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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP035566 Lactobacillus plantarum strain SRCM103300 chromosome, complete genome 0 crisprs csa3,cas3,DEDDh,DinG,WYL 0 0 8 0
CP035568 Lactobacillus plantarum strain SRCM103300 plasmid unnamed2 0 crisprs NA 0 0 1 0
CP035570 Lactobacillus plantarum strain SRCM103300 plasmid unnamed4 0 crisprs NA 0 0 0 0
CP035567 Lactobacillus plantarum strain SRCM103300 plasmid unnamed1 0 crisprs NA 0 0 1 0
CP035569 Lactobacillus plantarum strain SRCM103300 plasmid unnamed3 0 crisprs NA 0 0 0 0

Results visualization

1. CP035566
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 796570 : 805084 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_2 1000139 : 1050360 62 Lactobacillus_phage(52.94%) capsid,integrase,tail,terminase,holin,portal,head attL 1010947:1010967|attR 1051090:1051110
DBSCAN-SWA_3 1878004 : 1886697 10 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_4 1892402 : 1964744 58 Lactobacillus_phage(70.83%) transposase,tail,tRNA,holin NA
DBSCAN-SWA_5 1970004 : 2002745 44 Lactobacillus_phage(94.12%) capsid,integrase,protease,tail,terminase,portal,head attL 1966055:1966070|attR 2000470:2000485
DBSCAN-SWA_6 2153700 : 2160767 7 Escherichia_phage(50.0%) transposase,integrase attL 2144784:2144796|attR 2155779:2155791
DBSCAN-SWA_7 2755259 : 2808639 49 uncultured_Mediterranean_phage(28.57%) protease,tRNA,bacteriocin NA
DBSCAN-SWA_8 3124395 : 3135605 13 Bacillus_phage(25.0%) capsid,tail,terminase,portal,head NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP035568
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 5405 : 71365 59 unidentified_phage(16.67%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. CP035567
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 8678 : 68061 52 Staphylococcus_phage(21.05%) integrase,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage