CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP030136	Staphylococcus aureus strain S57 chromosome, complete genome	4 crisprs	WYL,csa3,DEDDh,cas3,DinG	2	3	13	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP030136_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP030136_3

589325-589415

Orphan

Consensus_repeat	Method
AAGAAGCCCCTAACAACTAAAGTTG	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of CP030136_3

>merge|CP030136|3|589325-589415|CRISPRCasFinder
AAGAAGCCCCTAACAACTAAAGTTGAAAAATAGAGGAACACAGTTGGATGCTACGCATCAACTGCATAAGAGCCCCTAACAACTAAAGTTG

>CP030136|3|2|589325-589415|CRISPRCasFinder
AAGAAGCCCCTAACAACTAAAGTTG	AAAAATAGAGGAACACAGTTGGATGCTACGCATCAACTGCA
TAAGAGCCCCTAACAACTAAAGTTG

Protein	Signature genes	Signature genes Name	Protein_function
CP030136.1\|QAZ52974.1\|585682_586465_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224044
CP030136.1\|QAZ52980.1\|589431_590523_-\|transcriptional-regulator	unknown	unknown	unknown
CP030136.1\|QAZ52988.1\|597657_598101_+\|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl\|CDD\|223854
CP030136.1\|QAZ52971.1\|579259_581392_-\|PRD-domain-containing-protein	unknown	unknown	gnl\|CDD\|226234
CP030136.1\|QAZ52985.1\|594312_594543_+\|hypothetical-protein	unknown	unknown	unknown
CP030136.1\|QAZ52981.1\|590788_591769_-\|cation-transporter	unknown	unknown	gnl\|CDD\|224151
CP030136.1\|QAZ52977.1\|588047_588206_-\|integrase	unknown	unknown	unknown
CP030136.1\|QAZ52973.1\|583645_585451_+\|glutamine--fructose-6-phosphate-aminotransferase	unknown	unknown	gnl\|CDD\|234729
CP030136.1\|QAZ52972.1\|581426_582965_-\|PTS-mannitol-transporter-subunit-IICBA	unknown	unknown	gnl\|CDD\|225123
CP030136.1\|QAZ52989.1\|598221_598932_-\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275
CP030136.1\|QAZ52987.1\|597044_597458_+\|thiol-disulfide-oxidoreductase-DCC-family-protein	unknown	unknown	gnl\|CDD\|225556
CP030136.1\|QAZ52976.1\|587519_587612_-\|erm-Leader-peptide	unknown	unknown	unknown
CP030136.1\|QAZ52979.1\|588885_588990_+\|hypothetical-protein	unknown	unknown	unknown
CP030136.1\|QAZ52970.1\|578813_579248_-\|mannitol-specific-phosphotransferase-enzyme-IIA-component	unknown	unknown	gnl\|CDD\|227014
CP030136.1\|QAZ52983.1\|592242_592908_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|187554
CP030136.1\|QAZ52975.1\|586532_587390_+\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|223635
CP030136.1\|QAZ52986.1\|595214_596588_+\|EVE-domain-containing-protein	unknown	unknown	gnl\|CDD\|376640
CP030136.1\|QAZ52982.1\|591770_592091_-\|ArsR-family-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
CP030136.1\|QAZ52984.1\|593343_594282_+\|class-I-mannose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|224399
CP030136.1\|QAZ52978.1\|588270_588453_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP030136.1\|QAZ52974.1\|585682_586465_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224044	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism].	1.03129e-105
CP030136.1\|QAZ52981.1\|590788_591769_-\|cation-transporter	gnl\|CDD\|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	1.20197e-108
CP030136.1\|QAZ52988.1\|597657_598101_+\|DNA-starvation/stationary-phase-protection-protein	gnl\|CDD\|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	1.22744e-67
CP030136.1\|QAZ52971.1\|579259_581392_-\|PRD-domain-containing-protein	gnl\|CDD\|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	5.17174e-68
CP030136.1\|QAZ52973.1\|583645_585451_+\|glutamine--fructose-6-phosphate-aminotransferase	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
CP030136.1\|QAZ52972.1\|581426_582965_-\|PTS-mannitol-transporter-subunit-IICBA	gnl\|CDD\|225123	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism].	0
CP030136.1\|QAZ52989.1\|598221_598932_-\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	2.10672e-157
CP030136.1\|QAZ52987.1\|597044_597458_+\|thiol-disulfide-oxidoreductase-DCC-family-protein	gnl\|CDD\|225556	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function prediction only].	7.90322e-46
CP030136.1\|QAZ52970.1\|578813_579248_-\|mannitol-specific-phosphotransferase-enzyme-IIA-component	gnl\|CDD\|227014	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism].	2.08822e-62
CP030136.1\|QAZ52983.1\|592242_592908_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|187554	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5. This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.27122e-47
CP030136.1\|QAZ52975.1\|586532_587390_+\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|223635	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only].	5.00207e-59
CP030136.1\|QAZ52986.1\|595214_596588_+\|EVE-domain-containing-protein	gnl\|CDD\|376640	pfam01878, EVE, EVE domain. This domain was formerly known as DUF55. Crystal structures have shown that this domain is part of the PUA superfamily. This domain has been named EVE and is thought to be RNA-binding.	3.86989e-06
CP030136.1\|QAZ52982.1\|591770_592091_-\|ArsR-family-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.8473e-17
CP030136.1\|QAZ52984.1\|593343_594282_+\|class-I-mannose-6-phosphate-isomerase	gnl\|CDD\|224399	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism].	7.24075e-129

>CP030136.1|QAZ52979.1|588885_588990_+|hypothetical-protein
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK
>CP030136.1|QAZ52978.1|588270_588453_+|hypothetical-protein
MIIFRFKVNAFFPVKLCLMIRFCLESCCIFRRHLLITFHNIRSKFIMFKYISSKCIICTG
>CP030136.1|QAZ52977.1|588047_588206_-|integrase
MSKSSDALFNSLTQSFELIEGVYNELVTDNLKIVMYKPRKESTSGRINRRFK
>CP030136.1|QAZ52976.1|587519_587612_-|erm-Leader-peptide
MTYGSIVAILCALFVIFFIPYMEKKDKKKK
>CP030136.1|QAZ52975.1|586532_587390_+|Cof-type-HAD-IIB-family-hydrolase
MDNVKAIFLDMDGTILHENNQASTYTKDVINQLREKGYKVFLATGRSHSEIHQLVPQDFAVNGIISSNGTIGEVDGEIIFKHGLSLAQVQQITNLAKRQQIYYEVFPFEGNRVSLKEDETWMRDMIRSQDPINGVSHSEWSSRQDALAGKIDWVTKFPEGEYSKIYLFSSNLEKITTFRDELKQNHVQLQISVSNSSRFNAETMAYQTDKGTGIKEMIEHFGIHQDETLVIGDSDNDRAMFEFGHYTVAMKNARPEIQALTSDVTAYTNEEDGAAKYLAKHFLAD
>CP030136.1|QAZ52974.1|585682_586465_+|ABC-transporter-ATP-binding-protein
MLIQLDQIGRMKQGKTILKNISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATSGTVNLFGKMPGKVGYSAETVRQHIGFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDEEVRNEAHQLLKLVGMSAKAQQYIGYLSTGEKQRVMIARALMGQPQVLILDEPAAGLDFIARELLLSILDSLSDSYPMLAMIYVTHFIEEITSNFTKILLLKDGESVQQGLIDDILTSENMSRFFQKNVAVQRWNNRFSMAMLE
>CP030136.1|QAZ52973.1|583645_585451_+|glutamine--fructose-6-phosphate-aminotransferase
MCGIVGYIGYDNAKELLLKGLEKLEYRGYDSAGIAVVNDDNTTVFKEKGRIAELRKVADSSDFDGPVGIGHTRWATHGVPNHENSHPHQSSNGRFTLVHNGVIENYEELKGEYLQGVSFISETDTEVIVQLVEYFSNQGLSTEEAFTKVVSLLHGSYALGLLDAEDKDTIYVAKNKSPLLLGVGEGFNVIASDALAMLQVTSEYKEIHDHEIVIVKKDEVIIKDADGNVVERDSYIAEIDASDAEKGVYAHYMLKEIHEQPAVMRRIIQEYQDAEGNLKIDQDIINDVKEADRIYVIAAGTSYHAGLVGKEFLEKWAGVPTEVHVASEFVYNMPLLSEKPLFVYISQSGETADSRAVLVETNKLGHKSLTITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAKEHGREADIDLLRELAKVTTAIEAIVDDAPIMEQIATDFLETTRNAFFIGRTIDYNVSLEGALKLKEISYIQAEGFAGGELKHGTIALIEDGTPVVALATQENVNLSIRGNVKEVVARGAHPCIISMEGLEKEGDTYVIPHVHELLTPLVSVVALQLISYYAALHRDLDVDKPRNLAKSVTVE
>CP030136.1|QAZ52972.1|581426_582965_-|PTS-mannitol-transporter-subunit-IICBA
MSQTEEKKGIGRRVQAFGSFLSSMIMPNIGAFIAWGFIAAIFIDNGWLPNKDLATLAGPMITYLIPLLIAFSGGRLIYDLRGGIIAATATMGVIVALPDTPMLLGAMIMGPLVGWLMKKTDQLIQPRTPQGFEMLFNNFSAGILGFIMTIAGFKILAPLMKFIMHILSVAVEALVHAHLLPLVSILVEPAKIVFLNNAINHGVFTPLGADQAAKAGQSILYTIESNPGPGLGILLAYMIFGKGTAKATSYSAGIIHFLGGIHEIYFPYVLMRPLLFIAVILGGMTGVATYQATGFGFKSPASPGSFIVYCLNAPRGEFLHMLLGVFLAALVSFVVAALIMKFTREPKQDLEAATAQMENTKGKKSSVASKLVSSDKNVNTEENASGNVSETSSSDDDPEALLDNYNTEDVDAHNYNNINHVIFACDAGMGSSAMGASMLRNKFKKAGINDITVTNTAINQLPKDAQLVITQKKLTDRAIKQTPNAIHISVDNFLNSPRYEELLNNLKKDDQA
>CP030136.1|QAZ52971.1|579259_581392_-|PRD-domain-containing-protein
MLLSTREKEMIALLIKYHGQYITIHDIAQQLAVSSRTIHRELKGVEAYLTSFSLTLERANKKGLRIAGADSDLNDLKQSIAQHQTIDLSVEEQKVIIIYALIQAKEPVKQYSLAQEIGVSVQTLAKMLDDLELDLNKYQLSLSRKRGEGIYLVGTESKKREFLSQLMVNNLNSTSVYSVIENHFVFHSLNQIHKDFVDLERIFNVERLLMDYLSALPYQLTESSYLTLTVHIVLSISRIKNGEYVALNDDIYDSVQNTFEHKVASELADKLGQIYDVTFNQAEIAFITIHLRGAKRKNLNDTSLNNRCEENKIKAFVNKVEMISGMTFADLDTLVDGLTLHLNPAINRLQANIETYNPLTDMIKFKYPRLFENVRLALNDCWPDLIFPESEIAFIVLHFGGSIKNQGNRFLNILVVCSSGMGTSRLLSTRLEQVFSEIERITQASVSDLKSLDLSQYDGIISTVNLDIDSPYLTVNPLLPDSDISYVAQFLNTKSTFQETHDKSSNMIDKDDVHVETKDVDGNTSFENEQTSYLTSVFEKHLSDEKSEQLMHHMRSGLTLLDSVKIVSTEVKQWQTYIADYLYQCDVINDPTSFAELLEQRLIDNPGWILSPYPVAIPHLRDNMIKHPMILITVLEEPLTLPSIQNDNQTIKYMISMFIPDNDFMASLVSDLSEFLSLKLESIDTFMENPQELETLLRNKFLERIKKQFI
>CP030136.1|QAZ52970.1|578813_579248_-|mannitol-specific-phosphotransferase-enzyme-IIA-component
MSELFSNDNIFLNVNVNSQNEAIEKAGKALVDSGAVTDAYIQAMKDREQVVSTFMGNGLAIPHGTDEAKTNVIHSGLTLLQIPEGVDWDGEVVKVVVGIAGKDGEHLDLLSKIAITFSEEENVDRIVQAKSAEEIKQVFEEADA
>CP030136.1|QAZ52980.1|589431_590523_-|transcriptional-regulator
MFTYFKSAFKNAKPQLLITLIYALIAFAVIAVVYLLANFQLAKYVQTIAIYSQFGQKPPVDAYLKVIAVLLIAAVVSLFVLVQIFIGITNVMKRAMSHEKVKFTDLFIAFKKGNYLKSVLIGLVSIAMIIVLSLLTSLLYKLFSPVSEMIMNSVQSSYADSTHLIGIAITTQSIIIIVVLLIKAIITWLLLIPIFNFMTSFVESTNDKVKTHLANGFKAMKNGQKTFFKFFIGILLLNLIIILFKTPVGYLISFNTQSLSQSVAENIIRVYTVMTIILFVVIHAIILMGIVQYYLKRGQKITKDKVKTADKNKKVVTEPKNTKVENDKETTSVETKTEKAQDSLNDNTTKTMTSDKPEDNQPK
>CP030136.1|QAZ52981.1|590788_591769_-|cation-transporter
MSHSHHHHDHMHSHVTTNNKKVLFISFLIIGLYMFIEIIGGLLANSLALLSDGIHMFSDTFSLGVALVAFIYAEKNATTTKTFGYKRFEVLAALFNGVTLFVISILIVFEAIKRFFVPSEVQSKEMLIISIIGLIVNIVVAFFMFKGGDTSHNLNMRGAFLHVIGDLLGSVGAITAAILIWAFGWTIADPIASILVSVIILKSAWGITKSSINILMEGTPSDVDIDEVITTIKKDSRIQSVHDCHVWTISNDMNALSCHVVVDHTLTMKECELLLENIEHDLLHLNIHHMTIQLETPNHKHDESIICSGTHSHSHNHHAHHHAHAH
>CP030136.1|QAZ52982.1|591770_592091_-|ArsR-family-transcriptional-regulator
MSEQYSEINTDTLERVTEIFKALGDYNRIRIMELLSVSEASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIHVATMLKQAIHHANHPKESGL
>CP030136.1|QAZ52983.1|592242_592908_+|SDR-family-NAD(P)-dependent-oxidoreductase
MNILVIGANGGVGSLLVQQLAKENVPFTAGVRQSDQLNALKSQGMKAILVDVENDSIETLTETFKPFDKVIFSVGSGGNTGADKTIIVDLDGAVKSMIASKEANIKHYVMVSTYDSRRQAFDDSGDLKPYTIAKHYADDYLRRSGLNYTILHPGALTNAAGSGKIEAAQYFDGKGEIPREDVATVLKEIVTSNHFNHQEFQIISGEQDIKDALTQFEIEKD
>CP030136.1|QAZ52984.1|593343_594282_+|class-I-mannose-6-phosphate-isomerase
MPLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRIWSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAEEDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEFYFIPAGTVHTISSGILAYETMQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVSNDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSEDLDSVFEGDFTLMISYV
>CP030136.1|QAZ52985.1|594312_594543_+|hypothetical-protein
MKQFLYIALVCGVIAGLGAFLHIPQYPSMTIPRIVAILGIISAMLTFKDKQISASLKFSALLINVLPLCGTFVASN
>CP030136.1|QAZ52986.1|595214_596588_+|EVE-domain-containing-protein
MTAETNYFWLNCGYNRWNHNEPLVGQTALFESGAHFNPSQGFRAFKKAKVGDQVIFYQVQTDTGLLGCGEIISVETGAQNKIRVQFRFNEQLKPLTADYLKRSEALEFRMSNMKETLFNQITAEEFDLISGLGKGEIKIPRYFFLAETEEFEPGNQYTIYTHTYNGIKRNGYHFYTQLEEGDNIIFYNRTKNQSVVGIGEVSKHIHEKPPIPGRTNSTVIEVSYEKDITPITLSTLNKHPKLKNLYFLQENAKQAIASMSQAQYDAIIEMSDNNGLKSPFEMVQKPDMLESEKEEALKPFILLVVDRKEEGLKAANDLLQKANANPVITTGHPDFSEDMLYGKYLPNETGALYYREGFITQLMPKKDKSYLVIDNFNRIDTDIFQTYINVLEGYEVTLPRYNKDGNMIKWSRQKDSFYYFNPNWHIVGITYDSLEEIKEKYSEQFLKYTRIVKVKHD
>CP030136.1|QAZ52987.1|597044_597458_+|thiol-disulfide-oxidoreductase-DCC-family-protein
MTIVYYDGNCIYCYNYVIWLIQHDLPRNYQFATLKGEVGQQFFKQHPEAANKNSVILQKGDRIYFESQAIIKLITALPNRTKLLGVGLWLVPKPVRNFGYRMFANNRNRMWKTTWHQPNDYEKSFFLDDNAKVKLTD
>CP030136.1|QAZ52988.1|597657_598101_+|DNA-starvation/stationary-phase-protection-protein
MSNQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQSIVKEAAKGYSAEQMVEELSQDFTNISKQLENAIEIAGNAGDDVSEDMFIGMQTSVDKHNWMFKSYLS
>CP030136.1|QAZ52989.1|598221_598932_-|purine-nucleoside-phosphorylase
MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFNDVRNMFGYTGTYKGKEVSVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVDQYNIPGHFAPIADFELVTKAKNVADQIGATTHVGNVLSSDTFYNADPTFNDAWKKMGILGIEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPEERQNSFTQMMEIALEIAE

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Crispr_ID: CP030136_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP030136_4

717378-717467

Orphan

Consensus_repeat	Method
TGATTGAGAAGTCAGTCGAAAAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP030136_4

>merge|CP030136|4|717378-717467|CRISPRCasFinder
TGATTGAGAAGTCAGTCGAAAAACTATTGCAAAAGAAAAACGATTATGTATAATAAAGTTATAAATTGATTGAGAAGTCAGTCAAAAACG

>CP030136|4|3|717378-717467|CRISPRCasFinder
TGATTGAGAAGTCAGTCGAAAAAC	TATTGCAAAAGAAAAACGATTATGTATAATAAAGTTATAAAT
TGATTGAGAAGTCAGTCAAAAACG

Protein	Signature genes	Signature genes Name	Protein_function
CP030136.1\|QAZ53097.1\|710380_711007_-\|nitroreductase-family-protein	unknown	unknown	gnl\|CDD\|226090
CP030136.1\|QAZ53112.1\|721798_722143_+\|pathogenicity-island-protein	unknown	unknown	unknown
CP030136.1\|QAZ53095.1\|708503_708638_+\|delta-lysin-family-phenol-soluble-modulin	unknown	unknown	gnl\|CDD\|173213
CP030136.1\|QAZ53096.1\|709234_710020_-\|carbon-nitrogen-family-hydrolase	unknown	unknown	gnl\|CDD\|143607
CP030136.1\|QAZ53098.1\|711203_712463_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236768
CP030136.1\|QAZ53113.1\|722367_722574_+\|hypothetical-protein	unknown	unknown	unknown
CP030136.1\|QAZ53102.1\|715450_716623_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
CP030136.1\|QAZ53107.1\|718160_718364_+\|pathogenicity-island-protein	unknown	unknown	unknown
CP030136.1\|QAZ53110.1\|719157_720027_+\|mobile-element-associated-protein	unknown	unknown	gnl\|CDD\|214926
CP030136.1\|QAZ53099.1\|712487_713231_-\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
CP030136.1\|QAZ53103.1\|716636_717311_-\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379188
CP030136.1\|QAZ53111.1\|720043_721513_+\|virulence-associated-protein-E	unknown	unknown	gnl\|CDD\|283041
CP030136.1\|QAZ53100.1\|713405_713690_+\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
CP030136.1\|QAZ53105.1\|717706_718024_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|200128
CP030136.1\|QAZ53094.1\|707704_708268_-\|accessory-gene-regulator-AgrB	unknown	unknown	gnl\|CDD\|226899
CP030136.1\|QAZ53101.1\|713765_715382_+\|molecular-chaperone-GroEL	unknown	unknown	gnl\|CDD\|234573
CP030136.1\|QAZ53109.1\|718776_719070_+\|pathogenicity-island-protein	unknown	unknown	gnl\|CDD\|369323
CP030136.1\|QAZ53106.1\|718020_718176_+\|pathogenicity-island-protein	unknown	unknown	unknown
CP030136.1\|QAZ53108.1\|718365_718776_+\|pathogenicity-island-protein	unknown	unknown	unknown
CP030136.1\|QAZ53104.1\|717483_717702_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775

Protein	Function_ID	Function_description	E-value
CP030136.1\|QAZ53097.1\|710380_711007_-\|nitroreductase-family-protein	gnl\|CDD\|226090	COG3560, FMR2, Predicted oxidoreductase related to nitroreductase [General function prediction only].	5.71771e-116
CP030136.1\|QAZ53095.1\|708503_708638_+\|delta-lysin-family-phenol-soluble-modulin	gnl\|CDD\|173213	PRK14752, PRK14752, delta-lysin family phenol-soluble modulin.	8.25732e-15
CP030136.1\|QAZ53096.1\|709234_710020_-\|carbon-nitrogen-family-hydrolase	gnl\|CDD\|143607	cd07583, nitrilase_5, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.	7.8671e-127
CP030136.1\|QAZ53098.1\|711203_712463_+\|hypothetical-protein	gnl\|CDD\|236768	PRK10819, PRK10819, transport protein TonB; Provisional.	1.83481e-10
CP030136.1\|QAZ53102.1\|715450_716623_-\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.39756e-47
CP030136.1\|QAZ53110.1\|719157_720027_+\|mobile-element-associated-protein	gnl\|CDD\|214926	smart00942, PriCT_1, Primase C terminal 1 (PriCT-1). This alpha helical domain is found at the C terminal of primases.	1.5468e-15
CP030136.1\|QAZ53099.1\|712487_713231_-\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	1.67124e-11
CP030136.1\|QAZ53103.1\|716636_717311_-\|XRE-family-transcriptional-regulator	gnl\|CDD\|379188	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain. This is a helix-turn-helix domain that probably binds to DNA.	1.33612e-10
CP030136.1\|QAZ53100.1\|713405_713690_+\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	5.94304e-45
CP030136.1\|QAZ53105.1\|717706_718024_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|200128	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376). [Unknown function, General].	5.89089e-17
CP030136.1\|QAZ53094.1\|707704_708268_-\|accessory-gene-regulator-AgrB	gnl\|CDD\|226899	COG4512, AgrB, Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide [Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms / Transcription].	6.65966e-71
CP030136.1\|QAZ53101.1\|713765_715382_+\|molecular-chaperone-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
CP030136.1\|QAZ53109.1\|718776_719070_+\|pathogenicity-island-protein	gnl\|CDD\|369323	pfam07342, DUF1474, Protein of unknown function (DUF1474). This family consists of several bacterial proteins of around 100 residues in length. Members of this family seem to be found exclusively in Staphylococcus aureus. The function of this family is unknown.	8.16808e-27
CP030136.1\|QAZ53111.1\|720043_721513_+\|virulence-associated-protein-E	gnl\|CDD\|283041	pfam05272, VirE, Virulence-associated protein E. This family contains several bacterial virulence-associated protein E like proteins. These proteins contain a P-loop motif.	3.32703e-78
CP030136.1\|QAZ53104.1\|717483_717702_+\|transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	1.25915e-10

>CP030136.1|QAZ53103.1|716636_717311_-|XRE-family-transcriptional-regulator
MIRNRLSELLSERGLKISRVAKDVKIARSSLTSMAQNDSEMIRYDAIDKLCSYLHISPSEFFEHNPINFDFTFDEEPNYKINDVFEGFEVTANITHAFSIENFDFEILVDVELDNRQKLNFDLDVSYKETEKITNSQHRFIFTIKNEDENIGLKKYVDSLSAGLKNLLFKKINQKLSGYVSEIIVKNIDDIEELFPNKGEKSTTLHKEILQTDSRLSSGIFKEY
>CP030136.1|QAZ53102.1|715450_716623_-|site-specific-integrase
MASYEKRGNTWRYRISLGKDAETGKYKYISNSGFKRKSDAKHHAEMVERQLRNGDYIAPSTSTFKQVADDWISQYANEVKVSSVRAREKAINHAIERFNNKPIQTINKHEYQRFVNDISAQYSKNYVDSIIASTNMIFKYAYDMKLIRIMPSEGIKRPKKKISVEELEDTEIHKKFLEKDELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPNNNKKQYQILTPKTESSIGKISVDPHVIKLLKNYKTDVQDTWKNELYVDNNFVFTDVNGYPLVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTMNIYAKITNSYKKDASQKFSKLMENVSKDLF
>CP030136.1|QAZ53101.1|713765_715382_+|molecular-chaperone-GroEL
MVKQLKFSEDARQAMLRGVDQLANAVKVTIGPKGRNVVLDKEFTAPLITNDGVTIAKEIELEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEGLKNVTSGANPVGLRQGIDKAVKVAVEALHENSQKVENKNEIAQVGAISAADEEIGRYISEAMEKVGNDGVITIEESNGLNTELEVVEGMQFDRGYQSPYMVTDSDKMVAELERPYILVTDKKISSFQDILPLLEQVVQSNRPILIVADEVEGDALTNIVLNRMRGTFTAVAVKAPGFGDRRKAMLEDLAILTGAQVITDDLGLDLKDASIDMLGTASKVEVTKDNTTVVDGDGDENSIDARVSQLKSQIEETESDFDREKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIEAEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEAGIVDPTKVTRSALQHAASVAAMFLTTEAVVASIPEKNNDQPNMGGMPGMM
>CP030136.1|QAZ53100.1|713405_713690_+|co-chaperone-GroES
MLKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE
>CP030136.1|QAZ53099.1|712487_713231_-|CPBP-family-intramembrane-metalloprotease
MTRLWASLLTVIIYILSQFLPLLIVKKLPFVQYSGIELTKAVIYIQLVLFLIAATTIILINLKIKNPTKLELEVKEPKKYIIPWALLGFALVMIYQMVVSIVLTQIYGGQQVSPNTEKLIIIARKIPIFIFFVSIIGPLLEEYVFRKVIFGELFNAIKGNRIVAFIIATTVSSLIFALAHNDFKFIPVYFGMGVIFSLAYVWTKRLAVPIIIHMLQNGFVVIFQLLNPEALKKATEQANFIYHIFIP
>CP030136.1|QAZ53098.1|711203_712463_+|hypothetical-protein
MSYHWFKKMLLSTSILILSSSSLGLATHTVEAKDNLNGEKPTTNLNHNITSPSVNSEMNNNETGTPHESNQTGNEGTGSNSRDANPDSNNVKPDSNNQNPSTDSKPDPNNQNPSPNPKPDPDNPKPKPDPKPDPDKPKPNPDPKPDPDNPKPNPDPKPDPDKPKPNPDPKPDPDKPKPNPNPKPDPNKPNPNPSPDPDQHGDSNHSGGSKNGGTWNPNASDGSNQGQWQPNGNQGNSQNPTGNDFVSQRFLALANGAYKYNPYILNQINKLGKDYGEVTDEDIYNIIRKQNFSGNAYLNGLQQQSNYFRFQYFNPLKSERYYRNLDEQVLALITGEIGSMPDLKKPEDKPDSKQRSFEPHEKDDFTVVKKQEDNKKSASTAYSKSWLAIVCSMMVVFSIMLFLFVKRNKKKNKNESQRR
>CP030136.1|QAZ53097.1|710380_711007_-|nitroreductase-family-protein
MGLFKKDKKAMTFDNAMEERRSIYNLKDSISISDDELESMIAHAVKHVPSSFNSQSTRIVLLLNDNNNKFWDNTKAILKEVMGENRDFEPTEQKIDNFKHSYGTILFYEDQDVVSGLQEQMPNYYDNFAIWSTQTNAMHQFAIWTALATKGIGASLQHYNPLVDEMTSNEFNIPKSWKLIAQMPFGDIREAAGEKTFNPVEDRFVIKK
>CP030136.1|QAZ53096.1|709234_710020_-|carbon-nitrogen-family-hydrolase
MKVQIYQLPIIFGDSSKNEAQITQWFEKNMNAEVDVVVLPEMWNNGYDLEHLNEKADNNLGQSFSFIKHLAEKYKVDIVAGSVSNIRNNQIFNTAFSVNKSGQLINEYDKVHLVPMLREHEFLTAGENVAEPFQLSDGTYVTQLICYDLRFPELLRYPARSGAKIAFYVAQWPMSRLQHWHSLLKARAIENNMFVIGTNSTGFDGNTEYAGHSIVINPNGDLVGELNESADILTVDLNLNEVEQQRENIPVFKSIKLDLYK
>CP030136.1|QAZ53095.1|708503_708638_+|delta-lysin-family-phenol-soluble-modulin
MSCLILRIFILIKEGVISMAQDIISTIGDLVKWIIDTVNKFTKK
>CP030136.1|QAZ53094.1|707704_708268_-|accessory-gene-regulator-AgrB
MNYFDNKIDQFATYLQKRNNLDHIQFLQVRLGMQIIVGNFFKILVTYSISIFLSVFLFTLVTHLSYMLIRYNAHGAHAKSSILCYIQSILTFVFVPYFLINIDINFTYLLALSIIGLISVVIYAPAATKKQPIPIKLVKRKKYLSIIMYLLVLILSLIIHPFYAQFMLLGILVESITLLPIFFPKED
>CP030136.1|QAZ53104.1|717483_717702_+|transcriptional-regulator
MTILANTRKFKEAMFLKGFNLSDLSRETGVGISYLSQIVNGKKIPSPKLAKKMAEVLQVEVNELFEFEVKEA
>CP030136.1|QAZ53105.1|717706_718024_+|helix-turn-helix-domain-containing-protein
MFNINIDEDEARELLEQAINARVDELAKEKYFMTYKELSNYLNLSKPTIEELLINNGMKYYMVGSTYRFKKSDVDEFMEQLTAHMNIQNNDFKQVNIKKLLEARQ
>CP030136.1|QAZ53106.1|718020_718176_+|pathogenicity-island-protein
MKMYLTYICLVSLLTILLLAISNMYVAFSVYAWLITLGCNLTGEITTCENK
>CP030136.1|QAZ53107.1|718160_718364_+|pathogenicity-island-protein
MRKQVIITKTVVGWYNIKDIQHNLMLNIPPKVFEQYFPDVSKDVQVACLEMDLSKITEIKNKKKVGS
>CP030136.1|QAZ53108.1|718365_718776_+|pathogenicity-island-protein
MEIKQKYQLSKVVQVLEKVLYGKDKDIFLSAKDRFHFITDYRYNDTAFYEHVLKLVHKELFNILAELDFENEGFSILDEVTMTLSDVMKETQHVYRYSVIDEKGEHKHTTDRKGHVIGMLEWALDYIVGNIEVEEL
>CP030136.1|QAZ53109.1|718776_719070_+|pathogenicity-island-protein
MNWEISNIMCDIEIVKEKLEDVATTHTWFVDERFRKRSLKTKEEAVNYGLAYNEHRIHNEQVTELMLTYLKELDGLMNKFHEIEKASLQADQSESNA
>CP030136.1|QAZ53110.1|719157_720027_+|mobile-element-associated-protein
MNEIELKYDTQVSVVHYESLDSRSFKSFSKPKWSKLVNKMSVPIEANYKYARGVAVYGDIKDGANDHGEIIKKHRNDKNVIYRNVIVLDYDEINDLKQLHEAISSVLSSVAWFWHTSFSHTTEQARIRLYIPLNERISADDYRNYTKVLANKIGHKVDEGSYQPSRCFALPVIQKGHIFIKRVNDCPIIDVDMLEQWSKEFEQSNGSPNIKGYTRRDSAYWRDIAFGVSEGERNSTLASITGYLLRRYVDPNLVYGLVSAWASVCKPPINQSEVNNTFKSILKKDSKSS
>CP030136.1|QAZ53111.1|720043_721513_+|virulence-associated-protein-E
MENVTNDEVFEMIDSRTGVLNANDWKSQLRRSATTQALKKTTTNAEIILCNDESLKGLVQYDAFEKVTKLKRLPYWRSKGDANYYWADIDTTHVISHIDRLYNVQFSRDLIDTVIEKEAYQNRFHPIKSMIESKSWDGIKRIETLFIDYLGAEDNHYNREVTKKWMMGAVARIYQPGIKYDSMIILYGGQGVGKSTAVSKLGGHWYNQSIKTFKGDEVYKKLQGSWICEIEELSAFQKSTIEDIKGFISAIVDIYRASYGKRTERHPRQCVFVGTTNNYEFLKDQTGNRRFFPITTDKNKATKSPFDDLTPDVVQQMFAEAKVYFDEDPTDKALLLDKEASEMALKVQEAHSEKDALVGEIEEFLERPIPSDYWYRTLEEKRVSAHDVIDQDYIKLYGDGKLIELPNAKPGAYVWRDKVCSMEIWKVMMKRDDQPQQHHLRKIDKALRNTSYCGQSKSRHRFGEGIGRQYGFGINLISYYQGLKSKEQK
>CP030136.1|QAZ53112.1|721798_722143_+|pathogenicity-island-protein
MNKNQLKSEILEYIKAHAGTSFVEIERVFEENNFDYKGDGAYTSGQHPNVVFWIGWNQEAFDVIAELKKDRRIEMDICEPIVYMVDGKGLDLPIVRSKNIKTDHWLPVTFSLVN
>CP030136.1|QAZ53113.1|722367_722574_+|hypothetical-protein
MLDHTNESVKRVFKYRDKQELLNKYHELLDKYFLHNISFYEEDKNNERIYGLVVHTKNKLGDEDYERV

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Crispr_ID: CP030136_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP030136_6

1176967-1177054

Orphan

Consensus_repeat	Method
TGGGGCCCCAACACAGAAGCTGACGAAAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP030136_6

>merge|CP030136|6|1176967-1177054|CRISPRCasFinder
TGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACTATAATGTGCAAGTTGGGGTGGGGCCCCAACATAGAAGCTGACGAAAAG

>CP030136|6|5|1176967-1177054|CRISPRCasFinder
TGGGGCCCCAACACAGAAGCTGACGAAAAG	TCAGCTTACTATAATGTGCAAGTTGGGG
TGGGGCCCCAACATAGAAGCTGACGAAAAG

Protein	Signature genes	Signature genes Name	Protein_function
CP030136.1\|QAZ53553.1\|1177391_1178516_+\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
CP030136.1\|QAZ53549.1\|1171185_1173333_+\|DNA-internalization-related-competence-protein-ComEC/Rec2	unknown	unknown	gnl\|CDD\|225212
CP030136.1\|QAZ53559.1\|1184371_1185124_+\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	unknown	unknown	gnl\|CDD\|224303
CP030136.1\|QAZ55143.1\|1187189_1187873_+\|serine-protease	unknown	unknown	gnl\|CDD\|223961
CP030136.1\|QAZ53552.1\|1175005_1176829_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
CP030136.1\|QAZ53561.1\|1186769_1186946_+\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
CP030136.1\|QAZ53555.1\|1179625_1180252_+\|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl\|CDD\|237622
CP030136.1\|QAZ53560.1\|1185130_1186477_+\|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB	unknown	unknown	gnl\|CDD\|223694
CP030136.1\|QAZ53550.1\|1173389_1174364_+\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|235511
CP030136.1\|QAZ53548.1\|1170665_1171127_+\|ComE-operon-protein-2	unknown	unknown	gnl\|CDD\|131622
CP030136.1\|QAZ53551.1\|1174408_1174660_-\|30S-ribosomal-protein-S20	unknown	unknown	gnl\|CDD\|178943
CP030136.1\|QAZ53545.1\|1168775_1169129_+\|ribosome-silencing-factor	unknown	unknown	gnl\|CDD\|223870
CP030136.1\|QAZ53544.1\|1168190_1168775_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224627
CP030136.1\|QAZ53556.1\|1180320_1182153_+\|molecular-chaperone-DnaK	unknown	unknown	gnl\|CDD\|234715
CP030136.1\|QAZ53546.1\|1169131_1169848_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
CP030136.1\|QAZ53543.1\|1167631_1168201_+\|nicotinate-nicotinamide-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|273101
CP030136.1\|QAZ53547.1\|1169887_1170574_+\|ComEA-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|224472
CP030136.1\|QAZ53558.1\|1183431_1184370_+\|50S-ribosomal-protein-L11-methyltransferase	unknown	unknown	gnl\|CDD\|283886
CP030136.1\|QAZ53554.1\|1178616_1179594_+\|HrcA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|273017
CP030136.1\|QAZ53557.1\|1182288_1183428_+\|molecular-chaperone-DnaJ	unknown	unknown	gnl\|CDD\|237656

Protein	Function_ID	Function_description	E-value
CP030136.1\|QAZ53553.1\|1177391_1178516_+\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
CP030136.1\|QAZ53549.1\|1171185_1173333_+\|DNA-internalization-related-competence-protein-ComEC/Rec2	gnl\|CDD\|225212	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only].	1.36441e-90
CP030136.1\|QAZ53559.1\|1184371_1185124_+\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	gnl\|CDD\|224303	COG1385, COG1385, Uncharacterized protein conserved in bacteria [Function unknown].	1.46402e-91
CP030136.1\|QAZ55143.1\|1187189_1187873_+\|serine-protease	gnl\|CDD\|223961	COG1030, NfeD, Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones].	8.78003e-63
CP030136.1\|QAZ53552.1\|1175005_1176829_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
CP030136.1\|QAZ53561.1\|1186769_1186946_+\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	1.15423e-10
CP030136.1\|QAZ53555.1\|1179625_1180252_+\|nucleotide-exchange-factor-GrpE	gnl\|CDD\|237622	PRK14140, PRK14140, heat shock protein GrpE; Provisional.	3.74407e-81
CP030136.1\|QAZ53560.1\|1185130_1186477_+\|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB	gnl\|CDD\|223694	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis].	0
CP030136.1\|QAZ53550.1\|1173389_1174364_+\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|235511	PRK05574, holA, DNA polymerase III subunit delta; Reviewed.	3.41932e-104
CP030136.1\|QAZ53548.1\|1170665_1171127_+\|ComE-operon-protein-2	gnl\|CDD\|131622	TIGR02571, putative_dCMP_deaminase, ComE operon protein 2. This protein is found in the ComE operon for "late competence" as characterized in B. subtilis. Proteins in this family contain homology to a cytidine/deoxycytidine deaminase domain family (pfam00383), and may carry out this activity.	4.81051e-102
CP030136.1\|QAZ53551.1\|1174408_1174660_-\|30S-ribosomal-protein-S20	gnl\|CDD\|178943	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed.	1.42889e-17
CP030136.1\|QAZ53545.1\|1168775_1169129_+\|ribosome-silencing-factor	gnl\|CDD\|223870	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown].	5.95861e-47
CP030136.1\|QAZ53544.1\|1168190_1168775_+\|HD-domain-containing-protein	gnl\|CDD\|224627	COG1713, COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism [Coenzyme metabolism].	8.54529e-80
CP030136.1\|QAZ53556.1\|1180320_1182153_+\|molecular-chaperone-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
CP030136.1\|QAZ53546.1\|1169131_1169848_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.00559e-15
CP030136.1\|QAZ53543.1\|1167631_1168201_+\|nicotinate-nicotinamide-nucleotide-adenylyltransferase	gnl\|CDD\|273101	TIGR00482, Probable_nicotinate-nucleotide_adenylyltransferase, nicotinate (nicotinamide) nucleotide adenylyltransferase. This model represents the predominant bacterial/eukaryotic adenylyltransferase for nicotinamide-nucleotide, its deamido form nicotinate nucleotide, or both. The first activity, nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1), synthesizes NAD by the salvage pathway, while the second, nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) synthesizes the immediate precursor of NAD by the de novo pathway. In E. coli, NadD activity is biased toward the de novo pathway while salvage activity is channeled through the multifunctional NadR protein, but this division of labor may be exceptional. The given name of this model, nicotinate (nicotinamide) nucleotide adenylyltransferase, reflects the lack of absolute specificity with respect to substrate amidation state in most species. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides].	1.98239e-76
CP030136.1\|QAZ53547.1\|1169887_1170574_+\|ComEA-family-DNA-binding-protein	gnl\|CDD\|224472	COG1555, ComEA, DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair].	2.53337e-32
CP030136.1\|QAZ53558.1\|1183431_1184370_+\|50S-ribosomal-protein-L11-methyltransferase	gnl\|CDD\|283886	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA). This family consists of several Ribosomal protein L11 methyltransferase (EC:2.1.1.-) sequences.	9.7051e-134
CP030136.1\|QAZ53554.1\|1178616_1179594_+\|HrcA-family-transcriptional-regulator	gnl\|CDD\|273017	TIGR00331, Heat-inducible_transcription_repressor_HrcA, heat shock gene repressor HrcA. HrcA represses the class I heat shock operons groE and dnaK; overproduction prevents induction of these operons by heat shock while deletion allows constitutive expression even at low temperatures. In Bacillus subtilis, hrcA is the first gene of the dnaK operon and so is itself a heat shock gene. [Regulatory functions, DNA interactions].	2.05887e-119
CP030136.1\|QAZ53557.1\|1182288_1183428_+\|molecular-chaperone-DnaJ	gnl\|CDD\|237656	PRK14280, PRK14280, molecular chaperone DnaJ.	0

>CP030136.1|QAZ53552.1|1175005_1176829_+|elongation-factor-4
MDNEQRLKRRENIRNFSIIAHIDHGKSTLADRILENTKSVETRDMQDQLLDSMDLERERGITIKLNAVRLKYEAKDGNTYTFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNELELMPVINKIDLPAAEPERVKQEIEDMIGLDQDDVVLASAKSNIGIEEILEKIVEVVPAPDGDPEAPLKALIFDSEYDPYRGVISSIRIVDGVVKAGDKIRMMATGKEFEVTEVGINTPKQLPVDELTVGDVGYIIASIKNVDDSRVGDTITLASRPASEPLQGYKKMNPMVYCGLFPIDNKNYNDLREALEKLQLNDASLEFEPESSQALGFGYRTGFLGMLHMEIIQERIEREFGIELIATAPSVIYQCILRDGSEVTVDNPAQMPDRDKIDKIFEPYVRATMMVPNDYVGAVMELCQRKRGQFINMDYLDDIRVNIVYELPLAEVVFDFFDQLKSNTKGYASFDYEFIENKESNLVKMDILLNGDKVDALSFIVHRDFAYERGKALVEKLKTLIPRQQFEVPVQAAIGQKIVARTNIKSMGKNVLAKCYGGDISRKRKLLEKQKAGKAKMKAVGNVEIPQDAFLAVLKMDDE
>CP030136.1|QAZ53551.1|1174408_1174660_-|30S-ribosomal-protein-S20
MANIKSAIKRVKTTEKAEARNISQKSAMRTAVKNAKTAVSNNADNKNELVSLAVKLVDKAAQSNLIHSNKADRIKSQLMTANK
>CP030136.1|QAZ53550.1|1173389_1174364_+|DNA-polymerase-III-subunit-delta
MGDNIVAIYGDVPELVEKQSAEIISQFLKSDRDDFNFVKYNLYETEIAPIVEETLTLPFFSDKKAILVKNAYIFTGEKAPKDMAHNVDQLIEFIEKYDGENLIVFEIYQNKLDERKKLTKTLKKHARLKKIEQMSEEEIKKWIQSKLNENFKDIKRDALDLFIELTGINFNIVSQEIEKLILFLGDRPTINKQDVNQIINRSLEQNVFLLTEYIQKRKKEQAIHLVKDLITMKEEPIKLLALITSNYRLFYQCKILSQKGYSGQQIAKTIGVHPYRVKLALGQVRHYQLDELLNIVDACAETDYKLKSSYMDKQLILELFILSL
>CP030136.1|QAZ53549.1|1171185_1173333_+|DNA-internalization-related-competence-protein-ComEC/Rec2
MLSTFLFILLLYIAYRKNKIVYAPTSLFLIIFSSWYLHYSQQAIFNYINYIERTSQFNERAQVIQIQRQDSDTYKGRLSLKNEIYPFFLTDKKNFDLKKIESRNCIVKGQFKVNENKFVTLKLQSIVVQSCLESNRSNLIEKHKQFIMNRIYDSGIKFPDRIMALITGDVKEINEQFKERVKEIGIYHLLAVSGSHIAAIVFLIYQPLKRLNLPLFVIKGITIIVLTLFAQYTNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISFFIMLLFPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSIILFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSHFSVPKFNDWIFIIFIISVYYIFWLLAKRKYILVTFWTIIILTLLITFPTNSHHKITMLNVGQGDSILYEGGKNQNVLIDTGGKVIDDTKQPSYSISKYHILPTLNERGINELEYLILTHPHNDHIGEVEYIISHIKIKHIVIYNKGYSSNTLMLLSKLSHKYNIKLMDVRQVSSFKLGDSSFLFFDSFIPNSRDKNEYSIITMITYQNKKVLLMGDASKNNESLLLKKYNLPEIDILKVGHHGSKTSSSKEFIEMIKPKISLISSGKNNMYHLPNIEVVKRLQRIRSRIYNSQQNGQVTIDLDDNLKVDSNSYGNASGL
>CP030136.1|QAZ53548.1|1170665_1171127_+|ComE-operon-protein-2
MERIKWEEYFMAQSHLLALRSTCQRLSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIEDGHCIRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKRIYYAEDYHNHEYATKLLKQSGIEFKKIPFSPEYVAKYLTKG
>CP030136.1|QAZ53547.1|1169887_1170574_+|ComEA-family-DNA-binding-protein
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKVEDVQVKDGDNSKNKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHEKNGNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT
>CP030136.1|QAZ53546.1|1169131_1169848_+|class-I-SAM-dependent-methyltransferase
MSQYAEMSLVYDQLTQDQPYEKWFEIVKNHCKDESKILDIGCGTGSLTVQLEALGNVTGMDLSVDMLTVAAQKSANVNWLEGDMTSFDLQQQFDIITIFCDSLNYLQDETAVIETFINVYHHLTDSGVFIFDVHTVYKMMTLFNNQSYIDDKGDIFLAWDAVQGDLPLSVYHDMTFFIRHEDETYSRFDESHFQRTFDEKTYLSWLAQVGFKHVETFTDFNIDEHNEDAERLFFIAKK
>CP030136.1|QAZ53545.1|1168775_1169129_+|ribosome-silencing-factor
MNSQELLAIAVDAIDNKKGEDTISLEMKGISDMTDYFVVTHGNNERQVQAIARAVKEVANEQNIEVKRMEGYNEARWILIDLADVVVHVFHKDERNYYNIEKLYQDAPLESYGQVAY
>CP030136.1|QAZ53544.1|1168190_1168775_+|HD-domain-containing-protein
MNIEKAKRLAKEKLPEKRYNHSLRVSETAIKLAEIYDGDTSKVELAGVLHDFCKYDDLGKMYQIVRQYELGNDLLSYGSEILHGPVCAAIMEHEYGINDEEVLMAIKYHTTGRQQMTKTEKLIFIADYIEPGRTIPGVDDIRDMAYNQGSLDKTIYEISKRTVLFLIQKDITVYNKTIDCLNYYNYSDERIKDD
>CP030136.1|QAZ53543.1|1167631_1168201_+|nicotinate-nicotinamide-nucleotide-adenylyltransferase
MKKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPLKKHHDFIDVQHRLTMIQMIIDELGFGDICDDEIKRGGQSYTYDTIKAFKEQHKDSELYFVIGTDQYNQLEKWYQIEYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISSTMIRQRVSEGKSIQVLVPKSVENYIKGEGLYEH
>CP030136.1|QAZ53553.1|1177391_1178516_+|oxygen-independent-coproporphyrinogen-III-oxidase
MTVQSAYIHIPFCVRICTYCDFNKYFIQNQPVDEYLDALITEMSTAKYRNLKTMYVGGGTPTALSINQLERLLKAIRDTFTITGEYTFEANPDELTKEKVQLLEKYGVNRISMGVQTFKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMDIQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFALDGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVNHYIKAINKESKAILVSNKPSLTERMEEEMFLGLRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIVEKNDAIALTKRGKVIGNEVFEAFLIND
>CP030136.1|QAZ53554.1|1178616_1179594_+|HrcA-family-transcriptional-regulator
MITDRQLSILNAIVEDYVDFGQPVGSKTLIERHNLNVSPATIRNEMKQLEDLNYIEKTHSSSGRSPSQLGFRYYVNRLLEQTSHQKTNKLRRLNQLLVENQYDVSSALTYFADELSNISQYTTLVVHPNHKQDIINNVHLIRANPNLVIMVIVFSSGHVEHVHLASDIPFSNDKLNTISNFVTNKLTEFNQNLQDDIVSFVQSEQEEIFINKLINTMNNHISNQSNSIYMGGKVKLIDALNESNVSSIQPILQYIESNRIAELLQDISSPNINVKIGNEIDDSLSDISIVTSQYHFDETLKGQIAVIGPTAMHYQNVIQLLNRIW
>CP030136.1|QAZ53555.1|1179625_1180252_+|nucleotide-exchange-factor-GrpE
MTNKDESVEKNTESTVEETNIKQNIDDSVEQAEESKGHLQDEAIEETSDENVIEEIDPKDQKINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERALQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEITQELQKGYKLKDRVLRPSMVKVNQ
>CP030136.1|QAZ53556.1|1180320_1182153_+|molecular-chaperone-DnaK
MSKIIGIDLGTTNSCVTVLEGDEPKVIQNPEGSRTTPSVVAFKNGETQVGEVAKRQAITNPNTVQSIKRHMGTDYKVDIEGKSYTPQEISAMILQNLKNTAESYLGEKVDKAVITVPAYFNDAERQATKDAGKIAGLEVERIINEPTAAALAYGLDKTDKDEKVLVFDLGGGTFDVSILELGDGVFEVLSTAGDNKLGGDDFDQVIIDYLVAEFKKENGVDLSQDKMALQRLKDAAEKAKKDLSGVSQTQISLPFISAGENGPLHLEVNLTRSKFEELSDSLIRRTMEPTRQAMKDAGLTNSDIDEVILVGGSTRIPAVQEAVKKEIGKEPNKGVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIEILGGRMNTLIERNTTIPTSKSQIYSTAVDNQPSVDVHVLQGERPMAADNKTLGRFQLTDIPPAERGKPQIEVTFDIDKNGIVNVTAKDLGTNKEQRITIQSSSSLSDEEIDRMVKDAEVNAEADKKRREEVDLRNEADSLVFQVEKTLTDLGENIGEEDKKSAEEKKDALKTALEGQDIEDIKSKKEELEKVIQELSAKVYEQAAQQQQQAQGANAGQNNDSTVEDAEFKEVKDDDKK
>CP030136.1|QAZ53557.1|1182288_1183428_+|molecular-chaperone-DnaJ
MAKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENKTVKLEVKVPEGVDNEQQIRLAGEGSPGVNGGPAGDLYVVFRVKPSETFKRDGDDIYYKLNVSFPQAALGDEIKIPTLNNEVMLTIPAGTQTGKQFRLKEKGIKNVHGYGYGDLYVDIKVVTPTKLTDRQKELMKEFAQLNGEEINEQPSNFKDRAKRFFKGE
>CP030136.1|QAZ53558.1|1183431_1184370_+|50S-ribosomal-protein-L11-methyltransferase
MNWTELSIIINHEAVELATNILENHGSNGVVIEDSDDLINQPEDKYGEIYALKKEDYPDKGVRLKAYFNEMTYDDKLRQQIKDELLNLDELDQHNIQFSEQIIAETDWENEWKNYFHPFRASKKFTIVPSWETYAKEADEELCIELDPGMAFGTGDHPTTSMCLKAIETYVLPQHSVIDVGTGSGILSIASHLIGVKRIKALDIDEMAVSVAKENFRRNHCETLIEAVPGNLLKDETEKFDIVIANILAHIIDEMIEDAYNTLNEGGYFITSGIIKEKYEGIQSHMERVGFKIISEQHDNGWVCLVGQKVSE
>CP030136.1|QAZ53559.1|1184371_1185124_+|16S-rRNA-(uracil(1498)-N(3))-methyltransferase
MQRYFIDQNADVSQRFFITKKEDIHHITNVMRYDVGSKIILTFNDQTVYLCEIADITSDKIEVDLKEKQNINTELPVDVTICSGLIKADKYEWLLQKATELGASSFIAVSMERSIVKLNEAKVAKKIERWQKIIKEAAEQSYRLVIPSIQFESNLKLICDTIDNYDYILIAYEEEAKDGELSNFKQTLQQFKAQDKVLMIFGPEGGLSENEISLFSNTSTVVGLGPRILRAETAPLYALSAISYEKELMG
>CP030136.1|QAZ53560.1|1185130_1186477_+|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB
MSTVAFHTLGCKVNHYETEAIWQLFKEANYERVDFEANADVFVINTCTVTNTGDKKSRQIIRRAIRQNPDAVICVTGCYAQTSSAEIMEIPGVDVVVGTQDRHKLLGYIDEFRKERQPINGVGNIMKNRKYEELDVPYFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPEKVVEQATQLVNSGYKEIVLTGIHTGGYGQDLKDYNLAQLLRDLETINGLERIRISSIEASQLTDEVIDVLERSTKVVRHLHIPLQSGSDTVLKRMRRKYTMDRFSERLTKLHKALPDLAVTSDVIVGFPGETEAEFQETYDFIVKHKFSELHVFPYSPRIGTPAARMDDQIDEEIKNERVHKLITLSNQLGKLYASKFDQDVLEVIPEEQGDTEGTLVGYADNYMKVQFEGDESLIGQIVKVKITQANYPLNEGQAIKVVDFATNKSDREVLV
>CP030136.1|QAZ53561.1|1186769_1186946_+|30S-ribosomal-protein-S21
MSKTVVRKNESLEDALRRFKRSVSKSGTIQEVRKREFYEKPSVKRKKKSEAARKRKFK
>CP030136.1|QAZ55143.1|1187189_1187873_+|serine-protease
MTTILESTAGDTWVEQVSNIIVQPIFTLILTCLTFLGFVYQLYSKKINAAGIIATLSLLILFLGFLIQGNVNMHSILIFSIGVILVVIELFVVGAVIGIIGMILITISITTLGDNLLFMLANVIVALILTIVEWVILVKIFNRKIPFLDKVILKDSTNSESGYNSHDNRSHLVGKTAQTVTDLRPAGIIFCENERIDAVSDGNFILRNKTVKILEVEGTRVVVREVD

