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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP030936 Salmonella enterica subsp. enterica serovar Typhi strain LXYSH chromosome, complete genome 0 crisprs WYL,DEDDh,RT,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,cas3,c2c9_V-U4,DinG 0 0 13 0

Results visualization

1. CP030936
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 184321 : 262521 100 Salmonella_phage(71.21%) transposase,holin,terminase,protease,tail,head NA
DBSCAN-SWA_2 333646 : 340958 8 Ralstonia_phage(16.67%) protease,integrase attL 328515:328529|attR 339694:339708
DBSCAN-SWA_3 964332 : 1040715 60 Salmonella_phage(42.11%) plate,tRNA,tail NA
DBSCAN-SWA_4 1358137 : 1401840 51 Bacillus_virus(25.0%) bacteriocin,protease,transposase,tRNA NA
DBSCAN-SWA_5 2341235 : 2432987 87 Salmonella_phage(64.15%) transposase,integrase,capsid,plate,portal,tRNA,tail,lysis,head attL 2330735:2330749|attR 2433787:2433801
DBSCAN-SWA_6 2700352 : 2794025 111 Salmonella_phage(82.0%) integrase,capsid,plate,portal,tail,lysis,head attL 2701525:2701541|attR 2799255:2799271
DBSCAN-SWA_7 2946200 : 2955965 11 Enterobacteria_phage(50.0%) capsid NA
DBSCAN-SWA_8 3612260 : 3618291 6 Salmonella_virus(50.0%) NA NA
DBSCAN-SWA_9 3852800 : 3861971 10 Enterobacteria_phage(66.67%) tRNA NA
DBSCAN-SWA_10 3937863 : 3948370 10 Enterobacteria_phage(37.5%) NA NA
DBSCAN-SWA_11 4032165 : 4039399 9 Morganella_phage(33.33%) NA NA
DBSCAN-SWA_12 4243328 : 4247740 6 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_13 4428780 : 4502347 88 Burkholderia_virus(40.0%) integrase,transposase,protease,plate,tRNA,tail,head attL 4468241:4468257|attR 4501255:4501271
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage