345.1\|7679781_7682097_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378649
CP012670.1\|AUX25335.1\|7660854_7663908_-\|B12-binding-protein	unknown	unknown	gnl\|CDD\|188475
CP012670.1\|AUX25330.1\|7655648_7656797_+\|phospholipase	unknown	unknown	gnl\|CDD\|234967
CP012670.1\|AUX25331.1\|7656960_7657800_+\|ATPase-AAA	unknown	unknown	gnl\|CDD\|223786
CP012670.1\|AUX25328.1\|7651761_7652901_-\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|340856
CP012670.1\|AUX25337.1\|7667040_7667400_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX25333.1\|7659047_7659881_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368559
CP012670.1\|AUX25327.1\|7650636_7651758_-\|UDP-galactopyranose-mutase	unknown	unknown	gnl\|CDD\|223636
CP012670.1\|AUX25334.1\|7660038_7660803_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|236901

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX25341.1\|7673764_7674685_+\|transposase	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	0.000554343
CP012670.1\|AUX25336.1\|7664450_7666658_+\|uncharacterized-protein	gnl\|CDD\|378045	pfam08757, CotH, CotH kinase protein. Members of this family include the spore coat protein H (cotH). This protein is an atypical protein kinase that phosphorylates CotB and CotG.	5.91238e-65
CP012670.1\|AUX25340.1\|7671071_7673324_+\|heat-shock-protein	gnl\|CDD\|214643	smart00387, HATPase_c, Histidine kinase-like ATPases. Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases.	1.46983e-11
CP012670.1\|AUX25344.1\|7677924_7679322_-\|hypothetical-protein	gnl\|CDD\|227274	COG4938, COG4938, Uncharacterized conserved protein [Function unknown].	1.41993e-20
CP012670.1\|AUX25339.1\|7669098_7671075_+\|hypothetical-protein	gnl\|CDD\|214643	smart00387, HATPase_c, Histidine kinase-like ATPases. Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases.	0.000535352
CP012670.1\|AUX25332.1\|7657802_7659005_+\|von-Willebrand-factor-A	gnl\|CDD\|226346	COG3825, COG3825, Uncharacterized protein conserved in bacteria [Function unknown].	7.4599e-105
CP012670.1\|AUX25326.1\|7648336_7650640_-\|dTDP-4-dehydrorhamnose-reductase	gnl\|CDD\|187564	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs. dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	3.12694e-73
CP012670.1\|AUX25338.1\|7667615_7668911_+\|uncharacterized-protein	gnl\|CDD\|377085	pfam03631, Virul_fac_BrkB, Virulence factor BrkB. This family acts as a virulence factor. In Bordetella pertussis, BrkB is essential for resistance to complement-dependent killing by serum. This family was originally predicted to be ribonuclease BN, but this prediction has since been shown to be incorrect.	4.36417e-39
CP012670.1\|AUX25329.1\|7653255_7655136_-\|glycoside-hydrolase-family-2	gnl\|CDD\|236657	PRK10150, PRK10150, beta-D-glucuronidase; Provisional.	2.83346e-34
CP012670.1\|AUX25345.1\|7679781_7682097_-\|hypothetical-protein	gnl\|CDD\|378649	pfam11369, DUF3160, Protein of unknown function (DUF3160). This family of proteins has no known function.	0
CP012670.1\|AUX25335.1\|7660854_7663908_-\|B12-binding-protein	gnl\|CDD\|188475	TIGR03960, radical_SAM_domain_protein, radical SAM family uncharacterized protein. This model describes a radical SAM protein, or protein region, regularly found paired with or fused to a region described by TIGR03936. PSI-BLAST analysis of TIGR03936 suggests a relationship to the tRNA pseudouridine synthase TruA, suggesting that this system may act in RNA modification. [Unknown function, Enzymes of unknown specificity].	0
CP012670.1\|AUX25330.1\|7655648_7656797_+\|phospholipase	gnl\|CDD\|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	2.93508e-89
CP012670.1\|AUX25331.1\|7656960_7657800_+\|ATPase-AAA	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	2.62412e-37
CP012670.1\|AUX25328.1\|7651761_7652901_-\|glycosyl-transferase	gnl\|CDD\|340856	cd04950, GT4_TuaH-like, teichuronic acid biosynthesis glycosyltransferase TuaH and similar proteins. Members of this family may function in teichuronic acid biosynthesis/cell wall biogenesis. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	6.79702e-145
CP012670.1\|AUX25342.1\|7675113_7677081_-\|uncharacterized-protein	gnl\|CDD\|173792	cd04843, Peptidases_S8_11, Peptidase S8 family domain, uncharacterized subfamily 11. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	7.51718e-93
CP012670.1\|AUX25333.1\|7659047_7659881_-\|hypothetical-protein	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	4.45348e-06
CP012670.1\|AUX25327.1\|7650636_7651758_-\|UDP-galactopyranose-mutase	gnl\|CDD\|223636	COG0562, Glf, UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane].	1.07642e-177
CP012670.1\|AUX25334.1\|7660038_7660803_-\|sensor-histidine-kinase	gnl\|CDD\|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	7.29299e-37

>CP012670.1|AUX25335.1|7660854_7663908_-|B12-binding-protein
MDSLPLLSGHPYASFLDQVEKPARYAGGEVGSVVKDWSAVEARVCLAFPDVYDIGMSHLGFKILYKLLNDDPRTLAERCYAPWVDMEAELVKRGLPLVSLESARPLRDFDVVGFSLQFELTYSNILTMLHLGGVPLRAADRGEDDPLVIAGGPTATHPEPIAPFLDALVIGDGEAKASEVALTWARLKREGAPRRERLLAIARLGAVYVPSLYATRLDPDTGLEVVDRPLADGIPFPIERALVDLDQYPFPDESPTGGPEAIFDRMSIEIARGCTEGCRFCQAGMIYRPVRERDPEQIVDTVMRAVQKSGQDEVSLTALSTADVSCISPLIKKVTDRLTAERISLGVSSLRAYGLEPELLDELKRVRATGLTFAPEAGTQRMRDVVNKNVTEEQLLETAERVFRRGWGKMKLYFMIGLPTEADEDVRGIVETGARAAAAGRRAAGKGRPVDVTVSVSTHVPKPHTPFQWAAMDTLAEVGRKQQLLKDTVRPYRAVTLRTHEAHASVLEGIFARGDRRLADVLERAWQNGARFDSWDDQLKLSVWEEAFVRHGVDRARYLGTLPLTARLPWDHIDVGLEEGFLAREYRKALQNRLSPPCGKVAGTFVHHTNLEDARADTRRLVCYDCGVACDMTQMREERLTFLEKLGAHRRSLPLLPDDRAAPPAAGPAAEASPPAAEAPAAAAEAPAAAAEAPAAAAEAPAAAAEAPAAAAEAQPRAQKPKKAAPVRHGRGGIRYRVRFEKTGPMALLGHLDVVRELPRVLRRVGAPMTYTAGFHPKPDMTFSPALSLGVISLDEYVDLRLERDLDAAALDALAQAMTAASPRGLVFRAAVKLGPDDPALSKLIAGARYALAFARSAIGRDAEAILAARASAALAAPSLPIRREIERLAKMVDVRQYLVRAEVGGPDVLSALARAGLAGDLVALDVEVDIRGSGAVKSSEVAAVIAGEPGEAPGALVPPPHRAVRLELFGRTAPAGSAAPERFSLLDLARARRVKPAPERTQPPAPAADALAASAE
>CP012670.1|AUX25334.1|7660038_7660803_-|sensor-histidine-kinase
MDAPARRPLGARAIARGIGYAQRGRMTKEGSRTECCAARLAAAGAVGASVAHELRNALAVAESSLFLAQRDLDDRPRLMRHLDRVTSEIRKAHEVIGSVLGLARGEPLRREPAPVGKLIESARHALVLPTAVQFEVAVAPADLTLLCDPILLERVFSNLYLNAVEALDGAPGGSIVTRAWRGDERTYLEVEDNGPGVHPCVIDHLFEPLVTAKVKGTGLGLALSRIIIEAHGGEITATRGAGRGTAFRMWLPND
>CP012670.1|AUX25333.1|7659047_7659881_-|hypothetical-protein
MQQRARRRPTERGPFRVEHLRSGDPYELSNGHPIYCAPTGGRASGPNSLGSSVVGWDPAVKEVGVDTGYSLGPDTLRAPDVAVGNVPDRPGWVNGVPELAIEYADVGQDEAKLQQKIAELLAAGTRFLWVVRLNGPRRVEVHEPRKRVRVVLPGQMLSAPGVLKNALRVEALYDRSEAEKATLTNLLQRHGYEDLDAVLAKGREEGRDEGRDEGRDEGILEGKRDALRRVMGGRGLRLTKAATAKIASCRSERELDRWLDRALVAKTVAEVFKRAGR
>CP012670.1|AUX25332.1|7657802_7659005_+|von-Willebrand-factor-A
MFVEFLYELRARRVPVGAQEAVGLARALAAGLHDSSLDGFYHVARALLVHSEAHLDDFDLAFAKHFRGVPVEAKAVAEELLSWLRDPVKMRALSDEERAMIEELDLEEVLRQFEERLREQRERHDGGSRWIGTGGTSPFGRGGHHPSGIQVGGSAGGRGGALASADARRYRAYRSDVTLDVRQIEVALRKLRAFAREGGERELDIEATIDATARNAGEIEIVTRPPRRPSTRVILMMDVGGSMDPHAALVSQLFSAAKRATHWKELRSYYFHNCVYGRVFRTEGLREPVSVRELLHECGRHHKLVMVGDAAMAPYELLGASISGGGGLSALEADARAPGVAWLMMLRDHFDRAAWLNPDGVGPYPHPTVDAIKSIFPMFPLTLEGLGDAVAELVRGRGRA
>CP012670.1|AUX25331.1|7656960_7657800_+|ATPase-AAA
MSEFRRFRGTERYLTSEALEAAVNCALVLERPLLVKGEPGTGKTLLAEAIADSLSAELIPWHVKSTTRAQDGLYVYDTVQRLHDSRFGDGDVRDIRRYIKLGPLGQAFSAERRVVLLIDEVDKADLEFPNDLLHELDRMRFRIAETGDDIVARERPVVIITSNNEKELPDAFLRRCVFHFIDFPEPELMREIVRVHHPDLERTLADQAMQVFYEIRSNARLRKRPSTSELIDWIAVLRRAGVKEVKLEKALPFLGALLKKEQDLAALADQLAGGRRYRS
>CP012670.1|AUX25330.1|7655648_7656797_+|phospholipase
MSQPPPASTAPAFAEMTVGHHRLALLKDGAQAYPAMLAAIAGAQRTVCLETYILRSDRTGQRFAEALAERAAAGVEVSVLFDAWGSSVSSSFLDELRRAGVRPLAFRPIELSAPFGKVARRDHRKALIVDGAIAFIGGLNISDDYAAPEDGGAGWRDTHLRIEGPAAAELQYFFLRTWQRAGGPPVDGERYGYDARRPDPAVQIISNDLPRRRHRHGIRDAYRQAIERARRRIFITNAYFLPPLRIIHALAAAARRGVDVRIMVAGTTDVPAVLLASRAIYGHLLDAGARLFEWRGRVLHAKTAVVDGSWATVGSTNLDSQSLRMNIEANAVITHRGFAGAMERMFTEDLASCREITVARWIRRPLWERAASWTAYLARDWL
>CP012670.1|AUX25329.1|7653255_7655136_-|glycoside-hydrolase-family-2
MQEDMSSAGGREHGYPRPQLRRAGWTSLNGTWAFALDPEARWSKPSEVVWDRAIEVPFAPETERSGVGETGFFRACFYRRMFEAPDLRKGERLILHFGAVDYEATVWIQGSRVTQHTGGYTPFSVDITDYLTPSGPQEIVVRAEDDPAELTKPRGKQDWQLEPHSIWYPRTTGIWQTVWMERVPATSVAVVRWTSSLTRWELDFYVKIAGVRRDDLRLRLRLHSGGAVLADDTYAVVAGEVHRRIALSDPGIDDSRNLLLWSPDSPTLIQAEIELLGPDGEAIDRVLSYTALRSIAIQGDRIVLNGRPLPLRMVLDQGYWPGTGMTPPDDHALRRDVELARAMGFNGVRKHQKIEDPRYLYWADTLGLMVWEEMPSAYRFTMLSVERLTREWTEAIRRDYSHPCIIAWVPFNESWGVPNLPDNAGERHWVEALYHLTATLDATRPVVGNDGWESVATDIIGIHDYDADAERLARRYHADEVRPRLFQRERPGGRILVLGGHEKKIDQPIILSEFGGIALRRGDPGIWGYSVCDSPQAFACAYERLIAAVRSVELLSGFCYTQFADTYQEANGLLYADRTPKFPLHEIAAATRGHAPGHPLPDCMDLREREGPRQEGIIEPPPSGHG
>CP012670.1|AUX25328.1|7651761_7652901_-|glycosyl-transferase
MSPRRRPDVICFSHLRFSFVFQRPQHLLTRCARRRRVYFFEEPLRGGGPPRLEETAVEPHGVCVATPHLPAGVAPSRAAAMLRELLDDMMRRHAVSDHVLWYYTPMALAFSRHLKPAAIVYDCMDELSAFAGAPPSIKEREAELLRLADLVFTGGASLYEAKRALHPSVHALPSSVDVAHFAKARGGGREEPDDQASIPRPRLGFFGVLDERMDTALVAAVAALRPAWQIVLVGPVVKIDPASLPRAANIHYLGQKRYEELPMYLGGWDVALMPFARNEATRFISPTKTPEYLAGGKPVVSTSIRDVVQPYGALGLVRIADEPADFVAAVEASLAEDRGRLLSRVDDLLGQSSWDAAWARIERLLDGVLSRRGAGAPGR
>CP012670.1|AUX25327.1|7650636_7651758_-|UDP-galactopyranose-mutase
MFDYLIVGAGFAGCVLAERLARGAGKRILLCDVRKHVGGNAYDHHDTAGVLVHRYGPHIFHTNSREVFDYLSQFTEWRPYQHRVRAWVDGQLLPIPINLDTINALYGLSLNALEVEGFLASRAERRERIRTSEDVILSKVGRELYEKFFRNYTRKQWGLDPSELDASVTARVPVRTNRDDRYFSDTYQAMPLHGFTRMFERMLDHPGIKILLNTDYREIRHVIPHREMIYTGPIDAYFDHRFGKLPYRSLEFKFETKDQEVYQAAPVINYPNEYSYTRVTEFKHLTGQVHPRTTIVYEFPKGDGDPYYPVPRPENAALYRKYEELARETAGVHFAGRLGTYRYYNMDQVVAQALTLYARLTGAPGVRALTEAA
>CP012670.1|AUX25326.1|7648336_7650640_-|dTDP-4-dehydrorhamnose-reductase
MSGAAGEGGAPALELWGGVECTVNRVGDTYHDQVERSGHAQRLDDLERFAELGIRAIRYPVLWERAAQGGPARFAWADARLSRLRELGLRPIVGLVHHGSGPPSTSLVDPGFAAGLARFARAVAERYPWVEHYTPVNEPLTTARFSGMYGHWYPHGRDGRTFVRALLSQCRAVAASMRAIREVNPRARLVQTEDLGKTFSTPRLAYQAEHEDHRRWLSLDLLMGRVDRDHPLYPRLLEWGASPGELEAFVESPCPPDILGINHYITSDRFIDERVERYPAWARGGNERHAYADVEAVRVVAEGIGGHLARLLEVWERYRRPVAITEVHLGGPREEQLRWLLEAFDAAAAARAAGADVRAVTVWAMLGSFDWDCLVVRERGHYEAGVFDVRGSGPRPTALAALVRALARGEPFEHPVLPSPGWWRRPERLLYPAVRVGEPAVRVGEPAVRVGEREAGAGAGAREGAIHGTSAGGGAAGGAGRPPLLIAGASGALGRAFARLCAERGLPHRLLGRGEMDIADPASVERALAHHAPWAVINTAGYTRVDDAERDPRRCERENAVGPAVLAAACRARGVRLVTFSSDLVFDGAQRTPYVETDPARPLSAYGRSKATAERRVTEVLPSALVVRTAAFFGPWDERNFVAAALRALRDGRPFSAAEDLIVTPTYTPDLVNAALDLLIDGESGIWHLTNRDAVTWAELAARSAAQVRVDARRLVRCPSSALPFVAPRPRYSALGSRRGILLPALEDALARYLAGWEGDAARREPA
>CP012670.1|AUX25336.1|7664450_7666658_+|uncharacterized-protein
MKSTTENTDMLKRTRFTGPNRSISLVIFGLSVACGQAPDRLPVMPEDGAGGSAVGGGSATGGGSAVGGGSAVGGGSAVGGGGTSDGGGTSDGGGTSDGGGSATGGGSATGGGSAAGGGSAVGGGTSDGGGTSDGGGTSDGGGSATGGGSAVGGGSAAGGGVSDGGGSATGGGGAGTGGTNEPGTGGTGGTGDGGAPTTSTSTGGSSDDGSTPTDPSLIGDVAFSTPSQTFRDQIQVGMTTAIAGAEIRYTVDGQLPTAASTLYTGEPVTLTATTQIRAQAFVEGAASGAVSTGIYIARTVDATSDIPIMVVDGYGKGKPTDKEVYFDAAVMIWEPVNGVASMASLPTLAMRGGYHVRGQSSRSFPQTPYKLELWDNDDEDLDYEILGMPADSDWALIPPYYDRTLIRNPFTYTLGRDMGLEAPRTRFAEVYLSYEARPIGEADYQGIYWISETIKNNKVRTDLKQLDEDDQELPKISGGYIFKFDQAAAEEPKLLCTGSEPLPSFGGFGGPRPGTGGTCWIDLEVVDPDPLNDQQKTWLTQYIQAFHDSLHQTPIGDYAAHIDVPSFIDYLIINELTLNVDAYVRSAYYFKDRNQKLKAGPLWDYNFALGGVGAQDATPQSTSDTGWRFSGQRNVNNWYQKLTSDPAFMAQVRARYTELRQTLLSQAAIEQRMDSLSAPLARAVVRDFERWPVASIIRSSTGFLGGPTEPTWEGQLQVMRDFLIERLAWMDTNLP
>CP012670.1|AUX25337.1|7667040_7667400_+|hypothetical-protein
MGYAHAVRERDPHHVAIDRELHVEYRDPSDFDRIAFALRALDRLRPKRMTVAVYSAVSTLRVERGRNLQRGEGGSWAIVGIPPHASREHIAYALAELAGVEAVPYAVQSLLAAERASDA
>CP012670.1|AUX25338.1|7667615_7668911_+|uncharacterized-protein
MADGIAPRARGRQSAPVPARIRRQIEHHRALRAVWSVIVSLDRHNAPRAASAMAFDAFLSLIPLAAFAGYVLSRSYQRSEVIVGPILQAVPPEVAALVSEELIRLAQSSAVAPISLTGFLWLTSSGLSTAMGVFDTIYNIRERPWYVRRAIAAACVVASLAVVPVVAGVGVLIGSLSGSIGARIVAFALPAGLVICMVAAFFRISIQRPNIERRRIFPGAVLTVVLWAIVSTLFSLYVATLGRYATFYGSLATVATFLFWLWLQALALLIGGELNARLERERDGVMSIPPPGKWSPLSLADLPEPSPPTRRSPPPARPLLLPSAPPLPSTPLLPSATSPTSTPSPTSTPSPTSATSPTSTPSPTSATSPTSTPSPTSAMPPSITPLPPSATPRPSATLPRRAAAPLGDDGGADEDEERGAPGSAPEQRVAG
>CP012670.1|AUX25339.1|7669098_7671075_+|hypothetical-protein
MHAHYGAGGDGGGSRPPTPLPGDAGLYFLGPLHELVAVGLHRPALEALCAGQRDLEEPPIDRAYLLKILDEEISRQFGQPLRPLVELVLNAADAARAPQPVVEVTVADGRVDVCDTGAGMGLRAILSRLLIPFATDKRPGIDLGRFGVGFFSVLGFGLAHPESFSLQLTTGDGVEGWAIRVVAWSGDDEACAADEPAAEAPGRARGRASVELTSALMCSVRRIAPLLGTRVRVTSAQLEAIAVRAYLRDALHFFPASRALVLLDGAAVNDGRLISGGQIIEERIAHRAGRAPGSARGPAGDARGGPAGDARGGPAGDARGGPAGDARGGPAGDARGDGLLARFHLGGRGLLPSISAATFHAGVKVDACLALAELALIDFPGVVELTEGRDALKVGPEFTEVAAAFHRRLIQLAVARGEGRRARDRLAEVAAQISALMLQSAGWDDVAKDVAAALLGPGRCMVTAERREALLGFLGPSVAERLFVPESFWAEREWQPHLPGERELLEEELDFDPPETLSALARRRADLAGIPLLLARAPNPHTTLVALCRSRPLPGAAGGAAAARGIPGALPLPRIAERRPAGPLPCLGTRRLLLIRDDSAAVRRPAGWSDWYALRAAFDRASGVREADLERDLIVGEPVDDAAGAALGAGIWTSGGEP
>CP012670.1|AUX25340.1|7671071_7673324_+|heat-shock-protein
MSQISYGLFSELLLVRIHGRAEAYLQASGAARSAIVAACRSEATVPDLAQRILSRTIYAQASSRVGPLRELLQNALDASPPGARIDVRSSEDGREISVTDHGRGMTRTELLTDLLVPFRSGKAGEPDAIGEHGIGFFSALEIAPWIEVVTATATDGHRLLVAPLGAGPRYEDFSWTLLPLPRLPPPPAPALAGDGRARGPAPQRRNATGTSVRLSLAQRVSRPALAAEVAAAVGLVDPNVARIYVDGALVNTARGRLRRAAEVPIALSPSGEVLGALELLVGRGEGIEPQLTITQKGLTVATRIDPFPGPELGLHREIARAITAAGFGLVAELPIGVPLNKGRSAVAATAAAAVEAAIVAAFERFILRDALYDRELLRAVDHRLSSVLDRLVAAALLGESITIASAQRVDELDPAARTPTVAAPEQVIRFASGLLDAPLFRSIVVDAGGQRAHAGSAPPARPGQLQWRSVSLTLRELLEAHRAGVLRPLEGAPFQEARRTARWHPGAPHPAREAAFGREAPFARPGELVYLAIDEPLAQAFWRRLVTEGASAQPLAAAAAGAARASGAACPMPRTSREVLLKLAADVPGVRAVVAAMTVLERLDAAISEAADLPTSPIWVHQDLYGPDEMAHTDGSGISVNLASARVRALLTAVLVRDDAIAFSALIDLVLHEKTHVSLASYVPRPTAEHGTSFYRRKDWMRRRLLSALASGAVMDPMRWLAVARRGLGSAALPAPAELSRVLLSGAAAA
>CP012670.1|AUX25341.1|7673764_7674685_+|transposase
MSQPREIAPGATYLVTRRVLRRHLLFRPDAAINQLMLYVLAVSARRYGVEVHAFCMMSTHLHLVVTDVHGVLPRFLQFFHRIVALGTKVLRKWEGPVWDHEATSVVRLLTQAAVVEKIAYVLVNPVAAGLVRHASEWPGARVDVGEIGRGVLHAARPSVYLDPKNPQWIEEAMLPLALPPGIDQGNADGFRHQVAAEVERQEALAHAEAERQGLGFLGADRASEIPPYERVTSFEVLRKCNPTFAVGREQGDARRTAAAAVRAFRASYRVALERSRAGVRSALFPAGTWWMRTFHGASVNDVVLST
>CP012670.1|AUX25342.1|7675113_7677081_-|uncharacterized-protein
MPVNQTKHSNIVSRHVSLRRALHALLLGISAGVLGCGDAEPVARVSQPMVAGSPASAPARGLRAVPDKSRASAWIPEDVSDVRVVIKFHEGTGVQLRGSTLSSPGIGDLSSAASGLDADQLSRDLGSVTALLAKRSMGLKSLFPLPEARLASLKASGEQRSSRQLADLSLYFDAPWSGGPRSALVELVEALNAHPSVEIAYVQPKPEPATAAPEASAGVVALDASTPDFTSMQGYVESDENGMGVAEARLLPGGRGEDVRIIDVERYWVPDHEDLPAPFFYAPAPSPGGADHGTAVAGVLVGQENGFGVTGVAPLAGIGYASWVGIDVGPAIALAAAQLTAGDVVLIEVHSRGPSTTTCSCNSTQCNYVPMEFFQASFDAIQTATANGIIVVEAAGNGSVDLDHPTYGGAFDRAVRDSGALMVGASLSTSRGPNCSSNSGDRVDVHAWGQNVVTTGGDGQLYSGTLGERDRYTATFSGTSSASAIVSGAVAVLQGVARQASGPLTPQQVRDLLVNTGKPQQGQLSRKIGPLPDLATAAPLVAANPGSCGDSACSALESCQSCEADCGVCSTCVPAGCESAAHVTLPYMSDGPVDTCVFFDAASSNLQSWNMTTVELNGVSVLNTWVSPSSYPPACDGGYYLRLVGDFAWSHAEVN
>CP012670.1|AUX25343.1|7677400_7677928_-|hypothetical-protein
MTRVSLRCVVDTNVTMTANGANPGVSAACTVASARALQAVMARGHVFIDDGGRIVAEYRANLSARGQPGPGDAFLKWLLTHEWGGEKVTRVPITPAEDDEEDFVELPRPPGGIVYDRSDRKFLAVAAAHAEHPPILQSFDSKWWGWRAALSKIGVTIEFLCEHDIAAKYEEKMGE
>CP012670.1|AUX25344.1|7677924_7679322_-|hypothetical-protein
MLTKLRLRNFKAWQDSGDIRLAPLTVLFGTNSAGKTSVPQLLLLLKQTAESPDRQRALQLGDGRGLVEVGTYEDTVHGHDVSRPVEFTLRWSLERPLEIRDPLSGAAYAGDELEFGARLVADERHQPWTESFRYELRRGGAGVLDLAVTERSGARQRRRKAEFDLSSSRYALARREGHASALPAPVRFYGFPDEVAAYYQNAAFTADLALELERLLEGVFYVGPFREVPRRHHLWSGEIPEHVGARGERAIEAILAAGDRAFHWEGRQRPMPLAQAVAERLRSMGLIHEFQVKALGEHRKEYEVLVRTGARRPEVKLSDVGFGVSHVLPVIVECFYVPRRSIVIFEQPEMHLHPRVQAELADLFIDAIRAREDGEARDCQLIVESHSEHFLRRLQRRIAEEALSKDDAALYFVHTEDASARIEELDVDDYGNIRNWPDGFFGDEMDDLVARTEAQARRMRKGRSS
>CP012670.1|AUX25345.1|7679781_7682097_-|hypothetical-protein
MRNLLLHFPIVTLLATLAAGCAGDARQPGPGASGTEEPTTPSEPGSTTPSEPGPTTPSEPGSAAPLAPEQQAELAALLEERDASASLSAEDFASKYAVSFSSGLSYAPADAEGLALLQGTSLALGEAELATLSEKGFVIADSHRFPTFVYGYASIYALDLPLYVSADSILHAVHSSYDAILKEVEVVSLVPELGKMLKDMRARLAAGAAGALGDQARVDADLFTAVALALLEGKPIAPVAGASAEEIAALVAGAEAHQGMAEVELFGAQRLMDFSQFEPRGHYVDEMHPELERYFRSMMWLGRVDFRFLETRPDGSQVLQRRQIEGAYALRALAEADTVARYKRIDDTIQAFVGESDYMTLPELDDLLADLELSDAAGLAGVPDARIAEAIVKGGHGTQRISSHIMINGLGQGTLPLSSSFALLGQRYVVDSHVFSNVVYDRVQGGSVKRMMPSPLDAAFAAMGNDQAGQLLAPELGRFSYAPDLHMMRVLVDAHPADFWGKNLYNRWLGALRELSPARALGDGEGLPGVAKTEAWGRRLLNTQLASWAELRHDTLLYAKQSYTSGATCEFPDAYVDPYPAFFARIAELAEHGGEIVGALDLSGAPRNFEERLLSYFSQLHDIARTLGEMAENERAGVPLTQEHLDFINQAVRIQYGCGSPEGADGWYARLFFDPSKSVEQDPTIADVHTQPTDEGGAPVGRVLHVGTGLPRLMVVTADPCGTPRAFVGLASSYFEKITDNFERMTDQEWVGVLQEAMSSDVPWMKDLVSR

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Crispr_ID: CP012670_40

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_40

8147006-8147116

Orphan

Consensus_repeat	Method
CCTCCCCTGCTCTCCGTAACGGACGCTCGGCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_40

>merge|CP012670|40|8147006-8147116|CRISPRCasFinder
CCTCCCCTGCTCTCCGTAACGGACGCTCGGCCCTCTCCATCCAACATCGGCCCGTCCCCACGCGCGCCGTGAACGCTCCCTCCCCTGCTCTCCGTAACGGACGCTCGGCCC

>CP012670|40|37|8147006-8147116|CRISPRCasFinder
CCTCCCCTGCTCTCCGTAACGGACGCTCGGCCC	TCTCCATCCAACATCGGCCCGTCCCCACGCGCGCCGTGAACGCTC
CCTCCCCTGCTCTCCGTAACGGACGCTCGGCCC

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX25708.1\|8136489_8137089_+\|ECF-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
CP012670.1\|AUX25726.1\|8161447_8161861_+\|type-VI-secretion-protein	unknown	unknown	gnl\|CDD\|372665
CP012670.1\|AUX25712.1\|8141402_8141999_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370772
CP012670.1\|AUX25709.1\|8137100_8137553_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
CP012670.1\|AUX25721.1\|8151883_8153344_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274542
CP012670.1\|AUX25720.1\|8150267_8151854_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|370755
CP012670.1\|AUX25707.1\|8135010_8135958_-\|bifunctional-chorismate-mutase/prephenate-dehydratase	unknown	unknown	gnl\|CDD\|223155
CP012670.1\|AUX25718.1\|8148684_8149164_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX25724.1\|8158519_8160526_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224276
CP012670.1\|AUX25711.1\|8138499_8140932_-\|primosome-assembly-protein-PriA	unknown	unknown	gnl\|CDD\|235514
CP012670.1\|AUX25713.1\|8142017_8143496_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|270916
CP012670.1\|AUX25714.1\|8143691_8144669_+\|periplasmic-binding-protein	unknown	unknown	gnl\|CDD\|238564
CP012670.1\|AUX25717.1\|8147225_8148623_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225180
CP012670.1\|AUX25716.1\|8145038_8146844_+\|acyl-CoA-synthetase	unknown	unknown	gnl\|CDD\|341254
CP012670.1\|AUX25715.1\|8144775_8145042_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
CP012670.1\|AUX25722.1\|8153340_8156106_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|274542
CP012670.1\|AUX25723.1\|8156162_8158523_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|370755
CP012670.1\|AUX25719.1\|8149277_8149874_+\|superoxide-dismutase	unknown	unknown	gnl\|CDD\|223678
CP012670.1\|AUX25725.1\|8160587_8161436_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371873
CP012670.1\|AUX25710.1\|8137869_8138463_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX25708.1\|8136489_8137089_+\|ECF-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	6.86365e-20
CP012670.1\|AUX25712.1\|8141402_8141999_+\|hypothetical-protein	gnl\|CDD\|370772	pfam09990, DUF2231, Predicted membrane protein (DUF2231). This domain, found in various hypothetical bacterial proteins, has no known function.	6.56062e-08
CP012670.1\|AUX25709.1\|8137100_8137553_-\|transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	5.00051e-08
CP012670.1\|AUX25721.1\|8151883_8153344_+\|hypothetical-protein	gnl\|CDD\|274542	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein. Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.	3.38978e-103
CP012670.1\|AUX25720.1\|8150267_8151854_+\|uncharacterized-protein	gnl\|CDD\|370755	pfam09937, DUF2169, Uncharacterized protein conserved in bacteria (DUF2169). This domain, found in various hypothetical prokaryotic proteins, has no known function.	3.60055e-42
CP012670.1\|AUX25707.1\|8135010_8135958_-\|bifunctional-chorismate-mutase/prephenate-dehydratase	gnl\|CDD\|223155	COG0077, PheA, Prephenate dehydratase [Amino acid transport and metabolism].	3.96751e-82
CP012670.1\|AUX25724.1\|8158519_8160526_+\|hypothetical-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	1.01459e-38
CP012670.1\|AUX25711.1\|8138499_8140932_-\|primosome-assembly-protein-PriA	gnl\|CDD\|235514	PRK05580, PRK05580, primosome assembly protein PriA; Validated.	0
CP012670.1\|AUX25713.1\|8142017_8143496_-\|uncharacterized-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.57353e-79
CP012670.1\|AUX25714.1\|8143691_8144669_+\|periplasmic-binding-protein	gnl\|CDD\|238564	cd01144, BtuF, Cobalamin binding protein BtuF. These proteins have been shown to function as initial receptors in ABC transport of vitamin B12 (cobalamin) in eubacterial and some archaeal species. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).	2.30655e-43
CP012670.1\|AUX25717.1\|8147225_8148623_+\|MFS-transporter	gnl\|CDD\|225180	COG2271, UhpC, Sugar phosphate permease [Carbohydrate transport and metabolism].	6.47751e-30
CP012670.1\|AUX25716.1\|8145038_8146844_+\|acyl-CoA-synthetase	gnl\|CDD\|341254	cd05931, FAAL, Fatty acyl-AMP ligase (FAAL). FAAL belongs to the class I adenylate forming enzyme family and is homologous to fatty acyl-coenzyme A (CoA) ligases (FACLs). However, FAALs produce only the acyl adenylate and are unable to perform the thioester-forming reaction, while FACLs perform a two-step catalytic reaction; AMP ligation followed by CoA ligation using ATP and CoA as cofactors. FAALs have insertion motifs between the N-terminal and C-terminal subdomains that distinguish them from the FACLs. This insertion motif precludes the binding of CoA, thus preventing CoA ligation. It has been suggested that the acyl adenylates serve as substrates for multifunctional polyketide synthases to permit synthesis of complex lipids such as phthiocerol dimycocerosate, sulfolipids, mycolic acids, and mycobactin.	0
CP012670.1\|AUX25715.1\|8144775_8145042_+\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	3.64234e-11
CP012670.1\|AUX25722.1\|8153340_8156106_+\|uncharacterized-protein	gnl\|CDD\|274542	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein. Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.	2.34774e-100
CP012670.1\|AUX25723.1\|8156162_8158523_+\|uncharacterized-protein	gnl\|CDD\|370755	pfam09937, DUF2169, Uncharacterized protein conserved in bacteria (DUF2169). This domain, found in various hypothetical prokaryotic proteins, has no known function.	8.50223e-101
CP012670.1\|AUX25719.1\|8149277_8149874_+\|superoxide-dismutase	gnl\|CDD\|223678	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism].	5.2835e-77
CP012670.1\|AUX25725.1\|8160587_8161436_+\|hypothetical-protein	gnl\|CDD\|371873	pfam12059, DUF3540, Protein of unknown function (DUF3540). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 212 to 238 amino acids in length. This protein has a conserved SCL sequence motif.	3.39815e-16
CP012670.1\|AUX25726.1\|8161447_8161861_+\|type-VI-secretion-protein	gnl\|CDD\|372665	pfam13665, DUF4150, Domain of unknown function (DUF4150).	1.80387e-35

>CP012670.1|AUX25716.1|8145038_8146844_+|acyl-CoA-synthetase
MTAVWKARTVAQAIEDAATSTKTGYRFIEESSETEPFFTHGGIERASARIGGALQALGLQKGDRVALILPDNADFIFAFLGAIRAGIIPVPIYPPTGLGKLTGYLENTLHIVAKSGAKVLLTSGEIKRMLGTIQAQAPDLQQIVAVEGIRGSREELKPAKVALDDVCFLQFTSGSTSRPKGVVLTHANLAANVRAIVDLGLAVRESVDTGVSWLPLYHDMGLIGFVIAPLYHVNTVTFLPPLLFLKRPVRWLETITRHRGNVSFGPNFAYALCVKRIREQEMAGLDLSTWRVAGCGAEPIRADNLRAFAEKFAPVGFDERAFVCSYGMAESTLAVSFSALGAGLQTDTVDGETLWKEGKAAPAAAESEGASTLVQCGSAFEGHEIAVFASDDAESARPLGDREVGELRLRGPSVMSGYFNEPDLTKAAFAGGWLRTGDLGYLADGKVYICGRSKEVIIVNGRNYYPQDLEWEASRVPGVRKGNVIAFGTMKPHNDRERVVIVFETAASSEQEKQALKGEVRRVVQQAMGLTVDDVVAVGAGVLPKTSSGKLQRSKTRELYENGELLIRSSSRDGDRLDAAKEFAKSQINYFRHAIFRGRGG
>CP012670.1|AUX25715.1|8144775_8145042_+|acyl-carrier-protein
MTWTRETLRAEIIQLLEGHTAGEVKVTESSHLVADLSIDSLGVMEIVADMEDKFDLSIPDDVLREVDTVADVVKAIELKLKNEGRLSG
>CP012670.1|AUX25714.1|8143691_8144669_+|periplasmic-binding-protein
MAFSAGWGPAFAGSFIRIVDDRGRKHEWRTPPQRIVSLVPSDTYSLVRLGAAGCLVGRTRYCVAPAGEVEHVEIVGGTKDVDVDRIAALAPDAVVANQEENSKHDLERLDAAGLRVLVSFPKRVADGVAHLARLARLLGHSATTPPAPEGGAPDGPSTTARDLVATAYRAHAAAEARRGERPPIRVFVPIWMAPLMTVHGDTFISDMLDLAGAQNVFGERTRRYPLAADLGKAPPLPPARVAGRDTRYPRVTLDEVVAHAPDIVLLPDEPHAFTDADAGIFRSLDIPAARRGQILRCDGKDLMWYGARAIEGLNRLRAMIDAARP
>CP012670.1|AUX25713.1|8142017_8143496_-|uncharacterized-protein
MQIERLDVRRGVTLPYPPPDLPAAARGPAREGPDHRRAATRAGRLLPCRFGRYTLFDHIGQGGMADLYLARVCTELGASRLVAIKEVAPKLAHDPRFVEMLVSEAKLAAGLRHASIAQVEDLGREGDSLFIAMEYVEGFDLRELLRRCARQKVKLPIAFSLLIVAEALRALAYAHRRGVVHRDVSPSNVLLSFDGEVKLCDFGIARAHELGGAILDEVLQGKAGYMSPEQARGEPLDERSDLFAAGILLWELLAGRRMYGAGHGAALSKEEARRALLERARRAEIPPLAERGLPDEAALRAIVARALAPAPGDRYEGAAAMLQDLTAYAAAADLSASPLRFGAWLRDRFGTEIVAARRARERAVRALELGPPAVIVPIGGPPAAPFVERVAVLPAEPGAAPLAERAAAPLAGSGAAPLAKRSASSPVAWTAVAPLADRAASPRAPAAAAPRARAPRPLARPRRRALGPLLVRCALALALVALCAARCYLAAR
>CP012670.1|AUX25712.1|8141402_8141999_+|hypothetical-protein
MIGSAVVRGIEEQDWIDRMADPLQRGIRAVLERAPALARVLHGKFLGHPLHPALVTIPIGAWSCTLALDFASIGRGRRLRRGADASAAVGLAGALVAAFAGLADWSTTLGAARRIGFVHGATNLAIAGLYGASLASRAVGLRGLGIALSSTGFGLAGASAWLGGELIYRYGVGVGHDACERRPETQIPVPEAPIADGG
>CP012670.1|AUX25711.1|8138499_8140932_-|primosome-assembly-protein-PriA
MPLLADVAVPVPLAQAFTYEVPAALAAEVRPGARVLCEFHRRKLLGVVLSVSERSAAIDPSRIKPLAALVDARPALPAELLSFLQELAAYYFAPIGEVLRLALPAIEREQVRALKAQAELDGVLDLGRARQVGGRRVAFARATDVVEEPGSLRGQAAAVLALLRAGGEQPVARLEERFGNARSALKKLAGRNLVVLDEREPPRDPFFRLPEQRDVPPELNAAQVEAAARIDAALAALRAPGGAEHHPAAEQAPRSAGPSAFLLFGVTGSGKTEVYLRAIQSCLARGRGALVMVPEIALTPQLVARFRARFGDELAVLHSGLSDADRHAMWASLHGGKVRVAIGARSALFAPVPDLGLILVDEEHDGSFKQEEGVRYHARDMALLRAHRAGAVCVLGSATPSIESVALVRRGKLVELRLPDRAHREASLPEVTLVDLRRFGAGPSGDPLISLPLHRALEQTLAAKEQAILFLNRRGFAPSVVCGSCGTLTTCEACSVALTYHRGRRRDAPRPAVAGPDAPAAPAGPAAAQADERPQGGRLRCHYCDYAGPLPDRCGACGSRTLLLEGLGTERLEATIAESFPEARVARLDRDVAGKDRSQAILARMREGKIDILVGTQMVTKGHDLPNVTLVGVVNADAALGLPDFRAAERGFQLLVQVAGRAGRRDRPGRVLIQTRNPEHPAIAFAAAHDVPGFLEREIRDREEVGYPPATRLALLRIDAVDEGVGRGAAAKLAAHARTCPEGVARRVEVLGPSAAPIARLRGRYRFRVLLRARERGPLRIVLAALTGLIRDGLDRGARVIIDVDPVAML
>CP012670.1|AUX25710.1|8137869_8138463_+|hypothetical-protein
MIRLELSGEHTRLCSTLCGQCPQGPAGCCFSPPELDWTDIGRIVSLGGRGWLLEQLAARNLRPASRGLALRRVRRREERTAPRQSKCVYHGARGCTIPAERRAATCNYFLCEDAFAERLDGRADPASAASRRAHALLRALYDRWDRELAEAVAARPEGPSWDAAFLDWLGAEFERLSRASRAEIDAIDAIDALDPLG
>CP012670.1|AUX25709.1|8137100_8137553_-|transcriptional-regulator
MGDDALPREVGRAIRVLRLLHGLSYAEFAEKARLSATYLRQVERGERDLGLGALGLIAQGLNCDARLLLPGDGRSPVSAVVADRFDRAPEALQEAILFLLIEPEGSPKKQAILALINEDPERSRLRSRPRPDERAARAGAPASSGRRPGR
>CP012670.1|AUX25708.1|8136489_8137089_+|ECF-family-RNA-polymerase-sigma-factor
MQDDREKAFWRLFNKNTIVLVRRWLRLLGVPRRDRRDVAQDVMLAAHLSFSKYDPERGSPERWLNRIAVHIASHYGERSRRRVEVPLPDDLEVAIEQPSAEEQIGSECDRLLALSLLRELDDELSAILVAHDIEGVPMAEFASQCGIPLSTAYKRRLRALAAFQLLAAQRLTAMGEREPGPRPPPGEAPRLVLVSSARP
>CP012670.1|AUX25707.1|8135010_8135958_-|bifunctional-chorismate-mutase/prephenate-dehydratase
MSADAGDPGAPRRAAAVPAPAGGAGEAAPAGDAGEAALPRLRVAYFGRPGTFSHEVASRRFGQGADLTPRRTISAVFDAVAGDAATYGVVPIENAVGGPIYDTVDRLIRREGTGAELVVCEELSLHVTLSLLGRRGAAPRRIYSHFVPLKHCGDWLRAQYPDAQILEAESTAEAVERAAQDGEAWAVGNKGAAAIYQLEILVPKLAVKGENVTRFFVVGRTAEPPPSGGRTLLVFGLEHRPSALVAALSALGRYGINLTRIVSRALPDSPEEYLFLVECEGSTQEPSFKEALALLEQHATGVRSLGSFRVSQKYE
>CP012670.1|AUX25717.1|8147225_8148623_+|MFS-transporter
MPAWLSQLLPILLLLAAIAVVTRRLPTIELGHSAEFRRRRFFNWFPLGLTYAFLYMGRYNLSANASALDAMRLVSKQEFGNIDGWGSAVYGVAFLLNGPLADRWGGRVTIALAAGGSALMNALMGAAVRLAQGGQLGHDATITALTALFAGNMYFQSFGAVSIVKVNAPWFHVRERGMLGGVFGILISLGLYFAYDWSRAIARLLPMPWVFHVPALLLLAFVVLDLLVIRDTPGQAGFQDFDTADASSGDTGERLGPVEVARRMSSQKVIWIIVAIEFCSGFLRNAVMKWYLIFADKTGLEGFVSTHWGVLLCIAGILGGVFAGFISDHVFDSRRGPVASVLYAGLLLGAIVVLFTLSLPVAGWTVVLMSLCVIGVHGMLSGTASMDFGGRKNAGIATGIIDGFVYLGTAAQSFLYAVLLPSGDAASSPARWTPWPLAMLPVAAVGLALSTRLWNARPARRGATG
>CP012670.1|AUX25718.1|8148684_8149164_-|uncharacterized-protein
MRLAEGESVPALHARLIVSNSGGAGVWTLDTRDVRIEVAGAGRSGPAFSSADAPGLPVVRIPPGQQRSVDLYFQLPPELEGAGDIPGFDVLWRVQTDARPIAERTPFERIRVEPAGSATVTYGVGLGLAHPYWHGSLHAGRPVIVYRARPAFRFVAPAR
>CP012670.1|AUX25719.1|8149277_8149874_+|superoxide-dismutase
MYVDVIPLPYAKDALEPVMKQETVEFHYERHHKGYMAKLKSLIAGKPEEGKSLVELMRTSSGAVFNNAAQVWNHDFFWESMKPNGGGAPPAGDVGDLIAGLGGWEKFRADFIAAGVARFGSGYAWLVLDRGKGRIIDTPNAENPLTTGATPLLTCDVWEHAYYLDHRNNRQAFLEVFLDRLVSWDFVARNARAASQAA
>CP012670.1|AUX25720.1|8150267_8151854_+|uncharacterized-protein
MVWRFRGELRVTAIVKATFAFAQNTAMPRVAPQEIFRAEIHHGALPSRSVRFTTDRVPRLLQADVVATGHAHAPHGRPLETLPVRLGLFAGGRTLLDKTLIVRKRGGFVRLPLDYEHAFGGLGFPDNPFGAGYRGAGEPNLLDPFDPARVAGFGPIAQAMPARKRLLGAIPRALLEREIAEIPDELCWDYFQAAPADQRPPFLRGDEWIVMDGLHPSAPRLRMRLPGARGLARVEGLSDAGIDEREVLPLCADMLRIDGDEQRCTVTWRGSFPVPHEGALARIHVLAGVELPGEPIAWPAPGAATGRAGASAPGAHPVTHAGTAPRRGVEAADGDEDDAALASTLAMAPCAAGARHDGTLDLPEGGGRALVESLLPFRSAPEGPSPPRRSAPALPEAPPLRRSGTEALPRDAIERATRQPVVPFSAAAALAPPAAAAPAPPAAAAPAPPAAAAPSPPAAAAPSPPAAAAPAPPDASAPAPPAAAPPAAPRAFAWATPPPEPPPPPGAPERPAKLDVKALLYGPGKKPG
>CP012670.1|AUX25721.1|8151883_8153344_+|hypothetical-protein
MKDASGTLNVHIESARGPWDHVKVRELSGREVISQLFSFDLDVVLDEGRELPADAAPGAEVSLVFEADGEEIRRISGMLGPIRDRLEPLSERATCRLRLVPRASRLTLVETQEIFMDCSVPDIIRSKLERHGFGADDVELRLLESYPEREFVVQHGESDLAFISRLAEHDGISFFFEHEGGRDRLVFTDHPAGFRPAPGAATVPFRPRGEAADIFALEVTTDLIPTSYVVQDYNYRAPQLDVTAYVGLSSGDGGGVVEYGSHVKTPEEARRIAQIRAEERLSRQRVFEGRASRAALSAGRRVTVIDHPRLPAPEELLLVEVEHQARFPAFMDDGAQSPFYRNTFRAIPARIAYRPPRRTPRPRISGVVTGIVQPGPGGKTNGIPQLDAEGRYTVQLHFDTAQPGEQKASRPVRMAQPFGGLGHGMHFPLRPGTEVVVAFANGDPDRPVILGAMFHPLAPSPVTARNANQSRITTASGAMLEISEKR
>CP012670.1|AUX25722.1|8153340_8156106_+|uncharacterized-protein
MSKPLMGTGDRPSPSASTSVGAPSPSGIHFRSEAAPAGAFAVLGLRGEEALSRPYRFEIDLASADPALPLDDLAGAAGVLELGGRAIPGIVAEVEQGGALGDGRYAYRVALVPRLALLGLARQTRMYQRLSVPDLVEAVLAGSGAAIEVERRLERAYPPREHAVQYQESALDFVSRQLEQAGISYFIEPRDGVERLVLCDHPGGFGAGIEATMGEAEAAQVRALRCRRRVAPRALVLIDHNERTPEVPLQAEAEVDARGFGVRVDADDPFATPEEGAALVAVRAEELRCRATVYDGAIGAPLAAGARLALSGHFRADWNREYLVTRAVHRAEAGDGPRYACAFEAVPASVRYRPPRETPRPRLQGAMVARVDARGPEGTAAVDAEGRYRVVMPFDLSGAAEGQASVPMRVATPYGGADEGMHFTLRKGAEVLWTGVGGDPERPVITGVVPNARSRALTSADEGRGRIRMPNGAMVEMGGGFGRTRARAAAGGAEGVPAAGGAGGALPLEQQLGTETSTTTASAKAEDWIRIAVPHGDGKYSYLRYGERATAAAGSFTESARLDPADGFGDSGWTWSSLDDGYDTSSDASDKGTAAHFGWAASDGVYDHTDGNRTVVTQGDYQSVTTGNRTDVVLGNYRLVVPNRTLGVYDADFYSMTFSNDWQGWRKTERSHVSSVNLTYGDSSSFFTGINFGMSLGGSYSVAAGVNGNVFLGLNTGITAGMTCNIAYGPVLEFGSTKKLTTADEQDIKARSKVHLRVRRTDKPTVDAAKPWAAAVAAGAAGAVFGAGGAAAGKHDLDLGGGLTGMTWGIATLGALVGSYLVHKLAHANPLNDAELILEPTQILLRCGGLTGATLKITPTAIELACGPTSLTLDATGVNAKAGLSEMELNGTNASILKFGAGQVQVDQFGVAVQGQQFHWL
>CP012670.1|AUX25723.1|8156162_8158523_+|uncharacterized-protein
MKIVNPTPTTFAAVPWQLRPPQWALCLIAKGTYRLVPGAPAIPADAPEPPLGDVHEGDDPRGALRHASDFAPFKPRADLLLTGKAHAPGRRPVTSLPVSFAVGKTSLALQVTGDRYWADPATGQRTDPQPFVEMPLGYGRAFGGPGFAANPVGRGVFDPGEREVRRRPLPNIEDPRAPVDSPAARPPPAGFGPLAASWALRAGKLGTYDARWLKQRWPFFPEDLDWSYFNAAPPALQAEHLRGDEEIVCHNLHRERRAYRARLPGVRIRCFLDELAGGADRFREVPMHLDTAHVDLEAERLVLVWRGHAPVSAEDHPEVRHVLVASEPLGEGRLAAAHYRERLALALLGERPAAADARAPAAAGPAAAPPGNDNDGAPPLSGVDDAELLAQIRAALEKGRAPAAVVSSLGTPEGDAALEAWLGELGGDPARLDEIQRKTRAQMEEALEAQGHDPAQLDALDREDGAQGRAAEGPAAPWTRERVELCLSIQESMAGADLSGLDLSGLDLGEARLARALLVGADLTGARLAGADLEGATLARAAMAGARLPSARLSDADLSGADLTGADLAGAALGGARLDGAALRGAVLTGAGAAGASFVEADLTDARLDGAALAGARLARAALDRASFRGAALEDASLEGAHGEAVDLRGADLRRLRASERTRLPRARARGARADGARFQQADLTGADLALSSLRRADLGRADLGGADLRGADLAGADLTRARLAGARLERANLHGARLEAADLDGADLRGAELHEAALWQARLEGADLRGAHLSSTLLTSDRGAT
>CP012670.1|AUX25724.1|8158519_8160526_+|hypothetical-protein
MTRAAAAGLARDRDDLLGRLDAGPLDPPMLVGLDLRGVDLSGRDLSGVLFNGVDLSEARLAGAKLDGAVFLAVTLRGADLSGARLAGAALARHTQLTRDAAAAVAPLEADRDLGPEAVEALRAAGYAGYEARATSLEGASLRGADLSRARLEGVDLRGADLSGAALAGAGLAECALDGARLDGAALVEVELDRCTLAGASLVDAEIAAVTLIGVELAALDLSRARLVRGLRAPNQDLRGAALPRDLAGGDLTGANLAGADLSGFDLRGCKLDAADLDGASLASAALDGASLRGASLRGARLPGAALRGADLEGAALERASLGGARLDGAVLEGADLAGADLSRCDLSRARLGGARLRGALLADAALRGAGLAGADLAEASLQGASLEAADLRGASLPGARLPGADLTGADLSRAGLAGADLSGARLAGVRFRGADLTRAVLRGATLDRAQLAGATLAGADLSRASLERTSLRGLDLGGVRLAGARLARSSLVEAKLAAMDLSGAELRDCDLSRAELRGAKLDGADLTQASLAGADLAGASLGSARLGVANLTGACLEGARLAGADLSRACLDGAVLARAELHGARLDEAVLRKADLRGARLRDASLVHADLSHADLSGADLSGADCRGADLHRAVTARARWDGARREGARETDPERARAEDWRPPTSL
>CP012670.1|AUX25725.1|8160587_8161436_+|hypothetical-protein
MPTAAQPALPVDPPPAEAARPAARRDDPPPAEAARPAARRDEPPPPASPAARRDDPPPPASPAARRDEPRPEERPLRIVARAGASASIVERDGHEVVAVHDPAGRLLFEYDAATGRGSLVAAGGLSLAAPGGDIELVAGGAIRCWAAGEVAIASRSGASLGARAGERGATVRVAPGRVTVAGEALAAVAARGDVRIDEARYEGRALTAVLERAHATVGKLESIAGRVIARAEDLFQEVRALHQLRAGRVRALVEDVIELRGREVEVKAREDVSLDGERINLG
>CP012670.1|AUX25726.1|8161447_8161861_+|type-VI-secretion-protein
MFPVTTTQAGICQALPDTCKTPAPPGPPVPLPYPNVAMCNQATPSTCALKVLVAGKPVLTKQSEIPMSTGDEAGSAGGVVSGKIKGEAMYRSFSMKVKAEGNPVVFHTCTVAQNGKSPNMPLGVQVAPSQAKVLVSG

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Crispr_ID: CP012670_41

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_41

8683416-8683691

Orphan

Consensus_repeat	Method
CGACCGGTCCGACCGCCCTCG	CRT

6 spacers

The CRISPR arrays of CP012670_41

>merge|CP012670|41|8683416-8683691|CRT
GGGGCGCTCCGACCGCCCTCGAGACCTCGGAAACGAGCTGACACGACCGGTCCGACCGCCCTCGCGACCCCGGAAACGAGCTGACACGACCGGTCCGACCGCCCTCGCGACCCCGGAAACGAGCTGGAACGACCGGTCCGACCGCCCTCGCGACCCCGGAAACGAGCTGACACGACCGGTCCGACCGCCCCGTCGATACCGGAATGCTCCCGGCGGCCGGTCCGACCGCCCTCGAGACCCGGAAACGAGCTGACACGACCGGTCCGACCGCCTTCG

>CP012670|41|10|8683416-8683691|CRT
GGGGCGCTCCGACCGCCCTCG	AGACCTCGGAAACGAGCTGACA
CGACCGGTCCGACCGCCCTCG	CGACCCCGGAAACGAGCTGACA
CGACCGGTCCGACCGCCCTCG	CGACCCCGGAAACGAGCTGGAA
CGACCGGTCCGACCGCCCTCG	CGACCCCGGAAACGAGCTGACA
CGACCGGTCCGACCGCCCCGT	CGATACCGGAATGCTCCCGG
CGGCCGGTCCGACCGCCCTCG	AGACCCGGAAACGAGCTGACA
CGACCGGTCCGACCGCCTTCG

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX26134.1\|8699048_8699348_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|379454
CP012670.1\|AUX26133.1\|8698272_8699100_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|276809
CP012670.1\|AUX26124.1\|8674494_8674686_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX26123.1\|8672729_8674034_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX26120.1\|8669111_8670638_-\|sodium:proton-antiporter	unknown	unknown	gnl\|CDD\|223104
CP012670.1\|AUX26119.1\|8668402_8669110_-\|TrkA-family-potassium-uptake-protein	unknown	unknown	gnl\|CDD\|223643
CP012670.1\|AUX26132.1\|8695718_8698139_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226703
CP012670.1\|AUX26137.1\|8701316_8701757_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX26121.1\|8670634_8670736_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX26125.1\|8674980_8675496_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376622
CP012670.1\|AUX26131.1\|8689866_8693169_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379469
CP012670.1\|AUX26128.1\|8683893_8685135_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|379114
CP012670.1\|AUX26129.1\|8685229_8686753_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|181288
CP012670.1\|AUX26135.1\|8699344_8699815_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|274805
CP012670.1\|AUX26130.1\|8687152_8689870_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX26136.1\|8699943_8701005_+\|excinuclease-ABC-subunit-C	unknown	unknown	gnl\|CDD\|198394
CP012670.1\|AUX26127.1\|8681889_8682804_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|237865
CP012670.1\|AUX26122.1\|8670798_8672637_-\|citrate-transporter	unknown	unknown	gnl\|CDD\|238535
CP012670.1\|AUX26126.1\|8676310_8681641_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237057
CP012670.1\|AUX26118.1\|8667572_8668352_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|377434

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX26133.1\|8698272_8699100_+\|uncharacterized-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	0.00133584
CP012670.1\|AUX26120.1\|8669111_8670638_-\|sodium:proton-antiporter	gnl\|CDD\|223104	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism].	2.70513e-55
CP012670.1\|AUX26119.1\|8668402_8669110_-\|TrkA-family-potassium-uptake-protein	gnl\|CDD\|223643	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].	2.35323e-34
CP012670.1\|AUX26132.1\|8695718_8698139_+\|hypothetical-protein	gnl\|CDD\|226703	COG4252, COG4252, Predicted transmembrane sensor domain [Signal transduction mechanisms].	0.00804411
CP012670.1\|AUX26127.1\|8681889_8682804_-\|uncharacterized-protein	gnl\|CDD\|237865	PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional.	2.20432e-05
CP012670.1\|AUX26125.1\|8674980_8675496_+\|hypothetical-protein	gnl\|CDD\|376622	pfam01814, Hemerythrin, Hemerythrin HHE cation binding domain. Iteration of the HHE family found it to be related to Hemerythrin. It also demonstrated that what has been described as a single domain in fact consists of two cation binding domains. Members of this family occur all across nature and are involved in a variety of processes. For instance, in Nereis diversicolor hemerythrin binds Cadmium so as to protect the organism from toxicity. However Hemerythrin is classically described as Oxygen-binding through two attached Fe2+ ions. And the bacterial NorA is a regulator of response to NO, which suggests yet another set-up for its metal ligands. In Staphylococcus aureus the iron-sulfur cluster repair protein ScdA has been noted to be important when the organism switches to living in environments with low oxygen concentrations; perhaps this protein acts as an oxygen store or scavenger.	1.55935e-05
CP012670.1\|AUX26126.1\|8676310_8681641_-\|hypothetical-protein	gnl\|CDD\|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	8.87008e-08
CP012670.1\|AUX26118.1\|8667572_8668352_-\|uncharacterized-protein	gnl\|CDD\|377434	pfam04982, HPP, HPP family. These proteins are integral membrane proteins with four transmembrane spanning helices. The most conserved region of the alignment is a motif HPP. The function of these proteins is uncertain but they may be transporters.	4.04034e-20
CP012670.1\|AUX26129.1\|8685229_8686753_-\|amidohydrolase	gnl\|CDD\|181288	PRK08204, PRK08204, hypothetical protein; Provisional.	1.66111e-148
CP012670.1\|AUX26135.1\|8699344_8699815_+\|uncharacterized-protein	gnl\|CDD\|274805	TIGR03830, transcriptional_regulator_XRE_family, putative zinc finger/helix-turn-helix protein, YgiT family. This model describes a family of predicted regulatory proteins with a conserved zinc finger/HTH architecture. The amino-terminal region contains a novel domain, featuring two CXXC motifs and occuring in a number of small bacterial proteins as well as in the present family. The carboxyl-terminal region consists of a helix-turn-helix domain, modeled by pfam01381. The predicted function is DNA binding and transcriptional regulation.	1.50729e-21
CP012670.1\|AUX26136.1\|8699943_8701005_+\|excinuclease-ABC-subunit-C	gnl\|CDD\|198394	cd10447, GIY-YIG_unchar_2, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria and archaea. The family includes a group of uncharacterized hypothetical proteins, mainly found in bacteria and a few found in archaea, with a GIY-YIG domain that shows statistically significant similarity to the N-terminal catalytic domains of GIY-YIG family of intron-encoded homing endonuclease I-TevI and catalytic GIY-YIG domain of nucleotide excision repair endonuclease UvrC.	4.36408e-27
CP012670.1\|AUX26134.1\|8699048_8699348_+\|uncharacterized-protein	gnl\|CDD\|379454	pfam14076, DUF4258, Domain of unknown function (DUF4258). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 95 and 124 amino acids in length.	0.00013488
CP012670.1\|AUX26122.1\|8670798_8672637_-\|citrate-transporter	gnl\|CDD\|238535	cd01115, SLC13_permease, Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is related to renal and intestinal Na+/sulfate cotransporters and a few putative bacterial permeases. The SLC13-type proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium and various anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease is composed of 8-13 transmembrane helices.	3.02769e-53
CP012670.1\|AUX26131.1\|8689866_8693169_-\|hypothetical-protein	gnl\|CDD\|379469	pfam14102, Caps_synth_CapC, Capsule biosynthesis CapC. This family of proteins play a role in capsule biosynthesis. They are essential for gamma-polyglutamic acid (PGA) production.	3.10432e-26
CP012670.1\|AUX26128.1\|8683893_8685135_+\|uncharacterized-protein	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	3.3717e-16

>CP012670.1|AUX26127.1|8681889_8682804_-|uncharacterized-protein
MRPRYPVHPPEILSTPADPAQPPAPAPGRYPHAPAPASARQPPPPPPPPPPPPPPPEGPFRADPLRPGDPYELSHGHPLFSVPSGARASSLRLLGAAVVAWDPAVSEVGVDTGYSPAPGMLRAPDVAVGNVPAALPGWAPGTPALAIEYAEVGRDEARLSQKIRDLLGAGTRWIWIVRLGAPRHVEVHAPREPPRRVFPGDWLRAPGVLQNPVPVEALYDRAAAQQALLASLLQREGYASLASLRQQGLREGRCEGLRRAVRDVCEVLGVALPSEEEASLLELDGPALAALLARLKRERRWPLP
>CP012670.1|AUX26126.1|8676310_8681641_-|hypothetical-protein
MDLDAFAASAARRALLGAALALALGVTPGASGVREAAAAEPLAWVAPDSARVVLWHHAPRQGAPGAAATPAAPAAAATPAAPAAAATPAAPAATATPAAPAAADPTGPVALAAEELLLVPVEPGDRLELRGEVAGIGLGSGVGDTPDVITWMPLPPRREGARDFAVPAWSGARFAVVRAAVPRGAQRAEVAVRVAARERAPLAWYRLDEDVAAWLGGRAPAPATAPREAGALLRWVDAARAALSPPAAARLDPAAAAWLTARYLEESLLLRPLVEPYFVEQPVEVRGGRERPDLPAAPRATPWRWLGAGARLGLRAPDADVLRIALRPRAHGATRVVVRAGGAVVRELAFRTGPRLADAARWREPRWIRVPLPVDAREATVEVVEGELAVAAGGFRQRAGVAELLAPERDRAALLDRAAQPGRDGERARPHVDAPRRLAAADRALAPAAAAAALDLAARPGVPPALRALVLAESVRWAPSPDAAFARAARAHAAAQAGPAASAAPLQRAALSRLAAAHAGPGAPGAPWSAPAAPPPPGPAGAGAHPDDVAVVSALGAALSPPHDGRRPLGAPLAEQYALGHGDLGSAAPVARIAWAREAPWDTLDVPEGTTSWSAIAPPRDTPPPVDGGGAPRAAADALCDVDAASGLRWTLLDTPRAELTVDAPPGAHARVLLRSASSEVVPESSVLIDGTEVAVHGGAGLTSVVAVAPGARVFARRAGAAPVLARIPRRGRAPCASLREITRWAWVDGAVTFPLPDPERATVARVVLAPPDAAGAPRPAGAAAGAPRPAGAAAGAPRPAGAEGRVLRVRAGAGTYEAWVRAGATGAIEIPVPAGAGELRVETAAPALVRASVRLHRAAPPAPRVVTPARPPPGSAAVDGSLERIRSATRALRAAPPQARGALHAQRAAALEALGFPALAALDRDAALDRDAEEEPRGAGQLPGAAAAGAPPVTVFALPPGSPPVVPLGLSARVPPLPLPGDRAPLAAARDARSAGDPRRGVALLEGPAGDSSGADALLLGLLAERSGEARLAADAFTRVGLAHRSAAALTRAANLATDVAAAAAPPDRRLTLRALALAELAVQAAAREAAGAVAAGAPSPPAQLPPAALARLAPVTSWDVPPRADAAAGSAALELRQRADHELPLRVRVRRALVDAPEPSLLLTDGARAEFRFDRAEPGAIVLDGRCRTLDHEEAPCAFSVALDGAKVACSAAPAPTSGPAPSSGPAPMVDRCVVQVPRGSHRVEARPTTDRSVLGWIRATADGAAQPFSGRVLSTWHDIDPGRPLELAFAGPTVVRIRARAAYECAAAPRARAGAGPAGEGDPGCRPEIAAATPEGHLRYAVAPLGGDGAAGAVLEEGAIALDTTEDRAARRLGVTRAPFFWLGDEVEARVAVLPEGPHVLRVASPAGRALLRVELAVAAGAPRPRVPPPAPPPPPPPAGAPADDALRPAPAVGEDPDTGPLSVGGYARLVDSELTEEDLRLPLRFLELGLDAHRELIERRAWIAAAGFGRLRDGPASFGAEARFDLSSSGWVPGLALSGRVVHQPGAGGAVGGRASASAFWSIPIDELTLSPWAGFTWLAVDGSLRGVQGADKDLFTPYAAEHRTQAALGARLRHRPLVDALVTAGTSLRLSPVPETLDRVDVTLDLDLLPGRGLFPWIQLGWLASYRPENETRDEAFLRDAFTAGVTFWSWLGRGHRVSLGAEGTFLFDIPSPAETSPRLSALLFARYDFTAGRGLRDFPPRATPFRDRQEEGSGLIERQRPAVEPSWEDP
>CP012670.1|AUX26125.1|8674980_8675496_+|hypothetical-protein
MKATSLLERQHRKVESLFKQLEGGRSEPAPILAELANELAAHMAIEQERFYPAVRQIDEDLILEGYEEHAIAELALKRLISTSPEDASFKARVTTLKELIQHHVEEEEEELFPKVEEAMDEDRLQELGEQMRAEFEQRLSEGYEELLPAGYKKTSADRASHAKRADAASPG
>CP012670.1|AUX26124.1|8674494_8674686_+|hypothetical-protein
MMVLGSVAFGCGGSKPQPEGPAEQAGEAVDDAARDAKDEAEDAAESTGDAAEDAGDEIEDKTD
>CP012670.1|AUX26123.1|8672729_8674034_-|hypothetical-protein
MIHDFAGALSAIFTDERARLLHVIVPAHVHGHTLALLRALGEAGPSPRPVWILADPTYGPSRGWAARARSLARELGDPPAAEAADSPPDAPAPGPPAEPLCAFASALAAQLAARAPGQGVVVVLSPQHIDDPQAHARDLLALVQRPELAPVRWVLVDAVHASVGDLLARLGEGTSRVVWPEAEGQALVEIERLLTDLSARGQHLPADLEMRVAPGSPLRAPELLPARRLLHEADKCFQGGRHADAAHLQKQAEELLLGRGLGEEAIHVAMQRARSLIAAGVVEEGHRVFVAALKEAERRGLLAIVPEAYASLGSLHSKQRRFLDASEAYARAGDLADRRGSREFAADMHRCAGHAALNAELPDAAATAWRRAFELLGAMAPTVGALEKPQQIVILGLALADVFEAHGNLPAARGLRGHAEAIETRNPRRSETWS
>CP012670.1|AUX26122.1|8670798_8672637_-|citrate-transporter
MTSEAFIALAILGLTIVLFVSDRLRLDVVAMLSLLALAITGVATASEALAGFSNPAVIMIAGLFVIGAALTDTGVADWLGQRLERLAGGGEVQVIVAVMGATALLSAFMSSTGTVAILLPVVGTLAMRRGIAPARLFMPVAFAAHLGSNLTLISTPPNLLVSDALRQAGRAPFRFFSFTVPGLIVLALGVAYLAWIGRRALPGAADRADARAPRPLSLDDLSTEYGLGGALRALRVPPGARLAGLTLGQANLRAAFGVTVIGIARPGPRGLEAQRVVPTMAFAAGDALRVLGSDAAIAALADSFGLEALGERPTFSLPPEESLAEVVLPRRSSLAGQSLREARFRDRYRANVLSIRRGDGSIPVFHSTPELRDIKLRAGDTLLVKGRLKHLKNLRDERRDLVLVAEPDARGEALVDRGRALLAVGITLVMLVCMAFGWLPNVVAVLLAAVLLVLVRCVRPVDVYRSVNWESVVLIAGMVPLAAALERTGAMGAAVSALEGLLAGARPTAVLGLLVLFTSAIGMVLSNTATAVLMAPLAVRLAGALGLAPEPLLLGVAFASSAAFATPIASPVNILVMGPGGYRFKDFTRVGLPLQLLVLATTVIVVPLVFRF
>CP012670.1|AUX26121.1|8670634_8670736_-|uncharacterized-protein
MSALKDSSQRATYPPPVPIALVLKLPPPARGDA
>CP012670.1|AUX26120.1|8669111_8670638_-|sodium:proton-antiporter
MRERLESLLLVLAVGSTVAIGAKRVGVPYNVALVLVGLLLVVLDVLPNTPMDPEVILIAFLPVLVFEGALFADADSLRAASRPILALAVPGVLISLLGTAAVATLVLDLPFATALLLGALLAITDTVSVLLAFRSVRVPHRLAAIMEGESLFNDGTALVLVVLASRVVASGTFDPITTLRELSMAMIGGAVLGGAFGAVGSALLRRTPDHLTAILASTVIVFATALVTERLHASPVIAVVVVGVVIGRVARRFLEPSRVLALQGFWETSGFALNVLLFLLVGMQIQAEMLVREAASIGLALIALHAGRAVAVYGCFGVLRAVTREVVPLRWQHVMLVGNIKGALSMAAVLSLPRDMAYRDRLITIVFGVTFVTLVAQALPFARLLKLLQVATPAADLTLDAAKATLIAARRGQAELDELLASGLVSRKEHAERRAAFQRQVIGAEAALQSPQGEQAKDHLTDIALLSAQKAAVLDAARRGLIAAETADAHANELDHEMVKLHTHEGGG
>CP012670.1|AUX26119.1|8668402_8669110_-|TrkA-family-potassium-uptake-protein
MRVLIAGAGRAGLSVAVHLAATGHDVTIVDRDESIANSAFERSGLVSLVGDATDAGLLKEAEVGRADVVVAMLRRDADNLAVALLAQSAGAKRVMVRMRDPDYRSVYVRAGVHRILSEIDVFIGAMATAIEHPAVRHAMVLGTGEAVAFELDVPADSAVAGRTVSVIASSAGFPASCVFAALYRPDGGVEGPRGSSIVEGGATVLLVAARDELAEVVAFFLRRDPGAGEARARPR
>CP012670.1|AUX26118.1|8667572_8668352_-|uncharacterized-protein
MTERRMGANRAPEEPWGARRGYGPISPRHPLGGEMTDVVRGLFARLRLPWLLQRYSQVPVLAVFSCVNGFVSIGLMAVLAAVTRSPFVFPSLGPTAFLFFYTPTAASAAPRNTIFGHCIGVAAGYLSLLVTGLTHAGPATAVGVTLPRAVAAALSLGLTAGLMVLARAPHPPAGATTLIVSLGILARPPALLVLLGGVVLLTIQAIVINRLAGIDYPLWAPRRAPPEPQPQPRAGAISSSPHRGSRPRAPSDPPPARPA
>CP012670.1|AUX26128.1|8683893_8685135_+|uncharacterized-protein
MRLLDLSIRNIGPFDEACLEFLSAPDDPVPVAIITGENGTGKTILLDAIRGLFGEHYGRLERAIWRNGTPFQMKANLVIDERQEVLLSNQKQYTEGPFDFQPRNAALYRLPIEVGGGKACPNWVVDFWRSALPADAYTITQLTRQEPKDFLRNSLKGIQRNAAVTELICAFDYLRGSDDPRDRQDGEALYDAVRRIVELSVLDGELSHVDRRAFMPMIRQSGQLVPLSNLSSGNAYLIQHMIGLLGKMYAVHALRGTDASELCKTPGLLLIDEAENHLHPRWQKRFLRDVISLFPNIQIIATTHSPFIVGSVPGARVFVCRYDRARKTCVVDDASDLYANKPVEEILLSPAFDGTQPFGEEITRLLEERKAAFEAGDTPRREEIERQLKEKNLEHFSYMTIEERLQALRGERA
>CP012670.1|AUX26129.1|8685229_8686753_-|amidohydrolase
MCKRLCGDSSTHDGDPAKAGSSRRQFLAVGASALGAAATFSTPVSAQETTETEAMPLETGAAHRQYLLKGGAVLSMDPNVGDFAQGDVLVQGKHIIAVGPNLYAPDATIINAAGTIAMPGFVDTHHHQYQTALRSFLSDGLLADDGLPHGDRNYLDYIHSTITPVFRPQDAFVAVFASALSQLDAGVTTVVDTSQVGHSPDHTDAVIEALQESGRRTVFVYSPGVGPDNIFPNDLQRLQLQYFSSTDQLVTLAMGGELFDPAFRDYWAIGRQNGLLIVTHLVGHLGQQTLVEQLDSEGLLGPDLEFIHASGISAASWQAIADAGVRVSIAAPIEMAMRHGMPPIQAALDLGIQPSLSTDVECTMTADFFTQMRGVFTLQRALINERALAGEPNLPELLTCRDVIRFATVEGARVAGLSHKIGSLTPGKEADILLLRADAINVAPLNNVPGAVVTLMDRSNVDTVIVGGKIRKWRGRLVGAPVNLLRAALEASRDYLLTTAGVSSALF
>CP012670.1|AUX26130.1|8687152_8689870_-|uncharacterized-protein
MTAPARRREPSSRGRIAPPRGPRPALVARPAQGSFSAERAGQRRAVNPRWLIAMALLGLTAFALALLPGAPPLGGALPAEDEILAYHIDPHRDLVIKIPVEIDAVEVTTWASVEADACDSARRYPYGFVAAFVDERGEEVARHAIDLESRVSCDPDRPLGEGEYAARLERGGGAVTDPRSTLLITHDVLPQGGQVRLRAKPAVGSDGAPVALTILSRLEGRYQRSEASRALFEQSLDAEERRQMGRRVSALGFADLPEPARRELLRGWARRLEAAGREGLDYAVSRLLLRRFRRPFPRAEGRGASEFTIGERHAAALNFRGPVSLDIEGPPGRTVRVADGASAPVSVALGPRGRATVRLSREDVRTVVIDGVGPDFGVRFGVPEAQAAQQIGEIVHPAMPAPEGAPDEAAEAAGAAPAEDPGAAPAATTAPVRLQTPPDVRIVRYLALDPGAPVIARMAPGQELLGLLIRAEIEASTGADQGDATVVARWGPGPSDRAELTVTLPRSRFEWWNSGFDASEPRLAILRPPPGVERIEITGHARTRIRLRTIEPGVHETLYRLPYRVALGEDEVWRYAPFDVSTWTDVRAINLDELERGERFSDLREQVRIERAGRGARSNADRPERILTPEHAPVRRRLLMPAWQSAGEPSPGDAWTPLLVAKEVRVEAEGARAGRLSVIYRAAREALGREVAVRVDGEVAAREPIVTRAGTLRVPAEAGARKVEVEGLGEAGIAYTDAPPANGGPIVRRRDVFELTRARPMTYRFRQGAGETLHLVLFVVTPGENAAYRLRYRIEGARPASREAAFFRRVTIPEGVLAGRGGDLARATLWEAATDARGTDGVARGVIRLGDDLAPGERVVRLWLLGPQAGDAGETAEAVWIGAVLVGQKAPGRDDGPRLWVEDDP
>CP012670.1|AUX26131.1|8689866_8693169_-|hypothetical-protein
MLDNLPLFPPNGLDRSLHTAVLIGLVFGTFFTETLGWTYAGLVVPGYLATVFFAAPVTAVFIIAESIATYLFVALIGRWITRTGAWSTAFGRERFYLFIVGAVIVRLFVEGLVVPEVAARHDFAHSRELYSIGLVLVPLIANAFWNSGLLRAAPRLAVITALTALVLGVLLRTTNLSVSRFQVLNESLSLEFLELPKAHIILVIGALLGARNNVRYGWDYNGILVPGLLAVAWYEPTKLLTTTVEALFVYYLSRWITSVRPFSRMLLVGPRRMIFVYVVGFIVKMAIGFAMVRYAPGLQMIDYFGFGYLLPSLLAVKMWNKERVGVVIMPTLQVSFTAFLAGNAVGYGLVALGWGSAPPVPAADARPAPRVESAALSLVLADTAPRPGPRPRAAAIAADIEARRIAYRVARDVLQAGRPADEHLRAAERARLSVAQEGEGERPWFVVSARLEDPEDAPSAPRAAFRKRAGRGPEGGPEWLVLAAPAEVGSALPPVALRVAEILDAAGVVLLSRHGAIRRHDEAFAGAMIEAMEGPAVLIVEPGSGAAPELSVVGSPAGLPVTAIGEGLGAGAALTFRPAADAPGQLADMPRLRVPVHVAEAVGARMLGAPEIVRWSGTVEEELSRRMVPLTEVLPGRFRPPSIEELRLFDSVVMPRLVAAATRRGGAAGAATPTAWERAILGRLGFREVRIGGSEGAPAAWGIAEPGPAEGDPERRGNPAWFVLAHAPPPPPSPPERRSAGPAASIGGILPASPSPEAERAPLAGAMLVEVPAPRWQIGAFGAGLAIADALSAQSLLLAGAVPTAEPSGAADVRRAEGLRSFFQRVHEVWVGDGGHALSVQAIEADRSHERDAVISFGYEVVRPGHVPTFAGPLLTTLDDLELRVGLFDGAREQVPFSGATDVAMGYARRFAEGRFGIVYLGSAIRRFFELRRFAAPGFGESRLEARLSRLGVTPAPLDVAERALALATCATGAGASGDDVCPTRGVPAGCDLAAEMEVFRRYTAERNPYYLKAYFAARPAAPGARCHVEIARDVVTGRPWVIAARPGEAELLPMDGALVAVPGAAVPDAARLRRAVTIGTSALRVEVAAPGAASQEVSP
>CP012670.1|AUX26132.1|8695718_8698139_+|hypothetical-protein
MGSQSDATRLGWLRPDVLSIVAGALLAAVTPFERFDYLARGLTASALADDAPSTQVLLVTAAPDALRDGLCARSLPGLLERGRARGALLVPPADAFCGDGAAAAVPVARMPPELLRLSAGEVVGFASPAGDARAADLGALGVTAAPWVLKKAPQSVPAVSLSALAEGQVPATTLEGRVAVIGVGSGGVAPQEVATSALPPAKGVAAVLGGLLDGGRRASAPTWVASAFVLLAGGFVWLARRRYGSVVATTAVFLASFALALGQSLLAARAEASLLPLPSTLFGLAVAFAGVMITRGLGVQRAVGRAAELLQRAALFRMQGVHALPDEEFWPRMARLAQQAHPADLVLIAELPPGSFHLRFWNDRANGESLVAERRHDVRRPPYSSEQGVPAIRVARRFLTRQDMPAVVVPLIAFGEIEGYVFFCGAVAESTFAREPERAENVGRELALLLRRKRLARTAEQGGGLPAAGEAKGSHEPADHLVEGARVALDDLQVFGSMLRSAPVGLLYADAFGDVRFVAPEFARWLRAREVAVPPESASAALPPGSLTLGDVLGATATDSAAVSLSSVMASDGGIELSVAAPEPAVLSLRPLRRESDGSSWIAGYVAALIPVKPAASPSANVRPLAARDATDPLCAFQLADLVTDAVASAARATGRAVRLEPIRGATHALGHRGELAQALEGFLTDVASRGLPGHGPVVSVREASQGVQLSILDVGFGLGLPESALQRVLTAPGAAPAGLEPLGRLILAVEDSHGHAELRTNDGWGITLTVTLLRAHPRVATAVQESGKPAAPQQNVIAIGRASPK
>CP012670.1|AUX26133.1|8698272_8699100_+|uncharacterized-protein
MRMLTHLEEARDLARICAQLNVHRNELAQRFALPWVLAAHPAAALRLQQIAPDFCDFAGLWLLDEQAADAELGTLEQAIDAPAVPQPPSSHLGGGPGTSELLERASVAISLGRLDEAADWLAQYDLDNPGARSNVAPRIRLGGQLHWKRGRPIEVLACFERALERCEALGDLHGKAVLLTDIARSALQRVLPPGRGPGGPRAARPAQRGCRRAWSGRAGRGPLRALVTWTSALPHEVARRPSESTRRRPILIFPQFALAWRPCSPSRSRLRPQKR
>CP012670.1|AUX26134.1|8699048_8699348_+|uncharacterized-protein
MAAVLAEPLAPPAAKALILDTLANGEVTFSNHALDEMSKEDPDITEEEVFAVLRGGIVEPAEFRSGSWRYRVRAMGVYVVIAFRSEIRVKVVTAWRVRR
>CP012670.1|AUX26135.1|8699344_8699815_+|uncharacterized-protein
MTKDVKCTECGDRMISTREDRPYSKLPGVLLLGVEVLRCPKCGESEVVIPKPNQLGDLLARHLIEKRDRLVGPEIRFLRTHLGLPGAELARRMGVSPETISRWENGKDTMGPVADRLLRLLVAGDMPREALAKIGDDPRPLSLAVRASRAGWKEAA
>CP012670.1|AUX26136.1|8699943_8701005_+|excinuclease-ABC-subunit-C
MAEPYTIRIYVPAGDPEGVKIVDRFNWTGVGVAFPRILWPEIAARSEFTRAGVYILTGTEEGSADDLPTIYVGQGDGVGERIKAHYAEKVFWEWGYAFVSSNSSLNRAHITWLEYALLERARNAGRCHLNNANAPREPGLTEAEKADTEGFLGELLRILPLLGVRVFEKPVPIASSSTPRAAAVSVSQIDERDTIIVPAQEDGFRDVFLGENCWYAIRISGGMLTRIKHIAAYQTAPVSAITHYAPVRAIEPYGDEGKYRLIFSEPAKPLGPIPFANAPTGCMQGPPRAGPSCSSMRAGRSSTGGRSTSTRDGGTSSAYLESTRLRSSRPPNPGAAARGGRDSARTARRLSAS
>CP012670.1|AUX26137.1|8701316_8701757_+|uncharacterized-protein
MLSDRAGFLVAFLGGPLAALLVGAFNTRALRRLGQDAWLLALAFAWSILVVAVAAHATATTPSELAATRHVVLFGHELSAAVLRRLVQASGLLVFLAFFLRHRRFHRAAALADAKPARPWIVGLSCLVAGGGLQIVLTMAMIAAFR

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Crispr_ID: CP012670_44

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_44

9186842-9190447

Orphan

Consensus_repeat	Method
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CRISPRCasFinder
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CRT
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	PILER-CR
CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC	PILER-CR

49 spacers

The CRISPR arrays of CP012670_44

>merge|CP012670|44|9186842-9190447|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGAAATCAGGCGACAGCGTACAGGGTACGGGAAGGGCTAGCGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGGAGCAGATCCGCGCCGCCCTCCCGGGTGCCTGCGTGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGAAGAAGGCCGCCGGGAAGGTGGCGAGAAAGGGGACACCGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGGCACCCTTCGGATGACGTGGTCCGCGACCACGCCGCCGGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGGCTCAAGGGCGGCGAGACCATCCAGGTCCCCTACTTCAAGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGGTGGCGACGGGTCTACGAGCTGGCCGTGGGCCTACGCGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGTGGCTCGACCCGTGCGCCAATGAGCGCCAGCGGGGTATGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGGCACCGGCCGATGTGGGCGGTAGCCTCACGCTCATCGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGCAAGGCTCGCCATTCCCTCTTCTCGGGCTCCAACCCCAGAAACGCTTCAATGGGGCCGCCGCCCTTCAGCGGCGGAGAGCTCACGGGCGTCTTCCTCGACGCGCCCTATGGCGCCGCGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGCCCTCTTCGCTCACCAGCACGATCGCCTCGAGCATCCGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGAGCGGACGCTCGTCGAGCAGGCGCGCCGGCTGACCAGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGCAGTGATGGCGGACGAACGGCACCGCCGGAGACAGCGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGGAGGACCCCATGTAGCACCGGCGGAGCCAGAGGCAGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGCTCGCGACGAACGTCGCCCCGTCGACGGTGCTCAGGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGGAGATGGGAGCTTGCCACGTGGGGGGTTGAGTCCGTTGCTTCAATGGGGCGGCCGCCTTTCAGCGGCGGAGAGGCGCGGCCGAGCTCGCGGCCGAGGAAGGGATCCACGTGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGGCGCTCTGGCGGCGTACAACCTCGGCTGGGCCTGTGGAGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGGAGTCATTGGGAAGGATCAATTTTTGAGCTTATGGTTGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGCAGATGGCGAAGCTGGGCGCAAGCGCGACGGCGTTGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGAATCACATCGCAGAGCTTGCGGCGGCAGCAGCCGACCGGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGCAGCTACTCACGTCGAGCCGAAGAACTGCCCGACGTGGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGCGCGCAGGGTCTGGACGAAGAGGCCGCGGAGCCCGTGGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGATGGCAAGTGGCCGGAGACGGCTATGCGAAGCTGCCGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGATCTCCTCCTCGTCCGCCGACGCGACGTTCGCCGTGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGCGGATCTGGGCCCCGCACGAGCCGGGCGCGCGCGGAATGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGGAGAGGACGCATGAACTTCGCACTCTACGTGAGCTCGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGACGCACGCGCACGTTGATTGAATCGCCCTGGTATCGTAAGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGTGACGGATGTGCTCGCGGGCACAGCGCAGATCACATCCGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGAACGTCGCGGGATTCACTGCGGGCAGCCTCCCCTTGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGGCGGGCGTGCCGCTGGTGCCGTAGCGGCCGACGCGCGGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGTACAACGCGGGTGATCCGGTGCTCAGCGTGGAGATGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGCTCGTCGTCGCTAGTCGTCCACGGGCGCGGCCGACGGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGTGGTAACCTTGGGTCAGGTCAGGTACTGGCCGGAAAGGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGGCACGCGGTGGCGATGGCGGTCGCGCTCCCGAAGCGGCCGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGGCTCGGAGGGCAGACACGATGACCGCCCGCCGCAGGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGCCACCGCGCTGCTGTCCCACGCCACACGCGCCCCCGGCTCGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGCTCGTGGGCGCGTTCGATCGGCGCTGCGTGGTACCGGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGGCACTGCACGAGCGGATCGGGGCGGGTGGGGTCAGCAAGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGGCCGCATCGCCGCCGTACACGGCGGTGGAGGACCTGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGATTGTTTACGAGATCAGGACAGCCGTAGCTTCGGAGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGTCCGGGTGCCACTGACAGCCGGCGGGTTCGCGTTCCTGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGCACCCCCCCACCCCGCCATATCCCCCCCTCCCTGTGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGGGCGGCGTTCGGGATCAACGAGCCCCCGATCGGCGGCGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGGGCCAGTCGCCAACTCTGCGAGGCATTCGACCTCCCCGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGGACACGGCCGGGCGCCGGATGAACGCCTGAAAGGACTGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGGATGACGACGGTGCGGATCACGGGCTGGACGGCGATCGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGTGGGCCGATACGTGGTACGCCTCCGTGGAGGCGGCGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGGCGGAGAGAGTTCTCCAAGTACGACGCGCCTGATGACTAGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG

>CP012670|44|40|9186842-9190447|CRISPRCasFinder
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	AAATCAGGCGACAGCGTACAGGGTACGGGAAGGGCTAGC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GAGCAGATCCGCGCCGCCCTCCCGGGTGCCTGCGT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	AAGAAGGCCGCCGGGAAGGTGGCGAGAAAGGGGACACC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCACCCTTCGGATGACGTGGTCCGCGACCACGCCGCCG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCTCAAGGGCGGCGAGACCATCCAGGTCCCCTACTTCAA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GTGGCGACGGGTCTACGAGCTGGCCGTGGGCCTACGC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TGGCTCGACCCGTGCGCCAATGAGCGCCAGCGGGGTAT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCACCGGCCGATGTGGGCGGTAGCCTCACGCTCATC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGCAAG	GCTCGCCATTCCCTCTTCTCGGGCTCCAACCCCAGAAAC
GCTTCAATGGGGCCGCCGCCCTTCAGCGGCGGAGAG	CTCACGGGCGTCTTCCTCGACGCGCCCTATGGCGCCGC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CCCTCTTCGCTCACCAGCACGATCGCCTCGAGCATCC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	AGCGGACGCTCGTCGAGCAGGCGCGCCGGCTGACCA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CAGTGATGGCGGACGAACGGCACCGCCGGAGACAGC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GAGGACCCCATGTAGCACCGGCGGAGCCAGAGGCA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CTCGCGACGAACGTCGCCCCGTCGACGGTGCTCAG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GAGATGGGAGCTTGCCACGTGGGGGGTTGAGTCCGTT
GCTTCAATGGGGCGGCCGCCTTTCAGCGGCGGAGAG	GCGCGGCCGAGCTCGCGGCCGAGGAAGGGATCCACGT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCGCTCTGGCGGCGTACAACCTCGGCTGGGCCTGTGGA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GAGTCATTGGGAAGGATCAATTTTTGAGCTTATGGTT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CAGATGGCGAAGCTGGGCGCAAGCGCGACGGCGTT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	AATCACATCGCAGAGCTTGCGGCGGCAGCAGCCGACCG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CAGCTACTCACGTCGAGCCGAAGAACTGCCCGACGTG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CGCGCAGGGTCTGGACGAAGAGGCCGCGGAGCCCGTG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	ATGGCAAGTGGCCGGAGACGGCTATGCGAAGCTGCC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	ATCTCCTCCTCGTCCGCCGACGCGACGTTCGCCGT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CGGATCTGGGCCCCGCACGAGCCGGGCGCGCGCGGAAT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GAGAGGACGCATGAACTTCGCACTCTACGTGAGCTC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	ACGCACGCGCACGTTGATTGAATCGCCCTGGTATCGTAA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TGACGGATGTGCTCGCGGGCACAGCGCAGATCACATCC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	AACGTCGCGGGATTCACTGCGGGCAGCCTCCCCTT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCGGGCGTGCCGCTGGTGCCGTAGCGGCCGACGCGCG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TACAACGCGGGTGATCCGGTGCTCAGCGTGGAGAT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CTCGTCGTCGCTAGTCGTCCACGGGCGCGGCCGACG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TGGTAACCTTGGGTCAGGTCAGGTACTGGCCGGAAAG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCACGCGGTGGCGATGGCGGTCGCGCTCCCGAAGCGGCC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCTCGGAGGGCAGACACGATGACCGCCCGCCGCAG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CCACCGCGCTGCTGTCCCACGCCACACGCGCCCCCGGCTC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CTCGTGGGCGCGTTCGATCGGCGCTGCGTGGTACCG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCACTGCACGAGCGGATCGGGGCGGGTGGGGTCAGCAA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCCGCATCGCCGCCGTACACGGCGGTGGAGGACCT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	ATTGTTTACGAGATCAGGACAGCCGTAGCTTCGGA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TCCGGGTGCCACTGACAGCCGGCGGGTTCGCGTTCCT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CACCCCCCCACCCCGCCATATCCCCCCCTCCCTGT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GGCGGCGTTCGGGATCAACGAGCCCCCGATCGGCGGC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GGCCAGTCGCCAACTCTGCGAGGCATTCGACCTCCCC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GACACGGCCGGGCGCCGGATGAACGCCTGAAAGGACT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GATGACGACGGTGCGGATCACGGGCTGGACGGCGATC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TGGGCCGATACGTGGTACGCCTCCGTGGAGGCGGC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCGGAGAGAGTTCTCCAAGTACGACGCGCCTGATGACTA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG

>CP012670|44|11|9186842-9190447|CRT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	AAATCAGGCGACAGCGTACAGGGTACGGGAAGGGCTAGC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GAGCAGATCCGCGCCGCCCTCCCGGGTGCCTGCGT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	AAGAAGGCCGCCGGGAAGGTGGCGAGAAAGGGGACACC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCACCCTTCGGATGACGTGGTCCGCGACCACGCCGCCG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCTCAAGGGCGGCGAGACCATCCAGGTCCCCTACTTCAA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GTGGCGACGGGTCTACGAGCTGGCCGTGGGCCTACGC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TGGCTCGACCCGTGCGCCAATGAGCGCCAGCGGGGTAT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCACCGGCCGATGTGGGCGGTAGCCTCACGCTCATC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGCAAG	GCTCGCCATTCCCTCTTCTCGGGCTCCAACCCCAGAAAC
GCTTCAATGGGGCCGCCGCCCTTCAGCGGCGGAGAG	CTCACGGGCGTCTTCCTCGACGCGCCCTATGGCGCCGC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CCCTCTTCGCTCACCAGCACGATCGCCTCGAGCATCC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	AGCGGACGCTCGTCGAGCAGGCGCGCCGGCTGACCA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CAGTGATGGCGGACGAACGGCACCGCCGGAGACAGC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GAGGACCCCATGTAGCACCGGCGGAGCCAGAGGCA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CTCGCGACGAACGTCGCCCCGTCGACGGTGCTCAG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GAGATGGGAGCTTGCCACGTGGGGGGTTGAGTCCGTT
GCTTCAATGGGGCGGCCGCCTTTCAGCGGCGGAGAG	GCGCGGCCGAGCTCGCGGCCGAGGAAGGGATCCACGT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCGCTCTGGCGGCGTACAACCTCGGCTGGGCCTGTGGA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GAGTCATTGGGAAGGATCAATTTTTGAGCTTATGGTT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CAGATGGCGAAGCTGGGCGCAAGCGCGACGGCGTT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	AATCACATCGCAGAGCTTGCGGCGGCAGCAGCCGACCG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CAGCTACTCACGTCGAGCCGAAGAACTGCCCGACGTG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CGCGCAGGGTCTGGACGAAGAGGCCGCGGAGCCCGTG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	ATGGCAAGTGGCCGGAGACGGCTATGCGAAGCTGCC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	ATCTCCTCCTCGTCCGCCGACGCGACGTTCGCCGT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CGGATCTGGGCCCCGCACGAGCCGGGCGCGCGCGGAAT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GAGAGGACGCATGAACTTCGCACTCTACGTGAGCTC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	ACGCACGCGCACGTTGATTGAATCGCCCTGGTATCGTAA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TGACGGATGTGCTCGCGGGCACAGCGCAGATCACATCC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	AACGTCGCGGGATTCACTGCGGGCAGCCTCCCCTT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCGGGCGTGCCGCTGGTGCCGTAGCGGCCGACGCGCG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TACAACGCGGGTGATCCGGTGCTCAGCGTGGAGAT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CTCGTCGTCGCTAGTCGTCCACGGGCGCGGCCGACG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TGGTAACCTTGGGTCAGGTCAGGTACTGGCCGGAAAG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCACGCGGTGGCGATGGCGGTCGCGCTCCCGAAGCGGCC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCTCGGAGGGCAGACACGATGACCGCCCGCCGCAG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CCACCGCGCTGCTGTCCCACGCCACACGCGCCCCCGGCTC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CTCGTGGGCGCGTTCGATCGGCGCTGCGTGGTACCG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCACTGCACGAGCGGATCGGGGCGGGTGGGGTCAGCAA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCCGCATCGCCGCCGTACACGGCGGTGGAGGACCT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	ATTGTTTACGAGATCAGGACAGCCGTAGCTTCGGA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TCCGGGTGCCACTGACAGCCGGCGGGTTCGCGTTCCT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CACCCCCCCACCCCGCCATATCCCCCCCTCCCTGT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GGCGGCGTTCGGGATCAACGAGCCCCCGATCGGCGGC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GGCCAGTCGCCAACTCTGCGAGGCATTCGACCTCCCC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GACACGGCCGGGCGCCGGATGAACGCCTGAAAGGACT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GATGACGACGGTGCGGATCACGGGCTGGACGGCGATC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TGGGCCGATACGTGGTACGCCTCCGTGGAGGCGGC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCGGAGAGAGTTCTCCAAGTACGACGCGCCTGATGACTA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG

>CP012670|44|10|9186917-9187393|PILER-CR
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GAGCAGATCCGCGCCGCCCTCCCGGGTGCCTGCGT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	AAGAAGGCCGCCGGGAAGGTGGCGAGAAAGGGGACACC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCACCCTTCGGATGACGTGGTCCGCGACCACGCCGCCG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCTCAAGGGCGGCGAGACCATCCAGGTCCCCTACTTCAA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GTGGCGACGGGTCTACGAGCTGGCCGTGGGCCTACGC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TGGCTCGACCCGTGCGCCAATGAGCGCCAGCGGGGTAT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGGCACCGGCCGATGTGGGCGGTAGCCTCACGCTCATCGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGCAAGGCTCGCCATTCCCTCTTCTCGGGCTCCAACCCCAGAAACGCTTCAATGGGGCCGCCGCCCTTCAGCGGCGGAGAG	CTCACGGGCGTCTTCCTCGACGCGCCCTATGGCGCCGC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CCCTCTTCGCTCACCAGCACGATCGCCTCGAGCATCC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	AGCGGACGCTCGTCGAGCAGGCGCGCCGGCTGACCA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CAGTGATGGCGGACGAACGGCACCGCCGGAGACAGC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GAGGACCCCATGTAGCACCGGCGGAGCCAGAGGCA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CTCGCGACGAACGTCGCCCCGTCGACGGTGCTCAG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GAGATGGGAGCTTGCCACGTGGGGGGTTGAGTCCGTT
GCTTCAATGGGGCGGCCGCCTTTCAGCGGCGGAGAG	GCGCGGCCGAGCTCGCGGCCGAGGAAGGGATCCACGT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCGCTCTGGCGGCGTACAACCTCGGCTGGGCCTGTGGA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GAGTCATTGGGAAGGATCAATTTTTGAGCTTATGGTT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CAGATGGCGAAGCTGGGCGCAAGCGCGACGGCGTT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	AATCACATCGCAGAGCTTGCGGCGGCAGCAGCCGACCG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CAGCTACTCACGTCGAGCCGAAGAACTGCCCGACGTG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CGCGCAGGGTCTGGACGAAGAGGCCGCGGAGCCCGTG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	ATGGCAAGTGGCCGGAGACGGCTATGCGAAGCTGCC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	ATCTCCTCCTCGTCCGCCGACGCGACGTTCGCCGT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CGGATCTGGGCCCCGCACGAGCCGGGCGCGCGCGGAAT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GAGAGGACGCATGAACTTCGCACTCTACGTGAGCTC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	ACGCACGCGCACGTTGATTGAATCGCCCTGGTATCGTAA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TGACGGATGTGCTCGCGGGCACAGCGCAGATCACATCC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	AACGTCGCGGGATTCACTGCGGGCAGCCTCCCCTT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCGGGCGTGCCGCTGGTGCCGTAGCGGCCGACGCGCG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TACAACGCGGGTGATCCGGTGCTCAGCGTGGAGAT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CTCGTCGTCGCTAGTCGTCCACGGGCGCGGCCGACG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TGGTAACCTTGGGTCAGGTCAGGTACTGGCCGGAAAG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCACGCGGTGGCGATGGCGGTCGCGCTCCCGAAGCGGCC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCTCGGAGGGCAGACACGATGACCGCCCGCCGCAG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CCACCGCGCTGCTGTCCCACGCCACACGCGCCCCCGGCTC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CTCGTGGGCGCGTTCGATCGGCGCTGCGTGGTACCG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCACTGCACGAGCGGATCGGGGCGGGTGGGGTCAGCAA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCCGCATCGCCGCCGTACACGGCGGTGGAGGACCT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	ATTGTTTACGAGATCAGGACAGCCGTAGCTTCGGA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TCCGGGTGCCACTGACAGCCGGCGGGTTCGCGTTCCT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CACCCCCCCACCCCGCCATATCCCCCCCTCCCTGT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GGCGGCGTTCGGGATCAACGAGCCCCCGATCGGCGGC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GGCCAGTCGCCAACTCTGCGAGGCATTCGACCTCCCC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GACACGGCCGGGCGCCGGATGAACGCCTGAAAGGACT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GATGACGACGGTGCGGATCACGGGCTGGACGGCGATC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TGGGCCGATACGTGGTACGCCTCCGTGGAGGCGGC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCGGAGAGAGTTCTCCAAGTACGACGCGCCTGATGACTA


>CP012670|44|11|9187505-9190447|PILER-CR
	GAGCAGATCCGCGCCGCCCTCCCGGGTGCCTGCGT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	AAGAAGGCCGCCGGGAAGGTGGCGAGAAAGGGGACACC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCACCCTTCGGATGACGTGGTCCGCGACCACGCCGCCG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCTCAAGGGCGGCGAGACCATCCAGGTCCCCTACTTCAA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GTGGCGACGGGTCTACGAGCTGGCCGTGGGCCTACGC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TGGCTCGACCCGTGCGCCAATGAGCGCCAGCGGGGTAT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAGGCACCGGCCGATGTGGGCGGTAGCCTCACGCTCATCGCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGCAAGGCTCGCCATTCCCTCTTCTCGGGCTCCAACCCCAGAAACGCTTCAATGGGGCCGCCGCCCTTCAGCGGCGGAGAG	CTCACGGGCGTCTTCCTCGACGCGCCCTATGGCGCCGC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CCCTCTTCGCTCACCAGCACGATCGCCTCGAGCATCC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	AGCGGACGCTCGTCGAGCAGGCGCGCCGGCTGACCA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CAGTGATGGCGGACGAACGGCACCGCCGGAGACAGC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GAGGACCCCATGTAGCACCGGCGGAGCCAGAGGCA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CTCGCGACGAACGTCGCCCCGTCGACGGTGCTCAG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GAGATGGGAGCTTGCCACGTGGGGGGTTGAGTCCGTT
GCTTCAATGGGGCGGCCGCCTTTCAGCGGCGGAGAG	GCGCGGCCGAGCTCGCGGCCGAGGAAGGGATCCACGT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCGCTCTGGCGGCGTACAACCTCGGCTGGGCCTGTGGA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GAGTCATTGGGAAGGATCAATTTTTGAGCTTATGGTT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CAGATGGCGAAGCTGGGCGCAAGCGCGACGGCGTT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	AATCACATCGCAGAGCTTGCGGCGGCAGCAGCCGACCG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CAGCTACTCACGTCGAGCCGAAGAACTGCCCGACGTG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CGCGCAGGGTCTGGACGAAGAGGCCGCGGAGCCCGTG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	ATGGCAAGTGGCCGGAGACGGCTATGCGAAGCTGCC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	ATCTCCTCCTCGTCCGCCGACGCGACGTTCGCCGT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CGGATCTGGGCCCCGCACGAGCCGGGCGCGCGCGGAAT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GAGAGGACGCATGAACTTCGCACTCTACGTGAGCTC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	ACGCACGCGCACGTTGATTGAATCGCCCTGGTATCGTAA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TGACGGATGTGCTCGCGGGCACAGCGCAGATCACATCC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	AACGTCGCGGGATTCACTGCGGGCAGCCTCCCCTT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCGGGCGTGCCGCTGGTGCCGTAGCGGCCGACGCGCG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TACAACGCGGGTGATCCGGTGCTCAGCGTGGAGAT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CTCGTCGTCGCTAGTCGTCCACGGGCGCGGCCGACG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TGGTAACCTTGGGTCAGGTCAGGTACTGGCCGGAAAG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCACGCGGTGGCGATGGCGGTCGCGCTCCCGAAGCGGCC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCTCGGAGGGCAGACACGATGACCGCCCGCCGCAG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CCACCGCGCTGCTGTCCCACGCCACACGCGCCCCCGGCTC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CTCGTGGGCGCGTTCGATCGGCGCTGCGTGGTACCG
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCACTGCACGAGCGGATCGGGGCGGGTGGGGTCAGCAA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCCGCATCGCCGCCGTACACGGCGGTGGAGGACCT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	ATTGTTTACGAGATCAGGACAGCCGTAGCTTCGGA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TCCGGGTGCCACTGACAGCCGGCGGGTTCGCGTTCCT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	CACCCCCCCACCCCGCCATATCCCCCCCTCCCTGT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GGCGGCGTTCGGGATCAACGAGCCCCCGATCGGCGGC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GGCCAGTCGCCAACTCTGCGAGGCATTCGACCTCCCC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GACACGGCCGGGCGCCGGATGAACGCCTGAAAGGACT
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GATGACGACGGTGCGGATCACGGGCTGGACGGCGATC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	TGGGCCGATACGTGGTACGCCTCCGTGGAGGCGGC
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG	GCGGAGAGAGTTCTCCAAGTACGACGCGCCTGATGACTA
GCTTCAATGGGGCCGCCGCCTTTCAGCGGCGGAGAG

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX26471.1\|9185517_9186696_+\|anti-anti-sigma-factor	unknown	unknown	gnl\|CDD\|132912
CP012670.1\|AUX26478.1\|9201830_9203279_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
CP012670.1\|AUX26479.1\|9203387_9203987_+\|ECF-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
CP012670.1\|AUX26465.1\|9171679_9178192_-\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|236848
CP012670.1\|AUX26462.1\|9170679_9170946_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX26474.1\|9193916_9198050_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|237057
CP012670.1\|AUX26477.1\|9200619_9201513_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|365907
CP012670.1\|AUX26476.1\|9199493_9200573_+\|prephenate-dehydratase	unknown	unknown	gnl\|CDD\|223155
CP012670.1\|AUX26466.1\|9178411_9178852_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224647
CP012670.1\|AUX26468.1\|9180325_9183304_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224331
CP012670.1\|AUX26480.1\|9203983_9205030_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|188247
CP012670.1\|AUX26481.1\|9205407_9206406_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX26463.1\|9170984_9171245_-\|membrane-protein	unknown	unknown	unknown
CP012670.1\|AUX26473.1\|9192881_9193166_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX26464.1\|9171247_9171649_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX26475.1\|9198046_9199261_+\|UDP-N-acetylenolpyruvoylglucosamine-reductase	unknown	unknown	gnl\|CDD\|237552
CP012670.1\|AUX26469.1\|9183690_9184530_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|235124
CP012670.1\|AUX26467.1\|9178995_9180114_+\|12-oxophytodienoate-reductase	unknown	unknown	gnl\|CDD\|239243
CP012670.1\|AUX26470.1\|9184480_9185164_-\|ATPase	unknown	unknown	gnl\|CDD\|222854
CP012670.1\|AUX26472.1\|9191724_9192681_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235562

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX26471.1\|9185517_9186696_+\|anti-anti-sigma-factor	gnl\|CDD\|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	4.8017e-43
CP012670.1\|AUX26478.1\|9201830_9203279_+\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	1.03364e-09
CP012670.1\|AUX26479.1\|9203387_9203987_+\|ECF-family-RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	5.57016e-27
CP012670.1\|AUX26465.1\|9171679_9178192_-\|diguanylate-cyclase	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	1.7367e-61
CP012670.1\|AUX26474.1\|9193916_9198050_+\|uncharacterized-protein	gnl\|CDD\|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	4.92457e-10
CP012670.1\|AUX26477.1\|9200619_9201513_+\|uncharacterized-protein	gnl\|CDD\|365907	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5).	1.25265e-06
CP012670.1\|AUX26476.1\|9199493_9200573_+\|prephenate-dehydratase	gnl\|CDD\|223155	COG0077, PheA, Prephenate dehydratase [Amino acid transport and metabolism].	2.43871e-101
CP012670.1\|AUX26466.1\|9178411_9178852_-\|hypothetical-protein	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	5.23164e-32
CP012670.1\|AUX26468.1\|9180325_9183304_+\|hypothetical-protein	gnl\|CDD\|224331	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion].	0.00012664
CP012670.1\|AUX26475.1\|9198046_9199261_+\|UDP-N-acetylenolpyruvoylglucosamine-reductase	gnl\|CDD\|237552	PRK13903, murB, UDP-N-acetylmuramate dehydrogenase.	1.80868e-133
CP012670.1\|AUX26480.1\|9203983_9205030_+\|uncharacterized-protein	gnl\|CDD\|188247	TIGR02795, Uncharacterized_protein_in_oprL_3'region, tol-pal system protein YbgF. Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction.	8.87077e-07
CP012670.1\|AUX26469.1\|9183690_9184530_-\|uncharacterized-protein	gnl\|CDD\|235124	PRK03427, PRK03427, cell division protein ZipA; Provisional.	1.30471e-08
CP012670.1\|AUX26467.1\|9178995_9180114_+\|12-oxophytodienoate-reductase	gnl\|CDD\|239243	cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include 12-oxophytodienoate reductase, pentaerythritol tetranitrate reductase, morphinone reductase, and related enzymes.	0
CP012670.1\|AUX26470.1\|9184480_9185164_-\|ATPase	gnl\|CDD\|222854	PHA02518, PHA02518, ParA-like protein; Provisional.	3.84176e-41
CP012670.1\|AUX26472.1\|9191724_9192681_+\|hypothetical-protein	gnl\|CDD\|235562	PRK05687, fliH, flagellar assembly protein FliH.	3.10482e-05

>CP012670.1|AUX26471.1|9185517_9186696_+|anti-anti-sigma-factor
MKAVRGAPFAVIECAGNLDDLVVAGWNAGAEHIFGYTSAEAVGRPLTDTILSGPDGEAWRRALGQEGAAPLRCTHTSKDGRTVVCEWHHAPVLDDAGGPTRLLCFGHDVTELVTAVEALRQRDVVLRAILGTLETAVTRMDRDGYTVFHEGKLLDALGMKQGQFIGMNVFDPPPAPMDMEPLRRGVRGESMRARVEVFGTIWETWVIPLRDARGEPDGAVSVVLDATEAKVREDELRSRIELIERQQEVIRSLSAPIIEVWDGVLTLPMVGVVDSQRAAEVMDSLLAAIVDKQARFAILDLTGVELVDTKTASYLIELVRAIRLLGAEGVITGIRPNVAQTMVALGLDLSGIATRGNLRAGLRLCIQRLSAGGAANGAPAGGAPAPAGGGRR
>CP012670.1|AUX26470.1|9184480_9185164_-|ATPase
MIIALTGQKGGIGKSTTAVSLAVAALAKGRRVLLVDADPQGTVRTWGDVASEAGHETPTVMAMGASMHKPGQLPEVAAAYDLTVIDCPPRHGEIARSALMIADVAIYPCGPTAADAWALTAALEVFREAATLRSALKGCILITRKQGRTALGKSARGVLETSGLPVLSTELGYRIAYQEALACGQGVTNYAPRDAAAKEITHLLEELEKLHHGEKAGRGLAQKAAVA
>CP012670.1|AUX26469.1|9183690_9184530_-|uncharacterized-protein
MAKKQVAVSLRKPPSPEKVDAFVAGGTDGAAEHDTKASRPAGSRSKAAADRRAQDARPPAQAKQGQAPAAQQAAEAQQAPAAQQAAEAQQAPAAQQAAEAQQAPEAQQAPEAQQASVAPQAAEAQQAPEAQQGAELAAAPQPASAAAPPQALATAPEPPAVPPVLVGADGRSRRAVTVYLPDPLADRLVLHCIEHDRDVSNLVGEAVEVHLDRRLGPATVSAAPAADSASAPREPAPAGPSYRAEPFRAADPRPKGRVGRVFQVGRVLMTLWRQRPRAS
>CP012670.1|AUX26468.1|9180325_9183304_+|hypothetical-protein
MSAAPGEVQRIGAGELRAFIPDAAELRKGALLYDGGQLLNLARHENKLFCEARGSGAAPYKVTLIYSDAPAPGFKGRCTCPARTFSTAFCKHAAALLVAWARAPESFVVSDAAPAGAPGATPARRSVKKGGASAEALMKAGVEQVGTLVRELAVAGVAAIGKDRIEQLAQLAAALRENRLRRLSARTLDLAALLGPHAAGAPRAAGAPRAAGAPRAADARGGALPAVAYANLLTDLLLTARKLEKHLAGEPLDGRHVEELVGKTWKASDREPVEGLTLVEYAFSTRATSDGFVIRESRFLDLESGRHLSEKQILPAFLAKRTEPKRSFAGEVLAGARGSTYPGYPPLRVDFTDLGDKRPLDAGALEAILARALPDASAALAALQEHRKDVFAPDLAPVAVRVDTLFARGARLAAVDDKGQAVHLPDDAALEERLAGALRDARLRALLGDVGIDAALPTLWPLAAVVEGPLGLELRAISDQGADQGAAARRGPLQGTAWNAAAREAGASPAAIALGEVREELAEALVTGLTGLSARGIDPLAERLRDLRLEKQAALLQGLLQRPDPADRLDDFIKLYQVLEVALVRLAGATSVDRAGAERAPAYESVLVARPAEALTPEEVTARRATGAMSRYVAAVHHARYYASLPAGELAERLFPIWADGTAAPTLARRFAPLGAEAIRAAERALTVKAGRMARLTAVRVLQAVAQHGGPPRAEAAAMLGRVAEHAKDAGLRALARDALDALEAAGPGAAAVRERRAARMARVQELARALGAAPTQEERGEALKALAELGDLAALPALRRAFHADAARGVREEAAYALAQLGDVEMVETFVRMLAGRGEDEREAKIAAYALGYLGDVRGLNELLSAWAAGYKPGVVADALRAFGAAALAPLVDLLEARPELAKRATALDALKRMEDTAVSAFLLERIATRRGEPDFAARAPLYLKLADAHPHGKREVAAAIAAALDGAGGKDAQAARKAAERALGLVKRGG
>CP012670.1|AUX26467.1|9178995_9180114_+|12-oxophytodienoate-reductase
MTTSSDLLFSSFSFGPLSLPNRVVMAPLTRCRAGEGNVPTELIARYYEQRASAGLIVSEASQVSQQGTGYVGTPGIYTDAQVEGWRLVTDAVHRAGGRIFLQLWHVGRSSHVSFQPDRQAPVSSSAVRIRAGHAHTPEGPQPYSTPRALEIHEIPGVVGQFEAGARRAKAAGFDGVELHSANGYLIDQFLRDGVNQRTDRYGGSVQNRARLLLEIVEAVTGVFGADRVGARLSPRSEYNDMSDSDPAELFSHVATELSERRLAYLHVVEPLEGRALDAPERVTPLLRARFRGAFIVNGGYTREAAEEALRTGAADLVSFGAPFIANPDLPERLARRAPLNAPDVSTFYAGGPRGYIDYPRLDEAQPAAAGAG
>CP012670.1|AUX26466.1|9178411_9178852_-|hypothetical-protein
MKRSCQHLCDKFQAAMDVLARPWNGLIIATLEEGALRFGELRERLDAISDRMLSSRLKDLEALGLVVRRVLPGPPVRVEYELTDVGRGFREVAKAITRWGEMLADGAPRALTGASSDDRARGRARAQVKRGRARPRGATKGRGEGA
>CP012670.1|AUX26465.1|9171679_9178192_-|diguanylate-cyclase
MEQRTSGKVASPRSRTASPKGGAAKGASGTNGKNLSAGKGTKAGRADSAARTLQAISLQPRSQPVPAEDLPRPRRRAAQDDVMRRPARPGLDLGQMLAALVALKKGDFSVRLPIDLEGLDGKVADTFNDVVELNEKFALELERLSRAVGKEGKIGQRATMGEVSGAWAGEVASVNALIGDLVQPTREMARVIGAVAKGDLSQTMALKVDGRPLDGEFLQTATTVNTMVDQLGSFASEVTRVAREVGTEGKLGGQASVPGVAGTWKDLTDSVNSMAGNLTAQVRNIAAVTTAVANGDLTQKITVDVKGEILELKNTFNTMVDQLRSFASEVTRVAREVGTEGKLGGQAEVRGVAGTWKDLTDSVNSMASNLTAQVRNIAAVTTAVANGDLTQKITVDVRGEILELKDTFNTMVDQLRSFASEVTRVAREVGTEGKLGGQAEVPGVAGTWKDLTDSVNSMASNLTAQVRNIAAVTTAVARGDLTQKITVDVRGEILELKDTFNTMVDQLRSFASEVTRVAREVGTEGKLGGQAEVKGVAGTWKDLTDSVNSMASNLTVQLRDVSKVATAIANGDLTQKITVDVRGEILQIKDVINTTVDQLSSFAAEVTRVARDVGTEGKLGGQAEVKGVAGTWKDLTDSVNSMASNLTAQVRNIAAVTTAVANGDLTQKITVDVRGEILELKNTFNTMVDQLRSFAAQVTRVAREVGTEGKLGGQAEVTGVAGTWKDLTDSVNSMASNLTAQVRNIAAVTTAVANGDLSKKITVDVRGEILELKDTFNTMVDQLRSFASEVTRVAREVGTEGKLGGQASVPGVAGTWKDLTDSVNSMASNLTAQVRNIAAVTTAVARGDLTQKITVDVKGEILELKITFNTMVDQLSSFASEVTRVAREVGTEGKLGGQAEVPGVAGTWKDLTDSVNSMASNLTAQVRNIAAVTTAVANGDLSKKITVDVRGEILELKDTFNTMVDQLRSFASEVTRVAREVGTEGKLGGQASVPGVAGTWKDLTDSVNSMASNLTAQVRNIAAVTTAVANGDLSKKITVDVRGEILELKNTINNTMVDQLNAFASEVTRVAREVGTEGKLGGQASVPGVAGTWKDLTDNVNFMAGNLTSQVRGIAKVVTAVANGDLKRKLAFDAKGEIAALADTINGVIETLATFADQVTTVAREVGVEGKLGGQALVPGAAGTWKDLTDNVNQLAANLTTQVRAIAEVATAVTKGDLTRTIRVEAQGEVASLKDTINEMIQNLKDQTLKNSEQDWLKTNLAKFSRLLQGQKDLLTVGRLILSELAPVVGAQQGVFFTMTASKEEPVLKLLASYAYKERKNIDNQFKLGEGLVGQCALEKEKILLVNAPPDYIRITSGLGEAPPVNIIVIPVLFEGQVKAVIELASFERFSPTHQAFLDQLTESIGIVLNTIEANMRTEDLLKQSQSLARELQSQQEELQQTNAELGEKARLLAQQNVEVERKNREVEQARQALEEKARQLAITSKYKSEFLANMSHELRTPLNSLLILSDQLSKNADGNLTGRQVEFARTIHSSGNDLLALINDILDLSKIESGTVVVDVGELSFGDLQDYVERTFRHVAESKKLDFELSFASSLPQVIYTDAKRVQQVLKNLLSNAFKFTERGSVALHVDLATSGWSPENEDLSRAGAAIAMSVRDTGIGIQPDKQRIIFEAFQQADGSTSRKYGGTGLGLAISREIAWMLGGEIKLSSEPGSGSTFTLYLPVAYTPTRPLRKEPAVEVLSTPAELVPGDVAPRSVIEPSPHLVSQSIDDSANLQTGDRVVLVVENDAALARFVIDVAHEHEFKALVAYRGGAALSIAHERNVSAIALDVDLPDMDGWRVLDRLKHDLETRHLPVQVITTEEERERALRMGAKGVLCKPLKTRDALDGVFRRLSQFLVSCQRAVVLAEPSEAERRELIALLGGDDVTVRTVTTGEEALGTLLTERADVFVMRLDLPDMRCFKVIEQLAQGSEPTDLPILVYAPGDISAADEAQLSRFGQRMVLKLVRSKERLVDDVCLFLHRPVAALSERQRQILEDLHQSNKVLVGKKVLVVDDDIRNIFAMTTLLDAQQMRTVYAETGRAAIEVLERTRDIDIVLMDIMMPEMDGYDTIRAIRAAPGCCALPIIAVTAKAMKGDREKCFEAGANDYIPKPVDPEHLLATLRSWLHR
>CP012670.1|AUX26464.1|9171247_9171649_-|uncharacterized-protein
MSSGISEQVQRFLGQHITSIEQLEVLLLLRRTEEREWNAAAVAREIGSSMMSMHDRLAGLASRGLLVAREDSEDILYRYAPTTDETRRTVDDLAKAYKERRLSIINLIYAKPPPSDIQSFSEAFRITKKGGEG
>CP012670.1|AUX26463.1|9170984_9171245_-|membrane-protein
MAAAVYILCALTSAACTALLLRGYAKRKVRLLLWSGLCFAGLTANNILLFVDFVLIPDIDFSPLRHLTALIGLSLLLYGLIWDLRE
>CP012670.1|AUX26462.1|9170679_9170946_-|hypothetical-protein
MIGAMMFSYAVVALFFLRFWKQTRDRLFALFSAAFWLMMLGRIAVALNRVEDDAVHYLYMFRLCAYVLILYGIVDKNRGGGGPTMNMR
>CP012670.1|AUX26472.1|9191724_9192681_+|hypothetical-protein
MLALESMRSRFDAFGKNVLRDTLTRVGAADTEVEVIAASQTIDVWYVPDPARATARAELGLLGELAADPCQFEPFHDTPGPGELRGCVRKQLHWHHELARRAGGEVPFPRLCVLSSGRPATVLDAFRFEPEPGRAGLYRAAPGWRVDVVVIAELPRTRETLLLRLLGARAVLRHAVQDLVALPEDAWERSIALPWLVRLRFMSQQDPSARTAEQVEEEEIMAEVHEWFEQLKQSIRREGLKEGLAEGLKEGLAEGLKEGQIRALARQFEKKLGRPLSGAERSVLAERFDRLGLDRLDDVRLELSADALAAWLAEPTAR
>CP012670.1|AUX26473.1|9192881_9193166_+|uncharacterized-protein
MAEIHEWFEQFKQSIRKEALQEGFKEGLEKGLKEGQIRPLARQFEKKLGRPLSEAEQFVLVERFDRLGLNRLDDVRLELSADALAAWLAEPAAH
>CP012670.1|AUX26474.1|9193916_9198050_+|uncharacterized-protein
MTIQPRRSMNVDQRAASPLPAASPLPAAGPRPAAPPRLAAPPRLAAPPRLAAPPRPAAPPRSAAGSRLAAPPRLAALAIAAALAAPACAPPRAEAPAQPGGGLAATFARAMEAEAARSAAAAPYLDAIDQAVEAPRADGALAAVLASTDALVFGAGTASGPDPAASAIAFRSREALPEIARRLQRAWALADARGRGATEMPFLRGALASALHRIALHVGDETAAVTWSARRGCAGEAALIGPLDGPPLHGLARPSPVSSVPGAPLARSYPGIAPFARSVSPVVVRANACAIDVDAVSALQGTRAVVVDLHNPIAQRVSLALASSSAAELEIGGVPAIHRSYAAGGDEVTRLATVDAEPGTLRVVVRVAQKGDGGTIELDAWGEDGMPLRARAPRPGAAAAAAASRPTPVALAPARRAGPAELDLAAAALLALGDARAAEHLLDPAGDGLLADAAPRSPPSPLRALLYARAIRRVGDLPEPQVAERTRAALGRVLAAWPRSWEARLYLAELAERRGGPGQGTMDALRELGLHIAPPAPSGPSAPAVPDADRMVLAQLAAVARRASVTDVAEAAYAKLAAAAPGSALLASVDDRIHGRAGADAVKAACHGGLDRSGFACLVALQSAGDHAAVLAEIQRLRRLRRAPHALRDVELGERVARGDLRGALAVYDAMAPGERVLLEALGLAAGRGNARAVRGRLARDRAAAHDAPTGIAPIARALGLTPDPAPRLEAEGRKLVLEDQAKAFLPGAATAVLRHVERFDIAHDGLVYFVTYDLRRVSGTTDVAQGAATYGPLIEGRAVTRLLRRRIHKRDGRVLAPDAAANAAQEHSDLSQLEQGDYVEQITEGYALPGDSGQIVIDTSDLLPERTSVREAEIVVRRPSSLPLAIWSHPLLGEAEQRAEGASTVSVFRLEDQPPRRMEDGVPRLEMAVGVSLGTLTWGHVAAAIDENVRSLDDRDPFMARWAREAAGAERAPGPALLERVVAAAGKAVRLAGGADLSDLAALFNAGPQRTTARTMIELGQGSRSWVIYRALRELGVRADLAVAETEPFSASADFPPHAGRFRHPLVIARLPGGDVWIDADVEGPPLPPGRVSPELRGRSAMLPGGELVTVQGTSGEVGDEVDLRLRVDAQGNASGTLTILLQGRAAQALSEAFETVVGTARRDLLREVVLGWLPWADVEDVVVSSAEGAWGVTLRAAVSLHGFARPEGKDGATWTLPGVEPVHLVFPRAFTSTLGATYASRGARTSALAIETALQYHVRRRIELPEGHEVVRAPEGVRVEHPILTASRKGTYGGAAGGGAAGGGADGAAGRTIEEDFTLSLPTGTVDADDYNAFVERVQAVDSGFMAGIRVARPAGAAPKPGRGAGATGTTEKRP
>CP012670.1|AUX26475.1|9198046_9199261_+|UDP-N-acetylenolpyruvoylglucosamine-reductase
MSLEIRESVPLAPLTTLGVGGPARFFAEADGEAAVAEAFRLAEARGVPLLVLGGGSNLLVADRGVDALVLRVRLRGIEVERAGAARAGAHGGAARAAAHGGAARAAAHGGAADRALVHVGAGERWDDLAARAVEEGWAGVECLSGIPGDVGATPIQNVGAYGQEVAETIAEVRAIDRATGAAAVIAGADCGFGYRDSRFKRAWRGRYVITRVTFALRPGGAATVRYPELARALAAPAGGPAPPLGEVRRAILALRRGKSMVLDPADENGRSAGSFFMNPTLAAGDAAAAIARIEASGVLAPGEAIPRYPAGAGRVKLSAAWLIERAGFAKGTRHGAAGISTRHTLALVNRGGATAAELLELARRVRRGVLDRFGVALTPEPDLVGFEPGETDDLSGGRAAGQGG
>CP012670.1|AUX26476.1|9199493_9200573_+|prephenate-dehydratase
MATLDELRARIDGIDDRILDLLAERAEVAVEVAHAKRAANATRFHDPERERRVLTRLQARGAGRFPRDAIRVVFREVMSACLSLEEPMKVAFPGTEGAFAEVAARHLFGLAAVYRETGTIEGVFDAVRAGEAACGVVPVESSTEGSVTLTADALIESDLQIRQELVLDIAYCLFSKAAGLSGVSRVHGHAQALSHCRLWLAKHLPGAQIVQTVSAAEAAREALADPAAAAVGNRGAGELYGLPLLRERIHDRPENATRFIVIAPADAPPTGTDKTSIVFSVQEEPGALRRVLAIFDDAAINLTRIESRPSRQKHWDYVFLVDLEGHRSEARVGEAIERLRARCEMVKVLGSYPRSTGVR
>CP012670.1|AUX26477.1|9200619_9201513_+|uncharacterized-protein
MRGRSRYDRCGEKALLRGGNERVMWLSTGNDGMPEFEKIAKTGANAVRIVWLTEESAADLDRAITNALSQKLIPIVELHDATGKWDLLPSLVDCWTRIGCRRGDKKHQQNLLVNIGDEVADPAWEAGYKDAITRMRAAGIEVPLVIDASKWGQNIDQLQAVGPALVAHDPNILLSVHMWWIDGSAAAITRELDESVALDLPFIVGEFAHHAAYECSEHPFDHKTLLAKSVELEVGWLAWSWGAAENGDCQDDGPFDMTTDGTSAGLTGWGREVALTDPNSIKNTSVRPRSIETGSCR
>CP012670.1|AUX26478.1|9201830_9203279_+|hypothetical-protein
MAAGPHAELTPVLVLTASPGAGSIDRRAIDLIAAHVRPLGVRLQIVRPDAPRLALTRLLPDARALAEAWDARGVLWIDAGSSDELALYVVERDGEQIHGRRIPVPPGQTATALESLANIAAAVAEELREGHVVGLAEVDAAAAVPVQATLPAPAATAAAATAAAAPAAAATAPAAAPASAASAGPRGAPLAPSRPPTVAVLVGYSGANFSGEAPWQSAAALRASFAPVDRVVVGLGYDLIFPTAIGDERSGFELMRYPVLTSAQVRFGLPLGFDLLLGARASVDVVQRIPRRGAPPTTTTTSPPTTTSPPATTTSPPTTTSPPTTTSPPATTSPPTATTAPWRPPSWPPPWPPPWPPPPRPRGDAPLGGSPWPWPEADPQKPPPPPPETQTDVLVSVAPVAELGVPLTRELRLKLTLGVDFLLTRPDAAVHPSLALDPHPVRFLTGLGLELGFPPSAPPQPRARPADTPSHPRRRSPPQKEN
>CP012670.1|AUX26479.1|9203387_9203987_+|ECF-family-RNA-polymerase-sigma-factor
MMRPAPVLSTAAPASPDLERMRRAGAGDAAAQAWLMTQVISRVRRIARAFVRTSADADDAAQLALLAILESAATYRGEAAVEAWARRIAVRTVLRYARQQRRDGAPVAPESAIDEELVDTPRQRPGEALPREVREYLDGLPEAQRDVIILHHALEYSIEEIAGMTEVSPDTVKSRLRLGIGALRKQVRQDIAVGRKRAS
>CP012670.1|AUX26480.1|9203983_9205030_+|uncharacterized-protein
MTGPQKSEVDVDRLPTLLVTQARGDPLRPEDAALLRRAEEADPDFRVEAQLWAAIGALGDARGDGRELSEAALIERVLARAHGEPAPRSTARPRAAPRPMLRRGVAAAVAGVAVAATLLVALAAELMDGVDEAPPPAPGGSEALDPNGAPRMLPGPPSPAPPEEPPPGAGTVAAEPPPGAGAGTAATEPPPGAGAAASEPADTAVVEARHRAPRPPRPRPEEPAMGAEALLLRAQSRLGQGKTAEALAAYRALLARHPESPEARAALVSLGQIALRQGKAAEALGHFERYLAGGGPLAAEARIGRVQCLRRLGRTADERAAIAEFLSRHGESVHAPRLRARQTELGKR
>CP012670.1|AUX26481.1|9205407_9206406_+|hypothetical-protein
MSLLSLNCSSSAADGNDQPDTGNPGSSAASGGGSTASGGSTGDPTRLIGAFQVRSLPASPAEGTPEATGSTSVLGKIYDGPTPSQIVWEVQAEEGGCQLLTPRVPFCNQPCGGSAVCVEDDTCQPYPAAHSAGNVTVTGLNLESGEASFVMTPTANNYQPPAGVRLAYPPADEGQVVRLEASGDHFGAFTLEARGVSPLDLLNDTIRLDPGQPVRLEWAPPGQADISRVHVKLDISHHGGTKGMLECAAEDTGALDLPASLVTQLLDLGVAGFPTIIVTRRSVGSATIDAGRIDLIISSQIEQSVEIEGLTSCNDDAQCPDGQTCQADLTCQ

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Crispr_ID: CP012670_45

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_45

9834700-9834796

Orphan

Consensus_repeat	Method
GGACGATCCGGCGCGCGGGGGGAACGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_45

>merge|CP012670|45|9834700-9834796|CRISPRCasFinder
GGACGATCCGGCGCGCGGGGGGAACGACGGTCAGAGGGGTCCCCTCTGCCTCGGAGCTCGGAGGAGGAAGGACGATCCGGCGCGCGGGGGGAACGAC

>CP012670|45|41|9834700-9834796|CRISPRCasFinder
GGACGATCCGGCGCGCGGGGGGAACGAC	GGTCAGAGGGGTCCCCTCTGCCTCGGAGCTCGGAGGAGGAA
GGACGATCCGGCGCGCGGGGGGAACGAC

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX26941.1\|9838860_9839523_-\|LuxR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225107
CP012670.1\|AUX26936.1\|9834910_9835984_+\|exported-murein-endopeptidase	unknown	unknown	gnl\|CDD\|367482
CP012670.1\|AUX26939.1\|9837178_9838057_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|366166
CP012670.1\|AUX26929.1\|9824953_9825523_+\|membrane-protein	unknown	unknown	gnl\|CDD\|224882
CP012670.1\|AUX26940.1\|9838112_9838832_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|224276
CP012670.1\|AUX26933.1\|9828659_9831032_-\|haloacid-dehalogenase	unknown	unknown	gnl\|CDD\|319783
CP012670.1\|AUX26938.1\|9836290_9837100_-\|exodeoxyribonuclease-III	unknown	unknown	gnl\|CDD\|197320
CP012670.1\|AUX26945.1\|9844467_9846828_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379314
CP012670.1\|AUX26926.1\|9822917_9823496_+\|thiol:disulfide-interchange-protein-tlpA	unknown	unknown	gnl\|CDD\|239264
CP012670.1\|AUX26935.1\|9832490_9832913_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX26931.1\|9827136_9827508_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379208
CP012670.1\|AUX26934.1\|9831094_9832498_-\|multicopper-oxidase	unknown	unknown	gnl\|CDD\|225043
CP012670.1\|AUX26930.1\|9826011_9826851_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225136
CP012670.1\|AUX26942.1\|9839845_9840253_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
CP012670.1\|AUX26937.1\|9835859_9836357_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX26944.1\|9843414_9844389_+\|universal-stress-family-protein	unknown	unknown	gnl\|CDD\|366180
CP012670.1\|AUX26927.1\|9823671_9823944_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|197388
CP012670.1\|AUX26943.1\|9840376_9843421_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|224471
CP012670.1\|AUX26932.1\|9827602_9828538_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|368247
CP012670.1\|AUX26928.1\|9823952_9824957_+\|cation-transporter	unknown	unknown	gnl\|CDD\|224151

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX26945.1\|9844467_9846828_+\|hypothetical-protein	gnl\|CDD\|379314	pfam13654, AAA_32, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	4.88924e-137
CP012670.1\|AUX26936.1\|9834910_9835984_+\|exported-murein-endopeptidase	gnl\|CDD\|367482	pfam03411, Peptidase_M74, Penicillin-insensitive murein endopeptidase.	4.69214e-13
CP012670.1\|AUX26939.1\|9837178_9838057_-\|alpha/beta-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	6.25145e-16
CP012670.1\|AUX26929.1\|9824953_9825523_+\|membrane-protein	gnl\|CDD\|224882	COG1971, COG1971, Predicted membrane protein [Function unknown].	2.64587e-47
CP012670.1\|AUX26940.1\|9838112_9838832_+\|uncharacterized-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	1.62332e-21
CP012670.1\|AUX26933.1\|9828659_9831032_-\|haloacid-dehalogenase	gnl\|CDD\|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
CP012670.1\|AUX26938.1\|9836290_9837100_-\|exodeoxyribonuclease-III	gnl\|CDD\|197320	cd09086, ExoIII-like_AP-endo, Escherichia coli exonuclease III (ExoIII) and Neisseria meningitides NExo-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases. This subfamily includes Escherichia coli ExoIII, Neisseria meningitides NExo,and related proteins. These are ExoIII family AP endonucleases and they belong to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. AP endonucleases participate in the DNA base excision repair (BER) pathway. AP sites are one of the most common lesions in cellular DNA. During BER, the damaged DNA is first recognized by DNA glycosylase. AP endonucleases then catalyze the hydrolytic cleavage of the phosphodiester bond 5' to the AP site, and this is followed by the coordinated actions of DNA polymerase, deoxyribose phosphatase, and DNA ligase. If left unrepaired, AP sites block DNA replication, and have both mutagenic and cytotoxic effects. AP endonucleases can carry out a variety of excision and incision reactions on DNA, including 3'-5' exonuclease, 3'-deoxyribose phosphodiesterase, 3'-phosphatase, and occasionally, nonspecific DNase activities. Different AP endonuclease enzymes catalyze the different reactions with different efficiencies. Many organisms have two AP endonucleases, usually one is the dominant AP endonuclease, the other has weak AP endonuclease activity. For example, Neisseria meningitides Nape and NExo, and exonuclease III (ExoIII) and endonuclease IV (EndoIV) in Escherichia coli. NExo and ExoIII are found in this subfamily. NExo is the non-dominant AP endonuclease. It exhibits strong 3'-5' exonuclease and 3'-deoxyribose phosphodiesterase activities. Escherichia coli ExoIII is an active AP endonuclease, and in addition, it exhibits double strand (ds)-specific 3'-5' exonuclease, exonucleolytic RNase H, 3'-phosphomonoesterase and 3'-phosphodiesterase activities, all catalyzed by a single active site. Class II AP endonucleases have been classified into two families, designated ExoIII and EndoIV, based on their homology to the Escherichia coli enzymes ExoIII and endonuclease IV (EndoIV). This subfamily belongs to the ExoIII family; the EndoIV family belongs to a different superfamily.	7.74466e-153
CP012670.1\|AUX26926.1\|9822917_9823496_+\|thiol:disulfide-interchange-protein-tlpA	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.21171e-27
CP012670.1\|AUX26941.1\|9838860_9839523_-\|LuxR-family-transcriptional-regulator	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	5.26399e-65
CP012670.1\|AUX26931.1\|9827136_9827508_+\|hypothetical-protein	gnl\|CDD\|379208	pfam13473, Cupredoxin_1, Cupredoxin-like domain. The cupredoxin-like fold consists of a beta-sandwich with 7 strands in 2 beta-sheets, which is arranged in a Greek-key beta-barrel.	4.41386e-23
CP012670.1\|AUX26934.1\|9831094_9832498_-\|multicopper-oxidase	gnl\|CDD\|225043	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism].	3.80265e-89
CP012670.1\|AUX26930.1\|9826011_9826851_-\|hypothetical-protein	gnl\|CDD\|225136	COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism].	6.24471e-29
CP012670.1\|AUX26942.1\|9839845_9840253_+\|transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	4.82001e-23
CP012670.1\|AUX26944.1\|9843414_9844389_+\|universal-stress-family-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	2.94788e-08
CP012670.1\|AUX26927.1\|9823671_9823944_+\|hypothetical-protein	gnl\|CDD\|197388	cd10153, RcnR-FrmR-like_DUF156, Transcriptional regulators RcnR and FrmR, and related domains; this domain family was previously known as part of DUF156. This domain family includes various transcriptional regulators that respond to different stressors. It includes Escherichia coli RncR (formally known as YohL, nickel and cobalt-sensitive), and E. coli FrmR (formally known as YaiN, formaldehyde sensitive). Escherichia coli RncR represses expression of the gene encoding the nickel and cobalt-efflux protein RcnA; RcnA may act through modulating NikR, to repress the NIkABCDE nickel transporter. In vitro, purified RncR binds to the rncA promoter DNA fragment in the absence of Ni2+ or Co2+, and the affinity of RncR for this promoter is reduced in the presence of excess nickel. Escherichia coli FrmR regulates the formaldehyde degradation frmRAB operon. This family belongs to a larger superfamily that includes CsoRs (copper-sensitive operon repressors). CsoRs form homotetramers (dimer of dimers). In Mycobacterium tuberculosis CsoR, within each dimer, two Cys residues on opposite subunits, along with a His residue, bind the Cu(I) ion (forming a triagonal S2N coordination complex, C-H-C). These residues are conserved in the majority of members of this superfamily. In this family, however, not all these residues are conserved; in E.coli RcnR and FrmR there is a His or a Thr instead of the second Cys (C-H-H or C-H-T) respectively. For E. coli FrmR, an N-terminal His residue, not conserved in all members of this family, is also involved in metal binding (H-C-H-H). A conserved Tyr and a Glu residue that facilitate allosteric regulation of DNA binding for CsoRs are poorly conserved in this family.	6.10378e-39
CP012670.1\|AUX26943.1\|9840376_9843421_+\|uncharacterized-protein	gnl\|CDD\|224471	COG1554, ATH1, Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism].	0
CP012670.1\|AUX26932.1\|9827602_9828538_+\|uncharacterized-protein	gnl\|CDD\|368247	pfam05023, Phytochelatin, Phytochelatin synthase. Phytochelatin synthase is the enzyme responsible for the synthesis of heavy-metal-binding peptides (phytochelatins) from glutathione and related thiols. The crystal structure of a member of this family shows it to possess a papain fold. The enzyme catalyzes the deglycination of a GSH donor molecule. The enzyme contains a catalytic triad of cysteine, histidine and aspartate residues.	4.22536e-129
CP012670.1\|AUX26928.1\|9823952_9824957_+\|cation-transporter	gnl\|CDD\|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	4.511e-66

>CP012670.1|AUX26935.1|9832490_9832913_-|hypothetical-protein
MAFSRLTCLAAFGLALIACGDSEPGGPHGGTEGSGGGGGGPAAAAPEAPVLEFVMPMAGVLHVEWTPQEGCDQFEGERKDPMNDYVVAFTIAGSKNAYMDPEATEDMEYTYRLRCKVGEVYSAYSNEMSGNPTDEESSHE
>CP012670.1|AUX26934.1|9831094_9832498_-|multicopper-oxidase
MSERSWALLGVASLSLLAAGCGAERGGEPAAPDTWGEPTAALDTNPDPEVVEVDLEAREVEKTYLEGTTTTVWSYNGTVPGPLIEANLGDTLIVHFKNSLPEETTIHWHGIRVPNEMDGVMAVQAPIAPGETFTYRFTLRDAGFYWFHPHVMEPEQIQKGLFGLIRVRGPNEPEADDERIVVLGDVLLNEDGSFNEELDDDMIMMGREGNVVLVNGRTMPALEVRPGALTRLRIVNVANGRFFNLALPGHAFRVIGTDGGLIPKPYDAERLLISPGERYDVLLMAQGEPGTELTLMNEPYERGHHTGHADPMPLATVRIGQGPGPSGRALPETGPAIERLPGGPAEATITFDEQYVDGKLMFLIDGKAFPDVPPIDVESGSVHIYDLKNDAEMDHPFHLHGFFFQVLARDGVPVAEEELANKDTVILPQRSTVRIVTRFDAPGMWMYHCHILEHTEGGMMGEIHVAP
>CP012670.1|AUX26933.1|9828659_9831032_-|haloacid-dehalogenase
MDHDHHHTQGQPHPAGLERTKDPVCGMAVSPETAKWQHEHGGRTYLFCSQRCLAKFQADPEKYAPAQPTTGRGEPAAKPVEPTQPAAHVEYVCPMHPEVVRAEPGSCPICGMALEPRTVTLEDAPNPELADMSRRFWTSVPLSLVVLVLGMSEMIPGQPVQHLLGRWLAWIEFALATPVVLWCGAPFFERGWASIRTRHLNMFTLIAIGTGAAYAYSVVATLAPGVFPHAVRHGGAVPVYFEAASVIVSLVLLGQVLELRARSRTSSALKALLGLAPKTARRLGADGREEDVSLERVQPGDRLRVRPGEKIPVDGEVLEGTSAVDESMITGEPIPVEKAPGARVVGGTVNGTGGFVMRADRVGRDTLLARIVQMVGDAQRSRAPIQRLADAVAAYFVPAVIVIAVLTFVVWLLVGPEPRFSHALVNAVAVLIIACPCALGLATPISIMVGTGRGATAGILIKNAEALETFEKIDTLVVDKTGTLTEGKPKLASVATLGDLPPNEILRLAASLERGSEHPLASAIVAGAVEQALELLPAEGFRSITGKGVVGAVAGREVALGNLKLFEELGVPPEDLSRRAEERRQEGQTAMLVAVDGKAAGILGVADPVRDSTAEAVRVLRQEGIRVIMLTGDSRTTAEAVARKLGIEHVEAEVLPEQKAAVVKRLQAEGRVVAMTGDGINDAPALAQAHVGVAMGTGTDVAIESAGITLVRGDLRGLLRARRLSRATMRNIRQNLFFAFVYNALGVPIAAGVLYPVLGLLLSPMLASAAMSLSSVSVIGNALRLRRIEL
>CP012670.1|AUX26932.1|9827602_9828538_+|uncharacterized-protein
MHRVPSAMPSYHKRPLPPGCIAFSSEEGRAIFREALALGVMESFFPLIEQFHTQAEPAFCGLGTLVMVLNALEIDPGRAWKGPWRWFSEEQLDCCRSLDDVARDGITLTQLACLARCNGARADVRFAETSSLEALRAAVREATSRADDNHVVVAYDRWTLGQTGSGHFSPVGGLHPDRDLVLLLDVARFKYPPHWVPLEALYRAMLPVDPTSGRSRGFVTIRREHAVAPVAALHDANWAEVERFLRDLDGTDVLVLTGCLREGVSSMPRLLELLRRPDLPQTVEQHLARLRAQVAALDDRPPPLSQRSSWP
>CP012670.1|AUX26931.1|9827136_9827508_+|hypothetical-protein
MKITHAILSIALGIPSVASVLGCAQPASAEPQKAPRVVEIMVHGGFVPDKIAAVEGERLQLKLVRHDSGACTKEIVFPSLGIRKELPTGQPVTIDLPDLKAGELRFECGMGMLKGTLVVAPRK
>CP012670.1|AUX26930.1|9826011_9826851_-|hypothetical-protein
MNPLDPDKARTAVTYSAAADHFDDPPLAFWARIGARTVERARIEPGHRVLDVCSGTGSSAIPAARAVGPTGSVLAVDLAEALLDRGRAKARALGLSNIDFRCADVEALDLPPGSFDAIVCVFGIFFMPDMPAAVRRLWRWLKPGGTLAVTTWGTDVLEPGNTAFWDAIQAHRPDVYKTFRPWERINSPDALRAMLAAAGVAACAIDAERSRQPLTSPDDWWVIALGSGYRGTIDKLDPGTQEVVKRDILAPLRARNALSAETNALYAIARKPPGREAER
>CP012670.1|AUX26929.1|9824953_9825523_+|membrane-protein
MSFGAILLLALGLAMDATAVSAARGLATPVIRARHVALVAGFFGGFQALMPLIGWLLGARVGPLVQAWDHWIAFGLLGAIGGKMLWEARGGADDDDDAPKDLFALRVMFVLAIATSIDALAIGFTLPMLNAPFALSLVTIGITTAVLSAIGLFAGRRFGAMLGKRLDVAGGVVLIGLGVKILIEHLRAT
>CP012670.1|AUX26928.1|9823952_9824957_+|cation-transporter
MTNDATSDLLDELRHTHDHGAAVASHEARTRWVVALTLSMMVAELVVGYATNSLALTADGWHMATHAGALGMAALAYWFARRQSGSSVFSFGTGKVHALAGYTSAVVLALIALLMVVESLRRFLRPAPIAFSEALPVAVLGLAVNLVSVKLLHTDEHHGADHDEDHEHDDGEHAPHGHEHAHHGHDHNLRAAYFHVLADALTSVLAILALLGGRYFGWTFLDAAMGVVGGVVIARWSYGLCRQAAKQLLDVVPSEEIAKRIRRRIEAEFAGAAVVDLHLWDIGPRARACIVSIAARSPQPPIAYREALTSIASLQHVTVEVHPLPAAQRSAVAS
>CP012670.1|AUX26927.1|9823671_9823944_+|hypothetical-protein
MHTIESKKKLIARVRRIRGQLEAVERALEGEHGCAEVLQTVTSARGALNGLVGELIEGHIRTHVVDPERTTATQREAVEELVQIVRAYVK
>CP012670.1|AUX26926.1|9822917_9823496_+|thiol:disulfide-interchange-protein-tlpA
MSARARLRRIAAAAGVLVLVQALAVGLYWAVERRRDAERPGRPFAYERLDGTRPVPDAAFERPDGTSLHPGALRGRPVLLHFWATWCAPCRAELPRLLELGRELEEAGGLQLVAVSVDESWEVVRAFFGGEVPPGVVRAGSPAVQRRFGVSTLPDTFLVEEDGTMALRFTGARDWRAPEARALLMERERPGP
>CP012670.1|AUX26936.1|9834910_9835984_+|exported-murein-endopeptidase
MPLLRPPRCFAFRGRVAALFLALSIATPAAAAPTGALPGKEPAPARAEPPGESPRPSPPREAQRSATAAGGRARAAGRAAARTKGAERARSAKKRAAKRREGARGERGGNAVKAEVDDRKPLSKGAPNRGRLSGAVRLRSSRHVKVRKGARAWGLPVLVKALRRAAFQVAKKHGDSALLVGDLSAKAGGPLDGHNSHQTGRDADVGFYVVNSRGRTLRTDRFVAFDDKGNAIGLPGAKFDDKRNWALVEALLQDRRARVKYLFVSDALKARLLAYAAKRRVPQELRTRAAAAMMSPRDADLHNDHFHIRVMCPPSMRGACIEESLPRPPRSRPDCATDAAGKPEASATPTPAAGAPR
>CP012670.1|AUX26937.1|9835859_9836357_+|uncharacterized-protein
MAPASRSRCPGRPGPGPIARRTRPASRRRPRRPRPRQAPRADGARPQGQGTRPAIRRCLANHPRTPGQPSRDTSPGIRRCLASHPATPAQASADTSPGIRGHLARHPRTPRQASADTSPSIRRHLARHPRTPRQASADAWQPPPQALGIAPAGAGPSAISTTTGA
>CP012670.1|AUX26938.1|9836290_9837100_-|exodeoxyribonuclease-III
MRIASWNVNSIRTRLEQLTGWLVRAAPDVVCLQETKVEDGSFPEAALSEVGYRSVFFGQKSYNGVAIAARFGLSVEDVKKGLDGDEEDVARRMISATVEGIRVINVYVPNGQAVGTPAFAYKLAWLERLRAELEGRYRPDQELLICGDFNVAPEPIDVAEPKKWEGQVLFHPDERAALGRLLSWGLVDAFRACHPAKAAYSWWDYRMGAFRRNKGLRIDLALVTRPLAARCTDVSIDTRPRELQRPSDHAPVVVEIADGPAPAGAMPSA
>CP012670.1|AUX26939.1|9837178_9838057_-|alpha/beta-hydrolase
MNAHAGFLPYHALVTAPSAAPARWMLVLHGIFGSGANWRTFVRRLAEAQAQGGAPGAAARPWGFLLVDLRAHGLSQSPPPPHTVAAAAEDLLRLGDHLGLDVRGVMGHSFGGKVALAYLERRREGIERGFLLDADPSAKTASESGTESAAVLELLRAMPQPIASREAFLDAVQAAGFGRGIAEWLAMNVRRSDDGFRIRLDLDAMADLLSDYFARDLWHALEDPPAGAAAGERRIHVVLGGRSTAIPPASRGRFEALAARAPWLSVHVLPGAGHWLHVDDPDGLFDVIRASL
>CP012670.1|AUX26940.1|9838112_9838832_+|uncharacterized-protein
MAKKPPIVRAGAGVAGDQGSQPARPERFHGSALAGAELDDVDLRGARFHDVALTEAELDDVDLRGARLHDVALTEAELDDVDLRGARLHDATLAGADLDDVSLAGARIHNATLAGADLDDVSLAEARIHNADAAATRWSDVNLRRARFEDSDLRDVEIVGSRIDGLTIDGVRIDHLLEAAKRQPGAAKRQPGAAKRQPGAAKRQPGAAKRQPGASSAPEATPKDTLSRKKKTRRPTPGR
>CP012670.1|AUX26941.1|9838860_9839523_-|LuxR-family-transcriptional-regulator
MAETPASKLHIYLIDDHPVVREGFARALSDEPDMVVVGQAGTAADALRETASCKPDVVLVDLNIPDRDGIELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGAQGYLVKTSKLEEVIDGIRRIATGGAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARLTISPKTVETHRVRIYAKLGCKSAVELTRIAVRTGLIEA
>CP012670.1|AUX26942.1|9839845_9840253_+|transcriptional-regulator
MSSPGPSAPLAGPERPAQVDLFVVDDDASLVDSLTDLLSDEGYRVQGFTQPLEALARLKGGARPRAVLLDYVMPEMTGEEFLAALASSGVDVPVLLLSGVADPDIRGAVAGVLPKPFDVDRLLAVLGRLTGAVPG
>CP012670.1|AUX26943.1|9840376_9843421_+|uncharacterized-protein
MPSPLDHAIEAPSLSRGGSSHPAAASPSPTIRLPAELHHPFRFIAIDGGLLAGEAGDGAVVDGAAAPLLDALLALGVRVAILTGGAALAGGAARQLARGLDRRVRAENRRRLFVGALGGAELYGFDRRGDAIPLSDRAAPEARSALAALMAQVVTPLRIDQRDRLAIACDGDPGAQAAGGAGLRGAPELAGAIHAAAGAERLREILALQLEVERERGPFAAPRDAAWTVEEVGFDVAREHEIESRLAIANGYLGSRASLAEGSSVSRPATFIAGAFEPSADVSRVPELVIAPDWGRLNVAIEGEPFSVERSEQVLHHRRALDLRRGVLVRDCLRRAEGGHLAHLRTLHAASLADRHVLLEAASVTPMNFTGTARVDGILSGDVRSASGAAHWERFVADASARSLLLVGKTHGGLTAAMTSHLRLLPAHDAESPAEIGRCERAADARSIAERCDVSLRVAEPRRLFRTATLHTSRDTQAPRAAGEALQEELSRRSMEDLLGAHARAWAERWRRADVEIDGAPKIERALRFALYHLIGTANPDDPRCSVGARGLSGEAYRGHVFWDTETFLVPFYTHCYPEAARAMLLYRHRTLPGARRKARALGYEGALYAWESADTGDETTPPLIVSPFGEVTRVLSGEQEHHISADIAYAVHAYGRATCDVDFQRGEGAEILIETARFWASRAALEPDGRAHIRKVIGPDEYHEGVDDNAFTNWMARYNLRAAAAAVRRGIARKDVLEALDLRPEEVDRWRDIADRMALGIDPETGLIEQFAGYFGLEPFAIADYAVRSAPVDMLLGRERTQGCQVVKQADVVQLIALLWSAVPARARRESFLYYEPRTAHGSSLSPGAHALVAARLDLHGHAERYFDQTADIDLGNTMGNAAGGMHVAAMGSLWQAVAFGVAGLTRVPRGQLAGALPEAPGAPDQDETIGIEPHLLPGWRHLKIPISWRGRALEVHIEPGAVEIALEGSAPLPVCALDAGAPASAVLAEPGRRYVARRVGDRILPWEEITTC
>CP012670.1|AUX26944.1|9843414_9844389_+|universal-stress-family-protein
MLSAGHDGSSGGRGPSSATEPPVDAREELDALCPASGWRSKNVLVALHGRRAPGAVEAGRVIAGALGAPLHGLFVCPEPIEASEVPARVGVDPEALHGMVLDVETSEDLPGALAAAIACRSTAFVVVASEPEELKDERLGIGRLAARALESAVCGVVITGPDRPAQLRRILLPLDGNPSTAASIAPVGELARKLGAELDIVMIGGASPRGEDAEDAPPVSTPAPSEPGSMVAPLYVDQPQHEWPAFAEEFLDRFLSTIGRCPHDVSTRFFLGTGEPAAEILRFAAQLASDLLVLVWHGELDGRHGAVFRDVLCRAPCPVMVLRR
>CP012670.1|AUX26945.1|9844467_9846828_+|hypothetical-protein
MVARKLSASECRKIMEPQGFRFSTTDEVAPLSAGIGSQERALAALAFGLDIRQPRFHVVVVGAPGTGRTFCARAVAKRIAASRPTPDDILLLPNPHRPSEPTVLSLPPGEGRPFVEAMEDLHEKLVDALRGATEGERFKQARAKIQRRVNAEERRLEEQLKRTARELGLDLVRGEDEVQITLLEDASRAPDGEALVAIAGSVEEFETRLATVQDEADVELRGVVKQLLSDGVKGCFQPVRARFEGRNDISAFLADVETVVSKEFRLLVDEARGEEGATLPRGVVVPTLLTEHTPDSGAPVVEVPYPTLSALFGRTHAPPDSGFPPEPGFAVAGALHQAAGGFLILPAGALLKNEALYEQLKACLLAGTFIVPEHNPSYFRGTAEELLFPPIPIDVKVVLVTNPQLYQDLHEADPEFSQLFKVQARFETTISLDQALLTYPAFLAGLTRDRGLPPITADGVTALLFHGGRLAESQTKASAQVGLIAEVATEAGYRAQRRGRKVIDGAEVQEALEAARRRGSHFRDHVHELLADGTIRIDVTGRRVGQVNAISVLSDGPQTFGRPCRVTAVVYPGREGPVNIAREVEMSGPLHSKGVLVLNGFLAGRFAQQRPLSFGASLVFEQTYEPIEGDSASSSELYALLSALSGIPIRQELAATGSIDQQGTIQPVGGINDKIEAFFDLCAAKGLTGEQGVLIPSTNRDAVMLRGDVVTAIEAGRFHVYEVSSVEEGIEIITGVPAGVADADGRYPEGTVFHAVDQRLERFHQAIAETMRGGTSMDSQGVQRGR

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Crispr_ID: CP012670_46

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_46

10224378-10224496

Orphan

Consensus_repeat	Method
AATGCCCTCAGACCCCCCGCCCCCGCTGGGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_46

>merge|CP012670|46|10224378-10224496|CRISPRCasFinder
AATGCCCTCAGACCCCCCGCCCCCGCTGGGCCTACCGTCCACTTGCGGTGTTTCGCGCCATCCATGGGCCCGTGGCGGCGCTCCGGTAATGTCCTCAGACCCCCCGCCCCCGCTGGGCC

>CP012670|46|42|10224378-10224496|CRISPRCasFinder
AATGCCCTCAGACCCCCCGCCCCCGCTGGGCC	TACCGTCCACTTGCGGTGTTTCGCGCCATCCATGGGCCCGTGGCGGCGCTCCGGT
AATGTCCTCAGACCCCCCGCCCCCGCTGGGCC

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX27197.1\|10230310_10230460_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX27201.1\|10232666_10233395_+\|protein-phosphatase	unknown	unknown	gnl\|CDD\|378975
CP012670.1\|AUX27189.1\|10213594_10214524_-\|2-dehydropantoate-2-reductase	unknown	unknown	gnl\|CDD\|235821
CP012670.1\|AUX27188.1\|10213026_10213488_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX27198.1\|10230623_10230797_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|237940
CP012670.1\|AUX27191.1\|10217052_10219593_+\|nitrite-reductase	unknown	unknown	gnl\|CDD\|184951
CP012670.1\|AUX27193.1\|10220141_10221872_+\|4Fe-4S-ferredoxin	unknown	unknown	gnl\|CDD\|319893
CP012670.1\|AUX27196.1\|10228521_10229814_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|132912
CP012670.1\|AUX27185.1\|10209532_10210303_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|377317
CP012670.1\|AUX27203.1\|10234733_10235798_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
CP012670.1\|AUX27190.1\|10214619_10216470_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223715
CP012670.1\|AUX27186.1\|10210563_10211232_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|234637
CP012670.1\|AUX27192.1\|10219627_10220026_+\|nitrite-reductase	unknown	unknown	gnl\|CDD\|379380
CP012670.1\|AUX27187.1\|10211463_10212753_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|237537
CP012670.1\|AUX27202.1\|10233779_10234235_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX27205.1\|10237487_10239122_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|223685
CP012670.1\|AUX27199.1\|10230883_10231195_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX27200.1\|10231236_10232337_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|223197
CP012670.1\|AUX27194.1\|10221871_10224208_+\|nitrate-reductase	unknown	unknown	gnl\|CDD\|239155
CP012670.1\|AUX27204.1\|10235794_10237459_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223685

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX27201.1\|10232666_10233395_+\|protein-phosphatase	gnl\|CDD\|378975	pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain. Members of this family are part of the Calcineurin-like phosphoesterase superfamily.	1.47099e-17
CP012670.1\|AUX27189.1\|10213594_10214524_-\|2-dehydropantoate-2-reductase	gnl\|CDD\|235821	PRK06522, PRK06522, 2-dehydropantoate 2-reductase; Reviewed.	2.02192e-77
CP012670.1\|AUX27198.1\|10230623_10230797_-\|uncharacterized-protein	gnl\|CDD\|237940	PRK15313, PRK15313, intestinal colonization autotransporter adhesin MisL.	0.00278224
CP012670.1\|AUX27191.1\|10217052_10219593_+\|nitrite-reductase	gnl\|CDD\|184951	PRK14989, PRK14989, nitrite reductase subunit NirD; Provisional.	0
CP012670.1\|AUX27193.1\|10220141_10221872_+\|4Fe-4S-ferredoxin	gnl\|CDD\|319893	cd16371, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family. This family consists of the small beta iron-sulfur (FeS) subunit of the DMSO Reductase (DMSOR) family. Members of this family also contain a large, periplasmic molybdenum-containing alpha subunit and may have a small gamma subunit as well. Examples of heterodimeric members with alpha and beta subunits include arsenite oxidase, and tungsten-containing formate dehydrogenase (FDH-T) while heterotrimeric members containing alpha, beta, and gamma subunits include formate dehydrogenase-N (FDH-N), and nitrate reductase (NarGHI). The beta subunit contains four Fe4/S4 and/or Fe3/S4 clusters which transfer the electrons from the alpha subunit to a hydrophobic integral membrane protein, presumably a cytochrome containing two b-type heme groups. The reducing equivalents are then transferred to menaquinone, which finally reduces the electron-accepting enzyme system.	1.37743e-69
CP012670.1\|AUX27196.1\|10228521_10229814_-\|uncharacterized-protein	gnl\|CDD\|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	3.82731e-41
CP012670.1\|AUX27185.1\|10209532_10210303_+\|uncharacterized-protein	gnl\|CDD\|377317	pfam04343, DUF488, Protein of unknown function, DUF488. This family includes several proteins of uncharacterized function.	4.02563e-32
CP012670.1\|AUX27203.1\|10234733_10235798_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	0.000281038
CP012670.1\|AUX27190.1\|10214619_10216470_+\|hypothetical-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.79223e-52
CP012670.1\|AUX27186.1\|10210563_10211232_+\|uncharacterized-protein	gnl\|CDD\|234637	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG.	5.40965e-30
CP012670.1\|AUX27192.1\|10219627_10220026_+\|nitrite-reductase	gnl\|CDD\|379380	pfam13806, Rieske_2, Rieske-like [2Fe-2S] domain.	9.34752e-55
CP012670.1\|AUX27187.1\|10211463_10212753_+\|uncharacterized-protein	gnl\|CDD\|237537	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional.	3.44446e-10
CP012670.1\|AUX27205.1\|10237487_10239122_-\|uncharacterized-protein	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	6.05894e-56
CP012670.1\|AUX27200.1\|10231236_10232337_-\|uncharacterized-protein	gnl\|CDD\|223197	COG0119, LeuA, Isopropylmalate/homocitrate/citramalate synthases [Amino acid transport and metabolism].	3.59264e-45
CP012670.1\|AUX27194.1\|10221871_10224208_+\|nitrate-reductase	gnl\|CDD\|239155	cd02754, MopB_Nitrate-R-NapA-like, Nitrate reductases, NapA (Nitrate-R-NapA), NasA, and NarB catalyze the reduction of nitrate to nitrite. Monomeric Nas is located in the cytoplasm and participates in nitrogen assimilation. Dimeric Nap is located in the periplasm and is coupled to quinol oxidation via a membrane-anchored tetraheme cytochrome. Members of the MopB_Nitrate-R-NapA CD belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
CP012670.1\|AUX27204.1\|10235794_10237459_-\|hypothetical-protein	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	1.83634e-50

>CP012670.1|AUX27194.1|10221871_10224208_+|nitrate-reductase
MTTRDANGPTKPSPANKPSPASETSPANGPSPAGETSLERKAPPERKASDNILLQRNGPLTRELLLTPGEFGLGRVPARLKPDQTTTMVCGFCSTGCGLNIHLKDGEAVNLTPNTDYPVNLGMACPKGWEALTPLRASDRATAPLLRNARGKLERVEWDVALRTFVDRFKAIQEAHGKGSVAFISTGQIVTEEMAFLGALAKFGMGMLHGDGNTRQCMATAVVAYKEAFGFDAPPYTYRDFEESDVVVLVGSNLCIAHPIMWERLCKNRNRPAILVVDPRKTETAMAATAHYALRPKSDLTLFYGIAHLLIQRGWIDEAFIREHTIEFEAFKAHVEGFTPARVSEATGLSEEQLSSFAETIHRGKRVSFWWTMGVNQSHEGVRVAQSLINLALMTGNIGRPGTGANSITGQCNAMGSRMFSNTTGLFAGRDFTKEEHRREVADLLDIPEEVIPSRNSLAYDRIIEGILKGKIKGLWIIATNPAHSWINQEDLHELLGRLEFLVVQDMFTTTETVERAHLVLPAASWAEKEGTFINSERRIGLVKKVARAPGQALADFHIFQLIAQYWGCGDLFKEWRSPEAVFHILKRLSKGQPCDISGIRDYAMIDARGGIQWPFPEGAEPEDNERRLFEDGRFFRPDQRAKFAFQAPRPLPEPTDEQYPFTLLTGRGSSSQWHTQTRTKKSAVLRRLYPKEIYVEVSPVDARRLGVAMNEWVVVASRRAEIKARAFITNSVQPGELFIPMHYEVTNKLTFPAFDQYSRQPSYKACAVKVRREEDRG
>CP012670.1|AUX27193.1|10220141_10221872_+|4Fe-4S-ferredoxin
MSVAKVSDTHFRLPVVNSPKRRQDSNQKLLEALLEQQQELTAVERFSRLHEEHALPAQSRYYRDLIPLERPKPGQQYAFEVDLDACTACKACVTACHSLNGLDESEVWRSVGLLHGGTPQAPAQQSVTTSCHHCLDPACMSGCPVKAYEKDPVTGIVKHLDDQCIGCQYCILMCPYDAPKFNPERGIVRKCDMCSDRLANDEAPACVQSCPNGAIRITVVDQANAVQESEANIFLPGAPAPGHTLPTTSYKTKRSFPRNMLPADFYEVNREHSHPPLVIMLVLTQLSVGAFCVSLALNKVLGEQATQDFGGHSATFALVFGLAALAASLLHLGRPQYAFRAFLGLKTSWLSREILGFSLFAGAGTLYAASFWVASMPALPALLPLRHLQGPLSYTVALSGILGVFCSVMVYAATQREHWRGALTGFKFAATAAVLGSSTILMIALLLSREHAALLLTGGFRALSAFLCATMALKLLVELSVFRHLRKRSHSTLKRSAILMTGELQGATAWRFACGALGGIVLPALSLFAAPDSGISSEALMAMAVVAFLFCLSGELFERYLFFAAAPASKMPGGLS
>CP012670.1|AUX27192.1|10219627_10220026_+|nitrite-reductase
MNERHPEALREEGTTEGWVDVCAVEDIIPSTGVCALVGKRQIAVIRVGEGEEIYAISNFDPFSKAFVLSRGIVGDKGGVPKIASPIYKQSFDLRTGQCLDDPGVRVPVFPARVRGGRVEVQAAAQPPERRAG
>CP012670.1|AUX27191.1|10217052_10219593_+|nitrite-reductase
MSKKKDLIVIGNGMVGHKFIENMVLGGFLREWNITTFCEEPRLAYDRVNLSAFFSGKSAADLSMVKPGLYEEAGVHVLLGDKAVAIDRQKKCVTSAKGETVYYDKLVLATGSYPFVPPIKGRDTKGCFVYRTIEDLEAMQAHAKVARVGVVVGGGLLGLEAANALKNMGLETHVVEFAPRLMALQVDEAGGMILRRKIEELGVEVHTNMSTTEIVAERGRVARMLFADQSELATDMIVFSAGIRPRDELARKCELALGNRGGVAIDQRCQTSDPDILAIGECASFNNQLYGLVAPGYHMARVAVDALTGGQERFGGFDMSTKLKLMGVDVASFGDAFAAQPGARVISFMNATSNVYKKLVVSADGELLLGGIMVGDASNYGQLLQLVQNKIALPPHPEDLIVAPRDGAKPAGLGVEALPDSATICSCLNVTKKTICSAICDDKLTTVAAIKGQTKAGTGCGSCTTLITDLLKKELKKAGVAVNNHICEHFGYSRQELYHLIRIHEIRSFDDLLARHGKGKGCEICKPAVASILASTWNEHILSKRHLPLQDTNDRFMANVQRDGTYSVVPRVAGGEITPEQLIALGQVAKKYNLYSKITGGQRVDLFGARLEQLPDIWAELIAAGFESGHAYGKALRTVKSCVGSTWCRYGVQDSVGFAITLENRYKGLRSPHKLKSAVSGCARECAEAQGKDFGIIATEKGYNLYLCGNGGMKPQHAQLFAADLDEATVIKYLDRFLMFYIRTADKLQRTATWFNNLEGGMDYLKQVVIEDSLGICEELERDMAHVIATYECEWKAAISDPEKLKQFRPFVNAREPDRSIVFVSERAQHRPAAWKEKATAVEEMI
>CP012670.1|AUX27190.1|10214619_10216470_+|hypothetical-protein
MRRPDAVTTPRTSDGPSSGASPSPTLGAGQERLLAEQETGRLLAEQEARRAAERAAQRMAGLQRITAALADALTSEAVAEVVIDQGIAAAGAYAGTIAVAAGDVLECLAAVGYPEAAVERYRELPVTADLPLAEAMRTGAPLWLRSREELCARYPAFAARDLTVTTASLCCVPLRVQDRPIGVLGLSFADPRPFDQEEREFLVAMSRQCAQAIERARLHEERAAIIERERRVALENARLYREAYEADRRKDEFIAMLSHELRNPLAPITTGLELLRMNMSDRGERDDQQILATLERQVKTIVRLVDDLLDVSRITRGKIALKRERLELGAVIEAAVESARPLLQQRGHALSVSVEPAVFVHGDRVRLEQVVVNLLNNAIKYTNPGGHVSLACEAKGGEAWLQVVDTGVGIPAELLPHVFEPFMQARRSLDRSQGGLGVGLTLVKRLAELHGGRVEARSAGAGEGTAISVWLPLAGAAEEAPAPRPSEAPSGGGAALRVLLVDDNVDAADGLRRILSLHGHTVAMAHDGPAAIEAARAGRPELILLDIGLPGMDGYEVVRRLRAAPELQRAYIAAVSGYGQDQDRRRSREAGFDAHLTKPVASDQLLELVARASRPG
>CP012670.1|AUX27189.1|10213594_10214524_-|2-dehydropantoate-2-reductase
MRILVVGAGAVGGYFGARLGLAGEDVTFVARGAHAEAMRSRGLVLRTPAGELRTPPLRVTALDGARGPFDLALVAVKWPSLAAVSAALPALLAPDGLCVPLLNGLDSEDAVARDLGASRVIAAVAFMSASLTGPGEIHTVAPTRAGLAPYRPGQEPRVEAVAARLERAGIPVRRASDHRAMLWEKMVWNAPFNAICALTDQRAGVAAERMEDLVRAGMLEVIAVARAEGTDISGAIADAMIAMTRKEYPLTEPSMLQDVRAGRPTEVDILQGAVVDRGRRAGVDTPVLRMLAALLRGLAPRPAAPASAG
>CP012670.1|AUX27188.1|10213026_10213488_+|uncharacterized-protein
MEKLALFTSAAAVAVAMIGVPSTARAQERARDTVTITDSVPNRGLIWSGVAVLGTTYGISTVVAAVSDKPADRALWVPVAGPWIDLGSRGRCRGSCNHEATNKVLLVADGLGQAIGALQILGGFLFPAKRTVTEVGRVQILPMGRGLAARTVF
>CP012670.1|AUX27187.1|10211463_10212753_+|uncharacterized-protein
MKVQRISAILLTAGAFSAGFMGCGSDDADDGAGGGSTVTTTTTSTTTPTSTVSTGTTTPAVAEFLGAACEVDADCGPEGVCFPESDPEGGPPGGYCTKDCEEDSDCEGDGSLCLEGACYLGCTPGEPKLRGAADDLDPYKCQGREELRCQNIDIGVLCLPTCGSDSQCSGDRKCDLRSGFCVDEPPEGLPLGAACDPDAEENACAGLCAVFPGDVGACSQYCSFGGDPFESDCGGIENGLCVYGASLGVSDAGLCTRACTAHTDCMVPQGRCEFLGLDTHGFCTYDPKECEEKNDCERSEECAETPDGFFCLDPRYPLSNGSTGEGGAGGEGGAGGGTGEGGAGGTAGGGTGEGGAGGTAGGGTGEGGAGGTAGGGTGEGGAGGTAGGGTGEGGAGGTAGGGTGEGGAGGTAGGGTAGGGTGEGGAGGA
>CP012670.1|AUX27186.1|10210563_10211232_+|uncharacterized-protein
MDLGGPERMAERIAALLAGREASLPARAPAALARWIELVAAWNAKVDLTAARSADELADLMLADARLLSEHVPEGRRVVDVGTGAGAPGLPLALLRPDLEMTLVEPLQKRVAFLRTATGTLVQQGELARAPRVERARGEDLVRAGRSFEVAISRATLAPEAWLPLGAALTAGEPPARREVWVLLARDEPPSLPGWAPAGDHRYRWPLTGAERRAVRYVPVIT
>CP012670.1|AUX27185.1|10209532_10210303_+|uncharacterized-protein
MRSRSSRCRPSHPWLSLYPLRPLRFLLVPHLYALSSLTAAARVAGPRAPRNAFPVGTVFTVGHGTRSLEELVELLGEGPADTLVDVRRFPGSSRSPHLSRDALARALPPLGVTYVFRGDSLGGRRSGREGSPHLAWENASFRAYADHMETDAFQRALAELEAEARAGRRMALMCAETLWWRCHRRLIADALVARGLPVVHLLGRGARAPHTLNPAARIDGAGHLVYDLGAQRALPLGDAAAPGGRRGGRTGARHGR
>CP012670.1|AUX27196.1|10228521_10229814_-|uncharacterized-protein
MDPGETAHPSLHGELVALRARMSRLEQIERELRAELRRVYLMHEAAPYLICVHDPVEKRTLYENRSLAAALGYPNDDAAYSGFGGFLSLAHPDDQARAREQLDGNDSAGERAEIACRLRRADGSWRWISRRDIVLERDDAGAPRQIMSVLHDITEQREAEAEQRRQAEDLSVSKRLVDNALDGITLTSMAGEVIYANVAFKTMSGFGDGAVGRMMTDFYSPESYHQLSAVVVPTLTRDGAWRGVLRIRRPDGSEWMGQTSAFMIAGPSGEPTGMAAFWRDITEQLRYEQEKLAQIQVIEAQQAALRELGTPLIPIADGVIAMPLIGAIDRDRAQQILEALLGALGETQAAVAILDITGVKAVDDEVAAALVRVAQAASLLGAEVVLTGIRPVVAQAMVDLGVELRGLVTCGTLQSGVAYALQRKVRPGRA
>CP012670.1|AUX27197.1|10230310_10230460_+|uncharacterized-protein
MEHDAVGVRAARLAVQYFLDCNGRFPLTTSAHADRPGRNVVCWGRKVVG
>CP012670.1|AUX27198.1|10230623_10230797_-|uncharacterized-protein
MNPRMQEPPKPEGPTDDDFSQPPNPGDPGPEQPKPSAPVDPAEDPRIPHPGEIPRGI
>CP012670.1|AUX27199.1|10230883_10231195_+|uncharacterized-protein
MLSIRRDPFPLEAARDLLGIVRALYAAARARGAGVADLHALAEIGDDLRQAIALASAHPPGTLGYSAAWARAERAAGRVGELVDALAPAAPIVRAALARVAPR
>CP012670.1|AUX27200.1|10231236_10232337_-|uncharacterized-protein
MNADVRDPGAAAPFDWNRTEAAPQAPPAPAGGEAWLPFGRAARPVEVLDETLRDGIQGVSIVNPPRARRIELLHAMASVGVDVVNLGIPAAGPGHFEDACLLAREIVAARLPLALTAAARTIDADVEAIARVAERVGTPIEAYAFIGSSPIRHFVEGWGPDFLVRRVEGAARAAAAAGLSFCLVAEDATRSPPEALRALFRAAVGAGAARVCLCDTTGHVTPPGVAALIAFARRELAALGAARIALDWHGHNDRGLGLSAALWAVACGVERVHATALGVGERAGNSSLELLLDNLGRLGARPAVPRERLAAYCAVASRALGWPIPADHPIAGARLRAPPPRGAAPAEPVEPALPAGLATPERAPRR
>CP012670.1|AUX27201.1|10232666_10233395_+|protein-phosphatase
MRIALISDIHANEVALRAVMASIEEVGVDHVVCLGDVATLGPRPGATLDVLRELGCPCILGNHDEFLLEPALIRTYTDVPIVVDAVDWCRDQLSGDDLAFLRTFQARLEIPLDAGATLLLFHGSPRSHMENLLADTPPEELDRALAGHAATVMAGGHTHIQMLRQHRGTLLVNPGSVGLPFKEFAAGGPPTLLDHAEYATVEARRGAVQVTLHRVPVDREALREAARACDNPMRGALLRHYA
>CP012670.1|AUX27202.1|10233779_10234235_+|hypothetical-protein
MTKYEQVKLSYEASKAAIGQVAEELLYWIYELRDHMDWPRDRWALNRVTGDVHASGLLQRFVVESQPGVGEVLKCQLSLTIDDEPPFTVDLFALGRTDRGLLVVLVAGEQITVSKSSPEVFFDKAVEHIRQQARRVGKMRRVGAGPTGRTA
>CP012670.1|AUX27203.1|10234733_10235798_-|hypothetical-protein
MTAEARRAHARAGRAGPAMSRVVALAAGLAAAVPGRSGAQPRPAPVTVAPAAHAPAAGQLDGATYDYAHPSAPAHAAARDEAAGAGAAADARATEAGAAADAGAAARPVPPEQRWMGRVFVHRLAAAAPARPLPILVFLHGTNAEQIRYRWMGGGREGDVRRIAAALMEAGQIPPILVAGPSAVLPAAIAAPRTSWPAFDLDTFLDATAARLRGVATLDRTRVLVAGHSGGGCNKAGGVVTALRASTPVHAALVIDTCMDADIALPLALSLPTTHVVVSWQTMTWARRPLGAFRRAFQAAVEAHPAAPGVLRALEHLRPTEPMPHDAMVPLVLRRWLPPLLSPDAAPSIPCVSP
>CP012670.1|AUX27204.1|10235794_10237459_-|hypothetical-protein
MRGERGTRGERSTRGTRRRGRPSLPWIAALAAAVAGGCAPAGDGRAPRAPAQQAAPANGAPEATPPAAALREQPPPSGPARLARMPAISWAELPTGLSVATAVHRALPLVEVRVVVHGGSAADGERTGLAALTGELLVHGGAGGLSGRELLARVASLGASLRVDTGLDATVIGLRTTPDRLAEAIELLGLVVQRPRLDAAELGKLKARAVEAALDRARLDDRWGARMVLFRDLYALPGELHPYASFAATAAELPKITAADCRAFHGKWYVPRNTVVVVAGDTTPEAVRAAVEKAFTDRRADEPPALSFTDPVPPGSLKITIVDRPKSAESELFLGVLGPERRDPAWPSFAVAGEVLGGPSGRLSQDLRARRGVARAAAATTLDVAHGPVPLVAHARAPSASTGLVAEELLAHAERLAATTPSQEEVEVAARRLAAGLGLAVETAGGLADEIVALQVLDLPDDHHDGYRRELRDITPVLAGKAAADHVRPSRAALVVTGDAQEIGPMLSRFGDVKVVDPTRAFARKRTIPRAPGGAPGQAPAPDGAAHAPAQDRP
>CP012670.1|AUX27205.1|10237487_10239122_-|uncharacterized-protein
MMVSRLLLRRALTTGLAALGLLTAGAPWPASAAPPSGQPTKAAAGAAKAAAAAAEAPLSLALPVERVTLQNGLRVVLSADRSSPTVAVAVTYDAGSRDEPSGRSGVASLVTGLMARGSRNAPPGEPRRLVAERGGELSAVTGVDRTTFTTALPANELALALWLEADRMRAPDLSAAAFEAQRKEALARRDAALGAAYGKGPDRLGSLVFQGYWPHEHPALGQADDLAGAELAWVRDFHAAHYGPGRAVLTLAGDFDAGEAMELVHKYFDDIPAAPATPFKDVPFPEQTSQRTAVVRDSAVRVPSILYGWAIPPRAKADHRALELAAFLLGHGESSRLAALLVRDKAAAQSVRVATHGHRGPDLFSIDVRLVDGARVGDVEKLIEGEIRSLATAGPSQAELSRARRLLQSAFVARLGGASARARALGEHELLFGDAAHLNGELARYFAVTREDVQRAVREHLGPTRRTIVETYPPDAEELSPRPRPRPPAAAASRKNGRGAQATPGKGSTKARGAAARPAPKAARPAPKAAQPAPKRKPAKTKKK

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Crispr_ID: CP012670_47

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_47

10489524-10489634

Orphan

Consensus_repeat	Method
CTCCCGGGAGGCTTCGGAGAGCCTCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_47

>merge|CP012670|47|10489524-10489634|CRISPRCasFinder
CTCCCGGGAGGCTTCGGAGAGCCTCCGGGTTGAATTTCAATCCTCCCGGGAGGCTCCCGAGAGCCTCCGGGTTGAATTTCAATCCTCCCGGGAGGCTCCGGAGAGCCTCCG

>CP012670|47|43|10489524-10489634|CRISPRCasFinder
CTCCCGGGAGGCTTCGGAGAGCCTCCG	GGTTGAATTTCAATCCTCCCGGGAGGCTCCCGAGAGCCTCCGGGTTGAATTTCAATC
CTCCCGGGAGGCTCCGGAGAGCCTCCG

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX27377.1\|10478817_10481046_+\|biotin-carboxylase	unknown	unknown	gnl\|CDD\|180406
CP012670.1\|AUX27382.1\|10487718_10489344_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235906
CP012670.1\|AUX27380.1\|10484259_10484700_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX27373.1\|10474418_10475513_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX27392.1\|10500181_10500643_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX27384.1\|10490308_10492030_+\|DNA-polymerase-III	unknown	unknown	gnl\|CDD\|236311
CP012670.1\|AUX27388.1\|10495266_10496664_+\|cystathionine-beta-synthase	unknown	unknown	gnl\|CDD\|223110
CP012670.1\|AUX27374.1\|10475946_10476177_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|237030
CP012670.1\|AUX27389.1\|10496722_10497655_+\|cyclase	unknown	unknown	gnl\|CDD\|224790
CP012670.1\|AUX27386.1\|10493504_10493912_+\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX27390.1\|10497658_10498510_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX27378.1\|10481342_10482509_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX27385.1\|10492377_10493268_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378964
CP012670.1\|AUX27376.1\|10477244_10478597_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377406
CP012670.1\|AUX27391.1\|10499230_10500154_+\|thioredoxin-reductase	unknown	unknown	gnl\|CDD\|223566
CP012670.1\|AUX27381.1\|10484833_10487728_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235906
CP012670.1\|AUX27375.1\|10476468_10477248_+\|ECF-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
CP012670.1\|AUX27387.1\|10494179_10494836_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|284923
CP012670.1\|AUX27383.1\|10489638_10490094_-\|alkylhydroperoxidase	unknown	unknown	gnl\|CDD\|225039
CP012670.1\|AUX27379.1\|10482562_10483987_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379106

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX27377.1\|10478817_10481046_+\|biotin-carboxylase	gnl\|CDD\|180406	PRK06111, PRK06111, acetyl-CoA carboxylase biotin carboxylase subunit; Validated.	2.22843e-75
CP012670.1\|AUX27382.1\|10487718_10489344_+\|hypothetical-protein	gnl\|CDD\|235906	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau.	2.36997e-07
CP012670.1\|AUX27379.1\|10482562_10483987_+\|hypothetical-protein	gnl\|CDD\|379106	pfam13289, SIR2_2, SIR2-like domain. This family of proteins are related to the sirtuins.	1.05155e-42
CP012670.1\|AUX27384.1\|10490308_10492030_+\|DNA-polymerase-III	gnl\|CDD\|236311	PRK08609, PRK08609, DNA polymerase/3'-5' exonuclease PolX.	2.51264e-139
CP012670.1\|AUX27388.1\|10495266_10496664_+\|cystathionine-beta-synthase	gnl\|CDD\|223110	COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism].	1.54071e-124
CP012670.1\|AUX27374.1\|10475946_10476177_-\|uncharacterized-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	4.02532e-08
CP012670.1\|AUX27389.1\|10496722_10497655_+\|cyclase	gnl\|CDD\|224790	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism].	2.11136e-75
CP012670.1\|AUX27385.1\|10492377_10493268_+\|hypothetical-protein	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	6.21966e-10
CP012670.1\|AUX27376.1\|10477244_10478597_+\|hypothetical-protein	gnl\|CDD\|377406	pfam04773, FecR, FecR protein. FecR is involved in regulation of iron dicitrate transport. In the absence of citrate FecR inactivates FecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm.	9.50721e-05
CP012670.1\|AUX27391.1\|10499230_10500154_+\|thioredoxin-reductase	gnl\|CDD\|223566	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones].	3.19537e-44
CP012670.1\|AUX27381.1\|10484833_10487728_+\|hypothetical-protein	gnl\|CDD\|235906	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau.	0.00586133
CP012670.1\|AUX27375.1\|10476468_10477248_+\|ECF-family-RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	4.68227e-28
CP012670.1\|AUX27387.1\|10494179_10494836_-\|uncharacterized-protein	gnl\|CDD\|284923	pfam07602, DUF1565, Protein of unknown function (DUF1565). These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans. Some of these proteins also contain characterized domains such as pfam00395 and pfam03422.	0.00171375
CP012670.1\|AUX27383.1\|10489638_10490094_-\|alkylhydroperoxidase	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	6.1916e-22

>CP012670.1|AUX27382.1|10487718_10489344_+|hypothetical-protein
MAVSGAARARRPRAARSRAARACAGALALGALASSPGCSGAPEVPVPPPGGAAGAATASGCREGRCSQAEALLAAARAFSDVRHDYLLDTSSAMVPGRGLSRSASGAFSPVGLACARSRAEAAPSVAAAPSVAAAPSVAAAPSVAETPAVAPAPAVAPAPGERAIDFRYVGVAVDSVLVGADVDLPAYFSAGGTLDRRRLRLIAMALVADEDPQFFEPTGDVVPAAGGGCACGRATHFIGAVRRGAMVAYETDVTAGEAHGTALGLLKARIAAGDRRVTMTSVGELSIEGVEGAPVAGEAGGAAGGGSALGALRLEVKKAVPLAYAVYPIADVCRFSLAEPEITPLPLDFGVVPYGATATAQAILRNRAQVDVRVTHGERSVDVPAHGSAALTFTWTPEGQAAGCERQTRRDTFLVRPKDPGAAVVPRERAVVVPQQVTTGMPTFSKHEPIATETGRSPDYGRASVDWTCPAGYVVQQCEPQRSSCLSSTGSCNAEGYRLTAEATPDGRGCSFRCTGPSSSLWGDHGCAYTAAMVCRLACQ
>CP012670.1|AUX27381.1|10484833_10487728_+|hypothetical-protein
MVAAMLVRSPLSWIRRGPVGGASRLVGPVLRRRSPGLLGAALALVLGCSGGATPAPAARPAPVVKTPSVRPRAPEGPPLLPAHVIAALEDEDATPYLARRGDEALLLYAAGGTWRTRVLGADGAPRGDAIEAGPVPADVPVAALRAAPKGYLAAWIEQLEGGRAVRVLALDPAGKPLAPASLVAHTAEEISWLDVLPNAKGALVVWEVPREDRVDVVVSAVAQGSGPAIKPTTPASVAREVLGWNAVATERGAAVALVLPRPGPAAKGERRPATKAAAEDALDAAKLGAVSILEIDAAGKVSAPAVVSPEPTARTDLEIVAAGGRYLLTWTDERDIDGAVYLAAVEPGGKVVVAARPATPPSGEQALVSLVAPSAEGGGRALLAWEDMLRARGGAEGRGAGRLIHLAAVGPDGALGAARAGLVFSASGPPDLAADGDGFAAVTLAPAALEATGGEAAAPIWPTFVRFGPDLSVRAAEPVRAAPFAATEGVPYLVRGLSCHGGACWTLASAAAGAAPRQGGAGEAAGAGAPLALVSLPVRDSAWRAPAFREDREPPPRATALRALVEGDHIARVAAADLGGGALLAAWVTYFVEGASDAPRGQDLSATLAVRAASASGLGKLNVVSQRASSLGGVAIAAGPPAPADPKRQAGAAQAESVLAWVARERGETQVFVTKLDAAGAKVAQKRLTTAPRKKRGGVPSEASDVAIAHDGAGGYIVAWIDTRDGNAEVYAARVDRALNRTVPDRRITSAPLDASEVQIAVRGQETWLVWSDARPAGDAAGAGDPGGESAGDIYLARLDTKTLQKLGDEARLHASPEHSRSPVLAPSEGGLVVGWVEEPAGEGASTGGGARLARLDDKGALVGPPVALAGPEGAAVSSVALACGEVCRGALASAPGDSVSLSAFTLAPGGGAASPPKPLVGLTGAASQDVSPVFAGRSGASLFFADDAASGSGRVRWMTIAWP
>CP012670.1|AUX27380.1|10484259_10484700_+|hypothetical-protein
MAIVSPMHRERVVTARESSQTEARSADDELPPESGRQPAVYTARGGPTGEPWPERPPVLTPDEARELSERWSAIQAGFIEAPRLAVEQADALVTEVIQRVAQSFREERIALQQLLDSDLGRSEVSTEELRLALRRYRSLLGRLLAF
>CP012670.1|AUX27379.1|10482562_10483987_+|hypothetical-protein
MDDEILEQLRERYASGNLIVFAGAGVSAGAGMPTWKQLAERLRDSARRKGADRAALDEIQHYIDANQLINALSAVKLALGPQDFGAIIDGALDDRGREIPETAKAIAALKPRLKAVLTTNIDRFLERAFAGEWRAVDRPTGDIAADRGYILKLHGTLRAWDTWVFSRDQYDSAMFGSPLLQDAFGALYRTHTLLFVGFGLADDNIDQTLARVRALSGGQPPVHFALVPEGVQPFRRRLLEASGIRLLVYENRGGDHAEVAEILRGLEPGAARPAPPPPSPPPPQDPRGVSATGRPVSTGSTAERPAGSTAGRPADVVPSAKGPVRVFFSYASRDEDLLAQLEAQMSPLRRQGLVAPWHSGKIGAGEDLERTTREQLEAADLILLLVSASYLASEQDDAQVSRAMERRAANQATVVPIVLRPCDWEATRFAGLQAVPRVGKVVRPVTAWSNVDEALLQVVHELRAVVTRLLATRA
>CP012670.1|AUX27378.1|10481342_10482509_+|uncharacterized-protein
MAGARMPSGSSPARTPSPIKSPRRAGLRPPVRALRRERPSTAVLALLLLSSALLLACASPARAAGSRAVATGRGRAPAAAAPRRPAAPARPVEVRVALSRGAAEEVAGVRLRRLLEIELPDGASLAAEPVGPLGDRVATVWIDRPTAARLEIQVRLDGRPVVRRQIAVAGLTSDVAARLLAIATSEMILAEMRRARAPRRPPAPRRPTPDEIELASRDLDALTVSAGPYAAVVSGGPRALGGAGVALGLRRLRFTEHLFARLLAAPPGGEALRWIEGGISGDYRIWLAASWRLSIGATASVASVRLPAAVAVDGIEGERDTWSARAGLGLGLETRLGGPLWLGLTLDPGVVLRPAPYEDAHGAARAVEGAWLGVGVSLTSERRASPPR
>CP012670.1|AUX27377.1|10478817_10481046_+|biotin-carboxylase
MITAVRTSSMPARTDAQALPPWKLVLPRGGYISSMEAFTTALGVPGFVLLDLGTLAGGADAHRLVGLRYLIANGEVWRTHFGWQRPLEAALRRQLADEARVAGLLSAAEGLLSRIRQARASLAPADRDGFAGYLEGGLLEALERRDFEDARFLKFLILEQDVPSLREQAAELLRARAGELHRGDPEVLDLLYAAVFRLDGYPATTVSAGRLKYILVADKGEMGVRATREAIALGKIPVVLYSLEDDANALQVRIAREGGGFAVGLKGNFRESYANYVQIADRVRAEFEERFGDGWQEELSRAGLYPGYGPLAENAAAIRHFRQKNIVFIGPMQDVVENAGDKRKFRLTAQEFDPEAVTPGIVIDSEDPDVIQRAILEAHAAGRFTFPGRLKAANGGGGRGQAVIPTADQVPQSIQKVLGEIRAYNWQPGVMFEQNIPETIHLEVQVLRDRYGNTRHLGMRDCSEQRASQKIQEEAPPALLRRYPGMEERICGLAVRIAERVGYVGAGTVELMFKEGKFYFLEMNTRIQVEHPVSEESYAIRRKRSRAPVNLVAWQMRIADGQAIDFEQQQVVQTHVSREFRINAESWNPDLRDSRDGGKGLFLPNAGIFDRIELPDVDAIREALADKGLSDLKIRFDCGFEEGDVLVNKDPTFGKLIVSVSGEDPERAYELLRLASIAVLRKMKIEGRQVRPDGTPIAGSPFRTNLQDHVRILKMPLLKRHANHDDTGRHVNWLVAAFRQEG
>CP012670.1|AUX27376.1|10477244_10478597_+|hypothetical-protein
MSRRGLPRIAPADLRDHATEERIARVWDRIEHDLQAREPQAPRRASVAALLAAATLTAFAGGLWVGRAVFREPQAAPAPLAVAKADDMPSLVDVFAAGSHARTFPLPGGGKIVLRPGTTVEVEQANGGALTLRLVQGEASVDTASAVRTAALAIVAGEARLSTSAGSVLRVRHNVDDIDVDVTDGAVKLTSPAGSRELGRGDAAAEVPIRRRAAAVAPPEEAPRPRVAVAPSSSSSSSSSSPPPRSSAAQAHVESPAASPPAPDWRARYNAGDVAEALRSLKQQPGGVDGAIASARTAKELMDLSDLLRDKSGDHSTGDDRGAAMRALTRVVEGFPSDANAQIAAYTLGNMYASMGDQALAAKYYEQARTLSPEGNLAEDSFCKRIRAEVVAGRKEEASVMAREYVATYPDGRCEDVRQLVSGEEASEEEEAEAEPEPPSEPALDASPAP
>CP012670.1|AUX27375.1|10476468_10477248_+|ECF-family-RNA-polymerase-sigma-factor
MSPRPQRARLRLVEPAAPAAPAAEALEDVGAVGPASAPEDRGRRDVQPGGARAEGSRRSVAPASGERGAGLTELPDAQLVILGARGDVSALEQLYRRHAAFAIHLATRIEGSARDVEDIVHDAFLRAFERLGDLVDPAAFRAWLGSIVVHKVRSRMRRARLLGLLGMGKSSEPVDLDALASPAASPHARAQIAQIYALLHTLPADDRIAWILRSVEGHELETVAQMCGCSLATVKRRISRAQQFLDGHFVDPTHNEVSP
>CP012670.1|AUX27374.1|10475946_10476177_-|uncharacterized-protein
MNKLVLALVAVSVSSLAVACGGAPAEPTDPSAAPTDPAAAPADPAAAPADPAAAPADPAAAPVDPAAAPADAAPAQ
>CP012670.1|AUX27373.1|10474418_10475513_-|hypothetical-protein
MDHSSRLSFVQRSGRRRPGFLPARALAWTVLAALTATGLGAGCGRSGVWDEVDPAYGVDPVDPGGPACGDGVCDGGESCESCSPDCGLCPTCGDGACDGAETCSSCASDCGPCPTCGDGACDGAESCGSCAADCGPCPTCGDGACAGAETCSSCPMDCGPCPGCGDGACGGAETCQTCPGDCGVCARCGDGVCSAPEDCLSCAPDCGACATCGNGVCNTPAEGCFTCPADCGPCGRCGDGVCSATETCASCQADCGVCSVCPNGVCESFETCAVCPADCGACEPADCREVLACTFACIDFGRTPPDFSIACVSNCVARGCANAQFFIDRVMTCTLASRPACGGDLACVRQRCSAEIAACVGATC
>CP012670.1|AUX27383.1|10489638_10490094_-|alkylhydroperoxidase
MQARMKNPAMILSEAMPAILEVYNATKQGGVPESTLELVHLRASQINGCGYCVYGGAMVARKAGVSDEKLFALAAWREAPWFTDAERAALALAEAATRLSDRADPVPDEIWNEAKRHYDERGLAALVLMVGVTNLFNRLNATTRQVAGPTW
>CP012670.1|AUX27384.1|10490308_10492030_+|DNA-polymerase-III
MHDKLDIARALREIALLLQLKGENPFKARAYDTGAQALEELTDDLGALVAEKKLTSVRGVGAALAGQIAELFQTGRSEQLEALRAELPPGVLELSQVPGMTLKRIKALHEALGIGSVEELKQACLTGKVRGVKGFGAKIEATLLEGIYRHETRDERVLLADALEVAEPLLAHVRGCEAAAQADLAGAIRRWEETVDRIDLVAAAEDPAAVTDCLARFPRVAAVDDRGASRCAVRFSGGLSGELLCVPPGDYAAALLHRTGAPAHVEALRALARGQGLSLDERGLLRGGERLPATTEEELYRHLGLPFIAPELREGEGEIEAAAARRAGERDDGLIEEADIQGMVHCHTVFSDGKNTIEEMALAAEVMGMKYLTITDHSPAAHYANGVGVDRLKRQWDEIARVQERVKVKLLRGTESDILESGALDYPDAILERFDIIIASIHSRMKMDADQMTRRLVNAMRLPVFKIWGHALGRLIQRREPFACRVEEVLDAVAGSRAAIEVNGDPHRLDMEPRWIKEARKRGIRFVISTDAHSTGGLHNLRFGVGTARRGGLRRGEVLNALGPDAFQQAVRP
>CP012670.1|AUX27385.1|10492377_10493268_+|hypothetical-protein
MLYVRHVPGPPLSAHVAELWYLSTAPPRAAERILPSGTLQLIVNLDEDELRVHDGPTIRRHSGAAVSGAYQSSFGVDTRAHVSMVGVHFRPGGAWPFLGAPPGALTDAHVDLADLWGHRAAELHDRLRAAPEPRARFALLERALLDRLSNARPGHPLVPRAIAALEGGERRVGDVAAMLGISHRRLVDVFTAEAGLAPKAFARITRFRRALSRAERERDPDWARLAAESGFCDQSHLIREFVALSGDSPTALIARSSRERVTLHHVAVAASAAPAASDGARGRGRQRARPRAALTR
>CP012670.1|AUX27386.1|10493504_10493912_+|hypothetical-protein
MTRTRSLSRVAAAVAALLGGVGVAAPAAAQGVIGPGSGRAGATVAVVVGLIGVGVGGLALARSAGRIDTGNGRGGAIVALVLGLIGMVLAGLHLATSPGGIGTGNGRGGAIVALVLGLIGMALGRLVLARSHRSG
>CP012670.1|AUX27387.1|10494179_10494836_-|uncharacterized-protein
MKITAVAWVLLLSSPATLGCGAEPFASPCADGGTCDPEPSAAPSEEECLEGLAALRVQAGCGVFASRSFGDDSNPGTMEKPVKTLARAVALAPRARGRVFACTDSYSESLTLRSGIDLWGGFVCWAGWPHYTEGSASGVVTLFTPNAGGPPITVVAAQDDGEGATDGVTTIVDMHVQQRRKVEPDRDSIALRLEPGAVVLPESRSPSPRVSGAPHHRT
>CP012670.1|AUX27388.1|10495266_10496664_+|cystathionine-beta-synthase
MTPMPSAGAAENVLSLIGNTPMVKVTQLDTGPCELFLKLENQNPGGSIKDRIGLSMIAAAERAGLLGGDRRHLIEATAGNTGLALALVAAQKGYRLTLVIPDKMSQEKIFHLKALGADVVMTRSDVEKGHPSYYQDLAASIAREEGAFYVNQFENPANPLAHETMTGPEIAAQLGGKLDAMVCGVGSGGTLTGLSRYFERAIPGCEMVLADPEGSVLAGYVRTGHLGKAGSWLVEGIGEDFLPSILDLSRVKHAYTIPDRESLETARALLSSAGILAGSSSGTLLAAALRYCREQSSPKRVCTLVCDSGNKYLSKMYNDFWMADQGFTDREPTGDLRDVITRRHAERAVVTVQPTDTLLVAYARMKLYDVSQLPVLQDGKVVGLVDESDLLLAAVDDVARFREPVASAMTTRLRTVDVRTPVRELLPMFDAGLVPIVTDGDEFVGLVTRIDLLNHLRRRVRLHEV
>CP012670.1|AUX27389.1|10496722_10497655_+|cyclase
MRAMHKAHGIGMSRRLSAGARRARAHALGPAAIALAACAPAAAPPAVSAPAAAPPAAAAQAEGAGQAAPAGLDLAAARIVDLTHPITPEMPLFPGNKPYAAETLSTVEKDAYYSSRFSMDEHAGTHVDAPAHFKAGAETVEQIAPEQLVGPAAVVDVTAKVTASPDHQVSVEDLKAWEARHGALGPKHIVLIRTGWGARWSDPVKYRNQDAQGVMHFPGVSVEASRYLRERGVRCIGIDTLSTDPGPSQAFDQHRAFLGAGGYHIENLANLEQLPEAGAFVVVAPLPLARGSGAPARVLALLPASGAPAR
>CP012670.1|AUX27390.1|10497658_10498510_-|hypothetical-protein
MYRISAADFAALAFVSLASCVTTQEEEDGFLGTAPTPLEYINALNPNALVPNALVPNALVPNALVPNALAPGALSPAALSAIQDPGAAGDLSRQFLSYVVGCALTPSQSFSFSWTDAGGTVHEEVYAGLIGLAPGWATKPLGQTEQQWVSACLGSRVNWYGASVIISSRASHAALDKTGSAELSTYTQQEGAFWGNLFDPSPYLHACYHEPNRDYARSMLRECAAGHLGAGGSVVECGLIHILGSCDSHCLPLNPSGQYYPTCVDNLTGPPDATTKVVTVFLQ
>CP012670.1|AUX27391.1|10499230_10500154_+|thioredoxin-reductase
MAPRNEVLPGYDVIIVGAGPAGLSAALILGRCRRRVLVCDSGQYRNAAAQAMHGFLSRDGIAPSELRRIGREQLAPYGVELREAAVSGVRAGARRFEVSLEGGERLVCRKLLLATGLVDRLPELAGLREMYGKSVHHCPYCDGWEARDQPIGVYGPGSTGVQLALTMKTWSDDVILFTDGPAPLSEAEEARLARHGVAVRRERIARLEGEDGWLSRVVLADGSAVERRSLFVKARQEQGADLAAKLRCEVTEERGVETAERHEETTTSGVFVAGDASRDVLLAIMAAAEGADAAFGINCALQEEDLA
>CP012670.1|AUX27392.1|10500181_10500643_-|hypothetical-protein
MTSRPPAPARWKPAAVLAAVFLFGGVAGAALGHGVTLHHLRATFRRPPAEARAQFRLEAMRRRLDLTDAQESEIEAILAEAELERERLLAECRPGLDALRDGTDARVKGVLTADQRAQYERFEAMRRRRPGPPDGPGHHHRGRGRGPGERRGD

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Crispr_ID: CP012670_49

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP012670_49

10702732-10702952

Orphan

Consensus_repeat	Method
GCAGATGCGCGTCGCCGCGGGCATTGGCGCGGCGGGGCATCGGCAGATGCGCGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP012670_49

>merge|CP012670|49|10702732-10702952|CRISPRCasFinder
GCAGATGCGCGTCGCCGCGGGCATTGGCGCGGCGGGGCATCGGCAGATGCGCGTCGCCGCGGGCATTGGCGCGGCGGGGCATCGGCAGATGCGCGTCGCCGCGGGCATTGGTGCGGCGGGGCATCGGCAGATGCGCGTTGCCGCGGGCATTGGCGCGGCGGGCATCGGCAGATGCGCGTCGCCGCCGGCATTGGCACGGCGGGGCATCGGAAGATGCGCGT

>CP012670|49|44|10702732-10702952|CRISPRCasFinder
GCAGATGCGCGTCGCCGCGGGCATTGGCGCGGCGGGGCATCGGCAGATGCGCGT	CGCCGCGGGCATTGGCGCGGCGGGGCATCGGCAGATGCGCGTCGCCGCGGGCATTGGTGCGGCGGGGCATCGGCAGATGCGCGTTGCCGCGGGCATTGGCGCGGCGGGCATCG
GCAGATGCGCGTCGCCGCCGGCATTGGCACGGCGGGGCATCGGAAGATGCGCGT

Protein	Signature genes	Signature genes Name	Protein_function
CP012670.1\|AUX27540.1\|10694704_10695391_+\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX27536.1\|10689792_10690728_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
CP012670.1\|AUX27537.1\|10690838_10691570_+\|3-oxoacyl-ACP-reductase	unknown	unknown	gnl\|CDD\|212491
CP012670.1\|AUX27548.1\|10705692_10705869_-\|uncharacterized-protein	unknown	unknown	unknown
CP012670.1\|AUX27539.1\|10692206_10694402_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|378255
CP012670.1\|AUX27541.1\|10695433_10696864_+\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|214473
CP012670.1\|AUX27535.1\|10688896_10689727_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379508
CP012670.1\|AUX27551.1\|10709735_10710017_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX27542.1\|10696895_10697825_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239486
CP012670.1\|AUX27545.1\|10703155_10704121_-\|uncharacterized-protein	unknown	unknown	gnl\|CDD\|237030
CP012670.1\|AUX27553.1\|10710501_10712874_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274542
CP012670.1\|AUX27538.1\|10691559_10691877_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377765
CP012670.1\|AUX27554.1\|10713369_10717296_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|162730
CP012670.1\|AUX27544.1\|10699879_10702549_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370755
CP012670.1\|AUX27546.1\|10704429_10704831_-\|type-VI-secretion-protein	unknown	unknown	gnl\|CDD\|372665
CP012670.1\|AUX27550.1\|10707006_10709667_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370755
CP012670.1\|AUX27547.1\|10704857_10705499_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371873
CP012670.1\|AUX27549.1\|10705945_10707010_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224276
CP012670.1\|AUX27552.1\|10710167_10710443_-\|hypothetical-protein	unknown	unknown	unknown
CP012670.1\|AUX27543.1\|10697957_10699466_-\|serine-protease	unknown	unknown	gnl\|CDD\|273938

Protein	Function_ID	Function_description	E-value
CP012670.1\|AUX27546.1\|10704429_10704831_-\|type-VI-secretion-protein	gnl\|CDD\|372665	pfam13665, DUF4150, Domain of unknown function (DUF4150).	2.75254e-37
CP012670.1\|AUX27536.1\|10689792_10690728_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	3.5949e-34
CP012670.1\|AUX27537.1\|10690838_10691570_+\|3-oxoacyl-ACP-reductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	2.1945e-71
CP012670.1\|AUX27553.1\|10710501_10712874_-\|hypothetical-protein	gnl\|CDD\|274542	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein. Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.	2.42421e-74
CP012670.1\|AUX27539.1\|10692206_10694402_+\|uncharacterized-protein	gnl\|CDD\|378255	pfam09826, Beta_propel, Beta propeller domain. Members of this family comprise secreted bacterial proteins containing C-terminal beta-propeller domain distantly related to WD-40 repeats. Jpred secondary-structure prediction shows family to be a series of 4 short beta-strands, characteristic of beta-propeller families.	1.74995e-149
CP012670.1\|AUX27541.1\|10695433_10696864_+\|uncharacterized-protein	gnl\|CDD\|214473	smart00020, Tryp_SPc, Trypsin-like serine protease. Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues.	1.09573e-13
CP012670.1\|AUX27535.1\|10688896_10689727_+\|hypothetical-protein	gnl\|CDD\|379508	pfam14219, DUF4328, Domain of unknown function (DUF4328). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 218 and 342 amino acids in length.	3.66941e-17
CP012670.1\|AUX27554.1\|10713369_10717296_+\|hypothetical-protein	gnl\|CDD\|162730	TIGR02148, ORFveg106_random, fibro-slime domain. This model represents a conserved region of about 90 amino acids, shared in at least 4 distinct large putative proteins from the slime mold Dictyostelium discoideum and 10 proteins from the rumen bacterium Fibrobacter succinogenes, and in no other species so far. We propose here the name fibro-slime domain.	7.72601e-16
CP012670.1\|AUX27542.1\|10696895_10697825_+\|hypothetical-protein	gnl\|CDD\|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	8.52898e-42
CP012670.1\|AUX27545.1\|10703155_10704121_-\|uncharacterized-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	9.57307e-07
CP012670.1\|AUX27538.1\|10691559_10691877_+\|hypothetical-protein	gnl\|CDD\|377765	pfam07045, DUF1330, Domain of unknown function (DUF1330). This family consists of several hypothetical bacterial proteins of around 90 residues in length. The function of this family is unknown.	3.36576e-10
CP012670.1\|AUX27544.1\|10699879_10702549_+\|hypothetical-protein	gnl\|CDD\|370755	pfam09937, DUF2169, Uncharacterized protein conserved in bacteria (DUF2169). This domain, found in various hypothetical prokaryotic proteins, has no known function.	1.42573e-55
CP012670.1\|AUX27550.1\|10707006_10709667_-\|hypothetical-protein	gnl\|CDD\|370755	pfam09937, DUF2169, Uncharacterized protein conserved in bacteria (DUF2169). This domain, found in various hypothetical prokaryotic proteins, has no known function.	2.0461e-93
CP012670.1\|AUX27547.1\|10704857_10705499_-\|hypothetical-protein	gnl\|CDD\|371873	pfam12059, DUF3540, Protein of unknown function (DUF3540). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 212 to 238 amino acids in length. This protein has a conserved SCL sequence motif.	2.59603e-66
CP012670.1\|AUX27549.1\|10705945_10707010_-\|hypothetical-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	1.02919e-24
CP012670.1\|AUX27543.1\|10697957_10699466_-\|serine-protease	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	1.9537e-169

>CP012670.1|AUX27544.1|10699879_10702549_+|hypothetical-protein
MRSSWPVDVVALNPVACGSVLWRTGGVLRVTVVVKATFSLGADGEAALSAPEPVQREDRYEEDDPSRSLRSASETAPYLPGAGVVLTGHAHAPPAGPVTALSARLALFRDALLLDKTIHVFGDPAPGSDGPGPFQRMPLVYERAQGGPGAPWNPVGIPDAGAGARADGWNRPPGPGAMRPNLVHPVSPHRPAGFGPIAPRWPLRRRLFGGLEARAAAPPAQHGSRGAAPTGAAEAEVLDIPEDFDFRAFNPAPFDQQIPFLQGDEWIVLDHLSDRRARVQVRLPSARARVRRYRVHGAGVGGFQEIALGADLLVLDADRQIASLVWRGSFAIERLEVLKDIRLFAGVETRTMTIAWPQPGDTAPPAHARGGPDRAALPDAVAPGSGAVSFFREQVTPRSPARATSLPRRNEPPFALVETGPLRRVETPVLPFRDTPAAPQAQPALAVRGETGPLDQRMPIPEDLLAQVGAERAQFPLAAPGTGASGGEPPIPGAPWSPVPAPPLIRPADRGCFQEPRTLVDGKRREGGAVVSVDLAPPIEVATPVEVAPPVEVAPPAEAVPPAEVAPPAEVATPAEVAPLAEVVLLAEVVLLADVPPVAPPVEMLPPAEVVPPAEAPPAEVVLLAEVAPPVEMLPPAEVVPPVEVPPAANLPLAGLEARKRAEAKLALGGDLDGDDLSGGDLSGLDFSGRSLARCSLRGANLRGARLAGATLVEAALEEADLRGADLSRAVLAKARADRAELVEAVLEEADLRGASLRGANLERARLARACGDGASLTSANLSGADLEEARFVGATLVGANLREARADRADFASARLDRADLGGASFRKARLASAVLAHARLDLTDLRGADLEGANVHGAARRRAKIAGANMKDLDETAPVSPEDPERS
>CP012670.1|AUX27543.1|10697957_10699466_-|serine-protease
MQARWALPLAALITLPLGCRDRGESPLRREQVAEATPRPGAPPPSPGPLQVPPSTREAVSFQEGFAPIVERVSAAVVNVSSVRFVRPPSPERVPFFSNPFFHEFFGPEWGGGPPSGPRVQREQSLGSGVIVSREGHVLTNAHVVEGASQVRVTVPGRPEVKASVVGVDAKTDVAVLKLDGGEFAFAAFGDSEAARVGDFALAIGNPFGIGQTVTLGIISAVGRGNMGIVDYEDFLQTDAAINPGNSGGALINMAGELIGINTAILARGAQGNQGIGFAVPSKLARAVMEQILEHGRVIRGALGVAIQDASPPLVEALGLPKDTRGAVVSDVAEGSAAEEAGLRRGDVIVAMNGEHLVDGRDLRMRVAETKPGTRVTLRVLRDGKSLELAATLDELPEPKREAPAAGPAPSSALGIEIAPLSDEARRRLEIPGEVRGALVVGLSPDSPAGRAGLLPGDVIVEVNQKPVAGPEQVKQAVEAAGKRPVLLVAWREGRTRFVLVER
>CP012670.1|AUX27542.1|10696895_10697825_+|hypothetical-protein
MQALDLPAEQIAAAVGARPFILLALMVISAVGALLGLVVVARLAERHARALWGRGVRAFAALAAHPATRRLSARFPAVARQLRELSAAEYLVIHLGLGLALSAAALVFVALAEGVNGGESIVHIDLALARALHASSSRAGVAALRAVTHLGSGAVLTVVALVVAAALIWRRRRVLAVGWLIALAGGGLLNLALKALFARPRPAFADPHAVAEGWSFPSGHAMGTFITFGMLSYLGVLFVRTLRARLAILALALAWTVAMGFSRMYLGVHYLSDVLAGFAAGTVWLAACISGIEVARRRPSGAGERPLPT
>CP012670.1|AUX27541.1|10695433_10696864_+|uncharacterized-protein
MTARMARGPLAAALLLLPALSCAPADGPAPPELAGARQRVTNGTPAISDAAVVGVARGGVVGCTGVLIHPRVVLTAAHCLAGDPPDTVLVGLSAAEGVHVDVVRAWSSPEYRSGVADHDLGALLLREPLDIAPVPASARPLSGDDAGRIVRIVGFGREDPDARGGEARRMQGTAALGELSALTFSLSPSPSGACGGDSGGPVLGSAAAEGEEVLLGIISRGDDACAERASAVRVDAHLGGFIAPLLAVIDGTAGQVGERCVEPGNCASGLCVAPEDAPSFAYCSRPCERSADCPAGMRCDGDEEGRPQCRYAGPSPGAIGAACDRHEACELGLCALFRGEAGPTCSALCFPEDREPCPHGGVCAPAVGTPVHGCKYEAPPPLEAVGGCSAGRPLPATGAAPHGLAPIAGGALLLGLRALGLRAVGLRAVGLRAVGLRAVGLRAVGLRAVGLRAVGLRALRRGRTQARRPGSLTIRA
>CP012670.1|AUX27540.1|10694704_10695391_+|uncharacterized-protein
MGRVLLRLGAFAAVGVLSFVGCSVDSSTELAGDSQLEDGAASLTMDLDGSVAHAVRLDASRVRVDIYDRAGTPQFSADFRVPQGQTPTVEWTYLHPATADAPAPEATTGSMEVELEQLPSLEGAITGAAVIQAQVSRVISGEEYDNWGCDLLPGQYNWIVSCGTKGACCDVHDACFATYGCTAGSWTNPGSEPWQCSVLCNASAVACFTTLNPGPSACCWRGNCGQPR
>CP012670.1|AUX27539.1|10692206_10694402_+|uncharacterized-protein
MRSHPETYTLLALLAVGCGVAACSLRAGEPTPAPGPTPTPAARVISALTPARGCEDVEALLRERLKQTMIASVDRMRSNALRSLANGCAPPSLEGGIGAAAGGAGTGGGVIPAPADEASGGGGEAAAAYSTTNTQEAGVDEADFIKNDGEHIYLLAHGELQIVDAWPAADAHRVASVPIRGVPRKLFVHGERALVYSSLVPAQNDFIVEASGTECAYGYDCELTGDGAPLLVTELDLGDLAAPVVTRTLEFSGSFINARRVGDVVHTVVSSPEPVLASLRSWPEGLSLCAMAEGGLSPAAEQTVSDAFDALIEENLALIDAASFEDMMPTVRDTPYRDGVAQPRRADPFAGCDGYYLSNTGDGHRFLSVVSTELGGEGIGQVTIVGKPGVVYATSTSLYVASRHQYGQTSGWFYDDGAKTPDATTIHEFALSDSASPSAYLGSGVVKGRVLNQLALSEHDGYLRVATTTGRLPDPDTHNTVASLKQEGGALVVKGMVDHLARGEDIRSARFYGDVGFVVTFKKTDPLFTLDLSDPGSPKVRGELEIPGFSTYMHMIDEGHLMSIGYDADDQGDFAWFQGVMLQIFDVTDLDAPRLAHKEVIGTRGSASDAATNHLAFNYFAQRGLLGIPMVVCEGGSGGASGDTMTFSGLLVYEVDVGGGFTPVGGVPHPLPDTSSSPVNAGCRSWWTDARSFVKRSVFMEDHVYSVSEDEIRVAHLGDLETPAAVVSLTP
>CP012670.1|AUX27538.1|10691559_10691877_+|hypothetical-protein
MGAEGRKHVLLMGLQVTDEATYAGYRARMTPILSSYGGAFGHDFIVARVLKGDARINRVFTILFPDRAARERFFADPEYRAARAELFEPSVSTAIVLGELEADVA
>CP012670.1|AUX27537.1|10690838_10691570_+|3-oxoacyl-ACP-reductase
MSNRIDRVVITGASSGIGLDLARRFLAEGSRLIVNGRDPEKLDRARRSLEGGARVVAVPGHVGDRATARAVAAAAQEHLGGVDVLINNAGIFGVKPFLESTEEDLERFFTTNLKGTFLMTQAVVPLMIEGGGGSILNVGTVLVQQAMTGMPASAAMASKGGVHALTVSLAAELARHNIRVNTLAPGIIRTPLIGEGADSMASIHPLRRIGEVRDTTDAALFLARAGFVTGTTLDVDGGYSHGR
>CP012670.1|AUX27536.1|10689792_10690728_-|LysR-family-transcriptional-regulator
MTYDQLIAFLAVAGEGSFSAASARLHKSQPAVSKLVRNLESELGVELFDRREYRATLTDAGRLFHERASVVVEGTEALRSFGMQLSGKVEPIVRLAVDAVTPLGPIMDVFRGVQARYASVRLELGTERLAGAADALRERRADLAVATRLGIDPSEVETARFCDVRVLPVARFDHPVATCGTPIPPALLRAHAQIVLRDSARGGASPSLNVLEGGLRWTVTDVAAKKEVILAGMGWGGLPEHVAADALASGELVTLQVPEFEADVMELFVTRRRDRPHGVVAQALWEALRRGGRDAGAPTAAGKARRRRRKG
>CP012670.1|AUX27535.1|10688896_10689727_+|hypothetical-protein
MRGWDEAREGWDRDVRVARARARAAIIALIAMAALSGFAGLVGAWHIVLLRLTDVPAPTWALANTLREIGGLSELVLVPVTGVLFLRWLSRAVAVTDALGIDRGFPWTPFQAVTAFFIPFVNVVRPYSVLRDLHDHLAPDGVPEPAPRPLLDGAGGYRRVEMVHAPRAGAVHHGAIGAWWGLYLASGWLALLASRMRAQTVAEFIQARTAFIASDVVSLLAALLAVLMVRAIDSRLAERHRRTRHASDEELDGRLVERDRRLREDFAKLPGLGSLQ
>CP012670.1|AUX27545.1|10703155_10704121_-|uncharacterized-protein
MNPEPKRMNDLFAEAKPALLELPSESLVQPRVSRERALQLTTVLRQEFAPLVPSLSEELGPARARRRKADFEALEPRALVFYAADLAVDVPWTSTQKERRAALARKVREHDELLSAWAVPLFRKDDEASAIVADILRGKGIRDDAEDTVRLVALFRKHWAAARGQTPIKQSTLDEAEADATELLGLLDAGAASAKGSPRDLRQRAYTHWRNAYLEIYHLGRYLTRHDPAAIERFPAVAAERTAAPAERDAAQPERPAAQPERPAAPTERDAAQPERPAAQAGRPAAQAERNATTPAAPPEKPARPASAPAETLIDDSIDPA
>CP012670.1|AUX27546.1|10704429_10704831_-|type-VI-secretion-protein
MLAKSSAGGLCMAFPDVCLTPAPPSPSPVPVPYPNVGLDPTNTGFVPHVLLTCAPAHNMSSQPPLTNGDNAGVAMGVASGTVMGPARTVTAAFTVVVGGMPLARLTSITVQNSTNAPGAKIVPSATNVLVLAP
>CP012670.1|AUX27547.1|10704857_10705499_-|hypothetical-protein
MTAAKKLARPETYLEAGRVERVGEAVVVRLASGSFEARRAKSCLVAPEAGDKVLCAVEPEGVYLLAVLEGRGGAPTKLATDGDLEVQARGGRVAVCASERVDIVGAREVAVTGAEVHVRARKGSVAIEELGFFGRLVQAEVARVALVAQEVDSRLTRLTQRVKRVFRFVEELDQTRAGTVDLRAESLLGLRGENAVISARVLAKIDGEQIHIG
>CP012670.1|AUX27548.1|10705692_10705869_-|uncharacterized-protein
MKTSGTCPKCQCTVLWYIADVAANEDTGYLEQQPTFQLAVIGDGRKGRAGKTEAYACQ
>CP012670.1|AUX27549.1|10705945_10707010_-|hypothetical-protein
MTRDELLDKLRHGEPVRHVDLSHLALDGADLSGASFEEVRFPAALRAALLKESSFIACDLSGCDLGDADLRHASFYRSQLTGTRFDGGRHIAAGFVECDADGASFTRVEAPIATWAKTSLRGASFAGANLDRANLIEIDADRTSFAGANLEKATLYRADLRTADLAGANLALTTLVEAKLGPKRFADTKLFRTQLMKSDLAGASFADADCAQCNFMGADLRGATFAAARAPQCYFGEARLDGAKLTNGDFRQAIFEKAELLQADLSGAVLEEAYFGHARASGARFSGARLREADFCYADVTGADFEDAGLYRTKFHRAKREGAALRGALLAGWLGDDEELARAESWQPTRGAAR
>CP012670.1|AUX27550.1|10707006_10709667_-|hypothetical-protein
MKIAKPMKVPMLTRVLELQRRSYFHVTAMLGFPLTCPRALVDELSFWRLVTGALGEQGAIDEGFAKSRGELLVAGSFHAPGGVPTPASYVRARVGSVDKRLAVVGDRTWRDGVPTEPAPMTTLRIDWAHAFGGAGYDRNPHGKGHRPLDLGDRSVHPLPNVEQYGEMIRAPSERPEPAGFLPMDITFAQRRRRAGTYDKRWLDEHFPGLPSDTDPTFFNVAPEDQWLDGLFRGDEEILIENMHPEKPRLEGRLPDLVTRSFVTHRTPEGDRFLEIPMRPDTVWLFPAEELCVLLFHGVLAIAEDDAADIVHLLCACEEPGSPRPIEHYQAALARRLDKDKGAVAEISDSDLMPPRASGVAPNIDLGDMGRWVKSEYLVAQNMRRGQERSFAEARARVEAEGLDPKDYGLAELPPLPEPPPDDLDALAAYVEAASLKTEELMEQARASEAQAREEARRAWAEMGEDFDAAMEKAAKEGAGPPKFSASAHLAMLRAAAAEAREAGVVLTDVEQMLADPGYHAQIEEQERGLFEMYRRMGHLQPAAAAMEPEASERARVVIGLALEVGEPLANRDFTGANLSGMRLSGVDLSGAFLESADLSGCDLSRANLEGAVLARANLAGTDLSEARLRGANLGGAALRGANLERADLTEAVLSRAELEGARFSGANLTGADWIEAKLSGADFTGATLGECNLLKVDLTGARFAGADLSGANLVESTLDGADFSNAALRKTTFVACRGERVSFRGARFQQGVVVHGSSFPEADFSDADMERANLRGTALTDARLDRANLRGADLSGCDASGASLERAVLKGGLLIRTDLENASLQGANLMDALASKARLAGADFTGANLFRADLSRVAGDERTTFAEAEVGHVRFLPKAHVTGGAS
>CP012670.1|AUX27551.1|10709735_10710017_-|hypothetical-protein
MKTTGTCPKCLCTTLWYVERVANNDPCPPAGDTSYEFQLAVTGKFHLDGAAGKLEAYACQQCGYVELYLKERLPADGKYIRELRRPQGPPYRG
>CP012670.1|AUX27552.1|10710167_10710443_-|hypothetical-protein
MKRTGICPKCQHNVLWYVENVAANEEAGLMQQHPTFQLAVTGNGSYGRAGSTEAYVCQQCGYIELYLKERLTADGKHVRELRGSRGAPYRG
>CP012670.1|AUX27553.1|10710501_10712874_-|hypothetical-protein
MSADVLSMQCASLPTARVMGFKGTEALCRPFEIEVLFTVPTGTDVRGAVAAPATLALQRGGDAPPMCWHGVFVRLRLLRESADRALYLGALVPRLWLQRHSVRSFVHTKKKVDAFVTETLLHGGLAASDLRFSVDVDRYPEEEFVCQYRESHLDFIHRWLEREGLYYYFEHPVDDGSVEIMVVVDSKEQHEPLSGRGRVRYHPTSGNDVSAGECFREVHVDFSSLPAAVHINDYNYANPSAPVSGEHPVSRSGRGEVREYGYRVFTQDEAARLAQVKAQSIACRELTLHATGNATGLRAGYVFELEDGPSDLPTRYLAVEVRHAAAIMGGSFDVARTTGLDQGETYRVEVVAIPADVQFRAPQSTPWPRIYGFENGVVDGPSDSQYAQIDDQGRYLVRFKFDASDLPDGATSTYLRMMQPHGGSVEGWHFPLRKGTEVMVSFQGGDPDRPVIAGVVPNMHRPSTVTSRNLTQNVLRTGGKNHMVVEDLEGKQHIDLYTPVGGTNVHMGGPTHQAFIAPPLTPDANPTIQAVDCMFYVYTDGNAGFNVCGEWWQNVGGKLRLDVSDDATIHYVGIHTLNVDGDSNEFYNSHQNIKVRSGRTDTVEAGGMTQNIHGGLTQTIEPGGKQEVTGGWVHKVTALNHDDYGEWKTDVGKGWTADIKGAWAHTVTGDITIESRSGTILVKSPTKITLDAPEVTITAPAKAYKHTNFLFETFYMKESFGAQKMDITAINMSANGLKVEATRYSAGYVGFKGETITGGKKDTASFVWSTLGSHILAAGLNIYNANFTKI
>CP012670.1|AUX27554.1|10713369_10717296_+|hypothetical-protein
MALRTSYLALVVGLLQVTAACGGGDPSSPTTSGTGPGGGGTAGSGGTGDGSGGAGGVPELGGVGGFDGLGGSGGEEPDPCAVEDAPPDCYLPPDPACGDGVINQETEVCDDGNTLPGDGCSGQCQVEPYWRCPTPGQRCELTIACGDGELHPGEFCDDGNTADGDGCSADCLHVDPSYVCRTPGEPCILLYRCGDGRVNGSEECEDGQDPPVSGDGCSAECKREPGFQCSTPNQPCSKLPVCGNGVREGGERCDDGNTTSGDGCSSLCRQEPYYNCATPGQPCERLIECGDGVVQPGELCDDGNAADGDGCSADCKVRDQAYVCPEPGEPCILIYKCGDGRVNGTERCDDGQDPPQSGDGCSAECQLEEGWVCRPNQPCTRKTFCGDGAVQAGEQCDDGNTAGDDGCTAQCRIVAGWTCPPSGGPCTPPAPPVCGDGVIGGDEVCDDGQPPAGGDGCSANCQTIEPGWDCSRVGFPCKAVCGDGLLRGNEQCDDGDVFSGDGCDASCRIEPGRVCDDGEPQDCTGFSACGNGIREGTEVCDDGNGNWRDGCTPDCKGEPDCAAGACTSRCGDGILLPGDPNERCDDGNTESGDGCSADCQVEDGYVCTTQRTEMRLPMVLRDFIGYCPTDNTFSATANSACDADQSANPRGHLDFEIAPSGNRTQVDGTVLSTLDDDGKPVNAHGAGPLTPSATNGWTTGQTNFQWWYRDNPNFNRTLFTTIELDEVNPGTFVYERNPFWPLDLNPPAPDTALESLVSAGLERTQAGDGGQHNFYFTSEVRYWFQFNSDNDAANDPVLTFYGDDDVWVFIKNTLTADIGGIHGQLQESVTILDDGTAQVTPCTQGSCPDRTPYIVDLDLEHGRVYEIAVFQAERHVTGSNYQLTLAGFSAGTSVCTPQCGVDPPVVTLGEECDDGSRNGSGYGQCNDCQLGPYCGDGVRNGPEECDNGVNNSMYANASGACAPGCVLPAQCGDGQVNAPYEACDLGAGNTPDGYGGCTTSCEIGPRCGDGIVNGSEQCDDGANDGFYGTCNPDCTNAPRCGDRRVDPEWGEECDDPDDPNCSSCQLGTLCGDSVTQPEYGEECDDGVNDGGYGECGPMCLHGPRCGDGVVQPDDEACDLGEAQNTGEYNGCNEDCSYGPYCGDGRVNGTETCDDGVNDGFYGSCFPDCTPAAQCGDGRVDEDWGEQCDPPNEAAGCSDNCRLGAQCGDGVVQAGEQCDDGVNDGGYGECGPSCQVGARCGDGVVNGPEQCDDGDGGNTGGYGKCAPGCVYGPYCGDGRLQAIYEECDDGNDKNRDGCSTACEFDNVPR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP012670_2	2.2\|356802\|40\|CP012670\|CRISPRCasFinder	356802-356841	40	CP012670.1	481590-481629	0	1.0
CP012670_13	13.1\|1630950\|33\|CP012670\|CRISPRCasFinder	1630950-1630982	33	CP012670.1	2418005-2418037	0	1.0
CP012670_26	26.2\|4730540\|19\|CP012670\|CRISPRCasFinder	4730540-4730558	19	CP012670.1	4730582-4730600	0	1.0
CP012670_34	34.1\|6212194\|16\|CP012670\|CRISPRCasFinder	6212194-6212209	16	CP012670.1	338-353	0	1.0
CP012670_34	34.1\|6212194\|16\|CP012670\|CRISPRCasFinder	6212194-6212209	16	CP012670.1	1233310-1233325	0	1.0
CP012670_34	34.1\|6212194\|16\|CP012670\|CRISPRCasFinder	6212194-6212209	16	CP012670.1	2771472-2771487	0	1.0
CP012670_34	34.1\|6212194\|16\|CP012670\|CRISPRCasFinder	6212194-6212209	16	CP012670.1	4577610-4577625	0	1.0
CP012670_34	34.1\|6212194\|16\|CP012670\|CRISPRCasFinder	6212194-6212209	16	CP012670.1	5318269-5318284	0	1.0
CP012670_34	34.1\|6212194\|16\|CP012670\|CRISPRCasFinder	6212194-6212209	16	CP012670.1	6212224-6212239	0	1.0
CP012670_34	34.1\|6212194\|16\|CP012670\|CRISPRCasFinder	6212194-6212209	16	CP012670.1	6212239-6212254	0	1.0
CP012670_34	34.1\|6212194\|16\|CP012670\|CRISPRCasFinder	6212194-6212209	16	CP012670.1	8299949-8299964	0	1.0
CP012670_1	1.1\|122964\|31\|CP012670\|CRISPRCasFinder	122964-122994	31	CP012670.1	3870011-3870041	1	0.968
CP012670_22	22.1\|3586556\|18\|CP012670\|CRT	3586556-3586573	18	CP012670.1	4141343-4141360	1	0.944
CP012670_22	22.1\|3586556\|18\|CP012670\|CRT	3586556-3586573	18	CP012670.1	6711500-6711517	1	0.944
CP012670_39	39.1\|7664025\|19\|CP012670\|CRISPRCasFinder	7664025-7664043	19	CP012670.1	7664074-7664092	1	0.947
CP012670_1	1.1\|122964\|31\|CP012670\|CRISPRCasFinder	122964-122994	31	CP012670.1	3048113-3048143	2	0.935

1. spacer 2.2|356802|40|CP012670|CRISPRCasFinder matches to position: 481590-481629, mismatch: 0, identity: 1.0

ccacgacgaagcccgcgtcgtcgtggacggcgaccacgtt	CRISPR spacer
ccacgacgaagcccgcgtcgtcgtggacggcgaccacgtt	Protospacer
****************************************

2. spacer 13.1|1630950|33|CP012670|CRISPRCasFinder matches to position: 2418005-2418037, mismatch: 0, identity: 1.0

tacatgaaggcggggaggcgggaaggggtgatt	CRISPR spacer
tacatgaaggcggggaggcgggaaggggtgatt	Protospacer
*********************************

3. spacer 26.2|4730540|19|CP012670|CRISPRCasFinder matches to position: 4730582-4730600, mismatch: 0, identity: 1.0

cccgggcgaggcggcctgt	CRISPR spacer
cccgggcgaggcggcctgt	Protospacer
*******************

4. spacer 34.1|6212194|16|CP012670|CRISPRCasFinder matches to position: 338-353, mismatch: 0, identity: 1.0

ggcggcggggcgggcg	CRISPR spacer
ggcggcggggcgggcg	Protospacer
****************

5. spacer 34.1|6212194|16|CP012670|CRISPRCasFinder matches to position: 1233310-1233325, mismatch: 0, identity: 1.0

ggcggcggggcgggcg	CRISPR spacer
ggcggcggggcgggcg	Protospacer
****************

6. spacer 34.1|6212194|16|CP012670|CRISPRCasFinder matches to position: 2771472-2771487, mismatch: 0, identity: 1.0

ggcggcggggcgggcg	CRISPR spacer
ggcggcggggcgggcg	Protospacer
****************

7. spacer 34.1|6212194|16|CP012670|CRISPRCasFinder matches to position: 4577610-4577625, mismatch: 0, identity: 1.0

ggcggcggggcgggcg	CRISPR spacer
ggcggcggggcgggcg	Protospacer
****************

8. spacer 34.1|6212194|16|CP012670|CRISPRCasFinder matches to position: 5318269-5318284, mismatch: 0, identity: 1.0

ggcggcggggcgggcg	CRISPR spacer
ggcggcggggcgggcg	Protospacer
****************

9. spacer 34.1|6212194|16|CP012670|CRISPRCasFinder matches to position: 6212224-6212239, mismatch: 0, identity: 1.0

ggcggcggggcgggcg	CRISPR spacer
ggcggcggggcgggcg	Protospacer
****************

10. spacer 34.1|6212194|16|CP012670|CRISPRCasFinder matches to position: 6212239-6212254, mismatch: 0, identity: 1.0

ggcggcggggcgggcg	CRISPR spacer
ggcggcggggcgggcg	Protospacer
****************

11. spacer 34.1|6212194|16|CP012670|CRISPRCasFinder matches to position: 8299949-8299964, mismatch: 0, identity: 1.0

ggcggcggggcgggcg	CRISPR spacer
ggcggcggggcgggcg	Protospacer
****************

12. spacer 1.1|122964|31|CP012670|CRISPRCasFinder matches to position: 3870011-3870041, mismatch: 1, identity: 0.968

tgcagtacagggagacggatctccagttcgc	CRISPR spacer
tgcagtacaaggagacggatctccagttcgc	Protospacer
*********.*********************

13. spacer 22.1|3586556|18|CP012670|CRT matches to position: 4141343-4141360, mismatch: 1, identity: 0.944

gccgtcaccggagccgcc	CRISPR spacer
gccttcaccggagccgcc	Protospacer
*** **************

14. spacer 22.1|3586556|18|CP012670|CRT matches to position: 6711500-6711517, mismatch: 1, identity: 0.944

gccgtcaccggagccgcc	CRISPR spacer
gccgtcgccggagccgcc	Protospacer
******.***********

15. spacer 39.1|7664025|19|CP012670|CRISPRCasFinder matches to position: 7664074-7664092, mismatch: 1, identity: 0.947

ggtcgtggccggctgacgt	CRISPR spacer
ggtcgtcgccggctgacgt	Protospacer
****** ************

16. spacer 1.1|122964|31|CP012670|CRISPRCasFinder matches to position: 3048113-3048143, mismatch: 2, identity: 0.935

tgcagtacagggagacggatctccagttcgc	CRISPR spacer
tgcagtacagggagaccgacctccagttcgc	Protospacer
**************** **.***********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP012670_32	32.1\|6047683\|22\|CP012670\|CRISPRCasFinder	6047683-6047704	22	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	1059142-1059163	2	0.909
CP012670_41	41.3\|8683523\|22\|CP012670\|CRT	8683523-8683544	22	NZ_LN832562	Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence	697756-697777	2	0.909
CP012670_21	21.1\|3388220\|29\|CP012670\|CRISPRCasFinder	3388220-3388248	29	KT281796	Mycobacterium phage Zakhe101, complete genome	37002-37030	3	0.897
CP012670_21	21.1\|3388220\|29\|CP012670\|CRISPRCasFinder	3388220-3388248	29	NC_022325	Mycobacterium phage Dylan, complete genome	36998-37026	3	0.897
CP012670_8	8.2\|590513\|29\|CP012670\|CRT	590513-590541	29	NZ_CP030772	Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence	575386-575414	4	0.862
CP012670_10	10.1\|831630\|27\|CP012670\|CRISPRCasFinder	831630-831656	27	NZ_CP020399	Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence	261688-261714	4	0.852
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP025513	Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence	263387-263416	4	0.867
CP012670_10	10.1\|831630\|27\|CP012670\|CRISPRCasFinder	831630-831656	27	NZ_CP019603	Croceicoccus marinus strain E4A9 plasmid pCME4A9I, complete sequence	404444-404470	5	0.815
CP012670_10	10.1\|831630\|27\|CP012670\|CRISPRCasFinder	831630-831656	27	NC_023286	Streptomyces sp. F12 plasmid pFRL6, complete sequence	252434-252460	5	0.815
CP012670_10	10.1\|831630\|27\|CP012670\|CRISPRCasFinder	831630-831656	27	KM879463	Arthrobacter phage vB_ArtM-ArV1, complete genome	49396-49422	5	0.815
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_AP022566	Mycolicibacterium alvei strain JCM 12272 plasmid pJCM12272, complete sequence	140216-140246	5	0.839
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	KX683428	Mycobacterium phage TBond007, complete genome	48058-48088	5	0.839
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	KR080206	Mycobacterium phage ShedlockHolmes, complete genome	48572-48602	5	0.839
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NC_042325	Mycobacterium virus Pixie, complete genome	48059-48089	5	0.839
CP012670_21	21.1\|3388220\|29\|CP012670\|CRISPRCasFinder	3388220-3388248	29	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1168317-1168345	5	0.828
CP012670_21	21.1\|3388220\|29\|CP012670\|CRISPRCasFinder	3388220-3388248	29	NZ_CP019037	Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence	442641-442669	5	0.828
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	CP054921	Streptomyces sp. NA03103 plasmid unnamed1, complete sequence	9745-9774	5	0.833
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	93481-93510	5	0.833
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_LR134459	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 17, complete sequence	135706-135735	5	0.833
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	93481-93510	5	0.833
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	59576-59605	5	0.833
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	48983-49012	5	0.833
CP012670_6	6.4\|420633\|36\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	420633-420668	36	LN997843	Streptomyces reticuli genome assembly TUE45, plasmid : II	245098-245133	6	0.833
CP012670_16	16.5\|1641627\|36\|CP012670\|PILER-CR	1641627-1641662	36	NZ_CP027671	Simplicispira suum strain SC1-8 plasmid unnamed2, complete sequence	16466-16501	6	0.833
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP016463	Bosea sp. RAC05 plasmid pBSY19_1, complete sequence	351269-351299	6	0.806
CP012670_21	21.1\|3388220\|29\|CP012670\|CRISPRCasFinder	3388220-3388248	29	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	424556-424584	6	0.793
CP012670_21	21.1\|3388220\|29\|CP012670\|CRISPRCasFinder	3388220-3388248	29	NZ_CP033971	Cupriavidus pauculus strain FDAARGOS_614 plasmid unnamed2, complete sequence	173605-173633	6	0.793
CP012670_21	21.1\|3388220\|29\|CP012670\|CRISPRCasFinder	3388220-3388248	29	NZ_LR134452	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 10, complete sequence	235989-236017	6	0.793
CP012670_21	21.1\|3388220\|29\|CP012670\|CRISPRCasFinder	3388220-3388248	29	NZ_CP011665	Streptomyces sp. Mg1 plasmid pSMg1-1, complete sequence	237593-237621	6	0.793
CP012670_21	21.1\|3388220\|29\|CP012670\|CRISPRCasFinder	3388220-3388248	29	NZ_CP033582	Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence	450764-450792	6	0.793
CP012670_21	21.1\|3388220\|29\|CP012670\|CRISPRCasFinder	3388220-3388248	29	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	360095-360123	6	0.793
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP027299	Streptomyces sp. SGAir0924 plasmid unnamed_5	84675-84704	6	0.8
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	1792720-1792749	6	0.8
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	1498694-1498723	6	0.8
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP025613	Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence	491202-491231	6	0.8
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP030761	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence	790796-790825	6	0.8
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	624950-624979	6	0.8
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1188123-1188152	6	0.8
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	537941-537970	6	0.8
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP023712	Rhodococcus ruber strain YC-YT1 plasmid unnamed1, complete sequence	49366-49395	6	0.8
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	LN997843	Streptomyces reticuli genome assembly TUE45, plasmid : II	24704-24733	6	0.8
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	MK305888	Streptomyces phage Austintatious, complete genome	10962-10991	6	0.8
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	KY092481	Streptomyces phage PapayaSalad, complete genome	10968-10997	6	0.8
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_LR134459	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 17, complete sequence	111903-111932	6	0.8
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	CP000876	Herpetosiphon aurantiacus DSM 785 plasmid pHAU01, complete sequence	78721-78750	6	0.8
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP029356	Azospirillum sp. CFH 70021 plasmid unnamed1	739286-739315	6	0.8
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP033582	Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence	213616-213645	6	0.8
CP012670_3	3.21\|401068\|36\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	401068-401103	36	NZ_CP042824	Rhizobium sp. WL3 plasmid unnamed1, complete sequence	48600-48635	7	0.806
CP012670_3	3.21\|401068\|36\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	401068-401103	36	NZ_CP039905	Agrobacterium tumefaciens strain CFBP6623 plasmid pAtCFBP6623a, complete sequence	199366-199401	7	0.806
CP012670_3	3.21\|401068\|36\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	401068-401103	36	NZ_CP039909	Agrobacterium tumefaciens strain CFBP6624 plasmid pAtCFBP6624, complete sequence	139214-139249	7	0.806
CP012670_3	3.21\|401068\|36\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	401068-401103	36	NZ_LS974446	Rhizobium selenitireducens ATCC BAA-1503 isolate T2.30D-1.1_plasmid plasmid 1, complete sequence	38359-38394	7	0.806
CP012670_6	6.19\|421719\|36\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	421719-421754	36	NC_017957	Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence	74465-74500	7	0.806
CP012670_8	8.2\|590513\|29\|CP012670\|CRT	590513-590541	29	NZ_CP046321	Gordonia bronchialis strain FDAARGOS_676 plasmid unnamed1, complete sequence	42707-42735	7	0.759
CP012670_8	8.2\|590513\|29\|CP012670\|CRT	590513-590541	29	NC_013442	Gordonia bronchialis DSM 43247 plasmid pGBRO01, complete sequence	38460-38488	7	0.759
CP012670_16	16.7\|1641625\|38\|CP012670\|CRISPRCasFinder	1641625-1641662	38	NZ_CP027671	Simplicispira suum strain SC1-8 plasmid unnamed2, complete sequence	16466-16503	7	0.816
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1361658-1361688	7	0.774
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1346790-1346820	7	0.774
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1361800-1361830	7	0.774
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1361781-1361811	7	0.774
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1361767-1361797	7	0.774
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP009439	Streptomyces glaucescens strain GLA.O plasmid pSglau1, complete sequence	65268-65298	7	0.774
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP032053	Streptomyces clavuligerus strain F1D-5 plasmid pSCL2, complete sequence	93782-93812	7	0.774
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1389438-1389468	7	0.774
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	591209-591239	7	0.774
CP012670_21	21.1\|3388220\|29\|CP012670\|CRISPRCasFinder	3388220-3388248	29	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1179948-1179976	7	0.759
CP012670_21	21.1\|3388220\|29\|CP012670\|CRISPRCasFinder	3388220-3388248	29	NZ_CP024427	Paracoccus yeei strain TT13 plasmid pTT13-5, complete sequence	83086-83114	7	0.759
CP012670_21	21.1\|3388220\|29\|CP012670\|CRISPRCasFinder	3388220-3388248	29	NZ_CP020443	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed3, complete sequence	93004-93032	7	0.759
CP012670_21	21.1\|3388220\|29\|CP012670\|CRISPRCasFinder	3388220-3388248	29	NZ_CP044079	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed2, complete sequence	212178-212206	7	0.759
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP027299	Streptomyces sp. SGAir0924 plasmid unnamed_5	284152-284181	7	0.767
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	716784-716813	7	0.767
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP035002	Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence	801277-801306	7	0.767
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	437875-437904	7	0.767
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	LN997843	Streptomyces reticuli genome assembly TUE45, plasmid : II	589787-589816	7	0.767
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	152375-152404	7	0.767
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP009112	Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence	768794-768823	7	0.767
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_LR134451	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence	237066-237095	7	0.767
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP009439	Streptomyces glaucescens strain GLA.O plasmid pSglau1, complete sequence	129573-129602	7	0.767
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP049701	Bradyrhizobium sp. 1S5 strain 323S2 plasmid pB323S2b, complete sequence	219897-219926	7	0.767
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP026653	Streptomyces dengpaensis strain XZHG99 plasmid unnamed1, complete sequence	55809-55838	7	0.767
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	MN096364	Mycobacterium phage Tomaszewski, complete genome	26626-26655	7	0.767
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	MH669000	Gordonia phage Ali17, complete genome	20724-20753	7	0.767
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	KF493883	Mycobacterium phage Mosby, complete genome	26533-26562	7	0.767
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	MN586026	Gordonia phage Leonard, complete genome	21384-21413	7	0.767
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NC_022065	Mycobacterium phage Contagion, complete genome	26533-26562	7	0.767
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NC_031112	Gordonia phage Phinally, complete genome	21381-21410	7	0.767
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	KF562099	Mycobacterium phage Bruin, complete genome	27049-27078	7	0.767
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	MK801726	Mycobacterium phage ChotaBhai, complete genome	26275-26304	7	0.767
CP012670_27	27.2\|4742862\|32\|CP012670\|CRISPRCasFinder	4742862-4742893	32	NC_003085	Myxococcus phage Mx8, complete genome	42678-42709	7	0.781
CP012670_27	27.2\|4742862\|32\|CP012670\|CRISPRCasFinder	4742862-4742893	32	AF396866	Bacteriophage Mx8, complete genome	42678-42709	7	0.781
CP012670_32	32.2\|6047734\|31\|CP012670\|CRISPRCasFinder	6047734-6047764	31	NZ_CP032325	Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence	392207-392237	7	0.774
CP012670_44	44.12\|9187688\|36\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9187688-9187723	36	NZ_CP017077	Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence	924697-924732	7	0.806
CP012670_44	44.17\|9188047\|37\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9188047-9188083	37	NZ_CP050101	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b6, complete sequence	92041-92077	7	0.811
CP012670_44	44.17\|9188047\|37\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9188047-9188083	37	NZ_CP053442	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence	91914-91950	7	0.811
CP012670_44	44.17\|9188047\|37\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9188047-9188083	37	NZ_CP007050	Rhizobium leguminosarum bv. trifolii WSM1689 plasmid unnamed, complete sequence	234563-234599	7	0.811
CP012670_44	44.17\|9188047\|37\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9188047-9188083	37	NZ_CP018233	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed5, complete sequence	68174-68210	7	0.811
CP012670_44	44.17\|9188047\|37\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9188047-9188083	37	NZ_CP048283	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248c, complete sequence	207630-207666	7	0.811
CP012670_6	6.4\|420633\|36\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	420633-420668	36	NZ_CP045074	Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence	2276-2311	8	0.778
CP012670_6	6.8\|420921\|35\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	420921-420955	35	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	168947-168981	8	0.771
CP012670_6	6.36\|422951\|36\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	422951-422986	36	NZ_CP016354	Prauserella marina strain DSM 45268 plasmid pPmarDSM45268, complete sequence	129200-129235	8	0.778
CP012670_6	6.44\|423542\|35\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	423542-423576	35	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	722626-722660	8	0.771
CP012670_6	6.44\|423542\|35\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	423542-423576	35	NC_016623	Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence	639957-639991	8	0.771
CP012670_8	8.2\|590513\|29\|CP012670\|CRT	590513-590541	29	MN369758	Gordonia phage NHagos, complete genome	51993-52021	8	0.724
CP012670_14	14.2\|1635437\|37\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	1635437-1635473	37	MK838113	Aeromonas phage LAh_7, complete genome	56952-56988	8	0.784
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	268455-268485	8	0.742
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1473382-1473412	8	0.742
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_LR134467	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 25, complete sequence	86843-86873	8	0.742
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1438055-1438085	8	0.742
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1539607-1539637	8	0.742
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	1503541-1503571	8	0.742
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	263475-263505	8	0.742
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	262283-262313	8	0.742
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	327030-327060	8	0.742
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	1042145-1042175	8	0.742
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	879017-879047	8	0.742
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	607914-607944	8	0.742
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	513402-513432	8	0.742
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	1162115-1162145	8	0.742
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	143405-143435	8	0.742
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	701145-701175	8	0.742
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1051077-1051107	8	0.742
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	753516-753546	8	0.742
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	416780-416810	8	0.742
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	267385-267415	8	0.742
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1473391-1473421	8	0.742
CP012670_21	21.1\|3388220\|29\|CP012670\|CRISPRCasFinder	3388220-3388248	29	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	266489-266517	8	0.724
CP012670_21	21.1\|3388220\|29\|CP012670\|CRISPRCasFinder	3388220-3388248	29	NZ_CP012477	Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence	356501-356529	8	0.724
CP012670_21	21.1\|3388220\|29\|CP012670\|CRISPRCasFinder	3388220-3388248	29	MN103533	Mycobacterium phage Weirdo19, complete genome	27249-27277	8	0.724
CP012670_21	21.1\|3388220\|29\|CP012670\|CRISPRCasFinder	3388220-3388248	29	NZ_CP049244	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence	961331-961359	8	0.724
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	527609-527638	8	0.733
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_AP022333	Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence	189662-189691	8	0.733
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	305451-305480	8	0.733
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NC_019410	Caulobacter phage CcrKarma, complete genome	146732-146761	8	0.733
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP050953	Rhodococcus sp. DMU1 plasmid unnamed	14514-14543	8	0.733
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP047145	Streptomyces sp. HF10 plasmid plas1, complete sequence	2191-2220	8	0.733
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP043622	Rhodobacteraceae bacterium SH-1 plasmid p4, complete sequence	27367-27396	8	0.733
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NC_008697	Nocardioides sp. JS614 plasmid pNOCA01, complete sequence	35799-35828	8	0.733
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	CP040467	Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence	54434-54463	8	0.733
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NC_019317	Streptomyces sp. X335 plasmid pDYM4.3k, complete sequence	2417-2446	8	0.733
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP034999	Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence	404161-404190	8	0.733
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NC_047992	Microbacterium phage Zeta1847, complete genome	17211-17240	8	0.733
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NC_019407	Caulobacter phage CcrMagneto, complete genome	144928-144957	8	0.733
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NC_019411	Caulobacter phage CcrSwift, complete genome	145506-145535	8	0.733
CP012670_32	32.2\|6047734\|31\|CP012670\|CRISPRCasFinder	6047734-6047764	31	NZ_CP049814	Monaibacterium sp. ALG8 plasmid unnamed3, complete sequence	15240-15270	8	0.742
CP012670_32	32.2\|6047734\|31\|CP012670\|CRISPRCasFinder	6047734-6047764	31	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	633854-633884	8	0.742
CP012670_32	32.2\|6047734\|31\|CP012670\|CRISPRCasFinder	6047734-6047764	31	MN657146	Cryobacterium sp. strain ANT_H28B plasmid pA28BH2, complete sequence	27667-27697	8	0.742
CP012670_32	32.2\|6047734\|31\|CP012670\|CRISPRCasFinder	6047734-6047764	31	NZ_CP043619	Rhodobacteraceae bacterium SH-1 plasmid p1, complete sequence	71450-71480	8	0.742
CP012670_32	32.2\|6047734\|31\|CP012670\|CRISPRCasFinder	6047734-6047764	31	NZ_CP040452	Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence	1375470-1375500	8	0.742
CP012670_44	44.12\|9187688\|36\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9187688-9187723	36	NC_010879	Burkholderia glumae strain BGR1 plasmid pBGF2, complete sequence	4759-4794	8	0.778
CP012670_4	4.8\|403189\|37\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	403189-403225	37	MN693342	Marine virus AFVG_25M9, complete genome	24454-24490	9	0.757
CP012670_6	6.4\|420633\|36\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	420633-420668	36	NZ_CP033582	Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence	246562-246597	9	0.75
CP012670_6	6.4\|420633\|36\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	420633-420668	36	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	663682-663717	9	0.75
CP012670_6	6.4\|420633\|36\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	420633-420668	36	MK977696	Gordonia phage SCentae, complete genome	46735-46770	9	0.75
CP012670_6	6.4\|420633\|36\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	420633-420668	36	MK977695	Gordonia phage Pupper, complete genome	46589-46624	9	0.75
CP012670_6	6.34\|422809\|35\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	422809-422843	35	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	4210308-4210342	9	0.743
CP012670_6	6.36\|422951\|36\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	422951-422986	36	NZ_LR594673	Variovorax sp. PBL-E5 plasmid 3	91385-91420	9	0.75
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_LR134451	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence	48043-48073	9	0.71
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	324414-324444	9	0.71
CP012670_19	19.1\|2162227\|31\|CP012670\|CRISPRCasFinder	2162227-2162257	31	NZ_CP006368	Aureimonas sp. AU20 plasmid pAU20a, complete sequence	276610-276640	9	0.71
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP018784	Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence	293441-293470	9	0.7
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP015236	Rhodococcus fascians D188 plasmid pFiD188, complete sequence	162759-162788	9	0.7
CP012670_22	22.2\|3586592\|30\|CP012670\|CRT	3586592-3586621	30	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	933812-933841	9	0.7
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	382989-383023	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	401383-401417	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	386294-386328	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	446560-446594	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	537531-537565	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	38383-38417	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	388379-388413	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	996190-996224	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	1381554-1381588	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	614511-614545	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	387554-387588	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	399026-399060	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	384321-384355	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	280430-280464	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	383410-383444	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	400274-400308	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	378421-378455	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	384552-384586	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	387572-387606	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	400274-400308	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	399840-399874	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	384184-384218	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	400273-400307	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	380640-380674	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	399840-399874	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	384184-384218	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	400274-400308	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	399840-399874	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	380643-380677	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	399844-399878	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	384184-384218	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	384184-384218	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	384184-384218	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	400274-400308	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	400274-400308	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	380643-380677	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	399009-399043	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	398968-399002	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	391173-391207	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	390785-390819	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	382695-382729	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	400274-400308	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	380643-380677	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	399840-399874	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	400269-400303	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	380643-380677	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	380643-380677	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	400274-400308	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	384186-384220	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	400274-400308	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	400274-400308	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	241646-241680	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	250262-250296	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1554387-1554421	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	31738-31772	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	1793180-1793214	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	695424-695458	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	1710320-1710354	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	474542-474576	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1692382-1692416	9	0.743
CP012670_44	44.2\|9186953\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9186953-9186987	35	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1692382-1692416	9	0.743
CP012670_44	44.17\|9188047\|37\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9188047-9188083	37	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	387282-387318	9	0.757
CP012670_44	44.40\|9189724\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9189724-9189758	35	NZ_CP054620	Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence	37393-37427	9	0.743
CP012670_44	44.48\|9190302\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9190302-9190336	35	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	47492-47526	9	0.743
CP012670_4	4.4\|402894\|35\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	402894-402928	35	NZ_CP016891	Pantoea agglomerans strain C410P1 plasmid unnamed2, complete sequence	194216-194250	10	0.714
CP012670_4	4.8\|403189\|37\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	403189-403225	37	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	1512252-1512288	10	0.73
CP012670_6	6.36\|422951\|36\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	422951-422986	36	NZ_LR594669	Variovorax sp. SRS16 plasmid 4	93072-93107	10	0.722
CP012670_14	14.10\|1636022\|36\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	1636022-1636057	36	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	1691486-1691521	10	0.722
CP012670_14	14.12\|1636168\|37\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	1636168-1636204	37	NC_009426	Novosphingobium aromaticivorans DSM 12444 plasmid pNL1, complete sequence	17492-17528	10	0.73
CP012670_14	14.12\|1636168\|37\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	1636168-1636204	37	NC_002033	Novosphingobium aromaticivorans plasmid pNL1, complete sequence	145342-145378	10	0.73
CP012670_14	14.12\|1636168\|37\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	1636168-1636204	37	NZ_CP033228	Sphingobium yanoikuyae strain SJTF8 plasmid pF2, complete sequence	132705-132741	10	0.73
CP012670_15	15.4\|1639332\|35\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	1639332-1639366	35	NZ_LR594673	Variovorax sp. PBL-E5 plasmid 3	41565-41599	10	0.714
CP012670_15	15.4\|1639332\|35\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	1639332-1639366	35	NZ_LR594669	Variovorax sp. SRS16 plasmid 4	461973-462007	10	0.714
CP012670_32	32.2\|6047734\|31\|CP012670\|CRISPRCasFinder	6047734-6047764	31	NZ_CP023740	Methylosinus trichosporium OB3b plasmid pOB3b3, complete sequence	114769-114799	10	0.677
CP012670_33	33.1\|6118239\|34\|CP012670\|CRISPRCasFinder	6118239-6118272	34	NZ_CP016289	Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence	78942-78975	10	0.706
CP012670_44	44.7\|9187320\|38\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9187320-9187357	38	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	556667-556704	10	0.737
CP012670_44	44.11\|9187615\|37\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9187615-9187651	37	NZ_CP019608	Tessaracoccus flavescens strain SST-39T plasmid unnamed, complete sequence	23375-23411	10	0.73
CP012670_44	44.21\|9188338\|38\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9188338-9188375	38	NZ_CP011046	Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid pCI3, complete sequence	27540-27577	10	0.737
CP012670_44	44.21\|9188338\|38\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9188338-9188375	38	NZ_CP021037	Clavibacter michiganensis subsp. insidiosus strain R1-3 plasmid pCI3, complete sequence	27539-27576	10	0.737
CP012670_44	44.25\|9188630\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9188630-9188664	35	NZ_CP018821	Sphingomonas koreensis strain ABOJV plasmid tig00000001, complete sequence	272087-272121	10	0.714
CP012670_44	44.25\|9188630\|35\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9188630-9188664	35	CP006583	Mesorhizobium huakuii 7653R plasmid pMHb, complete sequence	53068-53102	10	0.714
CP012670_4	4.8\|403189\|37\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	403189-403225	37	NZ_CP026517	Deinococcus sp. NW-56 plasmid unnamed1, complete sequence	100529-100565	11	0.703
CP012670_15	15.4\|1639332\|35\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	1639332-1639366	35	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	2690174-2690208	11	0.686
CP012670_27	27.2\|4742862\|32\|CP012670\|CRISPRCasFinder	4742862-4742893	32	NZ_CP018229	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence	562971-563002	11	0.656
CP012670_27	27.2\|4742862\|32\|CP012670\|CRISPRCasFinder	4742862-4742893	32	NZ_CP054032	Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence	832909-832940	11	0.656
CP012670_44	44.44\|9190010\|37\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9190010-9190046	37	NZ_CP006987	Rhizobium sp. IE4771 plasmid pRetIE4771a, complete sequence	65762-65798	11	0.703
CP012670_44	44.17\|9188047\|37\|CP012670\|CRISPRCasFinder,CRT,PILER-CR	9188047-9188083	37	NZ_CP007796	Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence	228440-228476	12	0.676
CP012670_4	4.9\|403262\|38\|CP012670\|PILER-CR,CRISPRCasFinder,CRT	403262-403299	38	NZ_CP050100	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b3, complete sequence	235724-235761	13	0.658

1. spacer 32.1|6047683|22|CP012670|CRISPRCasFinder matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 2, identity: 0.909

gcggcgccgcgacgggtgatcc	CRISPR spacer
gcggcgccgcggcgggtgatct	Protospacer
***********.*********.

2. spacer 41.3|8683523|22|CP012670|CRT matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 2, identity: 0.909

cgaccccggaaacgagctggaa	CRISPR spacer
cgaccccggaaacgagcgggac	Protospacer
***************** ***

3. spacer 21.1|3388220|29|CP012670|CRISPRCasFinder matches to KT281796 (Mycobacterium phage Zakhe101, complete genome) position: , mismatch: 3, identity: 0.897

cccgcccgcgtgggcgggcgggccgagag	CRISPR spacer
cccgcccgctggggcgggcgggccgagcg	Protospacer
*********  **************** *

4. spacer 21.1|3388220|29|CP012670|CRISPRCasFinder matches to NC_022325 (Mycobacterium phage Dylan, complete genome) position: , mismatch: 3, identity: 0.897

cccgcccgcgtgggcgggcgggccgagag	CRISPR spacer
cccgcccgctggggcgggcgggccgagcg	Protospacer
*********  **************** *

5. spacer 8.2|590513|29|CP012670|CRT matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 4, identity: 0.862

accgcc--gaggttgaggttggccgggccga	CRISPR spacer
--cgcctggaagttgaggttggccgggacga	Protospacer
  ****  **.**************** ***

6. spacer 10.1|831630|27|CP012670|CRISPRCasFinder matches to NZ_CP020399 (Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.852

gaggcccccgcagcgcgcgacgaacac	CRISPR spacer
gcagcccgcgcagcgcgcggcgaacac	Protospacer
* .**** ***********.*******

7. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP025513 (Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.867

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
gccgtcaccggagctgccgtcgccgcagtc	Protospacer
**************.**********. *.*

8. spacer 10.1|831630|27|CP012670|CRISPRCasFinder matches to NZ_CP019603 (Croceicoccus marinus strain E4A9 plasmid pCME4A9I, complete sequence) position: , mismatch: 5, identity: 0.815

gaggcccccgcagcgcgcgacgaacac	CRISPR spacer
gaggcccgcgccgcgcgcgacgatgcc	Protospacer
******* *** ***********   *

9. spacer 10.1|831630|27|CP012670|CRISPRCasFinder matches to NC_023286 (Streptomyces sp. F12 plasmid pFRL6, complete sequence) position: , mismatch: 5, identity: 0.815

gaggcccccgcagcgcgcgacgaacac	CRISPR spacer
gtggcccccgcagcccgggacgaactg	Protospacer
* ************ ** *******

10. spacer 10.1|831630|27|CP012670|CRISPRCasFinder matches to KM879463 (Arthrobacter phage vB_ArtM-ArV1, complete genome) position: , mismatch: 5, identity: 0.815

gaggcccccgcagcgcgcgacgaacac	CRISPR spacer
aaagccgccgccgcgcgcgacgaacag	Protospacer
.*.*** **** **************

11. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_AP022566 (Mycolicibacterium alvei strain JCM 12272 plasmid pJCM12272, complete sequence) position: , mismatch: 5, identity: 0.839

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
gccggcgcctcgcgggccgcgccgcggtcgt	Protospacer
* ** * **********************.

12. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to KX683428 (Mycobacterium phage TBond007, complete genome) position: , mismatch: 5, identity: 0.839

-ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
aggcg-atccgcgcgggcctcgccgcggtcaa	Protospacer
 ****  *** ******** ***********.

13. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to KR080206 (Mycobacterium phage ShedlockHolmes, complete genome) position: , mismatch: 5, identity: 0.839

-ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
aggcg-atccgcgcgggcctcgccgcggtcaa	Protospacer
 ****  *** ******** ***********.

14. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NC_042325 (Mycobacterium virus Pixie, complete genome) position: , mismatch: 5, identity: 0.839

-ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
aggcg-atccgcgcgggcctcgccgcggtcaa	Protospacer
 ****  *** ******** ***********.

15. spacer 21.1|3388220|29|CP012670|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.828

cccgcccgcgtgggcgggcgggccgagag	CRISPR spacer
gccgcccgcgtgggcgggctggacgaggt	Protospacer
 ****************** ** ****.

16. spacer 21.1|3388220|29|CP012670|CRISPRCasFinder matches to NZ_CP019037 (Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.828

cccgcccgcgtgggcgggcgggccgagag	CRISPR spacer
cgcttccgcgcgggcggccgggccgagag	Protospacer
* * .*****.****** ***********

17. spacer 22.2|3586592|30|CP012670|CRT matches to CP054921 (Streptomyces sp. NA03103 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
ggcgtcaccgcggccgccgtcgccgtggtc	Protospacer
* ******** .************** *.*

18. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

--gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
tcgccg--agcggcgccgccgtcgccgtcgct	Protospacer
  ****  * *** *****************.

19. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_LR134459 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 17, complete sequence) position: , mismatch: 5, identity: 0.833

-gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
taccg-cgccggggacgccgtcgccgtcgcc	Protospacer
 .*** *.****.* ****************

20. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

--gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
tcgccg--agcggcgccgccgtcgccgtcgct	Protospacer
  ****  * *** *****************.

21. spacer 22.2|3586592|30|CP012670|CRT matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

--gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
tcgccg--agcggcgccgccgtcgccgtcgct	Protospacer
  ****  * *** *****************.

22. spacer 22.2|3586592|30|CP012670|CRT matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

--gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
tcgccg--agcggcgccgccgtcgccgtcgct	Protospacer
  ****  * *** *****************.

23. spacer 6.4|420633|36|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 6, identity: 0.833

cgcgacgacctcgccgccgtcgaggccca-ggcagcg	CRISPR spacer
accgacgacatcgacgccgtcgaggcccacggcacc-	Protospacer
  ******* *** *************** **** *

24. spacer 16.5|1641627|36|CP012670|PILER-CR matches to NZ_CP027671 (Simplicispira suum strain SC1-8 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.833

cagtctcttgcgagtgccatgtccgatgcgtccttt	CRISPR spacer
ctgcggctggcgggtgccatgtccgatgcgtccttt	Protospacer
* *.  ** ***.***********************

25. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP016463 (Bosea sp. RAC05 plasmid pBSY19_1, complete sequence) position: , mismatch: 6, identity: 0.806

ggcgcctcctcgcgggccgcgccgcg-gtcag	CRISPR spacer
tcgacctcctcgcgggccgcgccgcgcatca-	Protospacer
   .********************** .***

26. spacer 21.1|3388220|29|CP012670|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.793

cccgcccgcgtgggcgggcgggccgagag	CRISPR spacer
ccggcccgcgtgggcgggctggcgctgat	Protospacer
** **************** ***   **

27. spacer 21.1|3388220|29|CP012670|CRISPRCasFinder matches to NZ_CP033971 (Cupriavidus pauculus strain FDAARGOS_614 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.793

cccgcccgcgtgggcgggcgggccgagag	CRISPR spacer
gctgcccgcgtgggcgggctggacgaggt	Protospacer
 *.**************** ** ****.

28. spacer 21.1|3388220|29|CP012670|CRISPRCasFinder matches to NZ_LR134452 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 10, complete sequence) position: , mismatch: 6, identity: 0.793

cccgcccgcgtgggcgggcgggccgagag	CRISPR spacer
gtggcccgcgtcggcgggcgggccgggcg	Protospacer
 . ******** *************.* *

29. spacer 21.1|3388220|29|CP012670|CRISPRCasFinder matches to NZ_CP011665 (Streptomyces sp. Mg1 plasmid pSMg1-1, complete sequence) position: , mismatch: 6, identity: 0.793

cccgcccgcgtgggcgggcgggccgagag---	CRISPR spacer
gccgcccgcgggggcgggcgg---gggagtcc	Protospacer
 ********* **********   *.***

30. spacer 21.1|3388220|29|CP012670|CRISPRCasFinder matches to NZ_CP033582 (Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence) position: , mismatch: 6, identity: 0.793

cccgcccgcgtgggcgggcgggccgagag---	CRISPR spacer
gccgcccgcgggggcgggcgg---gggagtcc	Protospacer
 ********* **********   *.***

31. spacer 21.1|3388220|29|CP012670|CRISPRCasFinder matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.793

cccgcccgcgtgggcgggcgggccgagag	CRISPR spacer
cggccccgcgtggacgggcgggcagaggg	Protospacer
*   *********.********* ***.*

32. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP027299 (Streptomyces sp. SGAir0924 plasmid unnamed_5) position: , mismatch: 6, identity: 0.8

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
cgcgtcaccggagccgccatcgccgtctga	Protospacer
  ****************.********

33. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 6, identity: 0.8

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
ctgctcgccggaaccgccgtcgccgtcgcc	Protospacer
 .  **.*****.*****************

34. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 6, identity: 0.8

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
cccggcatcggagccgccgtcgccgacctc	Protospacer
 *** **.***************** * .*

35. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP025613 (Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
gccgtcatcgaagccgccgtcgcctccttc	Protospacer
*******.**.************* .* .*

36. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP030761 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
tcctgtgccgaagccgccgtcgccgtcgcc	Protospacer
 **  ..***.*******************

37. spacer 22.2|3586592|30|CP012670|CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 6, identity: 0.8

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
tccgtcaccggagcctccggcgcccgcggc	Protospacer
 ************** *** ****  ** *

38. spacer 22.2|3586592|30|CP012670|CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 6, identity: 0.8

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
tccgtcaccggagcctccggcgcccgcggc	Protospacer
 ************** *** ****  ** *

39. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 6, identity: 0.8

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
ccagtcagcggatccgccgtcgccgtcaac	Protospacer
 * **** **** **************. *

40. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP023712 (Rhodococcus ruber strain YC-YT1 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
gtgatcaccggtgccgccgtcggcgtcgac	Protospacer
*. .******* ********** ***** *

41. spacer 22.2|3586592|30|CP012670|CRT matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 6, identity: 0.8

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
accccgagcggagccgccgtcgccgacgcc	Protospacer
.** . * ***************** ****

42. spacer 22.2|3586592|30|CP012670|CRT matches to MK305888 (Streptomyces phage Austintatious, complete genome) position: , mismatch: 6, identity: 0.8

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
ctcatgaccggagccgacgccgccgtcgcc	Protospacer
 .*.* ********** **.**********

43. spacer 22.2|3586592|30|CP012670|CRT matches to KY092481 (Streptomyces phage PapayaSalad, complete genome) position: , mismatch: 6, identity: 0.8

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
ctcatgaccggagccgacgccgccgtcgcc	Protospacer
 .*.* ********** **.**********

44. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_LR134459 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 17, complete sequence) position: , mismatch: 6, identity: 0.8

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
ggcgctgccggtgccgccctcgccgtcgcc	Protospacer
* **...**** ****** ***********

45. spacer 22.2|3586592|30|CP012670|CRT matches to CP000876 (Herpetosiphon aurantiacus DSM 785 plasmid pHAU01, complete sequence) position: , mismatch: 6, identity: 0.8

gccgtcaccggagccgccgtcgccgtcgcc-	CRISPR spacer
gccgtcaccggagtcaccgtcg-cgccatca	Protospacer
*************.*.****** **.*..*

46. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 6, identity: 0.8

-gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
ggccggt-tcggagccgccgccgccgtcgct	Protospacer
 **** . .***********.*********.

47. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP033582 (Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence) position: , mismatch: 6, identity: 0.8

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
gcgctcaccggagccgccgtgcccgtcccg	Protospacer
**  ****************  ***** *

48. spacer 3.21|401068|36|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042824 (Rhizobium sp. WL3 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.806

ggaggatcacgatggctacacggattgtggcgctgt	CRISPR spacer
cgaggatcacgatggctaccaggattgtcaggctct	Protospacer
 ******************  ******* . *** *

49. spacer 3.21|401068|36|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039905 (Agrobacterium tumefaciens strain CFBP6623 plasmid pAtCFBP6623a, complete sequence) position: , mismatch: 7, identity: 0.806

ggaggatcacgatggctacacggattgtggcgctgt	CRISPR spacer
cgaggatcacgatggctaccaggattgtcaggctct	Protospacer
 ******************  ******* . *** *

50. spacer 3.21|401068|36|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039909 (Agrobacterium tumefaciens strain CFBP6624 plasmid pAtCFBP6624, complete sequence) position: , mismatch: 7, identity: 0.806

ggaggatcacgatggctacacggattgtggcgctgt	CRISPR spacer
cgaggatcacgatggctaccaggattgtcaggctct	Protospacer
 ******************  ******* . *** *

51. spacer 3.21|401068|36|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LS974446 (Rhizobium selenitireducens ATCC BAA-1503 isolate T2.30D-1.1_plasmid plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.806

ggaggatcacgatggctacacggattgtggcgctgt	CRISPR spacer
cgaggatcacgatggctaccaggattgtcaggctct	Protospacer
 ******************  ******* . *** *

52. spacer 6.19|421719|36|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NC_017957 (Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence) position: , mismatch: 7, identity: 0.806

cggctgacg-cgcctcgggcgcctccgtcccctcggg	CRISPR spacer
-cgccgccgccgtctcgggcgcctccgccccctcgga	Protospacer
  **.* ** **.**************.********.

53. spacer 8.2|590513|29|CP012670|CRT matches to NZ_CP046321 (Gordonia bronchialis strain FDAARGOS_676 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

accgccgaggttgaggttggccgggccga	CRISPR spacer
ttcggcgaggttgaggttggcctggtggt	Protospacer
 .** ***************** **. *

54. spacer 8.2|590513|29|CP012670|CRT matches to NC_013442 (Gordonia bronchialis DSM 43247 plasmid pGBRO01, complete sequence) position: , mismatch: 7, identity: 0.759

accgccgaggttgaggttggccgggccga	CRISPR spacer
ttcggcgaggttgaggttggcctggtggt	Protospacer
 .** ***************** **. *

55. spacer 16.7|1641625|38|CP012670|CRISPRCasFinder matches to NZ_CP027671 (Simplicispira suum strain SC1-8 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.816

gccagtctcttgcgagtgccatgtccgatgcgtccttt	CRISPR spacer
gactgcggctggcgggtgccatgtccgatgcgtccttt	Protospacer
* * *.  ** ***.***********************

56. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.774

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgcgcctcctcgcgcgccgcgcagctctcgc	Protospacer
 ************* ******* **  **.

57. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.774

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgcgcctcctcgcgcgccgcgcagctctcgc	Protospacer
 ************* ******* **  **.

58. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.774

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgcgcctcctcgcgcgccgcgcagctctcgc	Protospacer
 ************* ******* **  **.

59. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.774

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgcgcctcctcgcgcgccgcgcagctctcgc	Protospacer
 ************* ******* **  **.

60. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.774

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgcgcctcctcgcgcgccgcgcagctctcgc	Protospacer
 ************* ******* **  **.

61. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP009439 (Streptomyces glaucescens strain GLA.O plasmid pSglau1, complete sequence) position: , mismatch: 7, identity: 0.774

ggcgcctcctcgcgggccgcgcc-gcggtcag	CRISPR spacer
agcgcctcctcggcggccgcgccggccgcct-	Protospacer
.***********  ********* ** *.*

62. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP032053 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL2, complete sequence) position: , mismatch: 7, identity: 0.774

ggcgc-ctcctcgcgggccgcgccgcggtcag	CRISPR spacer
-tcgcgctcctcgcgggcctcgacgcggttgc	Protospacer
  *** ************* ** ******..

63. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.774

ggcgcctcctcgcgggccgcgccgcggtcag-	CRISPR spacer
tgcgcctcctcgccggcctcgccg-agccggc	Protospacer
 ************ **** ***** .*.*.*

64. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.774

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
gcctcggtctcgccggccccgccgcggtcag	Protospacer
* * *  .***** **** ************

65. spacer 21.1|3388220|29|CP012670|CRISPRCasFinder matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.759

cccgcccgcgtgggcgggcgggccgagag	CRISPR spacer
ggcgtccgcgtcggcgggcgggccgcgga	Protospacer
  **.****** ************* *..

66. spacer 21.1|3388220|29|CP012670|CRISPRCasFinder matches to NZ_CP024427 (Paracoccus yeei strain TT13 plasmid pTT13-5, complete sequence) position: , mismatch: 7, identity: 0.759

cccgcccgcgtgggcgggcgggccgagag	CRISPR spacer
gccgcccgcgtcggcgggcggccccgtcg	Protospacer
 ********** ********* ** .  *

67. spacer 21.1|3388220|29|CP012670|CRISPRCasFinder matches to NZ_CP020443 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.759

cccgcccgcgtgggcgggcgggccgagag	CRISPR spacer
gccgcccgcgtcggcgggcggccccgtcg	Protospacer
 ********** ********* ** .  *

68. spacer 21.1|3388220|29|CP012670|CRISPRCasFinder matches to NZ_CP044079 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.759

cccgcccgcgtgggcgggcgggccgagag	CRISPR spacer
gccgcccgcgtcggcgggcggccccgtcg	Protospacer
 ********** ********* ** .  *

69. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP027299 (Streptomyces sp. SGAir0924 plasmid unnamed_5) position: , mismatch: 7, identity: 0.767

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
ccggccctcggcgccgccgtcgccgtcgcg	Protospacer
 * *.* .*** *****************

70. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
gccgtcaccggaaccgccgtctccgggctg	Protospacer
************.******** ***   .

71. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP035002 (Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence) position: , mismatch: 7, identity: 0.767

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
ttagtcaccggtgccgccggcgccgtcggt	Protospacer
 . ******** ******* ******** .

72. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 7, identity: 0.767

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
ggtcttgccgaagccgccgacgccgtcgcc	Protospacer
* . *..***.******** **********

73. spacer 22.2|3586592|30|CP012670|CRT matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 7, identity: 0.767

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
gtcgtcaccgacgccgccgtcgccgcgagc	Protospacer
*.********. *************. . *

74. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.767

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
ggtcttgccgaagccgccgacgccgtcgcc	Protospacer
* . *..***.******** **********

75. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP009112 (Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence) position: , mismatch: 7, identity: 0.767

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
cgtgacgccggtgccgacgtcgccgtcgcc	Protospacer
  .* *.**** **** *************

76. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_LR134451 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence) position: , mismatch: 7, identity: 0.767

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
gtctgggccggagccgtcggcgccgtcgcc	Protospacer
*.*   .*********.** **********

77. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP009439 (Streptomyces glaucescens strain GLA.O plasmid pSglau1, complete sequence) position: , mismatch: 7, identity: 0.767

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
gacctcatcggagccgccgccgccgtcctg	Protospacer
* * ***.***********.******* .

78. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP049701 (Bradyrhizobium sp. 1S5 strain 323S2 plasmid pB323S2b, complete sequence) position: , mismatch: 7, identity: 0.767

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
caggccgccggagccgccgccgccgccgcc	Protospacer
   *.*.************.*****.****

79. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP026653 (Streptomyces dengpaensis strain XZHG99 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
gcgccggcgggagcggccgtcgccgtcgcc	Protospacer
**  . .* ***** ***************

80. spacer 22.2|3586592|30|CP012670|CRT matches to MN096364 (Mycobacterium phage Tomaszewski, complete genome) position: , mismatch: 7, identity: 0.767

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
ggcgccaccggagccgccgacgccgcgggt	Protospacer
* **.************** *****. * .

81. spacer 22.2|3586592|30|CP012670|CRT matches to MH669000 (Gordonia phage Ali17, complete genome) position: , mismatch: 7, identity: 0.767

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
accgtcaccggcgccgccgtcggtaccgtc	Protospacer
.********** ********** ...**.*

82. spacer 22.2|3586592|30|CP012670|CRT matches to KF493883 (Mycobacterium phage Mosby, complete genome) position: , mismatch: 7, identity: 0.767

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
ggcgccaccggagccgccgacgccgcgggt	Protospacer
* **.************** *****. * .

83. spacer 22.2|3586592|30|CP012670|CRT matches to MN586026 (Gordonia phage Leonard, complete genome) position: , mismatch: 7, identity: 0.767

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
accgtcaccggcgccgccgtcggtaccgtc	Protospacer
.********** ********** ...**.*

84. spacer 22.2|3586592|30|CP012670|CRT matches to NC_022065 (Mycobacterium phage Contagion, complete genome) position: , mismatch: 7, identity: 0.767

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
ggcgccaccggagccgccgacgccgcgggt	Protospacer
* **.************** *****. * .

85. spacer 22.2|3586592|30|CP012670|CRT matches to NC_031112 (Gordonia phage Phinally, complete genome) position: , mismatch: 7, identity: 0.767

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
accgtcaccggcgccgccgtcggtaccgtc	Protospacer
.********** ********** ...**.*

86. spacer 22.2|3586592|30|CP012670|CRT matches to KF562099 (Mycobacterium phage Bruin, complete genome) position: , mismatch: 7, identity: 0.767

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
ggcgccaccggagccgccgacgccgcgggt	Protospacer
* **.************** *****. * .

87. spacer 22.2|3586592|30|CP012670|CRT matches to MK801726 (Mycobacterium phage ChotaBhai, complete genome) position: , mismatch: 7, identity: 0.767

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
ggcgccaccggagccgccgacgccgcgggt	Protospacer
* **.************** *****. * .

88. spacer 27.2|4742862|32|CP012670|CRISPRCasFinder matches to NC_003085 (Myxococcus phage Mx8, complete genome) position: , mismatch: 7, identity: 0.781

ttcccctcgcggtcgcgccacctcccctcaca	CRISPR spacer
ttcccctcgtcgtcgcgccacctccatagcca	Protospacer
*********. ************** .   **

89. spacer 27.2|4742862|32|CP012670|CRISPRCasFinder matches to AF396866 (Bacteriophage Mx8, complete genome) position: , mismatch: 7, identity: 0.781

ttcccctcgcggtcgcgccacctcccctcaca	CRISPR spacer
ttcccctcgtcgtcgcgccacctccatagcca	Protospacer
*********. ************** .   **

90. spacer 32.2|6047734|31|CP012670|CRISPRCasFinder matches to NZ_CP032325 (Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence) position: , mismatch: 7, identity: 0.774

agggcacgggcggcgagggcacaggcggtga	CRISPR spacer
agcgacggggcggcgggggcgcaggcggtgc	Protospacer
** *   ********.****.*********

91. spacer 44.12|9187688|36|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 7, identity: 0.806

agcg-gacgctcgtcgagcaggcgcgccggctgacca	CRISPR spacer
-gcgtgtcgctcggcgagcaggcgcggcggctgtgga	Protospacer
 *** * ****** ************ ******   *

92. spacer 44.17|9188047|37|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050101 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b6, complete sequence) position: , mismatch: 7, identity: 0.811

gcgcggccgagctcgcggccgaggaagggatccacgt	CRISPR spacer
ccgcggctgagctcgcggccgaggaagagattgccga	Protospacer
 ******.*******************.***.  **

93. spacer 44.17|9188047|37|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053442 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence) position: , mismatch: 7, identity: 0.811

gcgcggccgagctcgcggccgaggaagggatccacgt	CRISPR spacer
ccgcggctgagctcgcggccgaggaagagattgccga	Protospacer
 ******.*******************.***.  **

94. spacer 44.17|9188047|37|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007050 (Rhizobium leguminosarum bv. trifolii WSM1689 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.811

gcgcggccgagctcgcggccgaggaagggatccacgt	CRISPR spacer
ccgcggctgagctcgcggccgaggaagagattgccga	Protospacer
 ******.*******************.***.  **

95. spacer 44.17|9188047|37|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018233 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.811

gcgcggccgagctcgcggccgaggaagggatccacgt	CRISPR spacer
ccgcggctgagctcgcggccgaggaagagattgccga	Protospacer
 ******.*******************.***.  **

96. spacer 44.17|9188047|37|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048283 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248c, complete sequence) position: , mismatch: 7, identity: 0.811

gcgcggccgagctcgcggccgaggaagggatccacgt	CRISPR spacer
ccgcggctgagctcgcggccgaggaagagattgccga	Protospacer
 ******.*******************.***.  **

97. spacer 6.4|420633|36|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045074 (Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.778

cgcgacgacctcgccgccgtcgaggcccaggcagcg	CRISPR spacer
cccgacgacatcgacgccgtcgaggccctgcatgct	Protospacer
* ******* *** ************** *   **

98. spacer 6.8|420921|35|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 8, identity: 0.771

-gtcgggccaagcaggctggcgaccaccgcgttgac	CRISPR spacer
cggtagatc-agcaggccggcgaccaccgcgtagac	Protospacer
 * ..*..* *******.************** ***

99. spacer 6.36|422951|36|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016354 (Prauserella marina strain DSM 45268 plasmid pPmarDSM45268, complete sequence) position: , mismatch: 8, identity: 0.778

cccttggcgacgtcgacggcgcgccgcgcctgctcg	CRISPR spacer
acgtcaccgacgtcgacgccgcgcggcgcctgctgg	Protospacer
 * *.. *********** ***** ********* *

100. spacer 6.44|423542|35|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.771

cgcccccggcgccgcctctgccacgctggacgggc	CRISPR spacer
gggcgacggcgccgcctccgccacgctcgacgacc	Protospacer
 * *  ************.******** ****. *

101. spacer 6.44|423542|35|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 8, identity: 0.771

cgcccccggcgccgcctctgccacgctggacgggc	CRISPR spacer
ggcactgaccgccgcctccgccacgctggacgagc	Protospacer
 ** *. . *********.*************.**

102. spacer 8.2|590513|29|CP012670|CRT matches to MN369758 (Gordonia phage NHagos, complete genome) position: , mismatch: 8, identity: 0.724

accgccgaggttgaggttggccgggccga	CRISPR spacer
gtctgggaggttgaggtcggccgggccac	Protospacer
..*   ***********.*********.

103. spacer 14.2|1635437|37|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to MK838113 (Aeromonas phage LAh_7, complete genome) position: , mismatch: 8, identity: 0.784

gtctggctgccgccgtggagcgcgaggagctcccgca-----	CRISPR spacer
gtctggctgccgccgaggagcccgagga-----cgaagaagc	Protospacer
*************** ***** ******     ** *

104. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 8, identity: 0.742

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgggtctcctcgcgggcatcgccgcggtgct	Protospacer
 * *.************  *********

105. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.742

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgggtctcctcgcgggcatcgccgcggtgct	Protospacer
 * *.************  *********

106. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_LR134467 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 25, complete sequence) position: , mismatch: 8, identity: 0.742

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgggcctgctcgcgggccgctccgcgccgac	Protospacer
 * **** ************ ***** . *

107. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.742

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgggtctcctcgcgggcatcgccgcggtgct	Protospacer
 * *.************  *********

108. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.742

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgggtctcctcgcgggcatcgccgcggtgct	Protospacer
 * *.************  *********

109. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 8, identity: 0.742

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgggtctcctcgcgggcatcgccgcggtgct	Protospacer
 * *.************  *********

110. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.742

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgggtctcctcgcgggcatcgccgcggtgct	Protospacer
 * *.************  *********

111. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 8, identity: 0.742

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgggtctcctcgcgggcatcgccgcggtgct	Protospacer
 * *.************  *********

112. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
agcgcctcctcgcggacctcgccgacgaacg	Protospacer
.**************.** *****  *   *

113. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.742

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgggtctcctcgcgggcatcgccgcggtgct	Protospacer
 * *.************  *********

114. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.742

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgggtctcctcgcgggcatcgccgcggtgct	Protospacer
 * *.************  *********

115. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.742

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgggtctcctcgcgggcatcgccgcggtgct	Protospacer
 * *.************  *********

116. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.742

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgggtctcctcgcgggcatcgccgcggtgct	Protospacer
 * *.************  *********

117. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.742

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgggtctcctcgcgggcatcgccgcggtgct	Protospacer
 * *.************  *********

118. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.742

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgggtctcctcgcgggcatcgccgcggtgct	Protospacer
 * *.************  *********

119. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.742

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgggtctcctcgcgggcatcgccgcggtgct	Protospacer
 * *.************  *********

120. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.742

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgggtctcctcgcgggcatcgccgcggtgct	Protospacer
 * *.************  *********

121. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.742

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgggtctcctcgcgggcatcgccgcggtgct	Protospacer
 * *.************  *********

122. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.742

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgggtctcctcgcgggcatcgccgcggtgct	Protospacer
 * *.************  *********

123. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.742

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgggtctcctcgcgggcatcgccgcggtgct	Protospacer
 * *.************  *********

124. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.742

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
cgggtctcctcgcgggcatcgccgcggtgct	Protospacer
 * *.************  *********

125. spacer 21.1|3388220|29|CP012670|CRISPRCasFinder matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 8, identity: 0.724

cccgcccgcgtgggcgggcgggccgagag	CRISPR spacer
ggcgccaccgtgggcgggcgggccgccgt	Protospacer
  ****  *****************  .

126. spacer 21.1|3388220|29|CP012670|CRISPRCasFinder matches to NZ_CP012477 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.724

cccgcccgcgtgggcgggcgggccgagag	CRISPR spacer
gccgccggcgtgggcgggctggccagctc	Protospacer
 ***** ************ ****..

127. spacer 21.1|3388220|29|CP012670|CRISPRCasFinder matches to MN103533 (Mycobacterium phage Weirdo19, complete genome) position: , mismatch: 8, identity: 0.724

cccgcccgcgtgggcgggcgggccgagag	CRISPR spacer
tccccccgcgcgggcgggcgggcccgccc	Protospacer
.** ******.************* .

128. spacer 21.1|3388220|29|CP012670|CRISPRCasFinder matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.724

cccgcccgcgtgggcgggcgggccgagag	CRISPR spacer
gccgccggcgtgggcgggcgcgccttttc	Protospacer
 ***** ************* ***

129. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.733

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
gccgtcaccggggcggccgtcgcctatctg	Protospacer
***********.** *********  . .

130. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_AP022333 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence) position: , mismatch: 8, identity: 0.733

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
cgttccgccggagccgccggcgccatcgcc	Protospacer
  . .*.************ ****.*****

131. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
gccgtcgccggagccgccggcgcttctccg	Protospacer
******.************ ***. .. *

132. spacer 22.2|3586592|30|CP012670|CRT matches to NC_019410 (Caulobacter phage CcrKarma, complete genome) position: , mismatch: 8, identity: 0.733

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
cccgccaccgcagccgccgtcgccacacct	Protospacer
 ***.***** *************..  *.

133. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP050953 (Rhodococcus sp. DMU1 plasmid unnamed) position: , mismatch: 8, identity: 0.733

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
gaccaggtgggagccgccgtcgacgtcgcc	Protospacer
* *   .. ************* *******

134. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP047145 (Streptomyces sp. HF10 plasmid plas1, complete sequence) position: , mismatch: 8, identity: 0.733

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
tccgtgaccggcgccgccgtcgcctcccgt	Protospacer
 **** ***** ************ .*  .

135. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP043622 (Rhodobacteraceae bacterium SH-1 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.733

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
aaccgagcccgagccgtcgtcgccgtcgcc	Protospacer
. *   .** ******.*************

136. spacer 22.2|3586592|30|CP012670|CRT matches to NC_008697 (Nocardioides sp. JS614 plasmid pNOCA01, complete sequence) position: , mismatch: 8, identity: 0.733

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
agtgctcccggacccgccctcgccgtcgcc	Protospacer
. .*.. ***** ***** ***********

137. spacer 22.2|3586592|30|CP012670|CRT matches to CP040467 (Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
ctcctcaccggcgccgccgtcgccgcaccg	Protospacer
 .* ******* *************.  *

138. spacer 22.2|3586592|30|CP012670|CRT matches to NC_019317 (Streptomyces sp. X335 plasmid pDYM4.3k, complete sequence) position: , mismatch: 8, identity: 0.733

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
tacgtcaccggggcggccgtcgccgccaga	Protospacer
  *********.** **********.*.

139. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP034999 (Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence) position: , mismatch: 8, identity: 0.733

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
aactcccgtggagccgccttcgccgtcgcc	Protospacer
. * .*  .********* ***********

140. spacer 22.2|3586592|30|CP012670|CRT matches to NC_047992 (Microbacterium phage Zeta1847, complete genome) position: , mismatch: 8, identity: 0.733

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
cgcgtcgccggagccgccctcgccgatgtt	Protospacer
  ****.*********** ****** .*..

141. spacer 22.2|3586592|30|CP012670|CRT matches to NC_019407 (Caulobacter phage CcrMagneto, complete genome) position: , mismatch: 8, identity: 0.733

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
cccgccaccgcagccgccgtcgccacgcct	Protospacer
 ***.***** *************..  *.

142. spacer 22.2|3586592|30|CP012670|CRT matches to NC_019411 (Caulobacter phage CcrSwift, complete genome) position: , mismatch: 8, identity: 0.733

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
cccgccaccgcagccgccgtcgccacgcct	Protospacer
 ***.***** *************..  *.

143. spacer 32.2|6047734|31|CP012670|CRISPRCasFinder matches to NZ_CP049814 (Monaibacterium sp. ALG8 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.742

agggcacgggcggcgagggcacaggcggtga	CRISPR spacer
cggttttcggcggcgaggtcacaggcgatga	Protospacer
 ** . . ********** ********.***

144. spacer 32.2|6047734|31|CP012670|CRISPRCasFinder matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.742

agggcacgggcggcgagggcacaggcggtga	CRISPR spacer
accgacggggcggcgggggctcaggcggtgc	Protospacer
*  *   ********.**** *********

145. spacer 32.2|6047734|31|CP012670|CRISPRCasFinder matches to MN657146 (Cryobacterium sp. strain ANT_H28B plasmid pA28BH2, complete sequence) position: , mismatch: 8, identity: 0.742

agggcacgggcggcgagggcacaggcggtga	CRISPR spacer
cccgcttgggcggcgagggcgcgggcggtgc	Protospacer
   ** .*************.*.*******

146. spacer 32.2|6047734|31|CP012670|CRISPRCasFinder matches to NZ_CP043619 (Rhodobacteraceae bacterium SH-1 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.742

agggcacgggcggcgagggcacaggcggtga	CRISPR spacer
ggctgacgggcggcgagggaacgggcggcgt	Protospacer
.*   ************** **.*****.*

147. spacer 32.2|6047734|31|CP012670|CRISPRCasFinder matches to NZ_CP040452 (Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

agggcacgggcggcgagggcacaggcggtga	CRISPR spacer
gggctgcgggcagcgagggcgcaggcggttt	Protospacer
.** ..*****.********.********

148. spacer 44.12|9187688|36|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NC_010879 (Burkholderia glumae strain BGR1 plasmid pBGF2, complete sequence) position: , mismatch: 8, identity: 0.778

agcggacgctcgtcgagcaggcgcgccggctgacca	CRISPR spacer
cgccgtggctcgtcgagcacgcgcgccgcctgacgc	Protospacer
 ** *  ************ ******** *****

149. spacer 4.8|403189|37|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to MN693342 (Marine virus AFVG_25M9, complete genome) position: , mismatch: 9, identity: 0.757

cccaaccagccccaccagccccaccagctcgccttgg	CRISPR spacer
caaaaccagcaccaccagcaccaccagctcttgctgt	Protospacer
*  ******* ******** ********** . .**

150. spacer 6.4|420633|36|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033582 (Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence) position: , mismatch: 9, identity: 0.75

cgcgacgacctcgccgccgtcgaggcccaggcagcg	CRISPR spacer
ctgagcgcggtcgccgccgtcgcgggccaggcagcg	Protospacer
*  ..**   ************ ** **********

151. spacer 6.4|420633|36|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.75

cgcgacgacctcgccgccgtcgaggcccaggcagcg	CRISPR spacer
ggcgacgacctcgccgtcgtagaggccgtcgcgcca	Protospacer
 ***************.*** ******   **. *.

152. spacer 6.4|420633|36|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to MK977696 (Gordonia phage SCentae, complete genome) position: , mismatch: 9, identity: 0.75

cgcgacgacctcgccgccgtcgaggcccaggcagcg	CRISPR spacer
cccgacgaccgcgccgacgtcgaggcccccgtcaag	Protospacer
* ******** ***** ***********  *. . *

153. spacer 6.4|420633|36|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to MK977695 (Gordonia phage Pupper, complete genome) position: , mismatch: 9, identity: 0.75

cgcgacgacctcgccgccgtcgaggcccaggcagcg	CRISPR spacer
cccgacgaccgcgccgacgtcgaggcccccgtcaag	Protospacer
* ******** ***** ***********  *. . *

154. spacer 6.34|422809|35|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.743

gtcgcgctcggggtcgcctcggcgggcgtctcgtt	CRISPR spacer
gtcgcgctcgaggccgcctcggcggcagggccggc	Protospacer
**********.**.***********  *  .** .

155. spacer 6.36|422951|36|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594673 (Variovorax sp. PBL-E5 plasmid 3) position: , mismatch: 9, identity: 0.75

cccttggcgacgtcgacggcgcgccgcgcctgctcg	CRISPR spacer
cggcccacgacgtcggcggcgcggcgcgcctgctcc	Protospacer
*  .. .********.******* ***********

156. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_LR134451 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence) position: , mismatch: 9, identity: 0.71

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
agcgcctcctggcgggtcgcgccggtcacga	Protospacer
.********* *****.*******    *..

157. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 9, identity: 0.71

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
ccgacgacctcccgggccgcgccgcgggcaa	Protospacer
   .*  **** *************** **.

158. spacer 19.1|2162227|31|CP012670|CRISPRCasFinder matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 9, identity: 0.71

ggcgcctcctcgcgggccgcgccgcggtcag	CRISPR spacer
agcgcctcctcgcgcgtcgcgccggtcacga	Protospacer
.************* *.*******    *..

159. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP018784 (Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence) position: , mismatch: 9, identity: 0.7

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
cagctcaccgcagccgccggcgccgtccag	Protospacer
    ****** ******** *******

160. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP015236 (Rhodococcus fascians D188 plasmid pFiD188, complete sequence) position: , mismatch: 9, identity: 0.7

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
caactagccggagccgccgtcgtcgtcgga	Protospacer
    * .***************.*****

161. spacer 22.2|3586592|30|CP012670|CRT matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 9, identity: 0.7

gccgtcaccggagccgccgtcgccgtcgcc	CRISPR spacer
tgcgtcaccggccccgccgtcgccgatctg	Protospacer
  *********  ************ . .

162. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

163. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

164. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

165. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

166. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

167. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

168. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

169. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

170. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

171. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

172. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

173. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

174. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

175. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

176. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

177. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

178. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

179. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

180. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

181. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

182. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

183. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

184. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

185. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

186. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

187. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

188. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

189. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

190. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

191. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

192. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

193. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

194. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

195. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

196. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

197. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

198. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

199. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

200. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

201. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

202. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

203. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

204. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

205. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

206. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

207. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

208. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

209. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

210. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

211. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

212. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

213. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

214. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

215. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

216. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

217. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

218. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

219. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

220. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

221. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

222. spacer 44.2|9186953|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.743

gagcagatccgcgccgccctcccgggtgcctgcgt	CRISPR spacer
gagcagatccgcgccgccatccaggacggcacgct	Protospacer
****************** *** **..* *    *

223. spacer 44.17|9188047|37|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.757

gcgcggccgagctcgcggccgaggaagggatccacgt	CRISPR spacer
gcgcggccgagcgcgcgggcgaggaacaggctcgcga	Protospacer
************ ***** ******* .*...*.**

224. spacer 44.40|9189724|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054620 (Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.743

gccgcatcgccgccgtacacggcggtggaggacct	CRISPR spacer
gccgcatcgccgccctgcacggcggaacagtgaca	Protospacer
************** *.******** . ** . *

225. spacer 44.48|9190302|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.743

--tgggccgatacgtggtacgcctccgtggaggcggc	CRISPR spacer
gccagggca--acgtggtacgcgtccgcggaggcggg	Protospacer
  ..** *.  *********** ****.********

226. spacer 4.4|402894|35|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016891 (Pantoea agglomerans strain C410P1 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.714

tcggagctcgcaggccgcctgttcggccagctcgc	CRISPR spacer
gcgaagctcgccggccgcctgttcggggaagtttt	Protospacer
 **.******* **************  *. *. .

227. spacer 4.8|403189|37|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 10, identity: 0.73

cccaaccagccccaccagccccaccagctcgccttgg	CRISPR spacer
gcacgccagccccaccagcaccaccagcccgatctgc	Protospacer
 *  .************** ********.** ..**

228. spacer 6.36|422951|36|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594669 (Variovorax sp. SRS16 plasmid 4) position: , mismatch: 10, identity: 0.722

cccttggcgacgtcgacggcgcgccgcgcctgctcg	CRISPR spacer
cggcccaccacgtcggcggcgcggcgcgcctgctcc	Protospacer
*  .. .* ******.******* ***********

229. spacer 14.10|1636022|36|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 10, identity: 0.722

tagagataggttcgcttcatgtttcctcgcttgtgt	CRISPR spacer
gcaagacaggttcgcttcatggttcctcgttatcgg	Protospacer
  .***.************** *******.*  .*

230. spacer 14.12|1636168|37|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NC_009426 (Novosphingobium aromaticivorans DSM 12444 plasmid pNL1, complete sequence) position: , mismatch: 10, identity: 0.73

tcagatagcgggtgacgtccgccgcgccgtgctacgc	CRISPR spacer
cgagatagcgggcgacgaccgccgcgccgatcccggt	Protospacer
. **********.**** ***********  *.  *.

231. spacer 14.12|1636168|37|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NC_002033 (Novosphingobium aromaticivorans plasmid pNL1, complete sequence) position: , mismatch: 10, identity: 0.73

tcagatagcgggtgacgtccgccgcgccgtgctacgc	CRISPR spacer
cgagatagcgggcgacgaccgccgcgccgatcccggt	Protospacer
. **********.**** ***********  *.  *.

232. spacer 14.12|1636168|37|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033228 (Sphingobium yanoikuyae strain SJTF8 plasmid pF2, complete sequence) position: , mismatch: 10, identity: 0.73

tcagatagcgggtgacgtccgccgcgccgtgctacgc	CRISPR spacer
cgagatagcgggcgacgaccgccgcgccgatcccggt	Protospacer
. **********.**** ***********  *.  *.

233. spacer 15.4|1639332|35|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594673 (Variovorax sp. PBL-E5 plasmid 3) position: , mismatch: 10, identity: 0.714

gcggggtcaggcgccgccggccgcgcgattctcag	CRISPR spacer
accaccttgagcgccgccggccgcgcgatgttcag	Protospacer
.* .  *...******************* .****

234. spacer 15.4|1639332|35|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594669 (Variovorax sp. SRS16 plasmid 4) position: , mismatch: 10, identity: 0.714

gcggggtcaggcgccgccggccgcgcgattctcag	CRISPR spacer
accaccttgagcgccgccggccgcgcgatgttcag	Protospacer
.* .  *...******************* .****

235. spacer 32.2|6047734|31|CP012670|CRISPRCasFinder matches to NZ_CP023740 (Methylosinus trichosporium OB3b plasmid pOB3b3, complete sequence) position: , mismatch: 10, identity: 0.677

agggcacgggcggcgagggcacaggcggtga	CRISPR spacer
gcttcacgcgcggcgagggcgcaggcgtgct	Protospacer
.   **** ***********.******

236. spacer 33.1|6118239|34|CP012670|CRISPRCasFinder matches to NZ_CP016289 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.706

gccgagcccgggctttggcgccgcggcctgggtc	CRISPR spacer
cactagcccgggctctggcgccccggccgagtgt	Protospacer
  * **********.******* ***** .*  .

237. spacer 44.7|9187320|38|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 10, identity: 0.737

tggctcgacccgtgcgccaatgagcgccagcggggtat	CRISPR spacer
ctcccggaccagtgcgccaatgagcggcagcgggtcag	Protospacer
.  *. **** *************** ******* .*

238. spacer 44.11|9187615|37|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019608 (Tessaracoccus flavescens strain SST-39T plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

ccctcttcg-----ctcaccagcacgatcgcctcgagcatcc	CRISPR spacer
-----gtcgagagcatcaccaccacgatcgcctggagcatct	Protospacer
      ***      ****** *********** *******.

239. spacer 44.21|9188338|38|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011046 (Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid pCI3, complete sequence) position: , mismatch: 10, identity: 0.737

aatcacatcgcagagcttgcggcggcagcagccgaccg	CRISPR spacer
gagccgttcgcggagcgtgcggcggcagcagccgcgct	Protospacer
.* *   ****.**** *****************  *

240. spacer 44.21|9188338|38|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021037 (Clavibacter michiganensis subsp. insidiosus strain R1-3 plasmid pCI3, complete sequence) position: , mismatch: 10, identity: 0.737

aatcacatcgcagagcttgcggcggcagcagccgaccg	CRISPR spacer
gagccgttcgcggagcgtgcggcggcagcagccgcgct	Protospacer
.* *   ****.**** *****************  *

241. spacer 44.25|9188630|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018821 (Sphingomonas koreensis strain ABOJV plasmid tig00000001, complete sequence) position: , mismatch: 10, identity: 0.714

atctcctcctcgtccgccgacgcgacgttcgccgt	CRISPR spacer
tatgactggtcgttcgccgacgagacgttcgccga	Protospacer
  .  **  ****.******** ***********

242. spacer 44.25|9188630|35|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to CP006583 (Mesorhizobium huakuii 7653R plasmid pMHb, complete sequence) position: , mismatch: 10, identity: 0.714

atctcctcctcgtccgccgacgcgacgttcgccgt	CRISPR spacer
ggtcatttctcgtccgccggcgcgacgctcgccat	Protospacer
. .. .*.***********.*******.*****.*

243. spacer 4.8|403189|37|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026517 (Deinococcus sp. NW-56 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.703

cccaaccagccccaccagccccaccagctcgccttgg	CRISPR spacer
cggctccagccccacgagccccagcagctcgtccacc	Protospacer
*    ********** ******* *******.*.

244. spacer 15.4|1639332|35|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.686

gcggggtcaggcgccgccggccgcgcgattctcag	CRISPR spacer
acgcggtcaggcgccgctggccgcgcgccatgggc	Protospacer
.** *************.********* . .  .

245. spacer 27.2|4742862|32|CP012670|CRISPRCasFinder matches to NZ_CP018229 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

ttcccctcgcggtcgcgccacctcccctcaca	CRISPR spacer
cgggtttcgcggctgcgccacctcccctcggc	Protospacer
.   ..******..***************.

246. spacer 27.2|4742862|32|CP012670|CRISPRCasFinder matches to NZ_CP054032 (Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence) position: , mismatch: 11, identity: 0.656

ttcccctcgcggtcgcgccacctcccctcaca	CRISPR spacer
cgggtttcgcggctgcgccacctcccctcggc	Protospacer
.   ..******..***************.

247. spacer 44.44|9190010|37|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006987 (Rhizobium sp. IE4771 plasmid pRetIE4771a, complete sequence) position: , mismatch: 11, identity: 0.703

ggcggcgttcgggatcaacgagcccccgatcggcggc	CRISPR spacer
tcaagcgttcgggatcaacgtgcccctgatgctcacc	Protospacer
   .**************** *****.***   *. *

248. spacer 44.17|9188047|37|CP012670|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007796 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence) position: , mismatch: 12, identity: 0.676

gcgcggccgagctcgcggccgaggaagggatccacgt	CRISPR spacer
aagcggccgaggtcgcggccgtggaaggtgatgcggc	Protospacer
. ********* ********* ****** . .   *.

249. spacer 4.9|403262|38|CP012670|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050100 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b3, complete sequence) position: , mismatch: 13, identity: 0.658

acgtacgccgccgccttctcgtcgttgctgggcttctt	CRISPR spacer
cgctacgccgccgccttctcgccggtgctgccgccgcc	Protospacer
   ******************.** *****   .. ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1618996 : 1641495

Gordonia_phage(66.67%)

integrase,transposase

attL 1639071:1639110|attR 1641587:1641626

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AUX20765.1\|1618996_1620217_+\|transposase	transposase	NA	NA	NA	NA
AUX20766.1\|1620575_1620977_+	glyoxalase	NA	NA	NA	NA
AUX20767.1\|1621069_1622107_-	hypothetical protein	NA	NA	NA	NA
AUX20768.1\|1622715_1623732_-	hypothetical protein	NA	NA	NA	NA
AUX20769.1\|1624293_1625262_-	hypothetical protein	NA	NA	NA	NA
AUX20770.1\|1625563_1628440_-	uncharacterized protein	NA	NA	NA	NA
AUX20771.1\|1628963_1629374_+	glyoxalase	NA	NA	NA	NA
AUX20772.1\|1629404_1629863_-	thioredoxin	A0A1J0GW78	Streptomyces_phage	3.9e-10	36.0
AUX20773.1\|1630008_1630251_+	uncharacterized protein	NA	NA	NA	NA
AUX20774.1\|1630333_1630804_-	cyclase/dehydrase	NA	NA	NA	NA
AUX20775.1\|1631199_1631601_+	uncharacterized protein	NA	NA	NA	NA
AUX20776.1\|1632102_1632558_+	uncharacterized protein	NA	NA	NA	NA
AUX20777.1\|1632557_1633694_+\|integrase	integrase	A0A1B3AZE5	Gordonia_phage	4.9e-09	27.9
AUX20778.1\|1633736_1634897_-\|integrase	integrase	NA	NA	NA	NA
AUX20779.1\|1636747_1637848_+	uncharacterized protein	NA	NA	NA	NA
AUX20780.1\|1637927_1638299_-\|transposase	transposase	NA	NA	NA	NA
AUX20781.1\|1638295_1638730_-\|transposase	transposase	NA	NA	NA	NA
AUX20782.1\|1638542_1638743_+	uncharacterized protein	NA	NA	NA	NA
AUX20783.1\|1638755_1639055_+	uncharacterized protein	NA	NA	NA	NA
1639071:1639110	attL	NA	NA	NA	NA
AUX20784.1\|1640002_1640362_+	hypothetical protein	NA	NA	NA	NA
AUX20785.1\|1640361_1641495_+\|integrase	integrase	A0A1B3AZE5	Gordonia_phage	4.5e-07	27.1
1641587:1641626	attR	NA	NA	NA	NA

DBSCAN-SWA_2

7433530 : 7458774

Brevibacillus_phage(25.0%)

transposase,integrase

attL 7424388:7424415|attR 7463568:7463595

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
7424388:7424415	attL	NA	NA	NA	NA
AUX25139.1\|7433530_7434595_-\|integrase	integrase	S5MNZ2	Brevibacillus_phage	2.2e-19	26.5
AUX25140.1\|7434601_7434796_-	uncharacterized protein	NA	NA	NA	NA
AUX25141.1\|7434792_7436013_-\|transposase	transposase	NA	NA	NA	NA
AUX25142.1\|7436312_7436726_-	single-stranded DNA-binding protein	R9TR60	Vibrio_phage	5.6e-24	42.8
AUX25143.1\|7436763_7437510_-	uncharacterized protein	NA	NA	NA	NA
AUX25144.1\|7437544_7438192_+	uncharacterized protein	A0A0U4K134	Arthrobacter_phage	4.1e-13	32.1
AUX25145.1\|7438188_7439574_+	uncharacterized protein	NA	NA	NA	NA
AUX25146.1\|7439563_7440709_+	uncharacterized protein	NA	NA	NA	NA
AUX25147.1\|7440712_7441150_+	uncharacterized protein	J9RWG0	Pseudomonas_phage	1.9e-06	37.0
AUX25148.1\|7441151_7442156_+	uncharacterized protein	NA	NA	NA	NA
AUX25149.1\|7442233_7442704_+	uncharacterized protein	NA	NA	NA	NA
AUX25150.1\|7442693_7443104_+	uncharacterized protein	NA	NA	NA	NA
AUX25151.1\|7443100_7443637_+	uncharacterized protein	NA	NA	NA	NA
AUX25152.1\|7443637_7445095_+	uncharacterized protein	NA	NA	NA	NA
AUX25153.1\|7445098_7445599_+	uncharacterized protein	NA	NA	NA	NA
AUX25154.1\|7445601_7446117_+	uncharacterized protein	NA	NA	NA	NA
AUX25155.1\|7446320_7447577_+	uncharacterized protein	NA	NA	NA	NA
AUX25156.1\|7447459_7448680_-\|transposase	transposase	NA	NA	NA	NA
AUX25157.1\|7448980_7449790_+	uncharacterized protein	NA	NA	NA	NA
AUX25158.1\|7449786_7450350_+	uncharacterized protein	NA	NA	NA	NA
AUX25159.1\|7450349_7451027_+	uncharacterized protein	NA	NA	NA	NA
AUX25160.1\|7451023_7451533_+	uncharacterized protein	NA	NA	NA	NA
AUX25161.1\|7451529_7451985_+	uncharacterized protein	NA	NA	NA	NA
AUX25162.1\|7451981_7453145_+	uncharacterized protein	NA	NA	NA	NA
AUX25163.1\|7453396_7454617_-\|transposase	transposase	NA	NA	NA	NA
AUX25164.1\|7454613_7455531_-	uncharacterized protein	NA	NA	NA	NA
AUX25165.1\|7455587_7456397_+	uncharacterized protein	NA	NA	NA	NA
AUX25166.1\|7456399_7456978_+	uncharacterized protein	NA	NA	NA	NA
AUX25167.1\|7456980_7457436_+	uncharacterized protein	NA	NA	NA	NA
AUX25168.1\|7457971_7458343_-\|transposase	transposase	NA	NA	NA	NA
AUX25169.1\|7458339_7458774_-\|transposase	transposase	NA	NA	NA	NA
7463568:7463595	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP012670

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CRISPR-Cas detection and classification

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