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Crispr_ID: CP030136_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP030136_7

2133298-2133391

Orphan

Consensus_repeat	Method
GGCTTTTATGCAGTTGCTGCACAAACAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP030136_7

>merge|CP030136|7|2133298-2133391|CRISPRCasFinder
GGCTTTTATGCAGTTGCTGCACAAACAACTGTATTCCTTTACTCCCCTTGAGCTTTAGCGATTAGGGGCTCTTATGCAGTTGCTGCACAAACAA

>CP030136|7|6|2133298-2133391|CRISPRCasFinder
GGCTTTTATGCAGTTGCTGCACAAACAA	CTGTATTCCTTTACTCCCCTTGAGCTTTAGCGATTAGG
GGCTCTTATGCAGTTGCTGCACAAACAA

Protein	Signature genes	Signature genes Name	Protein_function
CP030136.1\|QAZ54465.1\|2140799_2141336_-\|flavodoxin-family-protein	unknown	unknown	gnl\|CDD\|223728
CP030136.1\|QAZ55169.1\|2136069_2136453_-\|DUF1934-family-protein	unknown	unknown	gnl\|CDD\|226896
CP030136.1\|QAZ54464.1\|2140154_2140631_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP030136.1\|QAZ54463.1\|2138819_2140115_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224004
CP030136.1\|QAZ54466.1\|2141546_2142485_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381309
CP030136.1\|QAZ54459.1\|2130430_2131150_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223943
CP030136.1\|QAZ55170.1\|2138270_2138792_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378039
CP030136.1\|QAZ55168.1\|2132302_2133130_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238563
CP030136.1\|QAZ54452.1\|2124249_2124474_+\|DUF2922-domain-containing-protein	unknown	unknown	gnl\|CDD\|378571
CP030136.1\|QAZ55167.1\|2131204_2132155_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
CP030136.1\|QAZ54458.1\|2129646_2130447_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
CP030136.1\|QAZ54457.1\|2129004_2129511_-\|hypothetical-protein	unknown	unknown	unknown
CP030136.1\|QAZ54461.1\|2134411_2136073_-\|arginine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234964
CP030136.1\|QAZ54455.1\|2127169_2127958_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
CP030136.1\|QAZ54460.1\|2133506_2134142_-\|endonuclease-III-domain-containing-protein	unknown	unknown	gnl\|CDD\|225140
CP030136.1\|QAZ54453.1\|2124667_2125597_+\|EamA-like-transporter-family-protein	unknown	unknown	gnl\|CDD\|225778
CP030136.1\|QAZ54467.1\|2142754_2143381_-\|DUF443-domain-containing-protein	unknown	unknown	gnl\|CDD\|335700
CP030136.1\|QAZ54454.1\|2126544_2126919_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|130944
CP030136.1\|QAZ54462.1\|2136761_2137772_-\|zinc-dependent-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|181842
CP030136.1\|QAZ54456.1\|2128126_2128843_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP030136.1\|QAZ54465.1\|2140799_2141336_-\|flavodoxin-family-protein	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	3.16348e-26
CP030136.1\|QAZ55169.1\|2136069_2136453_-\|DUF1934-family-protein	gnl\|CDD\|226896	COG4506, COG4506, Uncharacterized protein conserved in bacteria [Function unknown].	9.50091e-54
CP030136.1\|QAZ54463.1\|2138819_2140115_-\|HD-domain-containing-protein	gnl\|CDD\|224004	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only].	3.86139e-150
CP030136.1\|QAZ54466.1\|2141546_2142485_-\|aldo/keto-reductase	gnl\|CDD\|381309	cd19083, AKR_AKR11A1_11D1, AKR11A and AKR11D families of aldo-keto reductase (AKR). Bacillus subtilis aldo-keto reductase IolS, also called vegetative protein 147 (VEG147), is a founding member of aldo-keto reductase family 11 member A1 (AKR11A1). It is able to reduce the standard aldo-keto reductase (AKR) substrates DL-glyceraldehyde, D-erythrose, and methylglyoxal in the presence of NADPH, albeit with poor efficiency in vitro. Bacillus aryabhattai aldo keto reductase is a founding member of aldo-keto reductase family 11 member D1 (AKR11D1).	1.82718e-167
CP030136.1\|QAZ54459.1\|2130430_2131150_-\|HAD-family-hydrolase	gnl\|CDD\|223943	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only].	3.6864e-38
CP030136.1\|QAZ55170.1\|2138270_2138792_-\|hypothetical-protein	gnl\|CDD\|378039	pfam08741, YwhD, YwhD family. This family of proteins are currently uncharacterized. They are around 170 amino acids in length.	8.7406e-98
CP030136.1\|QAZ55168.1\|2132302_2133130_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238563	cd01143, YvrC, Periplasmic binding protein YvrC. These proteins are predicted to function as initial receptors in ABC transport of metal ions in eubacteria and archaea. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.	1.43637e-72
CP030136.1\|QAZ54452.1\|2124249_2124474_+\|DUF2922-domain-containing-protein	gnl\|CDD\|378571	pfam11148, DUF2922, Protein of unknown function (DUF2922). This bacterial family of proteins has no known function.	5.21775e-14
CP030136.1\|QAZ55167.1\|2131204_2132155_-\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	4.26015e-48
CP030136.1\|QAZ54458.1\|2129646_2130447_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	7.17592e-26
CP030136.1\|QAZ54455.1\|2127169_2127958_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.55978e-34
CP030136.1\|QAZ54461.1\|2134411_2136073_-\|arginine--tRNA-ligase	gnl\|CDD\|234964	PRK01611, argS, arginyl-tRNA synthetase; Reviewed.	0
CP030136.1\|QAZ54464.1\|2140154_2140631_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.13315e-11
CP030136.1\|QAZ54460.1\|2133506_2134142_-\|endonuclease-III-domain-containing-protein	gnl\|CDD\|225140	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair].	9.55275e-93
CP030136.1\|QAZ54453.1\|2124667_2125597_+\|EamA-like-transporter-family-protein	gnl\|CDD\|225778	COG3238, COG3238, Uncharacterized protein conserved in bacteria [Function unknown].	4.98621e-36
CP030136.1\|QAZ54467.1\|2142754_2143381_-\|DUF443-domain-containing-protein	gnl\|CDD\|335700	pfam04276, DUF443, Protein of unknown function (DUF443). Family of uncharacterized proteins.	4.44435e-60
CP030136.1\|QAZ54454.1\|2126544_2126919_+\|transcriptional-regulator	gnl\|CDD\|130944	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family. This model represents a family of transcriptional regulatory proteins in Staphylococcus aureus and Staphylococcus epidermidis. Some members contain two tandem copies of this region. This family is related to the MarR transcriptional regulator family described by pfam01047. [Regulatory functions, DNA interactions].	1.77309e-26
CP030136.1\|QAZ54462.1\|2136761_2137772_-\|zinc-dependent-alcohol-dehydrogenase	gnl\|CDD\|181842	PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional.	0

>CP030136.1|QAZ55168.1|2132302_2133130_-|ABC-transporter-substrate-binding-protein
MKDNDKQGSNDNGSSKSPYHRIVSLMPSNTEILYELGLGKYIVGVSTVDDYPKDVKKGKKQFDALNLNKEELLKAKPDLILAHESQKATANKVLSSLEKQGIKVVYVKDAQSIDETYNTFKQIGKLTHHDKQAEQLVEETKDNIDKVIDSIPAHHKKSKVFIEVSSKPEIYTAGKHTFFNDMLEKLEAQNVYSDINGWNPVTKESIIKKNPDILISTEAKTRSDYMDIIKKRGAFNKINAVKNTRIEVVNGDEVSRPGPRIDEGLKELRDAIYRK
>CP030136.1|QAZ55167.1|2131204_2132155_-|iron-ABC-transporter-permease
MTFNKVLLSWIVILIITTSIYLFWQLGDINDVFNQSILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFGSGLALFLGLTTLWIPVFSITFSLITLITVLVITSVLSQGYPVRILILSGLMIGALFNSLLYFLILLKPRKLNTIANYLFGGFGDAEYSNVSIIAIIFIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIGFIGMVIPQLIRKWQWKQSLGRQLALNIVTGGQIMVMADFIGSHILSPVQIPASIIIALIGIPVLFYMLISQSKRLH
>CP030136.1|QAZ54459.1|2130430_2131150_-|HAD-family-hydrolase
MDLNQIKAVVFDLEGTLLDRVKSREKFIEEQYERFHDYLIHVQLADFKKAFIELDDDEDNDKPDLYKEIIKRFHVDRLTWKDLFNDFEMHFYRYVFPYYDTLYTLEKLSQKGFQIGVIANGKSKIKQFRLHSLGLMHVINYLSTSETVGFRKPHPKIFEDMIDQLGVLPEQIMYVGDDALNDVAPARAMGMVSVWYKQEDAEIEPLEEEVDFTITTVEELLTILPIKNDNKGENYGSIY
>CP030136.1|QAZ54458.1|2129646_2130447_-|alpha/beta-hydrolase
MDLFTRKDGTSIHYSTLGEGYPIVLIHTVLDNYSVFNKLAAELAKSFQVVLIDLRGHGYSDKPRHIEIKDFSDDIVELLKYLYIEEVAFVCHEMGGIIGADISVRYPEFTSSLTLVNPTSIEGELPEERLFRKYAHIIRNWDPEKQDKFLNKRKYYRPRKMNRFLKHVVDTNEISTKEEIQAVKEVFKNADISQTYRNVVVPTKIIAGEFGERTTRLEAKEVADLIQNADFEVYQESSAFPFVEEQERFVEDTAAFINKHHDEKHV
>CP030136.1|QAZ54457.1|2129004_2129511_-|hypothetical-protein
MKKLLTASIIACSVVMGVGLVNTSAEAASGNSIDTVKQLIKGDQSLENVKIGESIKDVLTKYKNPMYSYNEDGTEHYYEFHTKKGMLLVTTDGKKNNGKVTHISMMYNDANGPTYQAVKNYVGKAVTHTEYSKVAGNFGYIEKGKTTYQFASAPKDKNIKLYRIDLEK
>CP030136.1|QAZ54456.1|2128126_2128843_-|hypothetical-protein
MRINDKILLENIEDYFNHKGLSPHLIDDIKEKVITDIKNSEKKDQDYIEYKRKSPAQIILMIQRNLFALQMNPVIFFIINFILISYLYDKQYVQFQAITGMSLFYCLVIFPMTIVVYLRVSQKNYLRSNKIEMIMGTIIAIISLLLIILQAFNITWGVIPITNFGHQFFFFIGIILVIAGIFYKRLEFSGIGLLFCQKTVDAMIHNPQSAQIFSLIIWILLVVLVIYFTIRLSSRTRL
>CP030136.1|QAZ54455.1|2127169_2127958_-|alpha/beta-hydrolase
MNKVTINPQIQLTYQIEGKGDPIILLHGLDGNLAGFEDLQHQLASSYKVLTYDLRGHGKSSKSESYDLNDHVEDLKILMEKLNIHEAHILGHDLGGVVAKLFTDKYAYRVKSLTTIASKKDDLIHSFTQLLIQYQDDIAGFNKSEAYILLFSKLFRNQEKTMKWYQKQRIYSIKSEDDSAVAIRSLILHKDEPMYLKKRTCVPTLLINGEHDPLIKDKNHFKLEAHFLNVTKKIFEHSGHAPHIEEPEAFMNYYLKFLKSVS
>CP030136.1|QAZ54454.1|2126544_2126919_+|transcriptional-regulator
MAITKINDCFELLSMVTYADKLKSLIKKEFSISFEEFAVLTYISENKEKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQRKKIESLLSRVNKRITEANNEIEL
>CP030136.1|QAZ54453.1|2124667_2125597_+|EamA-like-transporter-family-protein
MLLFYIIGVLVGMLIPIQTSVNSRLSLYTKSPFYTSFISFSVGTICLIILNIIINPKVFTIHFYNNQSFNYTWVVGGLLGVSFLTGNLLLLPKLGATLTVIATVAGQIIMGVIIDTLGLFGATIHDFNLIKAIGVLLLIIGIVIMNQFNKNNLLLTDQKYLLFWLLLGYIFGFFPPIQTTINSALASHTHSPAFASLVSFTIGSIALLILTAIFNRSLKLKTSHLKFGKLKPIYFTGGILGMAFVTANIILMPHMGAALTTLIGMFGQILMGILIDHFGLFGSPKIAMTSRKTIGLLCILTGIILLRLF
>CP030136.1|QAZ54452.1|2124249_2124474_+|DUF2922-domain-containing-protein
MTKTLELSFKSSLDKPVKLQLPQLNNVVTEQVVRDSMNALVDLNIIKSNSGTITKVHSAQIIDKTTTVLFEDKK
>CP030136.1|QAZ54460.1|2133506_2134142_-|endonuclease-III-domain-containing-protein
MLGTDELYKLLYRHMGPQNWWPADNDIELMLGAILVQNTRWRNAEIALNQIKEHTHFNPNHILELPIETLQSLIHSSGFYKSKSLTIKTLLTWLARHHFNYQEINERYKGGLRKELLSLKGIGSETADVLLVYIFGRIEFIPDSYTRKIYDKLGYENTKNYDQLKKVVTLPNHFTNQDANEFHALLDVFGKHYFRDKDIKNYDFLEPYFKK
>CP030136.1|QAZ54461.1|2134411_2136073_-|arginine--tRNA-ligase
MNIIDQVKQTLVEEIAASINKAGLADEIPDIKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKHPEIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLYEKGEILEVLAKMKELGYTYEADGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAANDFTTITNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFHKFYNAEKVLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM
>CP030136.1|QAZ55169.1|2136069_2136453_-|DUF1934-family-protein
MLKQHNEKEKFEFTTEGTWQQRQSNFIRYVEQIEDATVNVTIKVDDDSVKLIRKGDINMNLHFVEGQTTTTFYDISAGRIPLEVKTLRILHFVSGDGGKLKIHYELYQDNEKMGSYQYEINYKEIGE
>CP030136.1|QAZ54462.1|2136761_2137772_-|zinc-dependent-alcohol-dehydrogenase
MRAAVVTKDHKVSIEDKKLRALKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKDVDPVAEVMKLTDNKGLDATVVTSVAKTPFNQAVDVVKAGARVVAVGLPVDKMNLDIPRLVLDGIEVVGSLVGTRQDLREAFEFAAENKVTPKVQLRKLEEINDIFEEMENGTITGRMVIKF
>CP030136.1|QAZ55170.1|2138270_2138792_-|hypothetical-protein
MEVISLSEKKGFNFNIIKNDPLDGHKGTNIGSISLDNIAPVFIDVANKEAFIDIGGMHARAKVEKGVKWITDKAAVEGDEAKEYWLCWVTTERNEQGPYYAGLTACYLLVNKAIRRGYKSMPEHVNMMDKSMKHHIIIDQIGDENKAILKDFLMNHDEGMWKHSSDALHQAFN
>CP030136.1|QAZ54463.1|2138819_2140115_-|HD-domain-containing-protein
MTNAFVDLKLVEEKVFKDPIHRYIHVEDQLIWDLIKTKEFQRLRRIRQLGTLYLSFHTAEHSRFGHSLGVYEIVRRLIDESFIGHDAWDNKDRPLALCAALLHDLGHGPFSHSFEKIFNTDHEAYTQAIITGDTEVNAVLRKVAPEFPREVAEVINKTHHNKLVISMISSQIDADRMDYLQRDAYFTGVSYGAFDMERILRLMRPSKDEVLIKESGMHAVENFIMSRYQMYWQIYFHPVSRGGEVLLNNCLKRAKQLYNEGYEFKLHPHDFIPFFEETVTIEQYVELDEAVVTYYLEKWTKEDDAILSDLASRFINRDLFKYIPFDGSIITISELQELFEAGGINPDYYFVSEAFSDLPYDYDRPGSNRKPIHLLRQDGTIREISNQSLVIHSITGINRQDYKLYYPREMVAKIKDKTIREAIENLINKLN
>CP030136.1|QAZ54464.1|2140154_2140631_-|GNAT-family-N-acetyltransferase
MFKVRQATEKDVVQIRDVATKAWFNTYLNIYAATTVNHLLEASYNEHHLKKRLQEQLFLVVEEGNDIVGFANFIYGEELYLSAHYVKPESQHTGYGTALLNEGLSRFEDKFEGVYLEVDNKNEEAVAYYKEQGFTILRSYEPEMYGEKLDLALMYKAF
>CP030136.1|QAZ54465.1|2140799_2141336_-|flavodoxin-family-protein
MITVLFGGSRPNGNTAQLTKFALQDLEYQWIDVTQHQFKPIRDVRHTAETITSYDDDYLPILDKILASDTIIFASPVYWYSISAPLKAFIEHWSETLQDKRYPNFKAQMAEKDFRVILVGGDCPKIKAKPAITQMKYSLDFLGATLNGYIIGTAEKPGDIMKDNYALARATEWNSILQ
>CP030136.1|QAZ54466.1|2141546_2142485_-|aldo/keto-reductase
MKQFVNLGKSDVEVLPIALGTNAVGGHNLYPNLDEEQGKDVVRQAINHGINLLDTAYIYGPERSEELVGEVVKEYPREQIKIATKGSHEFDENQEVHQNNQPEYLKQQVENSLKRLQTDYIDLYYIHFPDDNTPKDQAVAALQELKEQGKIKAIGVSNFTLDQLKEANKDGYVDVVQLEYNLLHRENEAVLQYCVDHQITFIPYFPLASGILAGKYDENTKFSDHRTTRRDFIPGVFEENVRRVKALESIAAAHQTSIANIVLAFYLTRPAIDVIIPGAKRAEQVIENIKAADIVLSDDEIQYIDELFPIED
>CP030136.1|QAZ54467.1|2142754_2143381_-|DUF443-domain-containing-protein
MLLCESKIINKNPKYRIIKYNDEYLMVDIISTWISLFFPFINWFIPKEYVKISREEFENLNIVKPAKKNVFWPVAGSSALLGVALRKYTHLLDIQLDKKLVIAICCITFIGILIFYVRLIKKSSLNIYNTKNKRSKIFLIPTLKNVCFTLFGYILFGGLTMLFLDALLSMSYQNIIVYFVWIAVIMGFFLVNIALIIDKNIHVILKNQ

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP030136_6	6.1\|1176997\|28\|CP030136\|CRISPRCasFinder	1176997-1177024	28	CP030136.1	791273-791300	1	0.964
CP030136_6	6.1\|1176997\|28\|CP030136\|CRISPRCasFinder	1176997-1177024	28	CP030136.1	801966-801993	1	0.964
CP030136_6	6.1\|1176997\|28\|CP030136\|CRISPRCasFinder	1176997-1177024	28	CP030136.1	1356218-1356245	1	0.964
CP030136_6	6.1\|1176997\|28\|CP030136\|CRISPRCasFinder	1176997-1177024	28	CP030136.1	1576616-1576643	1	0.964
CP030136_6	6.1\|1176997\|28\|CP030136\|CRISPRCasFinder	1176997-1177024	28	CP030136.1	1762326-1762353	1	0.964
CP030136_6	6.1\|1176997\|28\|CP030136\|CRISPRCasFinder	1176997-1177024	28	CP030136.1	1879966-1879993	1	0.964
CP030136_6	6.1\|1176997\|28\|CP030136\|CRISPRCasFinder	1176997-1177024	28	CP030136.1	1963361-1963388	1	0.964
CP030136_6	6.1\|1176997\|28\|CP030136\|CRISPRCasFinder	1176997-1177024	28	CP030136.1	1970745-1970772	1	0.964
CP030136_6	6.1\|1176997\|28\|CP030136\|CRISPRCasFinder	1176997-1177024	28	CP030136.1	2425044-2425071	1	0.964
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	281739-281763	1	0.96
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	281797-281821	1	0.96
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	281855-281879	1	0.96
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	281913-281937	1	0.96
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	488315-488339	1	0.96
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	800602-800626	1	0.96
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	1356138-1356162	1	0.96
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	1445867-1445891	1	0.96
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	1762362-1762386	1	0.96
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	1762419-1762443	1	0.96
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	1970668-1970692	1	0.96
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	1976102-1976126	1	0.96
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	2424955-2424979	1	0.96
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	2626339-2626363	1	0.96
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	2626397-2626421	1	0.96
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	206914-206938	2	0.92
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	692654-692678	2	0.92
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	1044634-1044658	2	0.92
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	1141190-1141214	2	0.92
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	1141363-1141387	2	0.92
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	1441550-1441574	2	0.92
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	1660281-1660305	2	0.92
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	1859761-1859785	2	0.92
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	CP030136.1	2501408-2501432	2	0.92

1. spacer 6.1|1176997|28|CP030136|CRISPRCasFinder matches to position: 791273-791300, mismatch: 1, identity: 0.964

tcagcttactataatgtgcaagttgggg	CRISPR spacer
tcagcttacaataatgtgcaagttgggg	Protospacer
********* ******************

2. spacer 6.1|1176997|28|CP030136|CRISPRCasFinder matches to position: 801966-801993, mismatch: 1, identity: 0.964

tcagcttactataatgtgcaagttgggg	CRISPR spacer
tcagcttacaataatgtgcaagttgggg	Protospacer
********* ******************

3. spacer 6.1|1176997|28|CP030136|CRISPRCasFinder matches to position: 1356218-1356245, mismatch: 1, identity: 0.964

tcagcttactataatgtgcaagttgggg	CRISPR spacer
tcagcttacaataatgtgcaagttgggg	Protospacer
********* ******************

4. spacer 6.1|1176997|28|CP030136|CRISPRCasFinder matches to position: 1576616-1576643, mismatch: 1, identity: 0.964

tcagcttactataatgtgcaagttgggg	CRISPR spacer
tcagcttacaataatgtgcaagttgggg	Protospacer
********* ******************

5. spacer 6.1|1176997|28|CP030136|CRISPRCasFinder matches to position: 1762326-1762353, mismatch: 1, identity: 0.964

tcagcttactataatgtgcaagttgggg	CRISPR spacer
tcagcttacaataatgtgcaagttgggg	Protospacer
********* ******************

6. spacer 6.1|1176997|28|CP030136|CRISPRCasFinder matches to position: 1879966-1879993, mismatch: 1, identity: 0.964

tcagcttactataatgtgcaagttgggg	CRISPR spacer
tcagcttacaataatgtgcaagttgggg	Protospacer
********* ******************

7. spacer 6.1|1176997|28|CP030136|CRISPRCasFinder matches to position: 1963361-1963388, mismatch: 1, identity: 0.964

tcagcttactataatgtgcaagttgggg	CRISPR spacer
tcagcttacaataatgtgcaagttgggg	Protospacer
********* ******************

8. spacer 6.1|1176997|28|CP030136|CRISPRCasFinder matches to position: 1970745-1970772, mismatch: 1, identity: 0.964

tcagcttactataatgtgcaagttgggg	CRISPR spacer
tcagcttacgataatgtgcaagttgggg	Protospacer
********* ******************

9. spacer 6.1|1176997|28|CP030136|CRISPRCasFinder matches to position: 2425044-2425071, mismatch: 1, identity: 0.964

tcagcttactataatgtgcaagttgggg	CRISPR spacer
tcagcttacaataatgtgcaagttgggg	Protospacer
********* ******************

10. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 281739-281763, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

11. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 281797-281821, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

12. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 281855-281879, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

13. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 281913-281937, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

14. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 488315-488339, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

15. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 800602-800626, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

16. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 1356138-1356162, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

17. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 1445867-1445891, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

18. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 1762362-1762386, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

19. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 1762419-1762443, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

20. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 1970668-1970692, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

21. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 1976102-1976126, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

22. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 2424955-2424979, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacatagagaatttcgaaaagaaa	Protospacer
***** *******************

23. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 2626339-2626363, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

24. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 2626397-2626421, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

25. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 206914-206938, mismatch: 2, identity: 0.92

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaatgaaa	Protospacer
***** ************** ****

26. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 692654-692678, mismatch: 2, identity: 0.92

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacatagagaatttcgtaaagaaa	Protospacer
***** *********** *******

27. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 1044634-1044658, mismatch: 2, identity: 0.92

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacatggagaatttcgaaaagaaa	Protospacer
***** .******************

28. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 1141190-1141214, mismatch: 2, identity: 0.92

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacatagagaatttcgtaaagaaa	Protospacer
***** *********** *******

29. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 1141363-1141387, mismatch: 2, identity: 0.92

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgtaaagaaa	Protospacer
***** *********** *******

30. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 1441550-1441574, mismatch: 2, identity: 0.92

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgataagaaa	Protospacer
***** ************ ******

31. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 1660281-1660305, mismatch: 2, identity: 0.92

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacatagagaatttcaaaaagaaa	Protospacer
***** **********.********

32. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 1859761-1859785, mismatch: 2, identity: 0.92

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttctaaaagaaa	Protospacer
***** ********** ********

33. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to position: 2501408-2501432, mismatch: 2, identity: 0.92

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacaaagaatttcgaaaagaaa	Protospacer
***** *.*****************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP030136_8	8.1\|2516627\|25\|CP030136\|CRISPRCasFinder	2516627-2516651	25	LC371242	Escherichia phage EcS1 DNA, complete sequence	15447-15471	2	0.92
CP030136_5	5.1\|1046897\|27\|CP030136\|CRISPRCasFinder	1046897-1046923	27	KM359505	Prochlorococcus phage P-TIM68, complete genome	102710-102736	5	0.815
CP030136_2	2.1\|577026\|34\|CP030136\|CRISPRCasFinder	577026-577059	34	JN882286	Cronobacter phage vB_CsaP_GAP52, complete genome	23034-23067	8	0.765
CP030136_2	2.1\|577026\|34\|CP030136\|CRISPRCasFinder	577026-577059	34	CP030544	Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence	7567-7600	8	0.765

1. spacer 8.1|2516627|25|CP030136|CRISPRCasFinder matches to LC371242 (Escherichia phage EcS1 DNA, complete sequence) position: , mismatch: 2, identity: 0.92

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacaaaaagaatttcgtaaagaaa	Protospacer
*******.********* *******

2. spacer 5.1|1046897|27|CP030136|CRISPRCasFinder matches to KM359505 (Prochlorococcus phage P-TIM68, complete genome) position: , mismatch: 5, identity: 0.815

ggtctgtagaatttcttttcgaaattc	CRISPR spacer
gatctgtataatttcttttggaaatag	Protospacer
*.****** ********** *****

3. spacer 2.1|577026|34|CP030136|CRISPRCasFinder matches to JN882286 (Cronobacter phage vB_CsaP_GAP52, complete genome) position: , mismatch: 8, identity: 0.765

cccagttgcaaacaataaagctaaagatatgcaa	CRISPR spacer
agcatataaaagctataaagctaaagatatgcaa	Protospacer
  **  *. **.* ********************

4. spacer 2.1|577026|34|CP030136|CRISPRCasFinder matches to CP030544 (Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

cccagttgcaaacaataaagctaaagatatgcaa	CRISPR spacer
tactgtttataacaataaagctaaagttattcaa	Protospacer
. * ***   **************** *** ***

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

12786 : 69633

Bacillus_phage(25.0%)

tRNA,protease,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAZ52435.1\|12786_14073_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.7e-88	51.2
QAZ52436.1\|14724_15420_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
QAZ52437.1\|15416_15746_+	AzlD domain-containing protein	NA	NA	NA	NA
QAZ52438.1\|16107_17076_+	alpha/beta fold hydrolase	NA	NA	NA	NA
QAZ52439.1\|17368_18307_+	DUF2232 domain-containing protein	NA	NA	NA	NA
QAZ52440.1\|18321_20289_+	DHH family phosphoesterase	NA	NA	NA	NA
QAZ52441.1\|20285_20732_+	50S ribosomal protein L9	NA	NA	NA	NA
QAZ52442.1\|20763_22164_+	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	5.4e-111	48.1
QAZ52443.1\|22213_22441_-	hypothetical protein	NA	NA	NA	NA
QAZ52444.1\|22441_23725_+	adenylosuccinate synthetase	L7Y4J5	Megavirus	1.8e-68	34.6
QAZ52445.1\|24920_25622_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	3.5e-42	39.2
QAZ52446.1\|25634_27461_+	cell wall metabolism sensor histidine kinase WalK	W8CYF6	Bacillus_phage	1.6e-30	31.3
QAZ52447.1\|27453_28788_+	hypothetical protein	NA	NA	NA	NA
QAZ52448.1\|28788_29577_+	hypothetical protein	NA	NA	NA	NA
QAZ52449.1\|29972_30773_+	MBL fold metallo-hydrolase	A0A0C5AJ83	Bacteriophage	1.0e-37	35.9
QAZ52450.1\|30999_33318_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
QAZ52451.1\|33492_33687_-	hypothetical protein	NA	NA	NA	NA
QAZ52452.1\|33685_34165_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA
QAZ55095.1\|35289_35520_+	DUF2975 domain-containing protein	NA	NA	NA	NA
QAZ52453.1\|35527_35734_+	transcriptional regulator	NA	NA	NA	NA
QAZ52454.1\|36082_37186_+	DUF418 domain-containing protein	NA	NA	NA	NA
QAZ52455.1\|37205_37934_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
QAZ52456.1\|38133_39228_+\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	6.9e-37	33.9
QAZ52457.1\|40515_40956_+	hypothetical protein	NA	NA	NA	NA
QAZ52458.1\|41057_41279_+	hypothetical protein	NA	NA	NA	NA
QAZ52459.1\|41262_41646_+	hypothetical protein	A0A0P0I4A4	Acinetobacter_phage	5.2e-16	34.7
QAZ52460.1\|41664_41766_+	hypothetical protein	NA	NA	NA	NA
QAZ52461.1\|41809_42211_-	hypothetical protein	NA	NA	NA	NA
QAZ52462.1\|44806_45901_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	6.9e-37	33.9
QAZ52463.1\|46100_46829_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
QAZ52464.1\|46848_47952_-	DUF418 domain-containing protein	NA	NA	NA	NA
QAZ52465.1\|48300_48507_-	transcriptional regulator	NA	NA	NA	NA
QAZ55096.1\|48514_48745_-	DUF2975 domain-containing protein	NA	NA	NA	NA
QAZ52466.1\|50364_50622_-	hypothetical protein	NA	NA	NA	NA
QAZ52467.1\|50689_52480_-	DUF927 domain-containing protein	NA	NA	NA	NA
QAZ52468.1\|52605_54033_-	hypothetical protein	NA	NA	NA	NA
QAZ52469.1\|54149_54914_+	hypothetical protein	NA	NA	NA	NA
QAZ52470.1\|54903_56019_+\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A1C3S747	Escherichia_phage	3.9e-11	24.3
QAZ52471.1\|56180_57404_+	hypothetical protein	NA	NA	NA	NA
QAZ52472.1\|57944_58244_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
QAZ55097.1\|59092_59446_+	hypothetical protein	NA	NA	NA	NA
QAZ52473.1\|59517_60978_+	hypothetical protein	NA	NA	NA	NA
QAZ52474.1\|61179_62256_+	hypothetical protein	NA	NA	NA	NA
QAZ52475.1\|62272_62647_+	hypothetical protein	NA	NA	NA	NA
QAZ52476.1\|62639_64253_+	DNA primase	NA	NA	NA	NA
QAZ52477.1\|64479_66165_+	recombinase family protein	A0A0S2SXR4	Bacillus_phage	1.0e-42	29.7
QAZ52478.1\|66253_66592_+	hypothetical protein	NA	NA	NA	NA
QAZ52479.1\|66593_66683_+	hypothetical protein	NA	NA	NA	NA
QAZ52480.1\|66684_66996_+	hypothetical protein	NA	NA	NA	NA
QAZ52481.1\|67011_67515_+	DUF1643 domain-containing protein	NA	NA	NA	NA
QAZ52482.1\|67528_67750_+	hypothetical protein	NA	NA	NA	NA
QAZ52483.1\|67934_68678_+	hypothetical protein	NA	NA	NA	NA
QAZ52484.1\|68958_69633_-\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	4.4e-127	98.2

DBSCAN-SWA_2

712487 : 755553

Staphylococcus_phage(65.0%)

capsid,integrase,terminase,transposase,protease

attL 712697:712715|attR 756212:756230

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAZ53099.1\|712487_713231_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
712697:712715	attL	NA	NA	NA	NA
QAZ53100.1\|713405_713690_+	co-chaperone GroES	A0A221S386	uncultured_virus	4.7e-14	46.2
QAZ53101.1\|713765_715382_+	molecular chaperone GroEL	A0A240F779	uncultured_virus	3.4e-157	54.7
QAZ53102.1\|715450_716623_-\|integrase	site-specific integrase	A0A1W6JQD3	Staphylococcus_phage	1.0e-219	97.9
QAZ53103.1\|716636_717311_-	XRE family transcriptional regulator	A0A2H4JGT9	uncultured_Caudovirales_phage	1.6e-39	45.8
QAZ53104.1\|717483_717702_+	transcriptional regulator	A0A2H4JB11	uncultured_Caudovirales_phage	9.8e-20	66.7
QAZ53105.1\|717706_718024_+	helix-turn-helix domain-containing protein	A0A1W6JQE0	Staphylococcus_phage	9.2e-51	98.1
QAZ53106.1\|718020_718176_+	pathogenicity island protein	NA	NA	NA	NA
QAZ53107.1\|718160_718364_+	pathogenicity island protein	A0A1W6JQF4	Staphylococcus_phage	1.3e-29	97.0
QAZ53108.1\|718365_718776_+	pathogenicity island protein	A0A2H4JBF1	uncultured_Caudovirales_phage	2.2e-60	87.3
QAZ53109.1\|718776_719070_+	pathogenicity island protein	A0A1W6JQH0	Staphylococcus_phage	6.5e-43	98.9
QAZ53110.1\|719157_720027_+	mobile element-associated protein	A0A1W6JQL5	Staphylococcus_phage	1.3e-158	94.5
QAZ53111.1\|720043_721513_+	virulence-associated protein E	A0A1W6JQD6	Staphylococcus_phage	3.1e-290	99.8
QAZ53112.1\|721798_722143_+	pathogenicity island protein	A0A1W6JQD5	Staphylococcus_phage	1.4e-60	97.3
QAZ53113.1\|722367_722574_+	hypothetical protein	NA	NA	NA	NA
QAZ53114.1\|722560_723619_+\|capsid	phage capsid protein	NA	NA	NA	NA
QAZ53115.1\|723784_724276_+	pathogenicity island protein	A0A2H4JB26	uncultured_Caudovirales_phage	3.0e-24	39.9
QAZ55125.1\|724272_724428_+\|terminase	terminase	Q4ZE85	Staphylococcus_phage	2.2e-21	96.0
QAZ53116.1\|724643_725756_+	hypothetical protein	NA	NA	NA	NA
QAZ53117.1\|725739_726327_+	hypothetical protein	NA	NA	NA	NA
QAZ53118.1\|727587_728523_-	permease	NA	NA	NA	NA
QAZ53119.1\|729636_730944_-	TrkH family potassium uptake protein	NA	NA	NA	NA
QAZ53120.1\|731104_732016_+	ferrichrome ABC transporter substrate-binding protein	NA	NA	NA	NA
QAZ53121.1\|732077_732869_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
QAZ53122.1\|733293_734517_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
QAZ53123.1\|734951_736007_+	bi-component leukocidin LukGH subunit H	A0A2I6PDF3	Staphylococcus_phage	1.3e-35	32.1
QAZ53124.1\|736028_737084_+	bi-component leukocidin LukGH subunit G	A0A1X9IGW5	Staphylococcus_phage	9.0e-26	30.6
QAZ53125.1\|737282_738275_-	sphingomyelin phosphodiesterase	A0A1P8L6H7	Staphylococcus_phage	2.4e-161	99.6
QAZ53126.1\|738663_740412_+	MAP domain-containing protein	NA	NA	NA	NA
QAZ53127.1\|740422_740713_+	MAP domain-containing protein	NA	NA	NA	NA
QAZ53128.1\|741036_742323_-	aspartate aminotransferase	NA	NA	NA	NA
QAZ53129.1\|742522_742621_+	hypothetical protein	NA	NA	NA	NA
QAZ53130.1\|742863_743040_+	hypothetical protein	NA	NA	NA	NA
QAZ53131.1\|743298_743679_+	GntR family transcriptional regulator	NA	NA	NA	NA
QAZ53132.1\|743675_744572_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	A0A2H4PQG7	Staphylococcus_phage	1.1e-16	30.2
QAZ53133.1\|744572_745253_+	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA
QAZ53134.1\|745249_746122_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	A0A2H4PQG7	Staphylococcus_phage	6.1e-28	35.2
QAZ53135.1\|746121_746862_+	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA
QAZ53136.1\|746927_747491_-	thioredoxin family protein	NA	NA	NA	NA
QAZ53137.1\|747611_748136_+	hypothetical protein	NA	NA	NA	NA
QAZ53138.1\|748195_748753_+	DUF1700 domain-containing protein	NA	NA	NA	NA
QAZ53139.1\|748749_749592_+	hypothetical protein	NA	NA	NA	NA
QAZ53140.1\|749648_750689_-	linear amide C-N hydrolase	NA	NA	NA	NA
QAZ53141.1\|751139_751313_+	hypothetical protein	NA	NA	NA	NA
QAZ53142.1\|752335_753487_+\|transposase	transposase	P97010	Streptococcus_pyogenes_phage	1.8e-11	31.6
QAZ55126.1\|753525_755553_+\|transposase	transposase	NA	NA	NA	NA
756212:756230	attR	NA	NA	NA	NA

DBSCAN-SWA_3

811891 : 888450

Staphylococcus_phage(90.0%)

tRNA,head,tail,capsid,integrase,terminase,holin,protease,portal

attL 804347:804363|attR 854927:854943

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
804347:804363	attL	NA	NA	NA	NA
QAZ53198.1\|811891_812938_-\|integrase	site-specific integrase	Q38045	Staphylococcus_phage	2.8e-197	97.7
QAZ53199.1\|812999_813503_-	hypothetical protein	W5R8I5	Staphylococcus_phage	3.9e-43	96.4
QAZ53200.1\|813521_813983_-	toxin	A0A2K9VBR7	Staphylococcus_phage	6.0e-83	99.3
QAZ53201.1\|813995_814310_-	XRE family transcriptional regulator	A0A0N9BAW4	Staphylococcus_phage	9.8e-53	100.0
QAZ53202.1\|814461_814698_+	XRE family transcriptional regulator	A0A2I6PD81	Staphylococcus_phage	1.5e-37	100.0
QAZ53203.1\|814711_815488_+	transcriptional regulator	A0A2I6PD87	Staphylococcus_phage	1.1e-140	100.0
QAZ53204.1\|815516_815660_+	hypothetical protein	W5R8I6	Staphylococcus_phage	2.5e-16	100.0
QAZ53205.1\|815669_816323_-	hypothetical protein	Q4ZBF5	Staphylococcus_virus	2.9e-115	99.1
QAZ53206.1\|816394_816616_+	hypothetical protein	A0A1X9H0Q4	Staphylococcus_phage	1.5e-31	100.0
QAZ53207.1\|816608_816770_+	DUF1270 family protein	D2JGJ6	Staphylococcus_phage	4.3e-20	100.0
QAZ53208.1\|816862_817165_+	DUF2482 family protein	A0A0F6N3N3	Staphylococcus_phage	1.4e-48	100.0
QAZ53209.1\|817169_817430_+	DUF1108 family protein	A1KX65	Staphylococcus_virus	2.6e-43	98.8
QAZ53210.1\|817439_817661_+	DUF2483 domain-containing protein	A7TWM6	Staphylococcus_phage	3.2e-34	100.0
QAZ53211.1\|817653_818277_+	DUF1071 domain-containing protein	A0A2H4PQQ6	Staphylococcus_phage	1.4e-114	100.0
QAZ53212.1\|818276_818705_+	single-stranded DNA-binding protein	B2ZYV4	Staphylococcus_phage	9.5e-59	97.9
QAZ53213.1\|818718_819414_+	hypothetical protein	A0A2H4JAQ0	uncultured_Caudovirales_phage	4.0e-131	98.3
QAZ53214.1\|819385_820207_+	replication protein	A0A0H3U476	Staphylococcus_phage	5.6e-124	97.8
QAZ53215.1\|820219_821005_+	DNA replication protein DnaC	A0A2I6PDV5	Staphylococcus_phage	1.6e-144	99.6
QAZ53216.1\|821001_821160_+	hypothetical protein	A0A0H3U301	Staphylococcus_phage	4.5e-22	98.1
QAZ53217.1\|821172_821394_+	DUF3269 family protein	Q9G021	Staphylococcus_phage	4.9e-35	98.6
QAZ53218.1\|821404_821809_+	DUF1064 domain-containing protein	A0A059T5A5	Staphylococcus_phage	7.1e-72	97.0
QAZ53219.1\|821813_821999_+	hypothetical protein	A0A059T620	Staphylococcus_phage	4.6e-26	95.1
QAZ53220.1\|821999_822617_+	hypothetical protein	A0A0H3U4U9	Staphylococcus_phage	4.2e-84	100.0
QAZ53221.1\|822616_822871_+	DUF3310 domain-containing protein	A7TWG9	Staphylococcus_phage	2.2e-42	100.0
QAZ53222.1\|822870_823119_+	hypothetical protein	A0A2K9VBX5	Staphylococcus_phage	1.2e-40	100.0
QAZ53223.1\|823132_823339_+	hypothetical protein	A0A2K9VBT9	Staphylococcus_phage	3.0e-34	100.0
QAZ53224.1\|823341_823746_+	hypothetical protein	A0A0E3T8H9	Staphylococcus_phage	4.6e-71	99.3
QAZ53225.1\|823742_823937_+	hypothetical protein	A0A0E3XCV8	Staphylococcus_phage	2.5e-27	100.0
QAZ53226.1\|823933_824386_+	hypothetical protein	A0A0E3XBJ3	Staphylococcus_phage	1.4e-81	100.0
QAZ53227.1\|824382_824784_+	acetyltransferase	A0A0E3T9I2	Staphylococcus_phage	1.3e-54	100.0
QAZ53228.1\|824780_825128_+	hypothetical protein	D2JGL4	Staphylococcus_phage	5.9e-59	100.0
QAZ53229.1\|825124_825433_+	hypothetical protein	Q4ZBK6	Staphylococcus_phage	2.4e-51	99.0
QAZ53230.1\|825425_825677_+	DUF1024 family protein	M9NRI5	Staphylococcus_phage	7.1e-38	97.6
QAZ53231.1\|826016_826523_+	dUTPase	G4KNP5	Staphylococcus_phage	1.0e-91	100.0
QAZ53232.1\|826559_826766_+	DUF1381 domain-containing protein	A0A0H3U2R7	Staphylococcus_phage	2.2e-29	98.5
QAZ53233.1\|826762_827149_+	hypothetical protein	A0A0N9BB01	Staphylococcus_phage	3.0e-64	98.4
QAZ53234.1\|827145_827298_+	transcriptional regulator	A7TWI2	Staphylococcus_phage	4.4e-19	98.0
QAZ53235.1\|827365_827566_+	DUF1514 domain-containing protein	A0A2I6PF41	Staphylococcus_phage	1.1e-25	98.5
QAZ53236.1\|827617_830065_+	hypothetical protein	A0A2I6PDP5	Staphylococcus_phage	0.0e+00	98.4
QAZ53237.1\|830166_830271_-	hypothetical protein	A0A2I6PDP6	Staphylococcus_phage	1.8e-11	94.1
QAZ55129.1\|830404_830695_+	VRR-NUC domain-containing protein	U5U7A3	Staphylococcus_phage	4.9e-51	100.0
QAZ53238.1\|830675_832043_+	ATP-dependent helicase	A0A2I6PE95	Staphylococcus_phage	2.5e-262	99.6
QAZ53239.1\|832055_832493_+	transcriptional regulator	A0A2I6PEB8	Staphylococcus_phage	1.8e-76	99.3
QAZ53240.1\|832649_832964_+	HNH endonuclease	Q4ZCU3	Staphylococcus_virus	2.5e-56	100.0
QAZ53241.1\|833091_833397_+\|terminase	phage terminase small subunit P27 family	A0A2I6PEQ6	Staphylococcus_phage	2.9e-49	100.0
QAZ53242.1\|833386_835078_+\|terminase	terminase large subunit	A0A2I6PE99	Staphylococcus_phage	0.0e+00	99.6
QAZ53243.1\|835082_836321_+\|portal	phage portal protein	A0A2K9VBP0	Staphylococcus_phage	6.9e-235	100.0
QAZ53244.1\|836304_837078_+\|protease	Clp protease ClpP	A0A2I6PE26	Staphylococcus_phage	4.3e-134	97.3
QAZ53245.1\|837089_838253_+\|capsid	phage major capsid protein	A0A0K1LKB5	Staphylococcus_phage	6.8e-216	99.5
QAZ53246.1\|838321_838600_+\|head,tail	phage gp6-like head-tail connector protein	A0A2I6PEQ1	Staphylococcus_phage	2.1e-46	100.0
QAZ53247.1\|838611_838944_+	hypothetical protein	A0A2I6PES3	Staphylococcus_phage	4.1e-57	100.0
QAZ53248.1\|838940_839342_+	hypothetical protein	A0A0K1LL98	Staphylococcus_phage	4.0e-67	99.2
QAZ53249.1\|839342_839738_+	DUF3168 domain-containing protein	R4WAV1	Staphylococcus_phage	4.4e-66	99.2
QAZ53250.1\|839772_840414_+\|tail	phage tail protein	A0A2I6PE59	Staphylococcus_phage	5.0e-120	99.1
QAZ53251.1\|840505_840961_+\|tail	phage tail protein	A0A2I6PF45	Staphylococcus_phage	1.1e-76	99.3
QAZ53252.1\|841018_841369_+	hypothetical protein	A0A2I6PDE6	Staphylococcus_phage	1.1e-55	100.0
QAZ53253.1\|841410_841569_+	hypothetical protein	A0A2I6PES8	Staphylococcus_phage	1.2e-19	100.0
QAZ53254.1\|841582_847783_+\|tail	phage tail tape measure protein	M1TB03	Staphylococcus_phage	0.0e+00	98.8
QAZ53255.1\|847782_848607_+\|tail	phage tail family protein	A0A2I6PER3	Staphylococcus_phage	7.8e-158	98.9
QAZ53256.1\|848615_850199_+	peptidase	Q8SDP1	Staphylococcus_virus	1.0e-307	99.8
QAZ53257.1\|850198_850489_+	hypothetical protein	A0A2I6PF46	Staphylococcus_phage	2.1e-49	100.0
QAZ53258.1\|850504_852415_+	hypothetical protein	A0A2I6PF35	Staphylococcus_phage	0.0e+00	100.0
QAZ53259.1\|852414_853881_+	DUF2479 domain-containing protein	A0A2I6PEI6	Staphylococcus_phage	4.2e-255	93.2
QAZ53260.1\|853880_854270_+	DUF2977 domain-containing protein	A0A2I6PER1	Staphylococcus_phage	2.2e-62	100.0
QAZ53261.1\|854262_854427_+	XkdX family protein	A0A2I6PES4	Staphylococcus_phage	4.9e-24	100.0
QAZ53262.1\|854472_854772_+	DUF2951 domain-containing protein	A0A2I6PER2	Staphylococcus_phage	2.0e-31	100.0
QAZ53263.1\|854907_855345_+\|holin	phage holin	B2ZZ05	Staphylococcus_phage	1.2e-72	99.3
854927:854943	attR	NA	NA	NA	NA
QAZ53264.1\|855325_856771_+	CHAP domain-containing protein	A0A0H4ITZ3	Staphylococcus_phage	5.5e-284	96.3
QAZ53265.1\|856860_857361_-	hypothetical protein	NA	NA	NA	NA
QAZ55130.1\|858090_858171_-	hypothetical protein	NA	NA	NA	NA
QAZ53266.1\|858517_858679_+	hypothetical protein	NA	NA	NA	NA
QAZ53267.1\|858809_859325_+	type 1 glutamine amidotransferase	NA	NA	NA	NA
QAZ53268.1\|859665_860475_+	monofunctional glycosyltransferase	NA	NA	NA	NA
QAZ53269.1\|860735_861554_+	regulatory protein RecX	NA	NA	NA	NA
QAZ53270.1\|861531_861846_+	DUF1811 family protein	NA	NA	NA	NA
QAZ53271.1\|861860_863378_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
QAZ53272.1\|863386_864223_+	hypothetical protein	NA	NA	NA	NA
QAZ53273.1\|864149_864380_-	hypothetical protein	NA	NA	NA	NA
QAZ53274.1\|864483_865461_-	metal-dependent hydrolase	NA	NA	NA	NA
QAZ53275.1\|865612_866650_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
QAZ53276.1\|866951_867494_+	DUF402 domain-containing protein	NA	NA	NA	NA
QAZ53277.1\|867785_869522_+	SAV1866 family putative multidrug efflux ABC transporter	W8CYL7	Bacillus_phage	1.7e-53	30.4
QAZ53278.1\|869530_869623_+	hypothetical protein	NA	NA	NA	NA
QAZ55131.1\|869712_870807_-	aromatic acid exporter family protein	NA	NA	NA	NA
QAZ53279.1\|871099_872389_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
QAZ53280.1\|872469_872925_+	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA
QAZ53281.1\|872930_873881_+	hydroxyacid dehydrogenase	NA	NA	NA	NA
QAZ53282.1\|873977_874424_+	transcriptional repressor	NA	NA	NA	NA
QAZ53283.1\|883205_884267_+	PTS transporter subunit IIC	NA	NA	NA	NA
QAZ53284.1\|884524_885982_+	ABC transporter permease subunit	NA	NA	NA	NA
QAZ53285.1\|885968_886697_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.0e-36	42.7
QAZ53286.1\|886832_887975_+\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
QAZ53287.1\|887979_888450_+\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA

DBSCAN-SWA_4

938690 : 973194

Staphylococcus_phage(90.62%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAZ53336.1\|938690_939443_-	hypothetical protein	A0A097PAT7	Streptococcus_pyogenes_phage	4.4e-51	47.2
QAZ53337.1\|939469_940240_-	exotoxin	A0EX09	Staphylococcus_phage	4.3e-25	33.5
QAZ53338.1\|940239_940866_-	hypothetical protein	A0A2H4PQM7	Staphylococcus_phage	3.9e-93	93.8
QAZ53339.1\|940939_941935_-	DUF4352 domain-containing protein	A0A2H4PQN2	Staphylococcus_phage	4.2e-73	97.2
QAZ53340.1\|942015_942666_-	calcium-binding protein	A0A2H4PQM8	Staphylococcus_phage	3.0e-56	99.1
QAZ55133.1\|942969_943425_+	DUF4909 domain-containing protein	A0A2H4PQN7	Staphylococcus_phage	1.2e-78	98.6
QAZ53341.1\|943583_945062_+	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	1.5e-289	100.0
QAZ53342.1\|945066_946068_+	o-succinylbenzoate synthase	A0A2H4PQM0	Staphylococcus_phage	9.7e-187	98.2
QAZ53343.1\|946064_946322_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	3.6e-45	98.8
QAZ53344.1\|946387_946861_+	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	3.0e-82	96.8
QAZ55134.1\|946865_947612_+	S9 family peptidase	A0A2H4PQM6	Staphylococcus_phage	2.9e-143	98.8
QAZ53345.1\|947989_949582_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	0.0e+00	100.0
QAZ53346.1\|949953_951147_+	S-adenosylmethionine synthase	A0A2H4PQS6	Staphylococcus_phage	1.9e-218	99.7
QAZ53347.1\|951271_952180_+	NERD domain-containing protein	A0A2H4PQQ8	Staphylococcus_phage	3.4e-138	100.0
QAZ53348.1\|952391_953225_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	7.8e-158	99.3
QAZ53349.1\|953236_953416_-	hypothetical protein	NA	NA	NA	NA
QAZ53350.1\|953607_953961_-	camphor resistance protein CrcB	A0A2H4PQQ7	Staphylococcus_phage	2.6e-22	100.0
QAZ53351.1\|953957_954323_-	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	3.6e-59	100.0
QAZ53352.1\|954578_954881_-	hypothetical protein	NA	NA	NA	NA
QAZ53353.1\|955140_955854_+	transaldolase	M1PR54	Cyanophage	5.5e-19	35.3
QAZ53354.1\|956293_956929_-\|protease	CPBP family intramembrane metalloprotease SdpA	NA	NA	NA	NA
QAZ53355.1\|957224_957668_+	hypothetical protein	A0A2H4PQT8	Staphylococcus_phage	3.5e-56	98.0
QAZ53356.1\|957654_958098_-	competence protein ComK	NA	NA	NA	NA
QAZ53357.1\|958210_958681_-	RNA polymerase sigma factor SigS	A0A2H4PQT5	Staphylococcus_phage	1.0e-82	99.4
QAZ53358.1\|958879_959104_+	hypothetical protein	NA	NA	NA	NA
QAZ53359.1\|959379_960234_+	autolysin	Q4ZCC7	Staphylococcus_virus	9.8e-39	38.6
QAZ53360.1\|960528_960924_-	protein ArsC	A0A2H4PQT9	Staphylococcus_phage	6.3e-73	100.0
QAZ53361.1\|960941_962234_-	arsenical efflux pump membrane protein ArsB	A0A2H4PQU3	Staphylococcus_phage	5.0e-228	99.5
QAZ53362.1\|962233_962548_-	ArsR family transcriptional regulator	A0A2H4PQT4	Staphylococcus_phage	9.8e-53	98.1
QAZ53363.1\|963070_964573_+	pyridine nucleotide-disulfide oxidoreductase	A0A2H4PQX2	Staphylococcus_phage	2.3e-30	100.0
QAZ55135.1\|965065_966097_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	2.0e-195	98.8
QAZ53364.1\|966103_966736_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	3.4e-113	100.0
QAZ53365.1\|966746_967928_+	riboflavin biosynthesis protein RibBA	A0A2H4PQS2	Staphylococcus_phage	1.7e-227	100.0
QAZ53366.1\|967940_968405_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	4.5e-70	100.0
QAZ53367.1\|968526_969528_-	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	3.1e-185	100.0
QAZ55136.1\|969436_969628_+	hypothetical protein	NA	NA	NA	NA
QAZ53368.1\|969639_969759_+	hypothetical protein	NA	NA	NA	NA
QAZ53369.1\|969761_970589_+	alpha/beta hydrolase	NA	NA	NA	NA
QAZ53370.1\|971159_971561_+	MarR family transcriptional regulator	NA	NA	NA	NA
QAZ53371.1\|971680_972244_-	methyltransferase domain-containing protein	A0A2H4PQV0	Staphylococcus_phage	8.3e-103	99.5
QAZ53372.1\|972240_973194_-	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	2.2e-79	100.0

DBSCAN-SWA_5

1103299 : 1162216

uncultured_Mediterranean_phage(16.67%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAZ53479.1\|1103299_1104385_+\|transposase	transposase	A0A0A8WIF9	Clostridium_phage	2.9e-11	25.7
QAZ55142.1\|1104387_1106301_+\|transposase	transposase	NA	NA	NA	NA
QAZ53480.1\|1106302_1106668_+\|transposase	transposase	NA	NA	NA	NA
QAZ53481.1\|1106950_1107367_-	flavodoxin family protein	NA	NA	NA	NA
QAZ53482.1\|1107544_1108972_-	chloramphenicol/florfenicol efflux MFS transporter FexA	NA	NA	NA	NA
QAZ53483.1\|1110027_1110312_+	hypothetical protein	NA	NA	NA	NA
QAZ53484.1\|1110428_1110626_-	hypothetical protein	NA	NA	NA	NA
QAZ53485.1\|1110785_1111259_+	DUF4930 family protein	NA	NA	NA	NA
QAZ53486.1\|1111332_1111452_+	hypothetical protein	NA	NA	NA	NA
QAZ53487.1\|1111650_1112493_+	rod shape-determining protein MreC	NA	NA	NA	NA
QAZ53488.1\|1112492_1113023_+	rod shape-determining protein MreD	NA	NA	NA	NA
QAZ53489.1\|1113258_1113567_+	50S ribosomal protein L21	NA	NA	NA	NA
QAZ53490.1\|1113572_1113893_+\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
QAZ53491.1\|1113904_1114189_+	50S ribosomal protein L27	NA	NA	NA	NA
QAZ53492.1\|1114672_1115965_+	GTPase ObgE	NA	NA	NA	NA
QAZ53493.1\|1115977_1116433_+	ACT domain-containing protein	NA	NA	NA	NA
QAZ53494.1\|1116446_1117049_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
QAZ53495.1\|1117080_1118085_+	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	1.7e-05	29.1
QAZ53496.1\|1118086_1119112_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
QAZ53497.1\|1119134_1120274_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	5.4e-85	44.7
QAZ53498.1\|1120292_1120553_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	8.2e-05	35.3
QAZ53499.1\|1120827_1123107_+	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	1.8e-31	35.8
QAZ53500.1\|1123309_1125583_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	1.1e-63	29.1
QAZ53501.1\|1125604_1126123_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	5.6e-29	46.5
QAZ53502.1\|1126550_1128740_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A2I2L310	Orpheovirus	6.9e-12	37.7
QAZ53503.1\|1128751_1129204_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
QAZ53504.1\|1129200_1130076_+	cell wall amidase	A0A0N9SGH1	Paenibacillus_phage	4.7e-12	33.7
QAZ53505.1\|1130536_1131799_+\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
QAZ53506.1\|1131814_1133581_+\|tRNA	aspartate--tRNA ligase	A0A2K9L0E9	Tupanvirus	1.3e-16	27.3
QAZ53507.1\|1133913_1134042_+	hypothetical protein	NA	NA	NA	NA
QAZ53508.1\|1134041_1134815_+\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	NA	NA	NA	NA
QAZ53509.1\|1134975_1136250_-	replication-associated recombination protein A	A0A127AWE7	Bacillus_phage	1.4e-105	50.7
QAZ53510.1\|1136334_1136757_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
QAZ53511.1\|1136856_1137039_+	CsbD family protein	NA	NA	NA	NA
QAZ53512.1\|1137078_1137225_+	hypothetical protein	NA	NA	NA	NA
QAZ53513.1\|1137461_1138475_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
QAZ53514.1\|1138786_1139929_+	cysteine desulfurase	A0A1X7QGF3	Faustovirus	8.3e-33	29.3
QAZ53515.1\|1139929_1141048_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
QAZ53516.1\|1141682_1142351_+	tetratricopeptide repeat protein	NA	NA	NA	NA
QAZ53517.1\|1142352_1144830_+	ATP-dependent RecD-like DNA helicase	A0A0K2FLP8	Brevibacillus_phage	1.1e-66	29.0
QAZ53518.1\|1145172_1147803_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	3.2e-64	34.4
QAZ53519.1\|1147865_1148126_+	IreB family regulatory phosphoprotein	NA	NA	NA	NA
QAZ53520.1\|1148129_1148558_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
QAZ53521.1\|1148572_1148881_+	DUF1292 domain-containing protein	NA	NA	NA	NA
QAZ53522.1\|1149165_1149804_+	O-methyltransferase	A0A2P1JQT7	Mycobacterium_phage	1.6e-09	28.8
QAZ53523.1\|1149806_1150730_+	U32 family peptidase	NA	NA	NA	NA
QAZ53524.1\|1150741_1152010_+\|protease	collagenase-like protease	Q6DW11	Phage_TP	4.0e-36	31.7
QAZ53525.1\|1152009_1152633_+	uridine kinase	A0A1V0SAA3	Catovirus	2.8e-35	41.1
QAZ53526.1\|1152660_1153137_+	transcription elongation factor GreA	NA	NA	NA	NA
QAZ53527.1\|1153462_1154197_+	allophanate hydrolase	NA	NA	NA	NA
QAZ53528.1\|1154186_1155197_+	allophanate hydrolase subunit 2 family protein	NA	NA	NA	NA
QAZ53529.1\|1155198_1155648_+	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit	NA	NA	NA	NA
QAZ53530.1\|1155661_1157023_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
QAZ53531.1\|1157022_1157775_+	LamB/YcsF family protein	NA	NA	NA	NA
QAZ53532.1\|1157786_1159016_+	divalent metal cation transporter	NA	NA	NA	NA
QAZ53533.1\|1160276_1160669_-	NimC/NimA family protein	NA	NA	NA	NA
QAZ53534.1\|1160953_1162216_-\|transposase	IS1380-like element ISEnca1 family transposase	A0A1B0VDR3	Salmonella_phage	1.2e-35	92.9

DBSCAN-SWA_6

1197138 : 1205468

Caulobacter_phage(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAZ53572.1\|1197138_1198956_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	3.6e-54	36.0
QAZ53573.1\|1199179_1200286_+	RNA polymerase sigma factor SigA	A0A2I7SAT0	Vibrio_phage	1.1e-37	38.1
QAZ53574.1\|1200416_1201094_+\|tRNA	tRNA (adenine-N(1))-methyltransferase	NA	NA	NA	NA
QAZ53575.1\|1201096_1202197_+	Nif3-like dinuclear metal center hexameric protein	A0A1S5V250	Saudi_moumouvirus	5.2e-08	29.6
QAZ53576.1\|1202310_1203657_+	DEAD/DEAH box family ATP-dependent RNA helicase	A0A1V0SIR5	Klosneuvirus	2.4e-55	34.0
QAZ53577.1\|1203666_1204557_+	endonuclease	A0A2H4UU70	Bodo_saltans_virus	3.4e-26	36.0
QAZ53578.1\|1204682_1205468_+	metal ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.7e-19	28.3

DBSCAN-SWA_7

1480889 : 1496895

Staphylococcus_phage(60.87%)

head,terminase,portal,integrase

attL 1478886:1478903|attR 1503155:1503172

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1478886:1478903	attL	NA	NA	NA	NA
QAZ53825.1\|1480889_1482233_-\|head	phage head morphogenesis protein	A0A1J0MFV1	Staphylococcus_phage	1.3e-138	56.8
QAZ53826.1\|1482242_1483670_-\|portal	phage portal protein	Q4ZE36	Staphylococcus_virus	6.8e-194	71.7
QAZ53827.1\|1483682_1484957_-\|terminase	PBSX family phage terminase large subunit	Q4ZE37	Staphylococcus_virus	3.2e-195	76.2
QAZ53828.1\|1484943_1485372_-	helix-turn-helix domain-containing protein	A1EAE0	Streptococcus_phage	1.1e-25	45.1
QAZ53829.1\|1485524_1486013_-	RNA polymerase subunit sigma-70	R9TMH4	Paenibacillus_phage	8.7e-08	28.3
QAZ53830.1\|1486055_1486289_-	hypothetical protein	NA	NA	NA	NA
QAZ53831.1\|1486289_1486754_-	hypothetical protein	C9E2P0	Enterococcus_phage	3.2e-20	43.0
QAZ53832.1\|1486750_1486858_-	DUF1381 domain-containing protein	C8CH06	Staphylococcus_phage	1.2e-07	87.5
QAZ53833.1\|1486988_1487519_-	nucleotide pyrophosphohydrolase	A0A1P8VVP1	Streptococcus_phage	2.3e-22	39.1
QAZ53834.1\|1487511_1487823_-	hypothetical protein	NA	NA	NA	NA
QAZ53835.1\|1487828_1487987_-	hypothetical protein	A0A0E3T9L7	Staphylococcus_phage	6.7e-18	90.4
QAZ53836.1\|1488001_1488292_-	hypothetical protein	A0A223LIA9	Staphylococcus_phage	7.2e-18	58.1
QAZ53837.1\|1488292_1489195_-	DnaD domain protein	A0A1P8L6F0	Staphylococcus_phage	2.9e-49	52.0
QAZ55150.1\|1489207_1489702_-	single-stranded DNA-binding protein	A7TWM8	Staphylococcus_phage	6.4e-83	94.0
QAZ53838.1\|1489782_1490562_-	chromosomal replication initiator DnaA	A0A1W6JPW0	Staphylococcus_phage	2.3e-127	88.0
QAZ53839.1\|1490562_1491099_-	hypothetical protein	A0A0H3U480	Staphylococcus_phage	4.8e-76	81.9
QAZ53840.1\|1491103_1491370_-	hypothetical protein	A0A2I6PDG2	Staphylococcus_phage	3.0e-18	53.6
QAZ53841.1\|1491359_1491677_-	DUF2482 family protein	W5RAK4	Staphylococcus_phage	1.6e-39	80.6
QAZ53842.1\|1491763_1491925_-	DUF1270 family protein	R4IH12	Staphylococcus_phage	1.1e-12	69.8
QAZ53843.1\|1492023_1492707_-	phage repressor protein	A9CR56	Staphylococcus_phage	5.2e-107	85.6
QAZ53844.1\|1492767_1492974_+	hypothetical protein	A1BTY8	Staphylococcus_virus	3.3e-25	75.0
QAZ53845.1\|1493397_1493673_-	hypothetical protein	NA	NA	NA	NA
QAZ53846.1\|1493699_1493918_-	DUF739 family protein	A0A2I6PE94	Staphylococcus_phage	4.9e-19	62.5
QAZ53847.1\|1494085_1494478_+	helix-turn-helix domain-containing protein	A0A2I6PE55	Staphylococcus_phage	1.6e-28	53.6
QAZ53848.1\|1494624_1495008_+	hypothetical protein	NA	NA	NA	NA
QAZ53849.1\|1495019_1495715_+	hypothetical protein	A0A2H4J5B8	uncultured_Caudovirales_phage	1.4e-06	50.3
QAZ53850.1\|1495767_1496895_+\|integrase	site-specific integrase	A0A0C5AN64	Paenibacillus_phage	6.2e-33	31.4
1503155:1503172	attR	NA	NA	NA	NA

DBSCAN-SWA_8

1752359 : 1760832

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAZ54089.1\|1752359_1752926_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.1e-29	40.1
QAZ54090.1\|1752928_1753957_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	2.0e-62	41.7
QAZ54091.1\|1753949_1755434_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.2e-45	31.7
QAZ54092.1\|1755412_1757602_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	3.5e-141	39.8
QAZ54093.1\|1757594_1758266_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
QAZ54094.1\|1758267_1758531_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
QAZ54095.1\|1758530_1759235_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	M4R1E8	Synechococcus_phage	7.3e-48	42.1
QAZ54096.1\|1759238_1760363_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
QAZ54097.1\|1760349_1760832_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	6.2e-22	44.7

DBSCAN-SWA_9

1779899 : 1798495

Staphylococcus_phage(50.0%)

holin,bacteriocin,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAZ54113.1\|1779899_1780910_+\|protease	serine protease	A0A2H4PQP7	Staphylococcus_phage	6.2e-16	32.3
QAZ54114.1\|1780991_1782173_+\|protease	cysteine protease staphopain B	NA	NA	NA	NA
QAZ54115.1\|1782210_1782540_+	staphostatin B	NA	NA	NA	NA
QAZ54116.1\|1782777_1783599_-	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA
QAZ54117.1\|1783591_1784395_-	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA
QAZ54118.1\|1784381_1786055_-	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA
QAZ54119.1\|1786041_1787253_-	isochorismate synthase	NA	NA	NA	NA
QAZ54120.1\|1787329_1787434_-	hypothetical protein	NA	NA	NA	NA
QAZ54121.1\|1787584_1788523_+	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
QAZ54122.1\|1788574_1789126_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
QAZ54123.1\|1789215_1789506_+	NINE protein	A0A060AN66	Enterococcus_phage	7.5e-07	38.0
QAZ54124.1\|1789569_1789701_+	hypothetical protein	NA	NA	NA	NA
QAZ54125.1\|1791194_1791551_+	DoxX family protein	NA	NA	NA	NA
QAZ54126.1\|1791639_1791777_-	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA
QAZ54127.1\|1791917_1792208_+	hypothetical protein	NA	NA	NA	NA
QAZ54128.1\|1792295_1792937_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.7e-19	33.0
QAZ54129.1\|1792933_1793254_-	YxeA family protein	NA	NA	NA	NA
QAZ54130.1\|1795100_1796273_-\|transposase	IS256 family transposase IS256	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
QAZ54131.1\|1796358_1796550_-	hypothetical protein	NA	NA	NA	NA
QAZ55160.1\|1796593_1796866_-\|bacteriocin	lactococcin 972 family bacteriocin	NA	NA	NA	NA
QAZ54132.1\|1796875_1796977_-	hypothetical protein	NA	NA	NA	NA
QAZ55161.1\|1797515_1797593_-\|holin	putative holin-like toxin	NA	NA	NA	NA
QAZ54133.1\|1797892_1798495_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_10

2004652 : 2019383

uncultured_Caudovirales_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAZ54332.1\|2004652_2005414_-	ATP-binding cassette domain-containing protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	8.5e-18	31.6
QAZ54333.1\|2005410_2006367_-	iron ABC transporter permease	A0A2H4J116	uncultured_Caudovirales_phage	1.2e-05	57.8
QAZ55165.1\|2006353_2007325_-	ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	9.5e-139	78.9
QAZ54334.1\|2007795_2007900_-	hypothetical protein	NA	NA	NA	NA
QAZ54335.1\|2008032_2009004_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A2H4J4P3	uncultured_Caudovirales_phage	4.2e-171	91.3
QAZ54336.1\|2009121_2011227_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A2H4J2N6	uncultured_Caudovirales_phage	0.0e+00	91.7
QAZ54337.1\|2011189_2011588_-	protein NrdI	A0A2H4J545	uncultured_Caudovirales_phage	1.2e-52	72.0
QAZ54338.1\|2011737_2012004_-	ribonucleoside-diphosphate reductase	NA	NA	NA	NA
QAZ54339.1\|2012388_2013255_+	DMT family transporter	NA	NA	NA	NA
QAZ54340.1\|2013274_2013775_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	5.9e-52	71.5
QAZ54341.1\|2013804_2014050_+	hypothetical protein	NA	NA	NA	NA
QAZ54342.1\|2014115_2015621_+	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	2.0e-58	32.2
QAZ54343.1\|2015698_2015800_-	hypothetical protein	NA	NA	NA	NA
QAZ54344.1\|2015890_2016808_+	lipid kinase	A0A1V0SBJ0	Catovirus	3.7e-07	22.0
QAZ54345.1\|2017220_2017316_-	hypothetical protein	NA	NA	NA	NA
QAZ54346.1\|2017487_2018030_-	5'(3')-deoxyribonucleotidase	NA	NA	NA	NA
QAZ54347.1\|2018324_2019383_-	histidinol-phosphate transaminase	A0A1X6WGT4	Pacmanvirus	7.9e-22	26.7

DBSCAN-SWA_11

2031355 : 2039174

Pandoravirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAZ54357.1\|2031355_2032507_-	anthranilate synthase component I family protein	S4VNU7	Pandoravirus	1.2e-23	36.1
QAZ54358.1\|2032490_2033084_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.4e-36	42.4
QAZ54359.1\|2033434_2034103_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	1.1e-64	57.1
QAZ54360.1\|2034104_2034524_+	6-carboxytetrahydropterin synthase QueD	S4U060	uncultured_phage	6.3e-07	28.7
QAZ54361.1\|2034527_2035241_+	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	6.5e-52	43.5
QAZ54362.1\|2035339_2035924_+	hypothetical protein	NA	NA	NA	NA
QAZ54363.1\|2036203_2036644_+	hypothetical protein	NA	NA	NA	NA
QAZ54364.1\|2036984_2037458_+	DoxX family protein	NA	NA	NA	NA
QAZ54365.1\|2037432_2038119_+	DNA-binding response regulator	NA	NA	NA	NA
QAZ54366.1\|2038118_2039174_+	two-component sensor histidine kinase	A0A1V0SGX0	Hokovirus	1.6e-14	29.5

DBSCAN-SWA_12

2370856 : 2380400

Staphylococcus_phage(33.33%)

integrase

attL 2363601:2363620|attR 2377363:2377382

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2363601:2363620	attL	NA	NA	NA	NA
QAZ54666.1\|2370856_2371201_-	pathogenicity island protein	A0A1W6JQD5	Staphylococcus_phage	1.2e-40	64.3
QAZ54667.1\|2371871_2374244_-	DNA primase	A0A2H4JCU9	uncultured_Caudovirales_phage	3.7e-136	39.3
QAZ54668.1\|2374334_2374628_-	DUF1474 family protein	A0A1W6JQH0	Staphylococcus_phage	1.7e-14	46.1
QAZ54669.1\|2374628_2374853_-	hypothetical protein	A0A1W6JPA6	Staphylococcus_phage	7.5e-15	58.8
QAZ54670.1\|2375038_2375299_-	DNA-binding protein	NA	NA	NA	NA
QAZ54671.1\|2375295_2375535_-	XRE family transcriptional regulator	Q38329	Lactococcus_phage	2.5e-08	40.0
QAZ54672.1\|2375667_2376054_+	XRE family transcriptional regulator	U3PIS7	Lactobacillus_phage	3.8e-06	41.2
QAZ54673.1\|2376137_2377274_+\|integrase	site-specific integrase	A0A1S5S7K9	Streptococcus_phage	1.0e-75	42.5
QAZ54674.1\|2377367_2378909_-	GMP synthase (glutamine-hydrolyzing)	A0A1V0SH76	Hokovirus	1.2e-23	32.6
2377363:2377382	attR	NA	NA	NA	NA
QAZ54675.1\|2378933_2380400_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	5.2e-96	40.5

DBSCAN-SWA_13

2694333 : 2727457

Staphylococcus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAZ54956.1\|2694333_2694729_-	protein ArsC	A0A2H4PQT9	Staphylococcus_phage	8.5e-62	86.3
QAZ54957.1\|2694746_2696036_-	arsenical efflux pump membrane protein ArsB	A0A2H4PQU3	Staphylococcus_phage	1.7e-188	81.8
QAZ54958.1\|2696035_2696350_-	ArsR family transcriptional regulator	A0A2H4PQT4	Staphylococcus_phage	3.6e-39	73.1
QAZ54959.1\|2696410_2697010_-	recombinase family protein	E5FFF9	Burkholderia_phage	3.1e-15	30.8
QAZ54960.1\|2697516_2698191_-\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	1.7e-126	98.7
QAZ54961.1\|2698516_2699287_-	aminoglycoside O-nucleotidyltransferase ANT(4')-Ia	NA	NA	NA	NA
QAZ54962.1\|2699446_2700430_-	protein rep	A0A286QS97	Streptococcus_phage	6.1e-08	62.0
QAZ54963.1\|2700673_2701348_-\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	1.7e-126	98.7
QAZ55199.1\|2701542_2702445_+	hypothetical protein	NA	NA	NA	NA
QAZ54964.1\|2702460_2702904_+	AP2 domain-containing protein	A0A2H4J5K3	uncultured_Caudovirales_phage	1.5e-22	43.6
QAZ54965.1\|2702927_2703353_+	hypothetical protein	NA	NA	NA	NA
QAZ54966.1\|2703485_2704160_+\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	4.1e-125	97.3
QAZ54967.1\|2704298_2704523_-	XRE family transcriptional regulator	NA	NA	NA	NA
QAZ54968.1\|2705022_2706102_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	1.6e-38	33.5
QAZ55200.1\|2706125_2706242_+	hypothetical protein	NA	NA	NA	NA
QAZ54969.1\|2706550_2707354_-	lincosamide nucleotidyltransferase Lnu(B)	NA	NA	NA	NA
QAZ54970.1\|2707407_2708892_-	ABC-F type ribosomal protection protein Lsa(E)	A0A2H4UUX5	Bodo_saltans_virus	2.6e-26	26.0
QAZ54971.1\|2709980_2710439_+	hypothetical protein	NA	NA	NA	NA
QAZ55201.1\|2710489_2710741_-	hypothetical protein	NA	NA	NA	NA
QAZ54972.1\|2710958_2711768_-	ANT(9) family aminoglycoside nucleotidyltransferase Spw	NA	NA	NA	NA
QAZ54973.1\|2711899_2712427_-	adenine phosphoribosyltransferase	A0A1X9I6E2	Streptococcus_phage	1.9e-93	100.0
QAZ54974.1\|2712470_2713334_-	aminoglycoside nucleotidyltransferase ANT(6)-Ia	A0A1X9I6F2	Streptococcus_phage	8.7e-168	100.0
QAZ54975.1\|2713366_2714101_-	class I SAM-dependent methyltransferase	A0A1X9I6N4	Streptococcus_phage	1.5e-141	100.0
QAZ54976.1\|2714950_2715625_+\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	5.4e-125	97.8
QAZ55202.1\|2715810_2715873_+	tetracycline resistance leader peptide	NA	NA	NA	NA
QAZ54977.1\|2715906_2717283_+	tetracycline efflux MFS transporter Tet(L)	NA	NA	NA	NA
QAZ54978.1\|2717331_2717532_-	hypothetical protein	NA	NA	NA	NA
QAZ54979.1\|2717846_2719109_+	plasmid recombination protein	NA	NA	NA	NA
QAZ54980.1\|2719233_2719908_+\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	1.4e-125	98.2
QAZ54981.1\|2719939_2720203_-	hypothetical protein	NA	NA	NA	NA
QAZ54982.1\|2720669_2721842_+\|transposase	IS256 family transposase IS256	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
QAZ55203.1\|2721898_2722291_+	GNAT family N-acetyltransferase	A0A0N7GFH7	Staphylococcus_phage	6.9e-72	100.0
QAZ54983.1\|2722291_2723731_+	bifunctional aminoglycoside N-acetyltransferase AAC(6')-Ie/aminoglycoside O-phosphotransferase APH(2'')-Ia	A0A1X9I6C2	Streptococcus_phage	3.8e-285	100.0
QAZ54984.1\|2723860_2725033_-\|transposase	IS256 family transposase IS256	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
QAZ54985.1\|2725632_2726262_-	recombinase family protein	E5FFF9	Burkholderia_phage	3.1e-13	29.1
QAZ54986.1\|2726611_2727457_-	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	A0A1B0VBP7	Salmonella_phage	1.5e-31	34.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP030136

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection