CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP031738	Streptococcus pyogenes strain SP1336 chromosome, complete genome	3 crisprs	csm6,cas9,cas1,cas2,csn2,cas4,cas8c,cas5,cas3,DEDDh,csa3	2	11	8	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP031738_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031738_1

858786-858880

TypeII

II-A

Consensus_repeat	Method
GTTTTAGAGCTATGCTGTTTTGAATGGTC	CRISPRCasFinder

1 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of CP031738_1

>merge|CP031738|1|858786-858880|CRISPRCasFinder
GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAACAATAGAGCTAGACAAAAAATTGAGTTTGACGTTTTAGAGCTATGCTGTTTTGAATGGTC

>CP031738|1|1|858786-858880|CRISPRCasFinder
GTTTTAGAGCTATGCTGTTTTGAATGGTC	CCAAAACAATAGAGCTAGACAAAAAATTGAGTTTGAC
GTTTTAGAGCTATGCTGTTTTGAATGGTC

Protein	Signature genes	Signature genes Name	Protein_function
CP031738.1\|QBC34900.1\|864783_865803_+\|putative-sulfate-exporter-family-transporter	unknown	unknown	gnl\|CDD\|225411
CP031738.1\|QBC34899.1\|864216_864654_+\|peptide-methionine-(R)-S-oxide-reductase	unknown	unknown	gnl\|CDD\|234692
CP031738.1\|QBC34892.1\|857689_858031_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
CP031738.1\|QBC34887.1\|850124_850877_+\|acyl-[acyl-carrier-protein]-thioesterase	unknown	unknown	gnl\|CDD\|226401
CP031738.1\|QBC34890.1\|852717_856824_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
CP031738.1\|QBC34893.1\|858020_858683_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
CP031738.1\|QBC34901.1\|866009_866435_+\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|225446
CP031738.1\|QBC34894.1\|859260_859509_+\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
CP031738.1\|QBC34891.1\|856823_857693_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
CP031738.1\|QBC34889.1\|851640_852273_+\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
CP031738.1\|QBC34886.1\|848984_850115_+\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
CP031738.1\|QBC34884.1\|846801_848157_+\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|237670
CP031738.1\|QBC34895.1\|859554_860688_+\|ISAs1-family-transposase-IS1548	unknown	unknown	gnl\|CDD\|227720
CP031738.1\|QBC34888.1\|850876_851641_+\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
CP031738.1\|QBC35843.1\|859017_859197_+\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|239876
CP031738.1\|QBC34902.1\|866453_866945_+\|PTS-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|225976
CP031738.1\|QBC34885.1\|848280_848922_+\|hypothetical-protein	unknown	unknown	unknown
CP031738.1\|QBC34897.1\|860856_862689_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
CP031738.1\|QBC34896.1\|860692_860797_+\|exfoliative-toxin	unknown	unknown	unknown
CP031738.1\|QBC34898.1\|862876_864031_+\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|223003

Protein	Function_ID	Function_description	E-value
CP031738.1\|QBC34900.1\|864783_865803_+\|putative-sulfate-exporter-family-transporter	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	4.05613e-103
CP031738.1\|QBC34899.1\|864216_864654_+\|peptide-methionine-(R)-S-oxide-reductase	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	3.9427e-84
CP031738.1\|QBC34892.1\|857689_858031_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	4.79e-58
CP031738.1\|QBC34887.1\|850124_850877_+\|acyl-[acyl-carrier-protein]-thioesterase	gnl\|CDD\|226401	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism].	1.29903e-107
CP031738.1\|QBC34890.1\|852717_856824_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
CP031738.1\|QBC34893.1\|858020_858683_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	3.6851e-120
CP031738.1\|QBC34901.1\|866009_866435_+\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|225446	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism].	3.64459e-31
CP031738.1\|QBC34894.1\|859260_859509_+\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	3.26991e-11
CP031738.1\|QBC34891.1\|856823_857693_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.48912e-131
CP031738.1\|QBC34889.1\|851640_852273_+\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	1.04206e-87
CP031738.1\|QBC34886.1\|848984_850115_+\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
CP031738.1\|QBC34884.1\|846801_848157_+\|phosphoglucosamine-mutase	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
CP031738.1\|QBC34895.1\|859554_860688_+\|ISAs1-family-transposase-IS1548	gnl\|CDD\|227720	COG5433, COG5433, Transposase [DNA replication, recombination, and repair].	1.8759e-30
CP031738.1\|QBC34888.1\|850876_851641_+\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.13413e-127
CP031738.1\|QBC35843.1\|859017_859197_+\|nucleoside-diphosphate-kinase	gnl\|CDD\|239876	cd04413, NDPk_I, Nucleoside diphosphate kinase Group I (NDPk_I)-like: NDP kinase domains are present in a large family of structurally and functionally conserved proteins from bacteria to humans that generally catalyze the transfer of gamma-phosphates of a nucleoside triphosphate (NTP) donor onto a nucleoside diphosphate (NDP) acceptor through a phosphohistidine intermediate. The mammalian nm23/NDP kinase gene family can be divided into two distinct groups. The group I genes encode proteins that generally have highly homologous counterparts in other organisms and possess the classic enzymatic activity of a kinase. This group includes vertebrate NDP kinases A-D (Nm23- H1 to -H4), and its counterparts in bacteria, archea and other eukaryotes. NDP kinases exist in two different quaternary structures; all known eukaryotic enzymes are hexamers, while some bacterial enzymes are tetramers, as in Myxococcus. They possess the NDP kinase active site motif (NXXH[G/A]SD) and the nine residues that are most essential for catalysis.	1.77088e-05
CP031738.1\|QBC34902.1\|866453_866945_+\|PTS-transporter-subunit-IIB	gnl\|CDD\|225976	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism].	8.80769e-55
CP031738.1\|QBC34897.1\|860856_862689_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
CP031738.1\|QBC34898.1\|862876_864031_+\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|223003	PHA03169, PHA03169, hypothetical protein; Provisional.	5.19161e-11

>CP031738.1|QBC34893.1|858020_858683_+|type-II-A-CRISPR-associated-protein-Csn2
MNLNFSLLDEPIPLRGGTILVLEDVCVFSKIVQYCYKYEEDSELKFFDRKMKTIKESEIMLVTDILGFDVNSSTILKLIHADLESQFNEKPEVKSMIDKLVATITELIVFECLENELDLEYDEITILELIKSLGVKVETQSDTIFEKCLEILQIFKYLTKKKLLIFVNSGAFLTKDEVASLQEYISLTNLTVLFLEPRELYDFPQYILDEDYFLITKNMV
>CP031738.1|QBC34892.1|857689_858031_+|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTDTAEERKAYRKFRKFLLSEGFIMHQFSIYSKLLLNNTANNAMIGRLREHNPNKGNITLLTVTEKQFARMIYLHGERNNCIANSDERLVFLGEAFDES
>CP031738.1|QBC34891.1|856823_857693_+|type-II-CRISPR-associated-endonuclease-Cas1
MAGWRTVVVNTHSKLSYKNNHLIFKDAYKTELIHLSEIDILLLETTDIVLSTMLVKRLVDENVLVIFCDDKRLPTAMLMPFYGRHDSSLQLGKQMSWSETVKSQVWTTIIAQKILNQSCYLGACSYFEKSQSIMDLYHGLENFDPSNREGHAARIYFNTLFGNDFSRDLEHPINAGLDYGYTLLLSMFAREVVVSGCMTQFGLKHANQFNQFNFASDIMEPFRPLVDKIVYENRNQPFPKIKRELFTLFSDTFSYNGKEMYLTNIISDYTKKVVKALNNEGKGVPEFRI
>CP031738.1|QBC34890.1|852717_856824_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MDKKYSIGLDIGTNSVGWAVITDDYKVPSKKFKVLGNTDRHSIKKNLIGALLFDSGEIAEATRLKRTARRRYTRRKNRICYLQEIFSNEMAKVDDSFFHRLEESFLVEEDKKHERHPIFGNIVDEVAYHEKYPTIYHLRKKLVDSTDKADLRLIYLALAHMIKFRGHFLIEGDLNPDNSDVDKLFIQLVQTYNQLFEENPINASGVDAKAILSARLSKSRRLENLIAQLPGEKKNGLFGNLIALSLGLTPNFKSNFDLAEDAKLQLSKDTYDDDLDNLLAQIGDQYADLFLAAKNLSDAILLSDILRLNSEITKAPLSASMIKRYDEHHQDLTLLKALVRQQLPEKYKEIFFDQSKNGYAGYIDGGASQEEFYKFIKPILEKMDGTEELLAKLNREDLLRKQRTFDNGSIPHQIHLGELHAILRRQEDFYPFLKDNREKIEKILTFRIPYYVGPLARGNSRFAWMTRKSEETITPWNFEEVVDKGASAQSFIERMTNFDKNLPNEKVLPKHSLLYEYFTVYNELTKVKYVTEGMRKPAFLSGEQKKAIVDLLFKTNRKVTVKQLKEDYFKKIECFDSVEISGVEDRFNASLGTYHDLLKIIKDKDFLDNEENEDILEDIVLTLTLFEDREMIEERLKTYAHLFDDKVMKQLKRRRYTGWGRLSRKLINGIRDKQSGKTILDFLKSDGFANRNFMQLIHDDSLTFKEDIQKAQVSGQGDSLHEHIANLAGSPAIKKGILQTVKVVDELVKVMGRHKPENIVIEMARENQTTQKGQKNSRERMKRIEEGIKELGSQILKEHPVENTQLQNEKLYLYYLQNGRDMYVDQELDINRLSDYDVDHIVPQSFIKDDSIDNKVLTRSDKNRGKSDNVPSEEVVKKMKNYWRQLLNAKLITQRKFDNLTKAERGGLSELDKAGFIKRQLVETRQITKHVAQILDSRMNTKYDENDKLIREVKVITLKSKLVSDFRKDFQFYKVREINNYHHAHDAYLNAVVGTALIKKYPKLESEFVYGDYKVYDVRKMLAKSEQEIGKATAKYFFYSNIMNFFKTEITLANGEIRKRPLIETNGETGEIVWDKGRDFATVRKVLSMPQVNIVKKTEVQTGGFSKESILPKRNSDKLIARKKDWDPKKYGGFDSPTVAYSVLVVAKVEKGKSKKLKSVKELLGITIMERSSFEKNPIDFLEAKGYKEVRKDLIIKLPKYSLFELENGRKRMLASAGELQKGNELALPSKYVNFLYLASHYEKLKGSPEDNEQKQLFVEQHKHYLDEIIEQISEFSKRVILADANLDKVLSAYNKHRDKPIREQAENIIHLFTLTNLGAPTAFKYFDTTIDRKRYTSTKEVLDATFIHQSITGLYETRIDLSQLGGD
>CP031738.1|QBC34889.1|851640_852273_+|TIGR01906-family-membrane-protein
MVENTKLLCSWVWLLALAILITIYSTWLWYPLEVDHLKLEQVVFMSKDAILHNYNGLLNYLTNPFVTRLEFANFHSSADGLKHFADVKWLFHLTQVVFLGLLYPTLKTFTQRLKTKRFWLLQKPLILAALFPLMIGLMASFIGFEHFFTLFHQVLFVGDSSWLFDPLKDPVIWILPEVFFLHCFLFFMIVYEIILWSLVGLARWQRLNVE
>CP031738.1|QBC34888.1|850876_851641_+|TIGR01457-family-HAD-type-hydrolase
MPYKGYLIDLDGTIYQGKNRIPAGERFIKRLQEKGIPYLLVTNNTTRTPEMVQSMLAKQFNVETGIETIYTATMATVDYMNDMNRGKTAYVIGETGLKSAIAAAGYIEELENPAYVVVGLDSQVTYEMLAIATLAIQKGALFIGTNPDLNIPTERGLMPGAGALNALLEAATRVKPVFIGKPNAIIMNKSLEVLGIQRSEAVMVGDNYLTDIMAGIQNDIATILVTTGFTRPEEVPTLPIQPDHVLSSLDEWRL
>CP031738.1|QBC34887.1|850124_850877_+|acyl-[acyl-carrier-protein]-thioesterase
MGLSYQEELTLPFELCDVKSDIKLPLLLDYCLMVSGRQSAQLGRSNNNLLADYKLVWIVTDYEITIHRLPHFQETITIETKALSYNKFFCYRQFYIYDQEGGLLVDILAYFALLNPDTRKVATIPEDLVAPFKTDFVKKLHRVPKMPLLEQSIDRDYYVRYFDIDMNGHVNNSKYLDWMYDVLGCAFLKTHQPLKMTLKYVKEVSPGGQITSSYHLDQLTSYHQIISDGQLNAQAMIEWRAIKQTESEID
>CP031738.1|QBC34886.1|848984_850115_+|oxygen-independent-coproporphyrinogen-III-oxidase
MSKKPTSAYVHIPFCTQICYYCDFSKVFIQNQPVDAYLKALIQEFESYDIHDLKTLYIGGGTPTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRISLGVQTFNNKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLEQVKENVAKALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPIQHYLKAVEAGNARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGISFEERYGNIVRELQNQGLLVKDDAFVRMTKKGLFLGDSVAERFILD
>CP031738.1|QBC34885.1|848280_848922_+|hypothetical-protein
MTKQQIEKLADLLPPFAATLYLDMIPEFQEGYASYVYQTQKEDIQKRRIKQLTKNFERLLDTPSFYVMPVTRKTAEQLLADKGLAYHLLSTVAANQVFAAAVNEDQTLFQVLRNGARVAFVILQEKGEFLEMTLGILETVTENEVPAAIVEAVQTYLLTDMQEKLPSLSIMVSQESSKLFYQEQGFVLLAKGCKPGNENDSDVCQLVKYFSKP
>CP031738.1|QBC34884.1|846801_848157_+|phosphoglucosamine-mutase
MGKYFGTDGVRGEANVELTPELAFKLGRFGGYVLSQHETERPKVFVARDTRISGEMLESALIAGLLSVGIEVYKLGVLATPGVSYLVRTEKASAGVMISASHNPALDNGIKFFGNDGFKLADDQELEIEALLDAPEDTLPRPSAEGLGTLVDYPEGLRKYEKFLVTTGTDLSGMTVALDTANGAASVSARDVFLDLNAEIAVIGEKPNGLNINDGVGSTHPEQLQELVKETGADLGLAFDGDSDRLIAVDETGEIVDGDRIIFIIGKYLSEKGLLAHNTIVTTVMSNLGFHKALDKQGINKAITAVGDRYVVEEMRSSGYNLGGEQSGHVIIMDYNTTGDGQLTAIQLAKVMKETGKSLSELAAEVTIYPQKLVNIRVENSMKDRAMEVPAIANIIAKMEDEMAGNGRILVRPSGTEPLLRVMAEAPTDAEVDYYVDTIADVVRTEIGCDN
>CP031738.1|QBC35843.1|859017_859197_+|nucleoside-diphosphate-kinase
MIKPDGVKQGEVVGEVLRWIERLRFTFKRFELRQASSKYLAKHDEALVINLLILNLKLT
>CP031738.1|QBC34894.1|859260_859509_+|nucleoside-diphosphate-kinase
MMRVTNPTDALCGTIRGNFAQALSDDWEIFSMVHGSHLSDSARREIVLWSHQSNLGSSAILLQDNPSRQTHEETFVFRKLDS
>CP031738.1|QBC34895.1|859554_860688_+|ISAs1-family-transposase-IS1548
MIDFIISIDDCAVELDSRQSWKIRYPLSTILFLVFVCQLAGIETWKEMEDFIEMNEPLFATYVDLSEGCPSHDTLERVISLVNSDRLKELKVQFEQSLTSLDAVHQLISVDGKTIRGNRGKNQKPVHIVTAYDGGHHLSLGQVAVEEKSNEIVAIPQLLRTIDIRKSIVTIDAMGTQTAIVDTIIKGKADYCLAVKGNQETLYDDIALYFSDVNLLEELQENAQYYQTVEKSRGQIEVREYWVSSDIKWLCQNHPKWHKLRGIGMTRNTIDKDGQLSQENRYFIFSFKPDVLTFANCVRGHWQIESMHWLLDVVYHEDHHQTLDKRAAFNLNLIRKMCLYFLKVMVFPKKDLSYRRKQRYISVHLEDYLVQLFGERG
>CP031738.1|QBC34896.1|860692_860797_+|exfoliative-toxin
MIDLKRNLFKIDVRAQKDEEKVFMRTAWIIRKKR
>CP031738.1|QBC34897.1|860856_862689_+|elongation-factor-4
MNSQDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRHEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGDVDAPLQALIFDSVYDAYRGVILQVRIVNGIVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYVAASIKTVADTRVGDTVTLANNPAKEALHGYKQMNPMVFAGIYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVHTTDEDMIEVSNPSEFPDPTRVAFIEEPYVKAQIMVPQEFVGAVMELSQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYDMSEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKIIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDAKK
>CP031738.1|QBC34898.1|862876_864031_+|LPXTG-cell-wall-anchor-domain-containing-protein
MNKTKQNKTKHSLLCRYGLTSAAALLLAFGGASAVKADQQPTIEETQSQLQDLREAFPKLEDSYQEWDIFRQNKIYKHLDEFEHKLNSYLKVLDGSLSQLKGEKGERGPVGPAGPQGLQGTKGDRGETGEQGQRGETGPAGPQGPAGPVGPAGKDGEAGAQGPVGPAGKDGQDGKDGLPGKDGQNGKDGLPGKDGKDGQDGKDGLPGKDGKDGLPGKDGKDGQNGKDGQNGKDGLPGKDGQNGKDGLPGKDGKDGQDGKDGLPGKDGKDGLPGKDGKDGQPGKPAPKTPEVPQKPDTAPHTPKTPQIPGQSKDVTPAPQSPSNRGLNKPQTQSGNQLAKTPAAHDTHRQLPATGETTNPFFTAAAVAIMTTAGVVAVAKRQENN
>CP031738.1|QBC34899.1|864216_864654_+|peptide-methionine-(R)-S-oxide-reductase
METSDELKQRIGDLSYEVTQHAATESPFTGEYDDFFEKGIYVDIVSGEVLFSSLDKFNSGCGWPAFSKPIENRMVTNHDDSSYGMRRVEVKSREAGSHLGHVFSDGPKEAGGLRYCINSAALKFIPYDQMEKEGYAQWLTLFDET
>CP031738.1|QBC34900.1|864783_865803_+|putative-sulfate-exporter-family-transporter
MSTHLRKLPGLLLCLLLALPAWCLGRLFPIIGAPVFAILLGMLLALFYEHRDKTKEGISFTSKYILQTAVVLLGFGLNLTQVMAVGMQSLPIIISTIATALLVAYGSQKWLRIDVNTATLVGVGSSICGGSAIAATAPVIKAKDDEVAKAISVIFLFNMLAALLFPSLGQLLGLSNEGFAIFAGTAVNDTSSVTATATAWDALHHSNTLDGATIVKLTRTLAILPITLGLSLYRAKKEHDIVTEEGFSLRKSFPRFILFFLLASLITTLMTSLGVSADVFHSLKTLSKFFIVMAMAAIGLNTNLVKLIKTGGQAILLGAICWVAITLVSLAMQLSLGIW
>CP031738.1|QBC34901.1|866009_866435_+|PTS-sugar-transporter-subunit-IIA
MKRKFLIGSHGRLASGLQSSIDILAGMGQALETIDAYVDDSDYTSQIDDFIAGVAADEQGLIFTDLLGGSVNQKMVTAVMNSGKDNIFLITNSNLATLLSLVFLKPGEALTKDEIVTVINESQVQLVDLVPETNSEDDFFD
>CP031738.1|QBC34902.1|866453_866945_+|PTS-transporter-subunit-IIB
MITQIRVDDRLIHGQVAVVWTKELNAPLLVVANDEAAKNEITQMTLKMAVPNGMKLLIRSVEDSIKLFNDPRATDKRIFVIVNSVKDACAIAKEVPDLEAVNVANVGRFDKSDPASKVKVTPSLLLNPEEMAAAKELVSLPELDVFNQVLPSNTKVHLSQLVN

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Crispr_ID: CP031738_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031738_2

1045690-1045791

Orphan

Consensus_repeat	Method
AATAATTGGTATAGTCTAATTATA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031738_2

>merge|CP031738|2|1045690-1045791|CRISPRCasFinder
AATAATTGGTATAGTCTAATTATACCGATAAAAACATTATGTTTACAGTATATAATATCCACAATGTCTTGTCAAACATAAAATTGGTATAGTCTAATTATA

>CP031738|2|2|1045690-1045791|CRISPRCasFinder
AATAATTGGTATAGTCTAATTATA	CCGATAAAAACATTATGTTTACAGTATATAATATCCACAATGTCTTGTCAAACA
TAAAATTGGTATAGTCTAATTATA

Protein	Signature genes	Signature genes Name	Protein_function
CP031738.1\|QBC35064.1\|1041068_1041905_-\|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270217
CP031738.1\|QBC35062.1\|1038320_1039556_+\|cation-diffusion-facilitator-family-transporter	unknown	unknown	gnl\|CDD\|223131
CP031738.1\|QBC35076.1\|1054539_1055154_-\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
CP031738.1\|QBC35060.1\|1034031_1036350_-\|DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429
CP031738.1\|QBC35074.1\|1052913_1053612_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
CP031738.1\|QBC35068.1\|1043824_1045639_-\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
CP031738.1\|QBC35072.1\|1049247_1052358_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|180917
CP031738.1\|QBC35070.1\|1046589_1048092_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235619
CP031738.1\|QBC35069.1\|1045814_1046372_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
CP031738.1\|QBC35066.1\|1042559_1043201_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
CP031738.1\|QBC35067.1\|1043307_1043643_-\|alkylphosphonate-utilization-protein	unknown	unknown	gnl\|CDD\|225380
CP031738.1\|QBC35078.1\|1056771_1059036_-\|glycogen/starch/alpha-glucan-family-phosphorylase	unknown	unknown	gnl\|CDD\|340853
CP031738.1\|QBC35075.1\|1053621_1054407_+\|ABC-transporter-permease	unknown	unknown	unknown
CP031738.1\|QBC35061.1\|1036878_1038201_+\|sodium:alanine-symporter-family-protein	unknown	unknown	gnl\|CDD\|224040
CP031738.1\|QBC35059.1\|1033419_1033668_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
CP031738.1\|QBC35063.1\|1039925_1040699_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369335
CP031738.1\|QBC35065.1\|1041920_1042550_-\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
CP031738.1\|QBC35071.1\|1048154_1049168_-\|ATP-dependent-6-phosphofructokinase	unknown	unknown	gnl\|CDD\|235111
CP031738.1\|QBC35077.1\|1055894_1056515_+\|DUF3862-domain-containing-protein	unknown	unknown	gnl\|CDD\|289729
CP031738.1\|QBC35073.1\|1052542_1052914_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639

Protein	Function_ID	Function_description	E-value
CP031738.1\|QBC35064.1\|1041068_1041905_-\|amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270217	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily. This subfamily includes periplasmic binding domain of ATP-binding cassette transporter-like systems that serve as initial receptors in the ABC transport of amino acids and their derivatives in eubacteria. After binding their ligand with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The Abp proteins belong to the PBPI superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.04078e-109
CP031738.1\|QBC35062.1\|1038320_1039556_+\|cation-diffusion-facilitator-family-transporter	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	3.15139e-96
CP031738.1\|QBC35076.1\|1054539_1055154_-\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	1.14841e-31
CP031738.1\|QBC35060.1\|1034031_1036350_-\|DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
CP031738.1\|QBC35074.1\|1052913_1053612_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.0668e-63
CP031738.1\|QBC35068.1\|1043824_1045639_-\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
CP031738.1\|QBC35072.1\|1049247_1052358_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|180917	PRK07279, dnaE, DNA polymerase III DnaE; Reviewed.	0
CP031738.1\|QBC35070.1\|1046589_1048092_-\|pyruvate-kinase	gnl\|CDD\|235619	PRK05826, PRK05826, pyruvate kinase; Provisional.	0
CP031738.1\|QBC35069.1\|1045814_1046372_-\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	2.3728e-38
CP031738.1\|QBC35066.1\|1042559_1043201_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	7.10383e-72
CP031738.1\|QBC35067.1\|1043307_1043643_-\|alkylphosphonate-utilization-protein	gnl\|CDD\|225380	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism].	2.02984e-64
CP031738.1\|QBC35078.1\|1056771_1059036_-\|glycogen/starch/alpha-glucan-family-phosphorylase	gnl\|CDD\|340853	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins. This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	0
CP031738.1\|QBC35061.1\|1036878_1038201_+\|sodium:alanine-symporter-family-protein	gnl\|CDD\|224040	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism].	0
CP031738.1\|QBC35059.1\|1033419_1033668_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	1.43969e-13
CP031738.1\|QBC35063.1\|1039925_1040699_-\|hypothetical-protein	gnl\|CDD\|369335	pfam07373, CAMP_factor, CAMP factor (Cfa). This family consists of several bacterial CAMP factor (Cfa) proteins which seem to be specific to Streptococcus species. The CAMP reaction is a synergistic lysis of erythrocytes by the interaction of an extracellular protein (CAMP factor) produced by some streptococcal species with the Staphylococcus aureus sphingomyelinase C (beta-toxin).	2.28878e-97
CP031738.1\|QBC35065.1\|1041920_1042550_-\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	2.62206e-110
CP031738.1\|QBC35071.1\|1048154_1049168_-\|ATP-dependent-6-phosphofructokinase	gnl\|CDD\|235111	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase.	0
CP031738.1\|QBC35077.1\|1055894_1056515_+\|DUF3862-domain-containing-protein	gnl\|CDD\|289729	pfam12978, DUF3862, Domain of Unknown Function with PDB structure (DUF3862). Structure 3D4E shared structural similarity to beta-lactamase inhibitory proteins (BLIP) which already include 1XXM, 1S0W, 1JTG, 2G2U, 2G2W, 2B5R, and 3due. All of structures are involved in beta-lactamase inhibitor complex. (REF http://www.topsan.org/Proteins/JCSG/3d4e).	1.56424e-86
CP031738.1\|QBC35073.1\|1052542_1052914_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	4.0536e-49

>CP031738.1|QBC35068.1|1043824_1045639_-|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGVVGNRNATDILMQGLEKLEYRGYDSAGIFVANAHQTNLIKSVGRIADLRAKIGIDVAGSTGIGHTRWATHGQSTEDNAHPHTSQTGRFVLVHNGVIENYLHIKSEFLAGHDFKGQTDTEIAVHLIGKFVEEDKLSVLEAFKKALSIIEGSYAFALMDSQATDTIYVAKNKSPLLIGLGEGYNMVCSDAMAMIRETSEFMEIHDKELVILTKDKVIVTDYDGKELIRDSYTAELDLSDIGKGTYPFYMLKEIDEQPTVMRQLISTYADETGNVQVDPAIITSIQEADRLYILAAGTSYHAGFATKNMLEQLTDTPVELGVASEWGYHMPLLSKKPMFILLSQSGETADSRQVLVKANAMGIPSLTVTNVPGSTLSREATYTMLIHAGPEIAVASTKAYTAQIAALAFLAKAVGEANGKQEALDFNLVHELSLVAQSIEATLSEKDLVAEKVQALLATTRNAFYIGRGNDYYVAMEAALKLKEISYIQCEGFAAGELKHGTISLIEEDTPVIALISSSQLVSSHTRGNIQEVAARGAHVLTVVEEGLDREGDDIIVNKVHSFLAPIAMVIPTQLIAYYASLQRGLDVDKPRNLAKAVTVE
>CP031738.1|QBC35067.1|1043307_1043643_-|alkylphosphonate-utilization-protein
MSLPNCLQCQSEYVYEDGLLLICPMCAFEWTPGEEATEEEGLVVLDSNGVRLSDGDTITVVKDLKVKGAPKDLKQGTRVKNIRLVEGDHNIDCKIDGFGAMKLKSEFVKKI
>CP031738.1|QBC35066.1|1042559_1043201_-|amino-acid-ABC-transporter-permease
MTYIQQVLPSLLDGALVTLQVFFIVIILSIPLGTILAFLMKIPFKPLQWFLTLYVWMMRGTPLLLQLIFFYYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKTAANRDATLAPMFIAGLIYLLLIGLVTIISKQVEKRFNYYQ
>CP031738.1|QBC35065.1|1041920_1042550_-|amino-acid-ABC-transporter-ATP-binding-protein
MLELKNISKQFGQKTIFDGFNLTVQDGEVLSLVGPSGGGKTTLLRMLAGLESIDSGQVFYNGEDVGIDHLENRNLLGFVFQDFQLFPHLTVLDNLTLSPTITMGKQKADAKEKALDLLARLGLKEHAQVYPYSLSGGQKQRVALARAMMIAPQIIGYDEPTSALDPELRQTVEALIVQNREMGITQIVVTHDLVFAEAISDRIIRVNPK
>CP031738.1|QBC35064.1|1041068_1041905_-|amino-acid-ABC-transporter-substrate-binding-protein
MIIKKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKCKGFDIDLAKEVFHQYGLKVNFQAINWDMKEAELNNGKIDVIWNGYSITKERQDKVAFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDANQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKEDKTLQAKINRAFRVLYQNGKFQAISEKWFGDDVATANIKS
>CP031738.1|QBC35063.1|1039925_1040699_-|hypothetical-protein
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDTILMNNNQANLQRDALVQKLDEGHQQLEAIKHEAKGTDIEATVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQDALETALKS
>CP031738.1|QBC35062.1|1038320_1039556_+|cation-diffusion-facilitator-family-transporter
MTQDPIANLKLARKGPIVSIIVYLLLSVAKLLAGYLLNASSLIADGFNNLSDIVGNVALLIGLHLASQPADANHKFGHWKIEDLSSLVTSFIMFLVGFQVLIHTIKSIFSGQQVDIDPLGAIVGIVSAFVMLGVYVFNKRLSKRVKSSALVAASKDNLADAVTSIGTSIAIIAASLHLPVIDHIAAMIITFFILKTAFDIFMESSFSLSDGFDSRHLKKYEKAILEIPKIVSVKSQRARTYGSNVYLDIVLEMNPDLSVYESHSITEKVEQLLSDQFSIYDIDIHVEPAMIPEEEIFDNVAKKLYRYEKLILSKVPDYDHYIAKSFQLIDANGQTVNYEQFLNQEIYYPSNFNHFQIESISQKTMLVTYQLNGNQRTSIWRCHESWSLLFHQITPIAKKQLHHTHYRIVKM
>CP031738.1|QBC35061.1|1036878_1038201_+|sodium:alanine-symporter-family-protein
MIALVKLIDNLVWGPPLLILLVGTGIYLTSRLGLIQILKLPRAFKLIFSDDEGHGDISSFAALATALAATVGTGNIVGVATAIKSGGPGALFWMWVAAFLGMATKYAEGVLAIKYRTKDANGHISGGPMYYIVNGMGTKWKPLAILFAGSGILVALFGIGTFAQVNSITSSLGHSFGLSPQMVSIVLAIFVAAIIFGGIHSISKVAEKVVPFMAIFYILSSLAVIFSHYQQLLPVIRLVFQSAFTPTAAIGGFAGSLMKDAIQKGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLISMTGTFIDTIIICTLTGLSILVTGQWTGQLEGAPLTQSAFATVFGNLGTFGLTFSLVLFAFTTILGWSYYGERCFEFLFGITHLTYFRIVFILMVGLGGFLKLELIWVLADIVNGLMALPNLIALLALSPVVILETKHYFIK
>CP031738.1|QBC35060.1|1034031_1036350_-|DNA-helicase-PcrA
MNPLLNGMNDRQAQAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKFVNPWNILAITFTNKAAREMKERALALNPATKDTLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLMKRILKQLNIDPKKWNERSILGTISNAKNDLLDEKGYEAQAADMYSQIVARCYKAYQEELRRSEALDFDDLIMMTLRLFDANPDVLAYYQQRYQYIHVDEYQDTNHAQYQLIKLLASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPDAKVVLLEENYRSTKKILQAANDVINNNRNRRPKKLWTQNADGEQLVYYRANDERDEAVFVASTISNMSQELGKNFKDFAVLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDLIAYLTIVANPADNISFERIVNEPKRGVGPGTLDKLRQFAYESDQSLLEAASNLLMSPLKGKAAQAIMDLANILGQLRQDLDQMSITDLAEALLEKTGYLDSLRLQNTLESQARIENIEEFLSVTKNFDESSASQEEDETGVDRLGRFLNDLALIADTDDSQAEAAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEDPDELEEERRLAYVGITRAEEVLFMTNANTRTLFGKSSYNRPTRFLKEISEELLSYKGLARPAQSSFGVRFSTETHTQFGQGMSLSEALQARKAQAQVRQSAQPMQAHTIPSASTSSVLPFGSNSSVEEVTWQIGDIAHHKKWGDGTVLEVSGSGKTMELKIKFPEVGLKKLLASVAPIEKK
>CP031738.1|QBC35059.1|1033419_1033668_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MGLIWTLIVGALIGVIAGALTKKGGSMGWIANIAAGLVGSSVGQALLGSWGPSLAGMSLIPSVIGAVIVVMITSFVLNKTNN
>CP031738.1|QBC35069.1|1045814_1046372_-|signal-peptidase-I
MVKRDFIRNILLLLIVIIGAILLRIFVFSTFKVSPETANTYLKSGDLVTIKKNIQPKYKDFVVYRVGKKDYVSRVIAVEGDSVTYMDDIFYLNNMVESQAYLEKMKAHYLNHAPFGTLYTDDFTVATITADKYQKVPKGKYLLLNDNRKNTNDSRRFGLINASQIKGLVTFRVLPLSDFGFVEVE
>CP031738.1|QBC35070.1|1046589_1048092_-|pyruvate-kinase
MNKRVKIVATLGPAVEIRGGKKYGEDGYWAGQLDVEESAKKIAELIEAGANVFRFNFSHGDHKEQGDRMATVRLAEEIARQKVGFLLDTKGPEMRTELFADDAKEFSYVTGEKIRVATTQGIQSTRDVIALNVAGSLDIYDEVEVGHTILIDDGKLGLKVIDKDIATRQFIVEVENDGIIAKQKGVNIPNTKIPFPALAERDNADIRFGLEQGLNFIAISFVRTAKDVEEVREICRETGNDHVQLFAKIENQQGIDNLDEIIEAADGIMIARGDMGIEVPFEMVPVFQKMIITKVNAAGKAVITATNMLETMTEKPRATRSEVSDVFNAVIDGTDATMLSGESANGKYPVESVRTMATIDRNAQTLLNEYGRLDSSAFPRTNKTDVIASAVKDATHSMDIKLVVTITETGNTARAISKFRPDADILAVTFDEKVQRALMINWGVIPVLAEKPASTDDMFEVAERVAVEAGLVQSGDNIVIVAGVPVGTGGTNTMRVRTVK
>CP031738.1|QBC35071.1|1048154_1049168_-|ATP-dependent-6-phosphofructokinase
MKRIAVLTSGGDAPGMNAAIRAVVRKAISEGMEVYGINRGYAGMVDGDIFPLGSKEVGDKISRGGTFLYSARYPEFAQLEGQLAGIEQLKKHGIEGVVVIGGDGSYHGAMRLTEHGFPAVGIPGTIDNDIAGTDYTIGFDTAVNTAVEAIDKLRDTSSSHGRTFVVEVMGRNAGDIALWAGIASGADQIIVPEEEFDIEKVASTIQYDFEHKGKNHHIIVLAEGVMSGEAFAQKLKEAGDKSDLRVTNLGHILRGGSPTARDRVIASWMGSHAVELLKEGKGGLAVGIHNEELVESPILGTAEEGALFSLTEEGKIIVNNPHKARLDFAALNRSLSQ
>CP031738.1|QBC35072.1|1049247_1052358_-|DNA-polymerase-III-subunit-alpha
MFAQLDTKTVYSFMDSLIDLNHYFERAKQFGYHTIGIMDKDNLYGAYHFIKGCQKNGLQPVLGLEVEILYQERQVLLNLIAQNTQGYHQLLKISTAKMSGKLHMDYLCQHLEGIAVIIPSKGWSDTLVVPFDYYIGVDQYTDLSHMDSKRQLIPLRTVRYFAQDDMETLHMLHAIRDNLSLAETPVVESDQELADCQQLTAFYQTHCPQALQNLEDLVSGIYYDFDTNLKLPHFNRDKSAKQELQDLTEAGLKEKGLWKEPYQSRLLHELVIISDMGFDDYFLIVWDLLRFGRSKGYYMGMGRGSAAGSLVAYALNITGIDPVQHDLLFERFLNKERYSMPDIDIDLPDIYRSEFLRYVRNRYGSDHSAQIVTFSTFGPKQAIRDVFKRFGVPEYELTNLTKKIGFKDSLATVYEKSISFRQVINSRTEFQKAFAIAKRIEGNPRQTSIHAAGIVMSDDTLTNHIPLKSGDDMMITQYDAHAVEANGLLKMDFLGLRNLTFVQKMQEKVAKDYGCQIDIAAIDLEDPQTLALFAKGDTKGIFQFEQNGAINLLKRIKPQRFEEIVATTSLNRPGASDYTTNFIKRREGQEKIDLIDPVIASILEPTYGIMLYQEQVMQIAQVYAGFTLGKADLLRRAMSKKNLQEMQKMEEDFIASAKHLGRAEETARGLFKRMEKFAGYGFNRSHAFAYSALAFQLAYFKAHYPAVFYDIMMNYSSSDYITDALESDFQVAQVTINSIPYTDKIEASKIYMGLKNIKGLPRDFAYWIIEQRPFNSVEDFLTRTPEKYQKKVFLEPLIKIGLFDCFEPNRKKILDNLDGLLVFVNELGSLFSDSSFSWVDTKDYSATEKYSLEQEIVGVGMSKHPLIDIAEKSTQTFTPISQLVKESEAVVLIQIDSIRIIRTKTSGQQMAFLSVNDTKKKLDVTLFPQEYAIYKDQLKEGEFYYLKGRIKERDHRLQMVCQQVQMAISQKYWLLVENHQFDSQISEILGAFPGTTPVVIHYQKNKETIALTKIQVHVTENLKEKLRPFVLKTVFR
>CP031738.1|QBC35073.1|1052542_1052914_+|GntR-family-transcriptional-regulator
MSWKFDEKSPIYAQIAQHVMMQIISQEIKSGDQLPTVREYAEIAGVNPNTMQRAFTELEREGMVYSQRTAGRFVTDDQKLIARKRRELAISELESFITNMTKMGFSHTEIIPVLTSFLKEDSQ
>CP031738.1|QBC35074.1|1052913_1053612_+|ABC-transporter-ATP-binding-protein
MAHLLQLHHVSKSYREKKAIDDLTITIPNGKIIGLLGPNGSGKTTLIKLINGLLQPNKGEIVIDGYRPCVETKKIISYLPDTTYLNENMRIKDILEFFSDFYSDFDKSKATSLLRDLELDPEDRFKTLSKGNKEKVQLILVMSRKARLYVLDEPIGGVDPAARDYILKTIINSYCENASVIISTHLISDIEPILDEVIFLKQGRLFLSGNADDLRQEYQQSIDSLFRETYKV
>CP031738.1|QBC35075.1|1053621_1054407_+|ABC-transporter-permease
MFGKLLKYEFRSIGKWYFALNAFVIAIAAILSFTIKLFAQSNSDGLFGVLTNKMLPLTLGLTFGSLIAGSLLSTLLIIIKRFSKSVFGREGYLTLTLPVNSHQIILSKLLASFICSVFNTIILAFAIAIVIVPMFNINELLEGFFNSFKVDYFINMLTVLAYVLLSTFTSILLIYLSISIGQLFSNRRGLMAFIAYFILVILISVAATYVHSHIFNINTSAGSFPFTEQKTIYLLILEQFIEMIMFYLATNFIIKNKLNLQ
>CP031738.1|QBC35076.1|1054539_1055154_-|TVP38/TMEM64-family-protein
MTKRNSKAYILWQKIIKILGIIALIGTFFLAFWLYRLGILNDSNALKDLVQRYRLWGPFVFIVVQIIQIVFPVIPGGLTTVAGFLIFGPVTGFIYNYVGIIIGSIVLFLLVKTYGRKFILLFVNDKTFYKYERRLETPGYEKLFIFCMASPVSPADIMVMITGLTDMSLKRFVTILLITKPISIIGYSYLFIFGKDVISWFLQH
>CP031738.1|QBC35077.1|1055894_1056515_+|DUF3862-domain-containing-protein
MTKKHLLTLLLISFFTSFLVACSTTKDKEPQPSDSEIITPRLHQDAHQDKRANFEKIKLATVDSSFTGGTSLEELISLFGEPSQHDPKTAGEVTIDAYTWQFDQVTLTVNLYQNSSIVKTISNFTFARELGLSQKEYQQLQKGMSYEDVKKILTEPDNYSQASSSDHQTLQAIWVSGLKTDTSGANISLVFENNQLTEMSQVGLEE
>CP031738.1|QBC35078.1|1056771_1059036_-|glycogen/starch/alpha-glucan-family-phosphorylase
MTRFTEYVETKLGKSLTQASNEEIYLSLLNFVKEEASHKAKNSAKRKVYYISAEFLIGKLLSNNLINLGIYKDIKEELAAAGKSIAEVEDVELEPSLGNGGLGRLASCFIDSISSLGINGEGVGLNYHCGLFKQVFKHNEQEAEPNYWIEDDSWLVPTDISYDVPFKNFTLKSRLDRIDVLGYKRDTKNYLNLFDIEGVDYGLIKDGISFDKTQIAKNLTLFLYPDDSDKNGELLRIYQQYFMVSNAVQLIIDEAIERGSNLHDLADYAYVQINDTHPSMVIPELIRLLTEKHGFDFDEAVAVVKNMVGYTNHTILAEALEKWPTAYLNEVVPHLVTIIEKLDALVRSEVSDPAVQIIDESGRVHMAHMDIHFATSVNGVAALHTEILKNSELKAFYDLYPEKFNNKTNGITFRRWLEFANQDLADYIKELIGDEYLTDATKLEKLMAFADDKAVHVKLAEIKFNNKLALKRYLKDNKDIELDEHSIIDTQIKRFHEYKRQQMNALYVIHKYLEIKKGNLPKRKITVIFGGKAAPAYIIAQDIIHLILCLSELINNDPEVSPYLNVHLVENYNVTVAEHLIPATDISEQISLASKEASGTGNMKFMLNGALTLGTMDGANVEIAELAGMENIYTFGKDSDTIINLYATASYVAKDYYDNHPAIKAAVNFIISPELLAFGNEERLDRLYKELISKDWFMTLIDLEEYIEVKEKMLADYEDQDLWMTKVVHNIAKAGFFSSDRTIEQYNEDIWHSR

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Crispr_ID: CP031738_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031738_3

1276447-1276810

TypeI

I-C

Consensus_repeat	Method
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	CRT
TTTCAATCCACTCACCCATGAAGGGTGAGAC	PILER-CR
TTTCAATCCACTCACCCATGAAGGGTGAGAC	CRISPRCasFinder

5 spacers

cas2,cas1,cas4,cas8c,cas5,cas3

The CRISPR arrays of CP031738_3

>merge|CP031738|3|1276447-1276810|CRT,PILER-CR,CRISPRCasFinder
CTTTCAATCCACTCACCCATGAAGGGTGAGACAACTAATTCCGCAAAGGCATTGTTCATATAATGATTTCAATCCACTCACCCATGAAGGGTGAGACTTGCAAAATTTACGTGATAACTTTAATAAAATAATATTTCAATCCACTCACCCATGAAGGGTGAGACCAAACGTAGCAAATTCTACTTTTACAAAAGTTGGAATTTCAATCCACTCACCCATGAAGGGTGAGACGCTTTATCGATTTTTTAGAATATCTAGCCGAATCTATTTCAATCCACTCACCCATGAAGGGTGAGACGAACTCTATGTTTCCTTTTATCTGCAAAATCGATATTTCAATCCACTCACCCATGAAGGGTGAGAC

>CP031738|3|1|1276447-1276810|CRT
CTTTCAATCCACTCACCCATGAAGGGTGAGAC	AACTAATTCCGCAAAGGCATTGTTCATATAATG
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	TTGCAAAATTTACGTGATAACTTTAATAAAATAAT
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	CAAACGTAGCAAATTCTACTTTTACAAAAGTTGGA
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	GCTTTATCGATTTTTTAGAATATCTAGCCGAATCT
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	GAACTCTATGTTTCCTTTTATCTGCAAAATCGAT
ATTTCAATCCACTCACCCATGAAGGGTGAGAC

>CP031738|3|1|1276448-1276810|PILER-CR
TTTCAATCCACTCACCCATGAAGGGTGAGAC	AACTAATTCCGCAAAGGCATTGTTCATATAATGA
TTTCAATCCACTCACCCATGAAGGGTGAGAC	TTGCAAAATTTACGTGATAACTTTAATAAAATAATA
TTTCAATCCACTCACCCATGAAGGGTGAGAC	CAAACGTAGCAAATTCTACTTTTACAAAAGTTGGAA
TTTCAATCCACTCACCCATGAAGGGTGAGAC	GCTTTATCGATTTTTTAGAATATCTAGCCGAATCTA
TTTCAATCCACTCACCCATGAAGGGTGAGAC	GAACTCTATGTTTCCTTTTATCTGCAAAATCGATA
TTTCAATCCACTCACCCATGAAGGGTGAGAC

>CP031738|3|3|1276448-1276810|CRISPRCasFinder
TTTCAATCCACTCACCCATGAAGGGTGAGAC	AACTAATTCCGCAAAGGCATTGTTCATATAATGA
TTTCAATCCACTCACCCATGAAGGGTGAGAC	TTGCAAAATTTACGTGATAACTTTAATAAAATAATA
TTTCAATCCACTCACCCATGAAGGGTGAGAC	CAAACGTAGCAAATTCTACTTTTACAAAAGTTGGAA
TTTCAATCCACTCACCCATGAAGGGTGAGAC	GCTTTATCGATTTTTTAGAATATCTAGCCGAATCTA
TTTCAATCCACTCACCCATGAAGGGTGAGAC	GAACTCTATGTTTCCTTTTATCTGCAAAATCGATA
TTTCAATCCACTCACCCATGAAGGGTGAGAC

Protein	Signature genes	Signature genes Name	Protein_function
CP031738.1\|QBC35261.1\|1266372_1267608_-\|arginine-deiminase	unknown	unknown	gnl\|CDD\|234949
CP031738.1\|QBC35279.1\|1288338_1288539_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
CP031738.1\|QBC35267.1\|1272963_1273704_-\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|227095
CP031738.1\|QBC35272.1\|1277262_1278288_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
CP031738.1\|QBC35268.1\|1273791_1274898_-\|peptide-methionine-(R)-S-oxide-reductase	unknown	unknown	gnl\|CDD\|184456
CP031738.1\|QBC35271.1\|1276958_1277252_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|224262
CP031738.1\|QBC35262.1\|1267881_1268562_-\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
CP031738.1\|QBC35263.1\|1268703_1269177_+\|arginine-regulator	unknown	unknown	gnl\|CDD\|224355
CP031738.1\|QBC35266.1\|1271233_1272967_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
CP031738.1\|QBC35264.1\|1269342_1270059_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225917
CP031738.1\|QBC35274.1\|1279810_1281706_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09642_cas8c_CAS-I-C	gnl\|CDD\|273839
CP031738.1\|QBC35277.1\|1285128_1287777_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
CP031738.1\|QBC35269.1\|1274940_1275564_-\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
CP031738.1\|QBC35278.1\|1287778_1288342_-\|shikimate-kinase	unknown	unknown	gnl\|CDD\|379082
CP031738.1\|QBC35265.1\|1270081_1271161_-\|MmcQ/YjbR-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|225197
CP031738.1\|QBC35276.1\|1282566_1284975_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP031738.1\|QBC35280.1\|1288942_1289338_-\|helix-hairpin-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|181104
CP031738.1\|QBC35275.1\|1281705_1282434_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
CP031738.1\|QBC35270.1\|1275576_1276287_-\|cytochrome-c-biogenesis-protein-CcdA	unknown	unknown	gnl\|CDD\|223856
CP031738.1\|QBC35273.1\|1278284_1278959_-\|CRISPR-associated-protein-Cas4	cas4	COG1468_cas4_CAS-I-A:CAS-I-B:CAS-I-C:CAS-I-D:CAS-II-B	gnl\|CDD\|224385

Protein	Function_ID	Function_description	E-value
CP031738.1\|QBC35261.1\|1266372_1267608_-\|arginine-deiminase	gnl\|CDD\|234949	PRK01388, PRK01388, arginine deiminase; Provisional.	0
CP031738.1\|QBC35279.1\|1288338_1288539_-\|N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	2.77275e-13
CP031738.1\|QBC35267.1\|1272963_1273704_-\|DNA-binding-response-regulator	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	1.85886e-83
CP031738.1\|QBC35272.1\|1277262_1278288_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
CP031738.1\|QBC35268.1\|1273791_1274898_-\|peptide-methionine-(R)-S-oxide-reductase	gnl\|CDD\|184456	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB.	7.06236e-162
CP031738.1\|QBC35271.1\|1276958_1277252_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|224262	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms].	1.60225e-34
CP031738.1\|QBC35262.1\|1267881_1268562_-\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	7.63873e-40
CP031738.1\|QBC35263.1\|1268703_1269177_+\|arginine-regulator	gnl\|CDD\|224355	COG1438, ArgR, Arginine repressor [Transcription].	2.68589e-66
CP031738.1\|QBC35266.1\|1271233_1272967_-\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	2.55535e-65
CP031738.1\|QBC35264.1\|1269342_1270059_-\|hypothetical-protein	gnl\|CDD\|225917	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only].	1.87925e-104
CP031738.1\|QBC35274.1\|1279810_1281706_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|273839	TIGR01863, CRISPR-associated_protein_CT1133_family, CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein that tends to be found near CRISPR repeats of the DVULG subtype of CRISPR/Cas locus. We designate this family Csd1 (CRISPR/Cas Subtype DVULG protein 1). The species range for this subtype, so far, is exclusively bacterial and mesophilic, although CRISPR loci in general are particularly common among archaea and thermophilic bacteria. In a few species (Xanthomonas axonopodis pv. citri str. 306 and Streptococcus mutans UA159), homology to this protein family is split across two tandem genes; the trusted cutoff to this family is set low enough to capture at least the longer of the two.	0
CP031738.1\|QBC35277.1\|1285128_1287777_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
CP031738.1\|QBC35269.1\|1274940_1275564_-\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.89498e-35
CP031738.1\|QBC35278.1\|1287778_1288342_-\|shikimate-kinase	gnl\|CDD\|379082	pfam13238, AAA_18, AAA domain.	0.00400512
CP031738.1\|QBC35265.1\|1270081_1271161_-\|MmcQ/YjbR-family-DNA-binding-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	3.78855e-34
CP031738.1\|QBC35276.1\|1282566_1284975_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.76387e-159
CP031738.1\|QBC35280.1\|1288942_1289338_-\|helix-hairpin-helix-domain-containing-protein	gnl\|CDD\|181104	PRK07758, PRK07758, hypothetical protein; Provisional.	0.000151325
CP031738.1\|QBC35275.1\|1281705_1282434_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	1.00738e-116
CP031738.1\|QBC35270.1\|1275576_1276287_-\|cytochrome-c-biogenesis-protein-CcdA	gnl\|CDD\|223856	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones].	4.03755e-42
CP031738.1\|QBC35273.1\|1278284_1278959_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|224385	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense mechanisms].	1.18604e-43

>CP031738.1|QBC35270.1|1275576_1276287_-|cytochrome-c-biogenesis-protein-CcdA
MILSLVLMVSVFGAGLLSFFSPCIFPVLPVYLGILLDADDSKTITIFGKKLYWYGIVKTLAFIFGLSTIFVILGYGAGFLGNILYAVWFRYLLGALVIILGIHQMGLITIKSLQFQKSLTFHNNKNRNGLFNAFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLMIIYTLGLGIPFLLISFASGIVLKQFNKLKPHILLLKKVGGVLIIVMGILLMTGTLNNLAQLFG
>CP031738.1|QBC35269.1|1274940_1275564_-|TlpA-family-protein-disulfide-reductase
MKKGLLVTTGLACLGLLTACSTQDNMAKKEITQDKMSMAAKKKDKMSTSKDKSMMADKSSDKKMTNDGPMAPDFELKGIDGKTYRLSEFKGKKVYLKFWASWCSICLSTLADTEDLAKMSDKDYVVLTVVSPGHQGEKSEADFKKWFQGTDYKDLPVLLDPDGKLLEAYGVRSYPTEVFIGSDGVLAKKHIGYAKKSDIKKTLKGIH
>CP031738.1|QBC35268.1|1273791_1274898_-|peptide-methionine-(R)-S-oxide-reductase
MEHKWKLWLFIVGVVLLIGGASVLIQKGQAKAFSQGKPQLPAKKVKSTKVDPNAPVDQKMIYLAGGCFWGVEEYFSQVDGVLDAVSGYANGRGDTTNYQLIHQTGHAETVEVAYDANRISLKELLLHFFRIIDPTSLNKQGNDRGSQYRTGTYYTDKADLAIIDEVFKEKAKDYKKKIVVEKAPLKHFIKAEDYHQDYLKKNPNGYCHIDINQATYPVIDESKYPKPSATEIKAKLSADEYRVTQKNETEKAFSNRYWDSFDAGIYVDVVTGEPLFSSKDKFESGCGWPSFSRPISPDVIRYKEDKSFNMTRTEVRSRSGDSHLGHVFTDGPKDQGGLRYCINSLSITFIPKADMEAKGYGYLLSSVE
>CP031738.1|QBC35267.1|1272963_1273704_-|DNA-binding-response-regulator
MYSLLIVEDEYLVRQGIRSLVDFSQFKIDRVNEAENGQLAWDLFQKEPYDIVLTDINMPKLNGIQLAELIKQESPQTHLVFLTGYDDFNYALSALKLGADDYLLKPFSKADVEDMLGKLRKKLELSKKTETIQELVEQPQKEVSAIAMAIHERLADSDLTLKSLAQQLGFSPNYLSVLIKKDLGMPFQDYLVQERLKKAKLLLLTSNLKIYEIAEQVGFEDMNYFSQRFKQLVGVTPSQYKKGGQA
>CP031738.1|QBC35266.1|1271233_1272967_-|sensor-histidine-kinase
MKRYPLLVQLISYVFVIVIALITTLGLLYYQTSSRNIRQLIERDTRQSIRQSSQFIDAYIKPLKETTSVLAKNTEIQAFASQIHQENDKQVLQLMKMVLATNSDLQAAVLVTKDGRTVPTNSQLTMKTSSDMMAEPWYKAAIDRQAMPVLTPARQLSLSSKKEWVVSVTQEVVDAAGHNLGVLRLDIAYPTIKASLDQLQLGRQGFAFIVNDKHEFVYHPKKSVYSSSKEMAAMKPYLAIQNGYTKDKTSFVYQKLIPNSQWTLVGVASLDQLHRVQRQIFWSFLGTGLLACLICGFATVLALRRWIRPIQQLQQVILAIQKGDRQLRAQETGSPELTDLAQQFNALLDQIDSLMVAVADKEKAIGQYRLQALASQINPHFLYNTLDTIIWMAEFNDSKRVVEVTKSLAKYFRLALNQGNEYIRLADELDHVSQYLFIQKQRYGDKLSYEVQGLDVYADFVIPKLILQPLVENAIYHGIKEVDRKGMIKVTVSDTAQHLVLTVWDNGKGIEDSSLTNSQSLLARGGVGLKNVDQRLKLHYGEGYHMTIHSQSDQFTEIQLTLPKMHELMADDTQENE
>CP031738.1|QBC35265.1|1270081_1271161_-|MmcQ/YjbR-family-DNA-binding-protein
MSLASDYFSRQTPIVEKLMAYGFEKRNNGYFYNERFMEEEFEAQLRIDEAGNIWDRVIDCDLEEDYLPLQQAAWQGTYTGQVRAAYLELLERLSVACFEVTPFQSMQANRLAKHITKEWSDPMDYPFEKHPDLATYRVGGKWYAMIFSLLADKLDQIPERLVGQTCEVMTVKVNPKDLPQLLQQEGIYPAYHMSKKNWISIILDDKVTDDKLWTLVTQSRQLVNPNGLSNPNGPDYWVIPANLKYYDIDAEFAANDVILWTQKAGIAVGDYVLIYMTAPVKSIRYACQVLETDIPNEGYRKNPNIDKLMRLRKCQQYKDGLLSFDLMKKHGVAAVRGPRRLSPQLIAFLKEKEYLKENN
>CP031738.1|QBC35264.1|1269342_1270059_-|hypothetical-protein
MVEFVADQSFWELFPDAKLGVVLLKDVQNQAESPEDVKQLLADSHELVKAYLTADNFSDNQVVQVYRKAYQHFKTKKGARSSIEALLKRVSNGQSIPSINPLVDIYNAASLRFGLPVGAEDSDSFIGDLRLTTTDGGDDFYLIGDADNNPTLPNELCYKDDIGAVCRCLNWRDGERTMVTEHTKNAFLIIEALDQEGQNRLQEALDFIEGSAKMYLHAITSVHVLDKDNPHVPLFTEN
>CP031738.1|QBC35263.1|1268703_1269177_+|arginine-regulator
MNKKETRHQLIRSLISETTIHTQQELQERLQKNGITITQATLSRDMKELNLVKVTSGNDTHYEALAISQTRWEHRLRFYMEDALVMLKIVQHQIILKTLPGLAQSFGSILDAMQIPEIVATVCGDDTCLIVCEDNEQAKACYETLSHYTPPFFFSNK
>CP031738.1|QBC35262.1|1267881_1268562_-|Crp/Fnr-family-transcriptional-regulator
MIRREDYQYLRKLNDFRYFSIEQFDKIVGQMEFRKAKKDHILFFEGDKRDKLFLVTSGYFKVEQSDQSGTFMYTDFIRHGTIFPYGGLFTDDYYHFSVVAMTDVTYFYFPVDLFEEYSLENRLQMKHLYSKMSKLLELHELRVRNLITSSASSRVIQSLAILLVEMGKDSDTLPFQLTTTDIAQISGTTRETVSHVLRDLKKQELITIKGKYLTYLDKDYFLQYTK
>CP031738.1|QBC35261.1|1266372_1267608_-|arginine-deiminase
MTAQTPIHVYSEIGKLKKVLLHRPGKEIENLMPDYLERLLFDDIPFLEDAQKEHDAFAQALRDEGIEVLYLETLAAESLVTPEIREAFIDEYLSEANIRGRATKKAIRELLMAIEDNQELIEKTMAGVQKSELPEIPASEKGLTDLVESNYPFAIDPMPNLYFTRDPFATIGTGVSLNHMFSETRNRETLYGKYIFTHHPIYGGGKVPMVYDRNETTRIEGGDELVLSKDVLAVGISQRTDAASIEKLLVNIFKQNLGFKKVLAFEFANNRKFMHLDTVFTMVDYDKFTIHPEIEGDLRVYSVTYDNEELHIVEEKGDLAELLAANLGVEKVDLIRCGGDNLVAAGREQWNDGSNTLTIAPGVVVVYNRNTITNAILESKGLKLIKIHGSELVRGRGGPRCMSMPFEREDI
>CP031738.1|QBC35271.1|1276958_1277252_-|CRISPR-associated-endonuclease-Cas2
MMVLVTYDVNTETPAGRKRLRHVAKLCVDYGQRVQNSVFECSVTPAEFVDIKHRLTQIIDEKTDSIRFYLLGKNWQRRVETLGRSDSYDPDKGVLLL
>CP031738.1|QBC35272.1|1277262_1278288_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLYLTQEDFYVTKEGDNIVIKQEGKVLKRFPFRIIDGIVCFSYLGVSPALVKLCTENQINLSFHTPQGRFCGRYIGSTNGNVLLRREHYRLSDREESLEYAKRFILAKISNSRKYLLRFKRDHRQQIDTKLFEAVNDELIWALEMVQAADNKDSLRGIEGQAANQYFRIFNDLVLTDKKTFYFQGRSKRPPLDCVNALLSFGYSLLTFECQSALEAVGLDSYVGFFHTDRPGRASLALDLVEEFRSYIVDRFVFSLINKGQLQKKHFEVKENGSILLTENGRAIFIDLWQKRKHTEVEHPFTKEKVKLMLLPYVQAQLLAKAIRGDLESYPPFMV
>CP031738.1|QBC35273.1|1278284_1278959_-|CRISPR-associated-protein-Cas4
MVYAEDDYLMLSGIQHFQFCKRQWALIHIEQQWLDNEATAHGQVLHTKADNPYIKEKRKELLVSRAMPISSAELGLSGIMDVVEFYKDDQGVSLRGKRGKWLPKVVEYKRGKPKKDTRDIVQLVAQTMCLEETLDCDINEGCLYYHSVNQRVIVPMTSALRQEVKELAAEMHEVYQSQMLPKAAYFKNCQLCSLVDICKPRLSKKTRSVSRYINEAMTSEEMDL
>CP031738.1|QBC35274.1|1279810_1281706_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MDFFTSLLKTYEKAELADLVDHQKRSNEPVLLPIYHTSLKSNGKNIISVKLDKDGQFHKAEFMADKQMIIFPVTADSVARSGSHPAPHPLVDKFAYYSAEMGQSQYDSFHKQLNNWIDYCEEGDVKRFLTIVQQFILKPEFLTLILDSLIGPDYQNNQLKVTFCDATGKEKLIDLSACFLEFSIDQFQGFKNESVSTFKTLHQSYISFVEANREKLGICNISGREEQLTDKHRGLMGNAKIISVSNKREAYKGRFREREDVFSVGYETSEKIHLMLKYLLENKNTSTWLGSSQYLINWFSDDLTNDSRLDIVSPIFDDGLEEDDDDDTPPVITLATEDNKRIGKSFIKGQKLFANDATYYVAILNKTSNGRIALKYFRQLQASQLLTNLNKWQETYSWESRSKFGKSRLRTPTFHDILNVSYGVDRDRFLELDNDNFKSDQIQKLVASLIDGKPMPQSIVKKLGNNVKERHRYRKHWYQVEQVCLAILHKQNGEEFSPMLDHTNQNRSYLFGRLLAIFELIETLRYGLDGNNNDRITNAERYWTAYTGQPTKLMMLLENKIKPYEEPLKLNRRGSWMKLEKEKEEILELLNPLLETETMGKPLDYRFIFGYYAEKNYYYTKQNTEVTESEE
>CP031738.1|QBC35275.1|1281705_1282434_-|type-I-C-CRISPR-associated-protein-Cas5
MYRSRDFYVRVSGQRALFTNPATKGGSERSSYSVPTRQALNGIVDAIYYKPTFTNIVTEVKVINQIQTELQGVRALLHDYSADLSYVSYLSDVVYLIKFHFVWNEDRKDLNSDRLPAKHEAIMERSIRKGGRRDVFLGTRECLGLLDDISQEEYETTVSYYNGVNIDLGIMFHSFAYPKDKKTPLKSYFTKTVMKNGVITFKAQSECDIVNTLSSYAFKAPEEIKSVNDECMEYDAMEKGEN
>CP031738.1|QBC35276.1|1282566_1284975_-|CRISPR-associated-helicase/endonuclease-Cas3
MRMILAHYDCKKDKKQSLDEHLWHVACSSRQEASIIGQGDVLFLIGLYHDLGKADRTFQDKLLNNPNRHVDHSYAGAKYLCSIIGPHLKNRGVDKNERMTFNEMVGYVISAHHGMYDLCYYFDDAEYYGFNKFKNRINRDLDGYHYHEDIKGYALKLEKKLCDYGYKDLRELIDKAFDNYQQAMSSLNWQDKSEWDYYQSCMVRLYLSLLKNADILDTVNAYGLKISPMDKTERSFLKHSYLAAIEQKYASFGQPNNQLNTIRTEIAERVKERGKRDSKGIYRLDLPTGAGKTNLSMRYAFHQLVHHDKSRFFYITPFLSVLEQNASEIRKVTGDLGVLEHHSNVVKQANEDDDDKDSLLSAYLSDSWDSQVVLTSMVQFFQTLFKTKSANLRRFSSLINSVVILDEVQSLPIEVTTLFNLTMNFLNKVMDTTIVLCTATQPAYDSSEIDHRICYGGNLGELAEIVELTIEEKQIFSRTELRKFDDSDQKVHLTDVINLILGEENSVLAIFNTKKTVHNCYTMLKDITDRPVYQLSTNMCAQHRLDLIAKIKTELQNNIPIICISTQLIEAGVDVDFHRVIRSYSGIDSIVQAAGRCNREGKRDKGQVTLVNLTNEEENISRLTEIKAKKEATESILHKIGSPIDISTLNRDFFEYYYANNQGLMDYPLEDNLSIYDYLSLNIYQTANKKFKGKLKQAFKTAGAKMNLINNDMIGILVPYGEAEKKLAYLEELGMSHFLSAEDYQTIKSLLKELQPFTVNVRENDPLFETTKSYLNGQILVLTSEYYDTERGVKYDSASFYF
>CP031738.1|QBC35277.1|1285128_1287777_-|valine--tRNA-ligase
MTELSPKYNPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLREQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQVATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIVNKLIPIVGDEHADPEFGTGVVKITPAHDPNDFEVGQRHNLPQVNVMNDDGTMNELAGDFAGMDRFEARQATVAKLEELGALVNIEKRVHSVGHSERSGAVVEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQLWWGHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNEGLTLEEAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQYAQGSIVTVDYPVVRPAFENEAAHKGVESLKDLIRAVRNARAEVNVAPSKPITILVKTADSELEDFFTSNVNYIKRFTNPEKLEISSAIAAPELAMTSIITGAEIYLPLADLLNVEEELVRLDKELAKWQKELDMVGKKLGNERFVANAKPEVVQKEKDKQADYQAKYDATQERIAEMKKIKS
>CP031738.1|QBC35278.1|1287778_1288342_-|shikimate-kinase
MNLIIIGAQASGKMTIGQEVARQTGMTLFHNHDSIDFVLRFMPWSQESTALIERIRFAFFETFAKTGQDMIFTIVIDFNDPNDVAMLEKIQAVFQSYDQEVLFVELKTDIEERLKRNRTENRLKHKPLKRNIEWSEQDIQSTMAYAVFNPEEPPKTLTHYQKINNTQLTAAETAQLIIQKMTHIKEN
>CP031738.1|QBC35279.1|1288338_1288539_-|N-acetyltransferase
MGFTLLDLHKIELGCYDYNKQSQAVARKLGFTLEANARDRKDVQGRRCGDMRFGLLRSEWEEQKQK
>CP031738.1|QBC35280.1|1288942_1289338_-|helix-hairpin-helix-domain-containing-protein
MAKQKNRKKALKLEMKRNGLLKKAGQVFDKAVESVETAVDKTISAGKNLVEKGSQTVENLTASKERLTLDEFAGQPVVAGIRSDLVETLYAEGIHSAQAFKEWTEKDLLALKGIGPATVKKLVENGASFKK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP031738_3	3.1\|1276479\|33\|CP031738\|CRT	1276479-1276511	33	CP031738.1	8228-8260	1	0.97
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	CP031738.1	543448-543482	2	0.943
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	CP031738.1	1203824-1203858	2	0.943

1. spacer 3.1|1276479|33|CP031738|CRT matches to position: 8228-8260, mismatch: 1, identity: 0.97

aactaattccgcaaaggcattgttcatataatg	CRISPR spacer
aactaattccgcaaaggcattgtccatataatg	Protospacer
***********************.*********

2. spacer 3.2|1276544|35|CP031738|CRT matches to position: 543448-543482, mismatch: 2, identity: 0.943

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

3. spacer 3.2|1276544|35|CP031738|CRT matches to position: 1203824-1203858, mismatch: 2, identity: 0.943

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448960	Streptococcus phage Javan492, complete genome	11317-11351	0	1.0
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448762	Streptococcus phage Javan447, complete genome	11444-11478	0	1.0
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	NC_004585	Streptococcus prophage 315.2, complete genome	13501-13535	0	1.0
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448966	Streptococcus phage Javan508, complete genome	13356-13390	0	1.0
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448970	Streptococcus phage Javan516, complete genome	15236-15270	0	1.0
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448795	Streptococcus phage Javan527, complete genome	17274-17308	0	1.0
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448790	Streptococcus phage Javan515, complete genome	11731-11765	0	1.0
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448772	Streptococcus phage Javan483, complete genome	13371-13405	0	1.0
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448793	Streptococcus phage Javan523, complete genome	12062-12096	0	1.0
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448954	Streptococcus phage Javan476, complete genome	11399-11433	0	1.0
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448957	Streptococcus phage Javan484, complete genome	15312-15346	0	1.0
CP031738_3	3.3\|1276611\|35\|CP031738\|CRT	1276611-1276645	35	MK448973	Streptococcus phage Javan522, complete genome	1665-1699	0	1.0
CP031738_3	3.3\|1276611\|35\|CP031738\|CRT	1276611-1276645	35	MK448859	Streptococcus phage Javan170, complete genome	1363-1397	0	1.0
CP031738_3	3.3\|1276611\|35\|CP031738\|CRT	1276611-1276645	35	MK448778	Streptococcus phage Javan493, complete genome	1665-1699	0	1.0
CP031738_3	3.3\|1276611\|35\|CP031738\|CRT	1276611-1276645	35	MK448688	Streptococcus phage Javan161, complete genome	1363-1397	0	1.0
CP031738_3	3.5\|1276745\|34\|CP031738\|CRT	1276745-1276778	34	MK448792	Streptococcus phage Javan521, complete genome	17467-17500	0	1.0
CP031738_3	3.5\|1276745\|34\|CP031738\|CRT	1276745-1276778	34	MK448679	Streptococcus phage Javan137, complete genome	15481-15514	0	1.0
CP031738_3	3.5\|1276745\|34\|CP031738\|CRT	1276745-1276778	34	NC_004584	Streptococcus prophage 315.1, complete genome	17060-17093	0	1.0
CP031738_3	3.5\|1276745\|34\|CP031738\|CRT	1276745-1276778	34	MK448770	Streptococcus phage Javan477, complete genome	17467-17500	0	1.0
CP031738_3	3.5\|1276745\|34\|CP031738\|CRT	1276745-1276778	34	MK448978	Streptococcus phage Javan532, complete genome	16955-16988	0	1.0
CP031738_3	3.5\|1276745\|34\|CP031738\|CRT	1276745-1276778	34	MK448785	Streptococcus phage Javan507, complete genome	16955-16988	0	1.0
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448860	Streptococcus phage Javan172, complete genome	10388-10422	1	0.971
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448682	Streptococcus phage Javan143, complete genome	9628-9662	1	0.971
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448951	Streptococcus phage Javan470, complete genome	13895-13929	1	0.971
CP031738_3	3.3\|1276611\|35\|CP031738\|CRT	1276611-1276645	35	NC_004585	Streptococcus prophage 315.2, complete genome	1480-1514	1	0.971
CP031738_3	3.3\|1276611\|35\|CP031738\|CRT	1276611-1276645	35	MK448955	Streptococcus phage Javan478, complete genome	1390-1424	1	0.971
CP031738_3	3.3\|1276611\|35\|CP031738\|CRT	1276611-1276645	35	MK448966	Streptococcus phage Javan508, complete genome	1335-1369	1	0.971
CP031738_3	3.3\|1276611\|35\|CP031738\|CRT	1276611-1276645	35	MK448772	Streptococcus phage Javan483, complete genome	1335-1369	1	0.971
CP031738_3	3.3\|1276611\|35\|CP031738\|CRT	1276611-1276645	35	MK448962	Streptococcus phage Javan496, complete genome	1335-1369	1	0.971
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448960	Streptococcus phage Javan492, complete genome	11317-11352	1	0.972
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448762	Streptococcus phage Javan447, complete genome	11444-11479	1	0.972
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	NC_004585	Streptococcus prophage 315.2, complete genome	13501-13536	1	0.972
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448966	Streptococcus phage Javan508, complete genome	13356-13391	1	0.972
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448970	Streptococcus phage Javan516, complete genome	15236-15271	1	0.972
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448795	Streptococcus phage Javan527, complete genome	17274-17309	1	0.972
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448790	Streptococcus phage Javan515, complete genome	11731-11766	1	0.972
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448772	Streptococcus phage Javan483, complete genome	13371-13406	1	0.972
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448793	Streptococcus phage Javan523, complete genome	12062-12097	1	0.972
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448954	Streptococcus phage Javan476, complete genome	11399-11434	1	0.972
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448957	Streptococcus phage Javan484, complete genome	15312-15347	1	0.972
CP031738_3	3.8\|1276611\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276611-1276646	36	MK448973	Streptococcus phage Javan522, complete genome	1664-1699	1	0.972
CP031738_3	3.8\|1276611\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276611-1276646	36	MK448859	Streptococcus phage Javan170, complete genome	1362-1397	1	0.972
CP031738_3	3.8\|1276611\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276611-1276646	36	MK448778	Streptococcus phage Javan493, complete genome	1664-1699	1	0.972
CP031738_3	3.8\|1276611\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276611-1276646	36	MK448688	Streptococcus phage Javan161, complete genome	1362-1397	1	0.972
CP031738_3	3.10\|1276745\|35\|CP031738\|PILER-CR,CRISPRCasFinder	1276745-1276779	35	MK448792	Streptococcus phage Javan521, complete genome	17467-17501	1	0.971
CP031738_3	3.10\|1276745\|35\|CP031738\|PILER-CR,CRISPRCasFinder	1276745-1276779	35	MK448679	Streptococcus phage Javan137, complete genome	15481-15515	1	0.971
CP031738_3	3.10\|1276745\|35\|CP031738\|PILER-CR,CRISPRCasFinder	1276745-1276779	35	NC_004584	Streptococcus prophage 315.1, complete genome	17060-17094	1	0.971
CP031738_3	3.10\|1276745\|35\|CP031738\|PILER-CR,CRISPRCasFinder	1276745-1276779	35	MK448770	Streptococcus phage Javan477, complete genome	17467-17501	1	0.971
CP031738_3	3.10\|1276745\|35\|CP031738\|PILER-CR,CRISPRCasFinder	1276745-1276779	35	MK448978	Streptococcus phage Javan532, complete genome	16955-16989	1	0.971
CP031738_3	3.10\|1276745\|35\|CP031738\|PILER-CR,CRISPRCasFinder	1276745-1276779	35	MK448785	Streptococcus phage Javan507, complete genome	16955-16989	1	0.971
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448973	Streptococcus phage Javan522, complete genome	11652-11686	2	0.943
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448798	Streptococcus phage Javan533, complete genome	11838-11872	2	0.943
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448848	Streptococcus phage Javan126, complete genome	7971-8005	2	0.943
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448857	Streptococcus phage Javan164, complete genome	7971-8005	2	0.943
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448955	Streptococcus phage Javan478, complete genome	12575-12609	2	0.943
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448677	Streptococcus phage Javan133, complete genome	8963-8997	2	0.943
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448953	Streptococcus phage Javan474, complete genome	14112-14146	2	0.943
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	NC_009018	Streptococcus phage phi3396, complete genome	8253-8287	2	0.943
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	NC_028700	Streptococcus phage T12, complete genome	11276-11310	2	0.943
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448859	Streptococcus phage Javan170, complete genome	13830-13864	2	0.943
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448778	Streptococcus phage Javan493, complete genome	11667-11701	2	0.943
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448686	Streptococcus phage Javan157, complete genome	13615-13649	2	0.943
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448958	Streptococcus phage Javan486, complete genome	11412-11446	2	0.943
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448967	Streptococcus phage Javan510, complete genome	11839-11873	2	0.943
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448854	Streptococcus phage Javan146, complete genome	14156-14190	2	0.943
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448950	Streptococcus phage Javan464, complete genome	11322-11356	2	0.943
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448764	Streptococcus phage Javan457, complete genome	7339-7373	2	0.943
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448688	Streptococcus phage Javan161, complete genome	13784-13818	2	0.943
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	MK448782	Streptococcus phage Javan501, complete genome	14298-14332	2	0.943
CP031738_3	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	NC_004588	Streptococcus prophage 315.5, complete genome	11988-12022	2	0.943
CP031738_3	3.3\|1276611\|35\|CP031738\|CRT	1276611-1276645	35	MK448690	Streptococcus phage Javan169, complete genome	1324-1358	2	0.943
CP031738_3	3.3\|1276611\|35\|CP031738\|CRT	1276611-1276645	35	MK448676	Streptococcus phage Javan131, complete genome	1363-1397	2	0.943
CP031738_3	3.4\|1276678\|35\|CP031738\|CRT	1276678-1276712	35	MK448771	Streptococcus phage Javan481, complete genome	29841-29875	2	0.943
CP031738_3	3.4\|1276678\|35\|CP031738\|CRT	1276678-1276712	35	MK448961	Streptococcus phage Javan494, complete genome	34985-35019	2	0.943
CP031738_3	3.5\|1276745\|34\|CP031738\|CRT	1276745-1276778	34	MK448848	Streptococcus phage Javan126, complete genome	14091-14124	2	0.941
CP031738_3	3.5\|1276745\|34\|CP031738\|CRT	1276745-1276778	34	MK448857	Streptococcus phage Javan164, complete genome	14091-14124	2	0.941
CP031738_3	3.5\|1276745\|34\|CP031738\|CRT	1276745-1276778	34	MK448677	Streptococcus phage Javan133, complete genome	15082-15115	2	0.941
CP031738_3	3.5\|1276745\|34\|CP031738\|CRT	1276745-1276778	34	NC_009018	Streptococcus phage phi3396, complete genome	15111-15144	2	0.941
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448860	Streptococcus phage Javan172, complete genome	10388-10423	2	0.944
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448682	Streptococcus phage Javan143, complete genome	9628-9663	2	0.944
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448951	Streptococcus phage Javan470, complete genome	13895-13930	2	0.944
CP031738_3	3.8\|1276611\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276611-1276646	36	NC_004585	Streptococcus prophage 315.2, complete genome	1479-1514	2	0.944
CP031738_3	3.8\|1276611\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276611-1276646	36	MK448955	Streptococcus phage Javan478, complete genome	1389-1424	2	0.944
CP031738_3	3.8\|1276611\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276611-1276646	36	MK448966	Streptococcus phage Javan508, complete genome	1334-1369	2	0.944
CP031738_3	3.8\|1276611\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276611-1276646	36	MK448772	Streptococcus phage Javan483, complete genome	1334-1369	2	0.944
CP031738_3	3.8\|1276611\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276611-1276646	36	MK448962	Streptococcus phage Javan496, complete genome	1334-1369	2	0.944
CP031738_1	1.1\|858815\|37\|CP031738\|CRISPRCasFinder	858815-858851	37	MK448871	Streptococcus phage Javan196, complete genome	33077-33113	3	0.919
CP031738_1	1.1\|858815\|37\|CP031738\|CRISPRCasFinder	858815-858851	37	MK448697	Streptococcus phage Javan185, complete genome	33077-33113	3	0.919
CP031738_1	1.1\|858815\|37\|CP031738\|CRISPRCasFinder	858815-858851	37	MK448693	Streptococcus phage Javan177, complete genome	33077-33113	3	0.919
CP031738_1	1.1\|858815\|37\|CP031738\|CRISPRCasFinder	858815-858851	37	MK448772	Streptococcus phage Javan483, complete genome	32785-32821	3	0.919
CP031738_1	1.1\|858815\|37\|CP031738\|CRISPRCasFinder	858815-858851	37	MK448696	Streptococcus phage Javan183, complete genome	33077-33113	3	0.919
CP031738_1	1.1\|858815\|37\|CP031738\|CRISPRCasFinder	858815-858851	37	NC_009819	Streptococcus phage P9, complete genome	32026-32062	3	0.919
CP031738_1	1.1\|858815\|37\|CP031738\|CRISPRCasFinder	858815-858851	37	MK448868	Streptococcus phage Javan188, complete genome	33078-33114	3	0.919
CP031738_1	1.1\|858815\|37\|CP031738\|CRISPRCasFinder	858815-858851	37	MK448866	Streptococcus phage Javan184, complete genome	33077-33113	3	0.919
CP031738_1	1.1\|858815\|37\|CP031738\|CRISPRCasFinder	858815-858851	37	MK448954	Streptococcus phage Javan476, complete genome	31808-31844	3	0.919
CP031738_1	1.1\|858815\|37\|CP031738\|CRISPRCasFinder	858815-858851	37	MK448699	Streptococcus phage Javan189, complete genome	33077-33113	3	0.919
CP031738_1	1.1\|858815\|37\|CP031738\|CRISPRCasFinder	858815-858851	37	MK448867	Streptococcus phage Javan186, complete genome	33077-33113	3	0.919
CP031738_1	1.1\|858815\|37\|CP031738\|CRISPRCasFinder	858815-858851	37	MK448793	Streptococcus phage Javan523, complete genome	33421-33457	3	0.919
CP031738_3	3.4\|1276678\|35\|CP031738\|CRT	1276678-1276712	35	MK448766	Streptococcus phage Javan465, complete genome	35857-35891	3	0.914
CP031738_3	3.4\|1276678\|35\|CP031738\|CRT	1276678-1276712	35	MK448958	Streptococcus phage Javan486, complete genome	35234-35268	3	0.914
CP031738_3	3.4\|1276678\|35\|CP031738\|CRT	1276678-1276712	35	MK448793	Streptococcus phage Javan523, complete genome	36512-36546	3	0.914
CP031738_3	3.4\|1276678\|35\|CP031738\|CRT	1276678-1276712	35	MK448942	Streptococcus phage Javan448, complete genome	21269-21303	3	0.914
CP031738_3	3.4\|1276678\|35\|CP031738\|CRT	1276678-1276712	35	MK448964	Streptococcus phage Javan502, complete genome	30126-30160	3	0.914
CP031738_3	3.4\|1276678\|35\|CP031738\|CRT	1276678-1276712	35	MK448763	Streptococcus phage Javan451, complete genome	30354-30388	3	0.914
CP031738_3	3.4\|1276678\|35\|CP031738\|CRT	1276678-1276712	35	MK448777	Streptococcus phage Javan491, complete genome	30227-30261	3	0.914
CP031738_3	3.5\|1276745\|34\|CP031738\|CRT	1276745-1276778	34	MK448860	Streptococcus phage Javan172, complete genome	16970-17003	3	0.912
CP031738_3	3.5\|1276745\|34\|CP031738\|CRT	1276745-1276778	34	MK448682	Streptococcus phage Javan143, complete genome	17323-17356	3	0.912
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448973	Streptococcus phage Javan522, complete genome	11652-11687	3	0.917
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448798	Streptococcus phage Javan533, complete genome	11838-11873	3	0.917
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448848	Streptococcus phage Javan126, complete genome	7971-8006	3	0.917
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448857	Streptococcus phage Javan164, complete genome	7971-8006	3	0.917
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448955	Streptococcus phage Javan478, complete genome	12575-12610	3	0.917
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448677	Streptococcus phage Javan133, complete genome	8963-8998	3	0.917
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448953	Streptococcus phage Javan474, complete genome	14112-14147	3	0.917
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	NC_009018	Streptococcus phage phi3396, complete genome	8253-8288	3	0.917
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	NC_028700	Streptococcus phage T12, complete genome	11276-11311	3	0.917
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448859	Streptococcus phage Javan170, complete genome	13830-13865	3	0.917
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448778	Streptococcus phage Javan493, complete genome	11667-11702	3	0.917
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448686	Streptococcus phage Javan157, complete genome	13615-13650	3	0.917
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448958	Streptococcus phage Javan486, complete genome	11412-11447	3	0.917
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448967	Streptococcus phage Javan510, complete genome	11839-11874	3	0.917
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448854	Streptococcus phage Javan146, complete genome	14156-14191	3	0.917
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448950	Streptococcus phage Javan464, complete genome	11322-11357	3	0.917
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448764	Streptococcus phage Javan457, complete genome	7339-7374	3	0.917
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448688	Streptococcus phage Javan161, complete genome	13784-13819	3	0.917
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	MK448782	Streptococcus phage Javan501, complete genome	14298-14333	3	0.917
CP031738_3	3.7\|1276544\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276544-1276579	36	NC_004588	Streptococcus prophage 315.5, complete genome	11988-12023	3	0.917
CP031738_3	3.8\|1276611\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276611-1276646	36	MK448690	Streptococcus phage Javan169, complete genome	1323-1358	3	0.917
CP031738_3	3.8\|1276611\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276611-1276646	36	MK448676	Streptococcus phage Javan131, complete genome	1362-1397	3	0.917
CP031738_3	3.9\|1276678\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276678-1276713	36	MK448771	Streptococcus phage Javan481, complete genome	29841-29876	3	0.917
CP031738_3	3.9\|1276678\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276678-1276713	36	MK448961	Streptococcus phage Javan494, complete genome	34985-35020	3	0.917
CP031738_3	3.10\|1276745\|35\|CP031738\|PILER-CR,CRISPRCasFinder	1276745-1276779	35	MK448848	Streptococcus phage Javan126, complete genome	14091-14125	3	0.914
CP031738_3	3.10\|1276745\|35\|CP031738\|PILER-CR,CRISPRCasFinder	1276745-1276779	35	MK448857	Streptococcus phage Javan164, complete genome	14091-14125	3	0.914
CP031738_3	3.10\|1276745\|35\|CP031738\|PILER-CR,CRISPRCasFinder	1276745-1276779	35	MK448677	Streptococcus phage Javan133, complete genome	15082-15116	3	0.914
CP031738_3	3.10\|1276745\|35\|CP031738\|PILER-CR,CRISPRCasFinder	1276745-1276779	35	NC_009018	Streptococcus phage phi3396, complete genome	15111-15145	3	0.914
CP031738_1	1.1\|858815\|37\|CP031738\|CRISPRCasFinder	858815-858851	37	MK448946	Streptococcus phage Javan456, complete genome	36505-36541	4	0.892
CP031738_1	1.1\|858815\|37\|CP031738\|CRISPRCasFinder	858815-858851	37	MK448779	Streptococcus phage Javan497, complete genome	31734-31770	4	0.892
CP031738_1	1.1\|858815\|37\|CP031738\|CRISPRCasFinder	858815-858851	37	MK448795	Streptococcus phage Javan527, complete genome	38512-38548	4	0.892
CP031738_1	1.1\|858815\|37\|CP031738\|CRISPRCasFinder	858815-858851	37	MK448944	Streptococcus phage Javan452, complete genome	35546-35582	4	0.892
CP031738_1	1.1\|858815\|37\|CP031738\|CRISPRCasFinder	858815-858851	37	MK448968	Streptococcus phage Javan512, complete genome	31734-31770	4	0.892
CP031738_1	1.1\|858815\|37\|CP031738\|CRISPRCasFinder	858815-858851	37	NC_004584	Streptococcus prophage 315.1, complete genome	31578-31614	4	0.892
CP031738_1	1.1\|858815\|37\|CP031738\|CRISPRCasFinder	858815-858851	37	MK448797	Streptococcus phage Javan531, complete genome	31734-31770	4	0.892
CP031738_1	1.1\|858815\|37\|CP031738\|CRISPRCasFinder	858815-858851	37	MK448978	Streptococcus phage Javan532, complete genome	31472-31508	4	0.892
CP031738_1	1.1\|858815\|37\|CP031738\|CRISPRCasFinder	858815-858851	37	MK448785	Streptococcus phage Javan507, complete genome	31473-31509	4	0.892
CP031738_1	1.1\|858815\|37\|CP031738\|CRISPRCasFinder	858815-858851	37	NC_004589	Streptococcus prophage 315.6, complete genome	31831-31867	4	0.892
CP031738_3	3.9\|1276678\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276678-1276713	36	MK448766	Streptococcus phage Javan465, complete genome	35857-35892	4	0.889
CP031738_3	3.9\|1276678\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276678-1276713	36	MK448958	Streptococcus phage Javan486, complete genome	35234-35269	4	0.889
CP031738_3	3.9\|1276678\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276678-1276713	36	MK448793	Streptococcus phage Javan523, complete genome	36512-36547	4	0.889
CP031738_3	3.9\|1276678\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276678-1276713	36	MK448942	Streptococcus phage Javan448, complete genome	21269-21304	4	0.889
CP031738_3	3.9\|1276678\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276678-1276713	36	MK448964	Streptococcus phage Javan502, complete genome	30126-30161	4	0.889
CP031738_3	3.9\|1276678\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276678-1276713	36	MK448763	Streptococcus phage Javan451, complete genome	30354-30389	4	0.889
CP031738_3	3.9\|1276678\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276678-1276713	36	MK448777	Streptococcus phage Javan491, complete genome	30227-30262	4	0.889
CP031738_3	3.10\|1276745\|35\|CP031738\|PILER-CR,CRISPRCasFinder	1276745-1276779	35	MK448860	Streptococcus phage Javan172, complete genome	16970-17004	4	0.886
CP031738_3	3.10\|1276745\|35\|CP031738\|PILER-CR,CRISPRCasFinder	1276745-1276779	35	MK448682	Streptococcus phage Javan143, complete genome	17323-17357	4	0.886
CP031738_3	3.10\|1276745\|35\|CP031738\|PILER-CR,CRISPRCasFinder	1276745-1276779	35	NZ_LT604075	Lactobacillus salivarius isolate LPM01 plasmid II	136487-136521	6	0.829
CP031738_4	4.5\|1684627\|30\|CP031738\|CRT	1684627-1684656	30	KM659089	Pseudomonas sp. LM12 plasmid pLM12P1, complete sequence	1877-1906	7	0.767
CP031738_4	4.6\|1684675\|36\|CP031738\|CRT	1684675-1684710	36	MN694312	Marine virus AFVG_250M269, complete genome	21510-21545	7	0.806
CP031738_3	3.5\|1276745\|34\|CP031738\|CRT	1276745-1276778	34	NZ_LT604075	Lactobacillus salivarius isolate LPM01 plasmid II	136487-136520	8	0.765
CP031738_3	3.5\|1276745\|34\|CP031738\|CRT	1276745-1276778	34	MG592466	Vibrio phage 1.091.O._10N.286.52.B12, partial genome	24784-24817	9	0.735
CP031738_4	4.6\|1684675\|36\|CP031738\|CRT	1684675-1684710	36	MN850565	Escherichia phage ukendt, complete genome	132050-132085	9	0.75
CP031738_4	4.6\|1684675\|36\|CP031738\|CRT	1684675-1684710	36	AP014301	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S28-C84, * SEQUENCING IN PROGRESS *	716-751	9	0.75
CP031738_3	3.3\|1276611\|35\|CP031738\|CRT	1276611-1276645	35	AP014027	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C116-MedDCM-OCT-S45-C265, * SEQUENCING IN PROGRESS *	2873-2907	10	0.714
CP031738_3	3.10\|1276745\|35\|CP031738\|PILER-CR,CRISPRCasFinder	1276745-1276779	35	MG592466	Vibrio phage 1.091.O._10N.286.52.B12, partial genome	24784-24818	10	0.714
CP031738_3	3.8\|1276611\|36\|CP031738\|PILER-CR,CRISPRCasFinder	1276611-1276646	36	AP014027	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C116-MedDCM-OCT-S45-C265, * SEQUENCING IN PROGRESS *	2872-2907	11	0.694

1. spacer 3.2|1276544|35|CP031738|CRT matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 0, identity: 1.0

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgataactttaataaaataat	Protospacer
***********************************

2. spacer 3.2|1276544|35|CP031738|CRT matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 0, identity: 1.0

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgataactttaataaaataat	Protospacer
***********************************

3. spacer 3.2|1276544|35|CP031738|CRT matches to NC_004585 (Streptococcus prophage 315.2, complete genome) position: , mismatch: 0, identity: 1.0

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgataactttaataaaataat	Protospacer
***********************************

4. spacer 3.2|1276544|35|CP031738|CRT matches to MK448966 (Streptococcus phage Javan508, complete genome) position: , mismatch: 0, identity: 1.0

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgataactttaataaaataat	Protospacer
***********************************

5. spacer 3.2|1276544|35|CP031738|CRT matches to MK448970 (Streptococcus phage Javan516, complete genome) position: , mismatch: 0, identity: 1.0

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgataactttaataaaataat	Protospacer
***********************************

6. spacer 3.2|1276544|35|CP031738|CRT matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 0, identity: 1.0

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgataactttaataaaataat	Protospacer
***********************************

7. spacer 3.2|1276544|35|CP031738|CRT matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 0, identity: 1.0

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgataactttaataaaataat	Protospacer
***********************************

8. spacer 3.2|1276544|35|CP031738|CRT matches to MK448772 (Streptococcus phage Javan483, complete genome) position: , mismatch: 0, identity: 1.0

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgataactttaataaaataat	Protospacer
***********************************

9. spacer 3.2|1276544|35|CP031738|CRT matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 0, identity: 1.0

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgataactttaataaaataat	Protospacer
***********************************

10. spacer 3.2|1276544|35|CP031738|CRT matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 0, identity: 1.0

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgataactttaataaaataat	Protospacer
***********************************

11. spacer 3.2|1276544|35|CP031738|CRT matches to MK448957 (Streptococcus phage Javan484, complete genome) position: , mismatch: 0, identity: 1.0

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgataactttaataaaataat	Protospacer
***********************************

12. spacer 3.3|1276611|35|CP031738|CRT matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 0, identity: 1.0

caaacgtagcaaattctacttttacaaaagttgga	CRISPR spacer
caaacgtagcaaattctacttttacaaaagttgga	Protospacer
***********************************

13. spacer 3.3|1276611|35|CP031738|CRT matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 0, identity: 1.0

caaacgtagcaaattctacttttacaaaagttgga	CRISPR spacer
caaacgtagcaaattctacttttacaaaagttgga	Protospacer
***********************************

14. spacer 3.3|1276611|35|CP031738|CRT matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 0, identity: 1.0

caaacgtagcaaattctacttttacaaaagttgga	CRISPR spacer
caaacgtagcaaattctacttttacaaaagttgga	Protospacer
***********************************

15. spacer 3.3|1276611|35|CP031738|CRT matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 0, identity: 1.0

caaacgtagcaaattctacttttacaaaagttgga	CRISPR spacer
caaacgtagcaaattctacttttacaaaagttgga	Protospacer
***********************************

16. spacer 3.5|1276745|34|CP031738|CRT matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 0, identity: 1.0

gaactctatgtttccttttatctgcaaaatcgat	CRISPR spacer
gaactctatgtttccttttatctgcaaaatcgat	Protospacer
**********************************

17. spacer 3.5|1276745|34|CP031738|CRT matches to MK448679 (Streptococcus phage Javan137, complete genome) position: , mismatch: 0, identity: 1.0

gaactctatgtttccttttatctgcaaaatcgat	CRISPR spacer
gaactctatgtttccttttatctgcaaaatcgat	Protospacer
**********************************

18. spacer 3.5|1276745|34|CP031738|CRT matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 0, identity: 1.0

gaactctatgtttccttttatctgcaaaatcgat	CRISPR spacer
gaactctatgtttccttttatctgcaaaatcgat	Protospacer
**********************************

19. spacer 3.5|1276745|34|CP031738|CRT matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 0, identity: 1.0

gaactctatgtttccttttatctgcaaaatcgat	CRISPR spacer
gaactctatgtttccttttatctgcaaaatcgat	Protospacer
**********************************

20. spacer 3.5|1276745|34|CP031738|CRT matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 0, identity: 1.0

gaactctatgtttccttttatctgcaaaatcgat	CRISPR spacer
gaactctatgtttccttttatctgcaaaatcgat	Protospacer
**********************************

21. spacer 3.5|1276745|34|CP031738|CRT matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 0, identity: 1.0

gaactctatgtttccttttatctgcaaaatcgat	CRISPR spacer
gaactctatgtttccttttatctgcaaaatcgat	Protospacer
**********************************

22. spacer 3.2|1276544|35|CP031738|CRT matches to MK448860 (Streptococcus phage Javan172, complete genome) position: , mismatch: 1, identity: 0.971

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgataacttgaataaaataat	Protospacer
*********************** ***********

23. spacer 3.2|1276544|35|CP031738|CRT matches to MK448682 (Streptococcus phage Javan143, complete genome) position: , mismatch: 1, identity: 0.971

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgactttaataaaataat	Protospacer
******************.****************

24. spacer 3.2|1276544|35|CP031738|CRT matches to MK448951 (Streptococcus phage Javan470, complete genome) position: , mismatch: 1, identity: 0.971

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgataacttgaataaaataat	Protospacer
*********************** ***********

25. spacer 3.3|1276611|35|CP031738|CRT matches to NC_004585 (Streptococcus prophage 315.2, complete genome) position: , mismatch: 1, identity: 0.971

caaacgtagcaaattctacttttacaaaagttgga	CRISPR spacer
caaacgtagcaaattctgcttttacaaaagttgga	Protospacer
*****************.*****************

26. spacer 3.3|1276611|35|CP031738|CRT matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 1, identity: 0.971

caaacgtagcaaattctacttttacaaaagttgga	CRISPR spacer
caaacgtagcaaattctgcttttacaaaagttgga	Protospacer
*****************.*****************

27. spacer 3.3|1276611|35|CP031738|CRT matches to MK448966 (Streptococcus phage Javan508, complete genome) position: , mismatch: 1, identity: 0.971

caaacgtagcaaattctacttttacaaaagttgga	CRISPR spacer
caaacgtagcaaattctgcttttacaaaagttgga	Protospacer
*****************.*****************

28. spacer 3.3|1276611|35|CP031738|CRT matches to MK448772 (Streptococcus phage Javan483, complete genome) position: , mismatch: 1, identity: 0.971

caaacgtagcaaattctacttttacaaaagttgga	CRISPR spacer
caaacgtagcaaattctgcttttacaaaagttgga	Protospacer
*****************.*****************

29. spacer 3.3|1276611|35|CP031738|CRT matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 1, identity: 0.971

caaacgtagcaaattctacttttacaaaagttgga	CRISPR spacer
caaacgtagcaaattctgcttttacaaaagttgga	Protospacer
*****************.*****************

30. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 1, identity: 0.972

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgataactttaataaaataatg	Protospacer
***********************************.

31. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 1, identity: 0.972

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgataactttaataaaataatg	Protospacer
***********************************.

32. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to NC_004585 (Streptococcus prophage 315.2, complete genome) position: , mismatch: 1, identity: 0.972

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgataactttaataaaataatg	Protospacer
***********************************.

33. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448966 (Streptococcus phage Javan508, complete genome) position: , mismatch: 1, identity: 0.972

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgataactttaataaaataatg	Protospacer
***********************************.

34. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448970 (Streptococcus phage Javan516, complete genome) position: , mismatch: 1, identity: 0.972

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgataactttaataaaataatg	Protospacer
***********************************.

35. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 1, identity: 0.972

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgataactttaataaaataatg	Protospacer
***********************************.

36. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 1, identity: 0.972

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgataactttaataaaataatg	Protospacer
***********************************.

37. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448772 (Streptococcus phage Javan483, complete genome) position: , mismatch: 1, identity: 0.972

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgataactttaataaaataatg	Protospacer
***********************************.

38. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 1, identity: 0.972

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgataactttaataaaataatg	Protospacer
***********************************.

39. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 1, identity: 0.972

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgataactttaataaaataatg	Protospacer
***********************************.

40. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448957 (Streptococcus phage Javan484, complete genome) position: , mismatch: 1, identity: 0.972

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgataactttaataaaataatg	Protospacer
***********************************.

41. spacer 3.8|1276611|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 1, identity: 0.972

caaacgtagcaaattctacttttacaaaagttggaa	CRISPR spacer
caaacgtagcaaattctacttttacaaaagttggag	Protospacer
***********************************.

42. spacer 3.8|1276611|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 1, identity: 0.972

caaacgtagcaaattctacttttacaaaagttggaa	CRISPR spacer
caaacgtagcaaattctacttttacaaaagttggag	Protospacer
***********************************.

43. spacer 3.8|1276611|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 1, identity: 0.972

caaacgtagcaaattctacttttacaaaagttggaa	CRISPR spacer
caaacgtagcaaattctacttttacaaaagttggag	Protospacer
***********************************.

44. spacer 3.8|1276611|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 1, identity: 0.972

caaacgtagcaaattctacttttacaaaagttggaa	CRISPR spacer
caaacgtagcaaattctacttttacaaaagttggag	Protospacer
***********************************.

45. spacer 3.10|1276745|35|CP031738|PILER-CR,CRISPRCasFinder matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 1, identity: 0.971

gaactctatgtttccttttatctgcaaaatcgata	CRISPR spacer
gaactctatgtttccttttatctgcaaaatcgatg	Protospacer
**********************************.

46. spacer 3.10|1276745|35|CP031738|PILER-CR,CRISPRCasFinder matches to MK448679 (Streptococcus phage Javan137, complete genome) position: , mismatch: 1, identity: 0.971

gaactctatgtttccttttatctgcaaaatcgata	CRISPR spacer
gaactctatgtttccttttatctgcaaaatcgatg	Protospacer
**********************************.

47. spacer 3.10|1276745|35|CP031738|PILER-CR,CRISPRCasFinder matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 1, identity: 0.971

gaactctatgtttccttttatctgcaaaatcgata	CRISPR spacer
gaactctatgtttccttttatctgcaaaatcgatg	Protospacer
**********************************.

48. spacer 3.10|1276745|35|CP031738|PILER-CR,CRISPRCasFinder matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 1, identity: 0.971

gaactctatgtttccttttatctgcaaaatcgata	CRISPR spacer
gaactctatgtttccttttatctgcaaaatcgatg	Protospacer
**********************************.

49. spacer 3.10|1276745|35|CP031738|PILER-CR,CRISPRCasFinder matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 1, identity: 0.971

gaactctatgtttccttttatctgcaaaatcgata	CRISPR spacer
gaactctatgtttccttttatctgcaaaatcgatg	Protospacer
**********************************.

50. spacer 3.10|1276745|35|CP031738|PILER-CR,CRISPRCasFinder matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 1, identity: 0.971

gaactctatgtttccttttatctgcaaaatcgata	CRISPR spacer
gaactctatgtttccttttatctgcaaaatcgatg	Protospacer
**********************************.

51. spacer 3.2|1276544|35|CP031738|CRT matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 2, identity: 0.943

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

52. spacer 3.2|1276544|35|CP031738|CRT matches to MK448798 (Streptococcus phage Javan533, complete genome) position: , mismatch: 2, identity: 0.943

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

53. spacer 3.2|1276544|35|CP031738|CRT matches to MK448848 (Streptococcus phage Javan126, complete genome) position: , mismatch: 2, identity: 0.943

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

54. spacer 3.2|1276544|35|CP031738|CRT matches to MK448857 (Streptococcus phage Javan164, complete genome) position: , mismatch: 2, identity: 0.943

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

55. spacer 3.2|1276544|35|CP031738|CRT matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 2, identity: 0.943

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

56. spacer 3.2|1276544|35|CP031738|CRT matches to MK448677 (Streptococcus phage Javan133, complete genome) position: , mismatch: 2, identity: 0.943

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

57. spacer 3.2|1276544|35|CP031738|CRT matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 2, identity: 0.943

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

58. spacer 3.2|1276544|35|CP031738|CRT matches to NC_009018 (Streptococcus phage phi3396, complete genome) position: , mismatch: 2, identity: 0.943

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

59. spacer 3.2|1276544|35|CP031738|CRT matches to NC_028700 (Streptococcus phage T12, complete genome) position: , mismatch: 2, identity: 0.943

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

60. spacer 3.2|1276544|35|CP031738|CRT matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 2, identity: 0.943

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

61. spacer 3.2|1276544|35|CP031738|CRT matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 2, identity: 0.943

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

62. spacer 3.2|1276544|35|CP031738|CRT matches to MK448686 (Streptococcus phage Javan157, complete genome) position: , mismatch: 2, identity: 0.943

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

63. spacer 3.2|1276544|35|CP031738|CRT matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 2, identity: 0.943

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

64. spacer 3.2|1276544|35|CP031738|CRT matches to MK448967 (Streptococcus phage Javan510, complete genome) position: , mismatch: 2, identity: 0.943

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

65. spacer 3.2|1276544|35|CP031738|CRT matches to MK448854 (Streptococcus phage Javan146, complete genome) position: , mismatch: 2, identity: 0.943

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

66. spacer 3.2|1276544|35|CP031738|CRT matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 2, identity: 0.943

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

67. spacer 3.2|1276544|35|CP031738|CRT matches to MK448764 (Streptococcus phage Javan457, complete genome) position: , mismatch: 2, identity: 0.943

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

68. spacer 3.2|1276544|35|CP031738|CRT matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 2, identity: 0.943

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

69. spacer 3.2|1276544|35|CP031738|CRT matches to MK448782 (Streptococcus phage Javan501, complete genome) position: , mismatch: 2, identity: 0.943

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

70. spacer 3.2|1276544|35|CP031738|CRT matches to NC_004588 (Streptococcus prophage 315.5, complete genome) position: , mismatch: 2, identity: 0.943

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

71. spacer 3.3|1276611|35|CP031738|CRT matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 2, identity: 0.943

caaacgtagcaaattctacttttacaaaagttgga	CRISPR spacer
caaacgtagcgaattctgcttttacaaaagttgga	Protospacer
**********.******.*****************

72. spacer 3.3|1276611|35|CP031738|CRT matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 2, identity: 0.943

caaacgtagcaaattctacttttacaaaagttgga	CRISPR spacer
caaacgtagcgaattctgcttttacaaaagttgga	Protospacer
**********.******.*****************

73. spacer 3.4|1276678|35|CP031738|CRT matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 2, identity: 0.943

gctttatcgattttttagaatatctagccgaatct	CRISPR spacer
gatttatcgattttttggaatatctagccgaatct	Protospacer
* **************.******************

74. spacer 3.4|1276678|35|CP031738|CRT matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 2, identity: 0.943

gctttatcgattttttagaatatctagccgaatct	CRISPR spacer
gctttatcgattttttggaatatttagccgaatct	Protospacer
****************.******.***********

75. spacer 3.5|1276745|34|CP031738|CRT matches to MK448848 (Streptococcus phage Javan126, complete genome) position: , mismatch: 2, identity: 0.941

gaactctatgtttccttttatctgcaaaatcgat	CRISPR spacer
gaactctatgtttccttttatctgtaaaatcgac	Protospacer
************************.********.

76. spacer 3.5|1276745|34|CP031738|CRT matches to MK448857 (Streptococcus phage Javan164, complete genome) position: , mismatch: 2, identity: 0.941

gaactctatgtttccttttatctgcaaaatcgat	CRISPR spacer
gaactctatgtttccttttatctgtaaaatcgac	Protospacer
************************.********.

77. spacer 3.5|1276745|34|CP031738|CRT matches to MK448677 (Streptococcus phage Javan133, complete genome) position: , mismatch: 2, identity: 0.941

gaactctatgtttccttttatctgcaaaatcgat	CRISPR spacer
gaactctatgtttccttttatctgtaaaatcgac	Protospacer
************************.********.

78. spacer 3.5|1276745|34|CP031738|CRT matches to NC_009018 (Streptococcus phage phi3396, complete genome) position: , mismatch: 2, identity: 0.941

gaactctatgtttccttttatctgcaaaatcgat	CRISPR spacer
gaactctatgtttccttttatctgtaaaatcgac	Protospacer
************************.********.

79. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448860 (Streptococcus phage Javan172, complete genome) position: , mismatch: 2, identity: 0.944

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgataacttgaataaaataatg	Protospacer
*********************** ***********.

80. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448682 (Streptococcus phage Javan143, complete genome) position: , mismatch: 2, identity: 0.944

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgatgactttaataaaataatg	Protospacer
******************.****************.

81. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448951 (Streptococcus phage Javan470, complete genome) position: , mismatch: 2, identity: 0.944

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgataacttgaataaaataatg	Protospacer
*********************** ***********.

82. spacer 3.8|1276611|36|CP031738|PILER-CR,CRISPRCasFinder matches to NC_004585 (Streptococcus prophage 315.2, complete genome) position: , mismatch: 2, identity: 0.944

caaacgtagcaaattctacttttacaaaagttggaa	CRISPR spacer
caaacgtagcaaattctgcttttacaaaagttggag	Protospacer
*****************.*****************.

83. spacer 3.8|1276611|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 2, identity: 0.944

caaacgtagcaaattctacttttacaaaagttggaa	CRISPR spacer
caaacgtagcaaattctgcttttacaaaagttggag	Protospacer
*****************.*****************.

84. spacer 3.8|1276611|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448966 (Streptococcus phage Javan508, complete genome) position: , mismatch: 2, identity: 0.944

caaacgtagcaaattctacttttacaaaagttggaa	CRISPR spacer
caaacgtagcaaattctgcttttacaaaagttggag	Protospacer
*****************.*****************.

85. spacer 3.8|1276611|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448772 (Streptococcus phage Javan483, complete genome) position: , mismatch: 2, identity: 0.944

caaacgtagcaaattctacttttacaaaagttggaa	CRISPR spacer
caaacgtagcaaattctgcttttacaaaagttggag	Protospacer
*****************.*****************.

86. spacer 3.8|1276611|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 2, identity: 0.944

caaacgtagcaaattctacttttacaaaagttggaa	CRISPR spacer
caaacgtagcaaattctgcttttacaaaagttggag	Protospacer
*****************.*****************.

87. spacer 1.1|858815|37|CP031738|CRISPRCasFinder matches to MK448871 (Streptococcus phage Javan196, complete genome) position: , mismatch: 3, identity: 0.919

--ccaaaacaatagagctagacaaaaaattgagtttgac	CRISPR spacer
agtcaaa--aatagagctagacaaaaaattgagtttgac	Protospacer
  .****  ******************************

88. spacer 1.1|858815|37|CP031738|CRISPRCasFinder matches to MK448697 (Streptococcus phage Javan185, complete genome) position: , mismatch: 3, identity: 0.919

--ccaaaacaatagagctagacaaaaaattgagtttgac	CRISPR spacer
agtcaaa--aatagagctagacaaaaaattgagtttgac	Protospacer
  .****  ******************************

89. spacer 1.1|858815|37|CP031738|CRISPRCasFinder matches to MK448693 (Streptococcus phage Javan177, complete genome) position: , mismatch: 3, identity: 0.919

--ccaaaacaatagagctagacaaaaaattgagtttgac	CRISPR spacer
agtcaaa--aatagagctagacaaaaaattgagtttgac	Protospacer
  .****  ******************************

90. spacer 1.1|858815|37|CP031738|CRISPRCasFinder matches to MK448772 (Streptococcus phage Javan483, complete genome) position: , mismatch: 3, identity: 0.919

--ccaaaacaatagagctagacaaaaaattgagtttgac	CRISPR spacer
agtcaaa--aatagagctagacaaaaaattgagtttgac	Protospacer
  .****  ******************************

91. spacer 1.1|858815|37|CP031738|CRISPRCasFinder matches to MK448696 (Streptococcus phage Javan183, complete genome) position: , mismatch: 3, identity: 0.919

--ccaaaacaatagagctagacaaaaaattgagtttgac	CRISPR spacer
agtcaaa--aatagagctagacaaaaaattgagtttgac	Protospacer
  .****  ******************************

92. spacer 1.1|858815|37|CP031738|CRISPRCasFinder matches to NC_009819 (Streptococcus phage P9, complete genome) position: , mismatch: 3, identity: 0.919

--ccaaaacaatagagctagacaaaaaattgagtttgac	CRISPR spacer
agtcaaa--aatagagctagacaaaaaattgagtttgac	Protospacer
  .****  ******************************

93. spacer 1.1|858815|37|CP031738|CRISPRCasFinder matches to MK448868 (Streptococcus phage Javan188, complete genome) position: , mismatch: 3, identity: 0.919

--ccaaaacaatagagctagacaaaaaattgagtttgac	CRISPR spacer
agtcaaa--aatagagctagacaaaaaattgagtttgac	Protospacer
  .****  ******************************

94. spacer 1.1|858815|37|CP031738|CRISPRCasFinder matches to MK448866 (Streptococcus phage Javan184, complete genome) position: , mismatch: 3, identity: 0.919

--ccaaaacaatagagctagacaaaaaattgagtttgac	CRISPR spacer
agtcaaa--aatagagctagacaaaaaattgagtttgac	Protospacer
  .****  ******************************

95. spacer 1.1|858815|37|CP031738|CRISPRCasFinder matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 3, identity: 0.919

--ccaaaacaatagagctagacaaaaaattgagtttgac	CRISPR spacer
agtcaaa--aatagagctagacaaaaaattgagtttgac	Protospacer
  .****  ******************************

96. spacer 1.1|858815|37|CP031738|CRISPRCasFinder matches to MK448699 (Streptococcus phage Javan189, complete genome) position: , mismatch: 3, identity: 0.919

--ccaaaacaatagagctagacaaaaaattgagtttgac	CRISPR spacer
agtcaaa--aatagagctagacaaaaaattgagtttgac	Protospacer
  .****  ******************************

97. spacer 1.1|858815|37|CP031738|CRISPRCasFinder matches to MK448867 (Streptococcus phage Javan186, complete genome) position: , mismatch: 3, identity: 0.919

--ccaaaacaatagagctagacaaaaaattgagtttgac	CRISPR spacer
agtcaaa--aatagagctagacaaaaaattgagtttgac	Protospacer
  .****  ******************************

98. spacer 1.1|858815|37|CP031738|CRISPRCasFinder matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 3, identity: 0.919

---ccaaaacaatagagctagacaaaaaattgagtttgac	CRISPR spacer
agtccaa---aatagagctagacaaaaaattgagtttgac	Protospacer
   ****   ******************************

99. spacer 3.4|1276678|35|CP031738|CRT matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 3, identity: 0.914

gctttatcgattttttagaatatctagccgaatct	CRISPR spacer
gctttatcgatttcttggaatatctagccgaatca	Protospacer
*************.**.*****************

100. spacer 3.4|1276678|35|CP031738|CRT matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 3, identity: 0.914

gctttatcgattttttagaatatctagccgaatct	CRISPR spacer
gctttatcgatttcttggaatatctagccgaatca	Protospacer
*************.**.*****************

101. spacer 3.4|1276678|35|CP031738|CRT matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 3, identity: 0.914

gctttatcgattttttagaatatctagccgaatct	CRISPR spacer
gctttatcgatttcttggaatatctagccgaatca	Protospacer
*************.**.*****************

102. spacer 3.4|1276678|35|CP031738|CRT matches to MK448942 (Streptococcus phage Javan448, complete genome) position: , mismatch: 3, identity: 0.914

gctttatcgattttttagaatatctagccgaatct	CRISPR spacer
gatttatcgattttttggaatatttagccgaatct	Protospacer
* **************.******.***********

103. spacer 3.4|1276678|35|CP031738|CRT matches to MK448964 (Streptococcus phage Javan502, complete genome) position: , mismatch: 3, identity: 0.914

gctttatcgattttttagaatatctagccgaatct	CRISPR spacer
gatttatcgattttttggaatatttagccgaatct	Protospacer
* **************.******.***********

104. spacer 3.4|1276678|35|CP031738|CRT matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 3, identity: 0.914

gctttatcgattttttagaatatctagccgaatct	CRISPR spacer
gatttatcgattttttggaatatttagccgaatct	Protospacer
* **************.******.***********

105. spacer 3.4|1276678|35|CP031738|CRT matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 3, identity: 0.914

gctttatcgattttttagaatatctagccgaatct	CRISPR spacer
gatttatcgattttttggaatatttagccgaatct	Protospacer
* **************.******.***********

106. spacer 3.5|1276745|34|CP031738|CRT matches to MK448860 (Streptococcus phage Javan172, complete genome) position: , mismatch: 3, identity: 0.912

gaactctatgtttccttttatctgcaaaatcgat	CRISPR spacer
gaactcgatgtttccttttatctgcaaaattgac	Protospacer
****** ***********************.**.

107. spacer 3.5|1276745|34|CP031738|CRT matches to MK448682 (Streptococcus phage Javan143, complete genome) position: , mismatch: 3, identity: 0.912

gaactctatgtttccttttatctgcaaaatcgat	CRISPR spacer
gaactcgatgtttccttttatctgcaaaattgac	Protospacer
****** ***********************.**.

108. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 3, identity: 0.917

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataatt	Protospacer
******************.**** ***********

109. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448798 (Streptococcus phage Javan533, complete genome) position: , mismatch: 3, identity: 0.917

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataatt	Protospacer
******************.**** ***********

110. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448848 (Streptococcus phage Javan126, complete genome) position: , mismatch: 3, identity: 0.917

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataatg	Protospacer
******************.**** ***********.

111. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448857 (Streptococcus phage Javan164, complete genome) position: , mismatch: 3, identity: 0.917

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataatg	Protospacer
******************.**** ***********.

112. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 3, identity: 0.917

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataatt	Protospacer
******************.**** ***********

113. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448677 (Streptococcus phage Javan133, complete genome) position: , mismatch: 3, identity: 0.917

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataatg	Protospacer
******************.**** ***********.

114. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 3, identity: 0.917

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataatt	Protospacer
******************.**** ***********

115. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to NC_009018 (Streptococcus phage phi3396, complete genome) position: , mismatch: 3, identity: 0.917

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataatg	Protospacer
******************.**** ***********.

116. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to NC_028700 (Streptococcus phage T12, complete genome) position: , mismatch: 3, identity: 0.917

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataatg	Protospacer
******************.**** ***********.

117. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 3, identity: 0.917

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataatt	Protospacer
******************.**** ***********

118. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 3, identity: 0.917

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataatt	Protospacer
******************.**** ***********

119. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448686 (Streptococcus phage Javan157, complete genome) position: , mismatch: 3, identity: 0.917

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataatt	Protospacer
******************.**** ***********

120. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 3, identity: 0.917

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataatt	Protospacer
******************.**** ***********

121. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448967 (Streptococcus phage Javan510, complete genome) position: , mismatch: 3, identity: 0.917

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataatt	Protospacer
******************.**** ***********

122. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448854 (Streptococcus phage Javan146, complete genome) position: , mismatch: 3, identity: 0.917

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataatt	Protospacer
******************.**** ***********

123. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 3, identity: 0.917

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataatg	Protospacer
******************.**** ***********.

124. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448764 (Streptococcus phage Javan457, complete genome) position: , mismatch: 3, identity: 0.917

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataatt	Protospacer
******************.**** ***********

125. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 3, identity: 0.917

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataatt	Protospacer
******************.**** ***********

126. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448782 (Streptococcus phage Javan501, complete genome) position: , mismatch: 3, identity: 0.917

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataatt	Protospacer
******************.**** ***********

127. spacer 3.7|1276544|36|CP031738|PILER-CR,CRISPRCasFinder matches to NC_004588 (Streptococcus prophage 315.5, complete genome) position: , mismatch: 3, identity: 0.917

ttgcaaaatttacgtgataactttaataaaataata	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataatt	Protospacer
******************.**** ***********

128. spacer 3.8|1276611|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 3, identity: 0.917

caaacgtagcaaattctacttttacaaaagttggaa	CRISPR spacer
caaacgtagcgaattctgcttttacaaaagttggag	Protospacer
**********.******.*****************.

129. spacer 3.8|1276611|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 3, identity: 0.917

caaacgtagcaaattctacttttacaaaagttggaa	CRISPR spacer
caaacgtagcgaattctgcttttacaaaagttggag	Protospacer
**********.******.*****************.

130. spacer 3.9|1276678|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 3, identity: 0.917

gctttatcgattttttagaatatctagccgaatcta	CRISPR spacer
gatttatcgattttttggaatatctagccgaatctg	Protospacer
* **************.******************.

131. spacer 3.9|1276678|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 3, identity: 0.917

gctttatcgattttttagaatatctagccgaatcta	CRISPR spacer
gctttatcgattttttggaatatttagccgaatctg	Protospacer
****************.******.***********.

132. spacer 3.10|1276745|35|CP031738|PILER-CR,CRISPRCasFinder matches to MK448848 (Streptococcus phage Javan126, complete genome) position: , mismatch: 3, identity: 0.914

gaactctatgtttccttttatctgcaaaatcgata	CRISPR spacer
gaactctatgtttccttttatctgtaaaatcgacg	Protospacer
************************.********..

133. spacer 3.10|1276745|35|CP031738|PILER-CR,CRISPRCasFinder matches to MK448857 (Streptococcus phage Javan164, complete genome) position: , mismatch: 3, identity: 0.914

gaactctatgtttccttttatctgcaaaatcgata	CRISPR spacer
gaactctatgtttccttttatctgtaaaatcgacg	Protospacer
************************.********..

134. spacer 3.10|1276745|35|CP031738|PILER-CR,CRISPRCasFinder matches to MK448677 (Streptococcus phage Javan133, complete genome) position: , mismatch: 3, identity: 0.914

gaactctatgtttccttttatctgcaaaatcgata	CRISPR spacer
gaactctatgtttccttttatctgtaaaatcgacg	Protospacer
************************.********..

135. spacer 3.10|1276745|35|CP031738|PILER-CR,CRISPRCasFinder matches to NC_009018 (Streptococcus phage phi3396, complete genome) position: , mismatch: 3, identity: 0.914

gaactctatgtttccttttatctgcaaaatcgata	CRISPR spacer
gaactctatgtttccttttatctgtaaaatcgacg	Protospacer
************************.********..

136. spacer 1.1|858815|37|CP031738|CRISPRCasFinder matches to MK448946 (Streptococcus phage Javan456, complete genome) position: , mismatch: 4, identity: 0.892

--ccaaaacaatagagctagacaaaaaattgagtttgac	CRISPR spacer
agtcaaa--aatagagctaaacaaaaaattgagtttgac	Protospacer
  .****  **********.*******************

137. spacer 1.1|858815|37|CP031738|CRISPRCasFinder matches to MK448779 (Streptococcus phage Javan497, complete genome) position: , mismatch: 4, identity: 0.892

---ccaaaacaatagagctagacaaaaaattgagtttgac	CRISPR spacer
agtccaa---aatagagctagacaaaaaattgagtttggc	Protospacer
   ****   ****************************.*

138. spacer 1.1|858815|37|CP031738|CRISPRCasFinder matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 4, identity: 0.892

---ccaaaacaatagagctagacaaaaaattgagtttgac	CRISPR spacer
agtccaa---aatagagctagacaaaaaattgagtttggc	Protospacer
   ****   ****************************.*

139. spacer 1.1|858815|37|CP031738|CRISPRCasFinder matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 4, identity: 0.892

---ccaaaacaatagagctagacaaaaaattgagtttgac	CRISPR spacer
agtccaa---aatagagctagacaaaaaattgagtttggc	Protospacer
   ****   ****************************.*

140. spacer 1.1|858815|37|CP031738|CRISPRCasFinder matches to MK448968 (Streptococcus phage Javan512, complete genome) position: , mismatch: 4, identity: 0.892

---ccaaaacaatagagctagacaaaaaattgagtttgac	CRISPR spacer
agtccaa---aatagagctagacaaaaaattgagtttggc	Protospacer
   ****   ****************************.*

141. spacer 1.1|858815|37|CP031738|CRISPRCasFinder matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 4, identity: 0.892

---ccaaaacaatagagctagacaaaaaattgagtttgac	CRISPR spacer
agtccaa---aatagagctagacaaaaaattgagtttggc	Protospacer
   ****   ****************************.*

142. spacer 1.1|858815|37|CP031738|CRISPRCasFinder matches to MK448797 (Streptococcus phage Javan531, complete genome) position: , mismatch: 4, identity: 0.892

---ccaaaacaatagagctagacaaaaaattgagtttgac	CRISPR spacer
agtccaa---aatagagctagacaaaaaattgagtttggc	Protospacer
   ****   ****************************.*

143. spacer 1.1|858815|37|CP031738|CRISPRCasFinder matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 4, identity: 0.892

---ccaaaacaatagagctagacaaaaaattgagtttgac	CRISPR spacer
agtccaa---aatagagctagacaaaaaattgagtttggc	Protospacer
   ****   ****************************.*

144. spacer 1.1|858815|37|CP031738|CRISPRCasFinder matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 4, identity: 0.892

---ccaaaacaatagagctagacaaaaaattgagtttgac	CRISPR spacer
agtccaa---aatagagctagacaaaaaattgagtttggc	Protospacer
   ****   ****************************.*

145. spacer 1.1|858815|37|CP031738|CRISPRCasFinder matches to NC_004589 (Streptococcus prophage 315.6, complete genome) position: , mismatch: 4, identity: 0.892

---ccaaaacaatagagctagacaaaaaattgagtttgac	CRISPR spacer
agtccaa---aatagagctagacaaaaaattgagtttggc	Protospacer
   ****   ****************************.*

146. spacer 3.9|1276678|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 4, identity: 0.889

gctttatcgattttttagaatatctagccgaatcta	CRISPR spacer
gctttatcgatttcttggaatatctagccgaatcag	Protospacer
*************.**.***************** .

147. spacer 3.9|1276678|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 4, identity: 0.889

gctttatcgattttttagaatatctagccgaatcta	CRISPR spacer
gctttatcgatttcttggaatatctagccgaatcag	Protospacer
*************.**.***************** .

148. spacer 3.9|1276678|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 4, identity: 0.889

gctttatcgattttttagaatatctagccgaatcta	CRISPR spacer
gctttatcgatttcttggaatatctagccgaatcag	Protospacer
*************.**.***************** .

149. spacer 3.9|1276678|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448942 (Streptococcus phage Javan448, complete genome) position: , mismatch: 4, identity: 0.889

gctttatcgattttttagaatatctagccgaatcta	CRISPR spacer
gatttatcgattttttggaatatttagccgaatctg	Protospacer
* **************.******.***********.

150. spacer 3.9|1276678|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448964 (Streptococcus phage Javan502, complete genome) position: , mismatch: 4, identity: 0.889

gctttatcgattttttagaatatctagccgaatcta	CRISPR spacer
gatttatcgattttttggaatatttagccgaatctg	Protospacer
* **************.******.***********.

151. spacer 3.9|1276678|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 4, identity: 0.889

gctttatcgattttttagaatatctagccgaatcta	CRISPR spacer
gatttatcgattttttggaatatttagccgaatctg	Protospacer
* **************.******.***********.

152. spacer 3.9|1276678|36|CP031738|PILER-CR,CRISPRCasFinder matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 4, identity: 0.889

gctttatcgattttttagaatatctagccgaatcta	CRISPR spacer
gatttatcgattttttggaatatttagccgaatctg	Protospacer
* **************.******.***********.

153. spacer 3.10|1276745|35|CP031738|PILER-CR,CRISPRCasFinder matches to MK448860 (Streptococcus phage Javan172, complete genome) position: , mismatch: 4, identity: 0.886

gaactctatgtttccttttatctgcaaaatcgata	CRISPR spacer
gaactcgatgtttccttttatctgcaaaattgacg	Protospacer
****** ***********************.**..

154. spacer 3.10|1276745|35|CP031738|PILER-CR,CRISPRCasFinder matches to MK448682 (Streptococcus phage Javan143, complete genome) position: , mismatch: 4, identity: 0.886

gaactctatgtttccttttatctgcaaaatcgata	CRISPR spacer
gaactcgatgtttccttttatctgcaaaattgacg	Protospacer
****** ***********************.**..

155. spacer 3.10|1276745|35|CP031738|PILER-CR,CRISPRCasFinder matches to NZ_LT604075 (Lactobacillus salivarius isolate LPM01 plasmid II) position: , mismatch: 6, identity: 0.829

gaactctatgtttccttttatctgcaaaatcgata-	CRISPR spacer
cttctctatgtttgcttttatctgctaaatc-atat	Protospacer
   ********** *********** ***** ***

156. spacer 4.5|1684627|30|CP031738|CRT matches to KM659089 (Pseudomonas sp. LM12 plasmid pLM12P1, complete sequence) position: , mismatch: 7, identity: 0.767

tggcctgcttcgccttctgggctcttttct	CRISPR spacer
tcgcctgcttcgccttcccggctctgctgg	Protospacer
* ***************. ****** .*

157. spacer 4.6|1684675|36|CP031738|CRT matches to MN694312 (Marine virus AFVG_250M269, complete genome) position: , mismatch: 7, identity: 0.806

ttgcctgcttcaccttgtgggccttgtgcgcccgtt	CRISPR spacer
attgaggcttcaccttgtgggccttgtgcgcctgta	Protospacer
 *    **************************.**

158. spacer 3.5|1276745|34|CP031738|CRT matches to NZ_LT604075 (Lactobacillus salivarius isolate LPM01 plasmid II) position: , mismatch: 8, identity: 0.765

gaactctatgtttccttttatctgcaaaatcgat	CRISPR spacer
cttctctatgtttgcttttatctgctaaatcata	Protospacer
   ********** *********** *****.

159. spacer 3.5|1276745|34|CP031738|CRT matches to MG592466 (Vibrio phage 1.091.O._10N.286.52.B12, partial genome) position: , mismatch: 9, identity: 0.735

gaactctatgtttccttttatctgcaaaatcgat	CRISPR spacer
gtgatggcggttttcttttatctgcaaaaccgat	Protospacer
* . *    ****.***************.****

160. spacer 4.6|1684675|36|CP031738|CRT matches to MN850565 (Escherichia phage ukendt, complete genome) position: , mismatch: 9, identity: 0.75

ttgcctgcttcaccttgtgggccttgtgcgcccgtt	CRISPR spacer
ttacctgcctcaccttgtgggccttgaggaccaaca	Protospacer
**.*****.***************** * .** ..

161. spacer 4.6|1684675|36|CP031738|CRT matches to AP014301 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S28-C84, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.75

ttgcctgcttcaccttgtgggccttgtgcgcccgtt	CRISPR spacer
gcaccagtagcaccttgtggtccttgtgcgcctgtt	Protospacer
 ..** *.  ********** ***********.***

162. spacer 3.3|1276611|35|CP031738|CRT matches to AP014027 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C116-MedDCM-OCT-S45-C265, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.714

caaacgtagcaaattctacttttacaaaagttgga	CRISPR spacer
aaggtttatcaagttctacttttacaaaagttaat	Protospacer
 *... ** ***.*******************..

163. spacer 3.10|1276745|35|CP031738|PILER-CR,CRISPRCasFinder matches to MG592466 (Vibrio phage 1.091.O._10N.286.52.B12, partial genome) position: , mismatch: 10, identity: 0.714

gaactctatgtttccttttatctgcaaaatcgata	CRISPR spacer
gtgatggcggttttcttttatctgcaaaaccgatg	Protospacer
* . *    ****.***************.****.

164. spacer 3.8|1276611|36|CP031738|PILER-CR,CRISPRCasFinder matches to AP014027 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C116-MedDCM-OCT-S45-C265, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 11, identity: 0.694

caaacgtagcaaattctacttttacaaaagttggaa	CRISPR spacer
aaggtttatcaagttctacttttacaaaagttaatt	Protospacer
 *... ** ***.*******************..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

36317 : 48630

Synechococcus_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBC34117.1\|36317_40043_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	1.1e-38	26.3
QBC34118.1\|40203_41658_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	8.3e-54	32.5
QBC34119.1\|41685_42708_+	phosphoribosylformylglycinamidine cyclo-ligase	R9TMC7	Synechococcus_phage	4.0e-63	41.8
QBC34120.1\|42875_43430_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.8e-25	35.6
QBC34121.1\|43613_45161_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase	E3SNU8	Prochlorococcus_phage	3.4e-45	52.4
QBC34122.1\|45218_46343_-	CHAP domain-containing protein	F8HGP2	Streptococcus_phage	7.7e-07	28.6
QBC34123.1\|46595_47861_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
QBC34124.1\|48138_48630_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	7.2e-18	42.3

DBSCAN-SWA_2

342165 : 348200

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBC34391.1\|342165_342801_+	thymidylate kinase	M1PSC7	Streptococcus_phage	2.7e-65	63.4
QBC34392.1\|342818_343694_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	1.0e-62	43.8
QBC34393.1\|344357_344681_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	1.3e-28	59.4
QBC34394.1\|344685_345549_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	1.5e-114	74.7
QBC34395.1\|345575_345968_+	hypothetical protein	NA	NA	NA	NA
QBC34396.1\|346014_346644_-	copper homeostasis protein CutC	NA	NA	NA	NA
QBC34397.1\|346942_347299_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.1e-39	65.0
QBC34398.1\|347372_348200_-	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	2.9e-128	79.5

DBSCAN-SWA_3

514420 : 571700

Streptococcus_phage(56.67%)

head,tRNA,portal,capsid,holin,terminase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBC35831.1\|514420_515545_+\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
QBC34555.1\|515613_516711_+	peptide chain release factor 2	NA	NA	NA	NA
QBC34556.1\|516730_517423_+	cell division ATP-binding protein FtsE	G9BWD6	Planktothrix_phage	1.0e-30	35.6
QBC34557.1\|517406_518345_+	ABC transporter permease	NA	NA	NA	NA
QBC34558.1\|518653_519352_-	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	3.6e-79	62.9
QBC34559.1\|519519_520284_+	(S)-acetoin forming diacetyl reductase	NA	NA	NA	NA
QBC34560.1\|523226_524420_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
QBC34561.1\|524440_525787_+\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	8.2e-56	30.8
QBC34562.1\|526201_527092_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	2.3e-06	29.7
QBC34563.1\|527088_528066_+	YvcK family protein	A1IMD5	Streptococcus_phage	2.1e-138	74.2
QBC34564.1\|528062_528974_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	2.9e-105	64.4
QBC34565.1\|529150_530566_-	recombinase family protein	A5GZ62	Lactococcus_phage	1.4e-109	47.2
QBC34566.1\|530716_531319_-	hypothetical protein	Q4ZA70	Staphylococcus_virus	4.3e-33	41.9
QBC34567.1\|531284_532034_-	helix-turn-helix domain-containing protein	A0A097PBE5	Streptococcus_pyogenes_phage	4.5e-80	63.8
QBC34568.1\|532420_532579_+	hypothetical protein	J7KH24	Streptococcus_phage	7.1e-20	88.5
QBC34569.1\|532677_533319_-	hypothetical protein	J7KJ31	Streptococcus_phage	1.5e-116	100.0
QBC34570.1\|533411_533618_+	XRE family transcriptional regulator	A0A1X9I5S3	Streptococcus_phage	1.1e-17	64.7
QBC34571.1\|533659_533905_+	hypothetical protein	A0A097PAP6	Streptococcus_pyogenes_phage	1.6e-34	93.8
QBC34572.1\|533863_534073_-	hypothetical protein	NA	NA	NA	NA
QBC34573.1\|534235_534466_-	hypothetical protein	NA	NA	NA	NA
QBC34574.1\|534610_534796_+	XRE family transcriptional regulator	J7KH19	Streptococcus_phage	3.5e-18	68.9
QBC34575.1\|534868_535114_+	hypothetical protein	NA	NA	NA	NA
QBC34576.1\|535260_535473_+	hypothetical protein	NA	NA	NA	NA
QBC34577.1\|535460_535643_+	hypothetical protein	A0A2P0ZLA4	Lactobacillus_phage	4.0e-06	43.8
QBC34578.1\|535752_536064_+	hypothetical protein	A0A1S5PRW6	Streptococcus_phage	8.0e-23	48.5
QBC34579.1\|536050_536743_+	DNA-binding protein	J7KC09	Streptococcus_phage	5.9e-127	96.1
QBC34580.1\|536838_538074_+	DEAD/DEAH box helicase	J7KK96	Streptococcus_phage	2.8e-228	95.1
QBC34581.1\|538089_538548_+	DUF669 domain-containing protein	A0A1P8VVN0	Streptococcus_phage	2.2e-77	94.1
QBC34582.1\|538550_539363_+	hypothetical protein	J7KH42	Streptococcus_phage	1.9e-153	97.4
QBC34583.1\|539352_540828_+	DNA primase	A0A1P8VVM0	Streptococcus_phage	2.4e-242	84.2
QBC34584.1\|541089_541503_+	hypothetical protein	A0A2H4JHE6	uncultured_Caudovirales_phage	1.6e-15	51.1
QBC34585.1\|541499_541820_+	VRR-NUC domain-containing protein	A0A1P8VVL5	Streptococcus_phage	1.9e-51	95.3
QBC34586.1\|541803_542160_+	hypothetical protein	A0A1P8VVP9	Streptococcus_phage	7.7e-54	87.3
QBC34587.1\|542284_542566_+	DUF1599 domain-containing protein	J7KDH9	Streptococcus_phage	2.5e-31	75.0
QBC34588.1\|542558_542744_+	hypothetical protein	A3F626	Streptococcus_phage	1.7e-12	94.7
QBC34589.1\|542740_543010_+	hypothetical protein	A0A1P8VVR6	Streptococcus_phage	3.1e-47	100.0
QBC34590.1\|543019_543433_+	hypothetical protein	Q938M1	Temperate_phage	6.4e-36	65.2
QBC34591.1\|543429_543714_+	hypothetical protein	A3F628	Streptococcus_phage	4.6e-33	79.8
QBC34592.1\|543717_544200_+	class I SAM-dependent methyltransferase	A0A097PAU8	Streptococcus_pyogenes_phage	9.6e-92	98.8
QBC34593.1\|544165_544954_+	site-specific DNA-methyltransferase	A0A1S5SE41	Streptococcus_phage	5.7e-134	92.3
QBC34594.1\|545001_545727_+	DUF1642 domain-containing protein	Q938L9	Temperate_phage	3.1e-25	44.8
QBC34595.1\|545921_546218_+	hypothetical protein	A0A097PAV3	Streptococcus_pyogenes_phage	1.4e-32	98.5
QBC34596.1\|546169_546607_+	DUF1492 domain-containing protein	A0A097PBF1	Streptococcus_pyogenes_phage	6.7e-76	97.9
QBC34597.1\|547189_548119_+	hypothetical protein	A0A126HAU2	Lactococcus_phage	3.7e-100	71.8
QBC34598.1\|548245_548623_-	HicB family protein	I3NLB2	Bifidobacterium_phage	3.3e-15	44.0
QBC34599.1\|548674_548860_-	addiction module toxin, HicA family	D6PSW1	Lactobacillus_phage	1.7e-09	54.0
QBC34600.1\|549095_549434_+	HNH endonuclease	J7KH36	Streptococcus_phage	3.0e-55	90.7
QBC34601.1\|549604_550072_+\|terminase	phage terminase small subunit P27 family	J7KC46	Streptococcus_phage	3.9e-82	98.7
QBC34602.1\|550074_550305_+	hypothetical protein	NA	NA	NA	NA
QBC35832.1\|550308_552063_+\|terminase	terminase large subunit	J7KKD1	Streptococcus_phage	0.0e+00	96.1
QBC34603.1\|552222_552447_+	hypothetical protein	Q938K9	Temperate_phage	3.6e-17	61.4
QBC34604.1\|552480_553701_+\|portal	phage portal protein	J7KDU3	Streptococcus_phage	6.9e-187	81.9
QBC34605.1\|554367_555555_+\|capsid	phage major capsid protein	J7KJ82	Streptococcus_phage	1.3e-158	74.7
QBC34606.1\|555699_556002_+	DNA packaging protein, QLRG family	J7KC36	Streptococcus_phage	1.3e-41	88.8
QBC34607.1\|555998_556346_+\|head,tail	head-tail adaptor protein	J7KJ42	Streptococcus_phage	2.9e-50	88.2
QBC34608.1\|556342_556720_+	HK97 gp10 family phage protein	J7KDM3	Streptococcus_phage	1.8e-45	72.8
QBC34609.1\|556716_557142_+	hypothetical protein	J7KBZ9	Streptococcus_phage	7.2e-67	84.4
QBC34610.1\|557157_557766_+\|tail	phage tail protein	J7KKC8	Streptococcus_phage	6.7e-74	71.9
QBC34611.1\|557818_558145_+	hypothetical protein	J7KK85	Streptococcus_phage	8.3e-39	75.0
QBC34612.1\|558354_562278_+\|tail	phage tail tape measure protein	J7KDT4	Streptococcus_phage	1.9e-238	48.5
QBC34613.1\|562277_562985_+\|tail	phage tail protein	Q938K2	Temperate_phage	6.8e-94	71.9
QBC34614.1\|562981_565126_+	peptidase	Q938K1	Temperate_phage	0.0e+00	94.7
QBC34615.1\|565122_566133_+	hyaluronoglucosaminidase	Q938K0	Temperate_phage	7.8e-136	75.8
QBC34616.1\|566145_568032_+	hyaluronidase	Q938J9	Temperate_phage	3.1e-218	84.7
QBC34617.1\|568043_568475_+	DUF1617 family protein	Q938J8	Temperate_phage	1.3e-63	89.5
QBC34618.1\|568477_569095_+	DUF1366 domain-containing protein	Q938J7	Temperate_phage	5.0e-77	89.3
QBC34619.1\|569104_569380_+	hypothetical protein	A7J2B2	Streptococcus_phage	2.6e-41	100.0
QBC34620.1\|569376_569604_+\|holin	phage holin	A7J2B3	Streptococcus_phage	5.8e-31	98.7
QBC34621.1\|569719_570925_+	CHAP domain-containing protein	Q938J4	Temperate_phage	1.6e-204	83.3
QBC34622.1\|570992_571700_-	exotoxin type C	A0A097PAT7	Streptococcus_pyogenes_phage	3.9e-09	27.1

DBSCAN-SWA_4

663130 : 673733

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBC34698.1\|663130_665341_-	LTA synthase family protein	W6LM83	Streptococcus_phage	1.0e-265	68.6
QBC34699.1\|665448_666612_+	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	3.4e-143	65.1
QBC34700.1\|666608_667295_+	3-dehydroquinase	W6LP76	Streptococcus_phage	7.0e-88	68.9
QBC34701.1\|667388_668555_+	chorismate synthase	A0A291AU41	Pandoravirus	4.5e-34	32.8
QBC34702.1\|668615_668957_+	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	2.6e-19	41.1
QBC34703.1\|669177_670530_+	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	5.9e-30	24.0
QBC34704.1\|670617_671886_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
QBC34705.1\|671915_672356_-	hypothetical protein	NA	NA	NA	NA
QBC34706.1\|672590_673733_+	cysteine desulfurase	A0A1X6WFP1	Pacmanvirus	7.7e-23	27.5

DBSCAN-SWA_5

765160 : 860688

107

Streptococcus_phage(36.84%)

head,tRNA,integrase,transposase,portal,capsid,terminase,tail

attL 779459:779507|attR 818966:819014

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBC34793.1\|765160_766060_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
QBC34794.1\|766132_767371_+	GTPase HflX	NA	NA	NA	NA
QBC34795.1\|767363_767999_+	cystathionine beta-lyase	NA	NA	NA	NA
QBC34796.1\|768013_768943_+	ribonuclease Z	NA	NA	NA	NA
QBC34797.1\|768942_769707_+	SDR family oxidoreductase	NA	NA	NA	NA
QBC34798.1\|769703_771914_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	3.9e-71	30.2
QBC34799.1\|772064_772583_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	3.9e-30	42.4
QBC34800.1\|772663_773347_+	DnaD domain protein	Q938N2	Temperate_phage	2.9e-09	36.8
QBC34801.1\|773343_774000_+	endonuclease III	NA	NA	NA	NA
QBC34802.1\|774071_774758_+\|tRNA	tRNA (adenine-N(1))-methyltransferase	NA	NA	NA	NA
QBC34803.1\|774747_775536_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
QBC34804.1\|775570_776677_+	FAD-binding oxidoreductase	NA	NA	NA	NA
QBC34805.1\|776734_777604_+	glucose-1-phosphate thymidylyltransferase	K7QKA7	Escherichia_phage	2.7e-100	64.2
QBC34806.1\|777603_778197_+	dTDP-4-dehydrorhamnose 3,5-epimerase	H9NC63	Sphingomonas_phage	3.7e-08	28.2
QBC34807.1\|778440_779481_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.5e-68	43.9
779459:779507	attL	NA	NA	NA	NA
QBC34808.1\|779574_780714_-\|integrase	site-specific integrase	A1EAB7	Streptococcus_phage	3.4e-119	56.3
QBC34809.1\|780849_781530_-	hypothetical protein	A0A097PAS7	Streptococcus_pyogenes_phage	4.7e-76	88.3
QBC34810.1\|781567_782323_-	helix-turn-helix domain-containing protein	A0A097PBE5	Streptococcus_pyogenes_phage	2.2e-82	64.5
QBC34811.1\|782482_782710_+	XRE family transcriptional regulator	A0A141E1R7	Streptococcus_phage	4.5e-15	60.0
QBC34812.1\|782760_783486_+	oxidoreductase	A0A141E1D3	Streptococcus_phage	1.8e-94	72.4
QBC34813.1\|783517_783784_+	hypothetical protein	A0A1S5SC19	Streptococcus_phage	1.1e-23	66.3
QBC34814.1\|783718_784525_-	TIGR02391 family protein	A0A1S5SBU1	Streptococcus_phage	2.3e-122	81.7
QBC34815.1\|784666_784903_-	hypothetical protein	NA	NA	NA	NA
QBC34816.1\|785045_785357_+	excisionase	A0A1S5SA25	Streptococcus_phage	4.1e-43	78.4
QBC34817.1\|785358_785544_+	hypothetical protein	Q938N3	Temperate_phage	1.2e-21	90.2
QBC34818.1\|785643_785883_+	transcriptional regulator	A0A060QMU7	Streptococcus_phage	3.0e-14	51.4
QBC34819.1\|786041_786428_+	DnaD domain protein	Q938N2	Temperate_phage	1.1e-24	47.3
QBC34820.1\|786408_786642_+	hypothetical protein	Q938N1	Temperate_phage	1.8e-35	94.8
QBC34821.1\|786638_786779_+	hypothetical protein	A0A1X9I6Y1	Streptococcus_phage	3.4e-05	54.5
QBC34822.1\|786787_786994_+	hypothetical protein	NA	NA	NA	NA
QBC34823.1\|787049_787379_+	hypothetical protein	J7KGX3	Streptococcus_phage	2.1e-45	83.5
QBC34824.1\|787381_788173_+	phage recombination protein Bet	A0A1S5SFP4	Streptococcus_phage	1.4e-119	82.0
QBC34825.1\|788182_789211_+	DUF1351 domain-containing protein	E8ZD61	Streptococcus_phage	7.2e-121	65.6
QBC34826.1\|789406_789745_+	hypothetical protein	M1PKX3	Streptococcus_phage	4.0e-12	37.5
QBC34827.1\|789741_790254_+	hypothetical protein	Q708P9	Streptococcus_phage	2.9e-62	73.2
QBC34828.1\|790240_790435_+	hypothetical protein	A3F626	Streptococcus_phage	9.7e-11	86.5
QBC34829.1\|790729_791191_+	DUF1642 domain-containing protein	A0A097PAV5	Streptococcus_pyogenes_phage	4.5e-46	60.1
QBC34830.1\|791640_792081_+	ArpU family transcriptional regulator	Q938L8	Temperate_phage	4.2e-78	98.6
QBC34831.1\|792208_792430_+	hypothetical protein	NA	NA	NA	NA
QBC34832.1\|792395_793310_+	hypothetical protein	NA	NA	NA	NA
QBC34833.1\|793328_793790_+	hypothetical protein	NA	NA	NA	NA
QBC34834.1\|793817_794300_+\|terminase	terminase small subunit	E0Y3R8	Staphylococcus_virus	3.3e-15	40.3
QBC34835.1\|794277_795567_+\|terminase	PBSX family phage terminase large subunit	A0A2H4IYR5	uncultured_Caudovirales_phage	1.5e-184	74.9
QBC34836.1\|795578_797081_+\|portal	phage portal protein	C9W9H5	Streptococcus_virus	1.6e-140	54.5
QBC34837.1\|797061_798624_+\|head	phage head morphogenesis protein	U6E9F1	Streptococcus_phage	1.6e-47	44.2
QBC34838.1\|798627_798813_+	hypothetical protein	NA	NA	NA	NA
QBC34839.1\|799198_799465_+	hypothetical protein	A0A097PAR8	Streptococcus_pyogenes_phage	1.7e-26	72.7
QBC34840.1\|799608_800142_+	DUF4355 domain-containing protein	A0A141E0S7	Streptococcus_phage	1.8e-14	82.5
QBC34841.1\|800151_800532_+\|head	head decoration protein	A0A0K2CNR0	Brevibacillus_phage	6.4e-06	36.3
QBC34842.1\|800534_801584_+\|capsid	minor capsid protein E	B0YL60	Streptococcus_virus	2.6e-105	56.9
QBC34843.1\|801595_801862_+	hypothetical protein	NA	NA	NA	NA
QBC34844.1\|801873_802227_+	hypothetical protein	A0A2H4J002	uncultured_Caudovirales_phage	7.4e-25	49.6
QBC34845.1\|802223_802532_+	hypothetical protein	A0A2P1JTW8	Anoxybacillus_phage	5.7e-13	40.2
QBC34846.1\|802512_802878_+	HK97 gp10 family phage protein	A0A097BY98	Enterococcus_phage	7.7e-17	46.3
QBC34847.1\|802874_803264_+\|capsid	phage capsid protein	Q38611	Lactococcus_phage	1.6e-44	69.0
QBC35840.1\|803360_803927_+\|tail	phage major tail protein, TP901-1 family	D7RWD5	Brochothrix_phage	5.7e-43	53.3
QBC34848.1\|803986_804340_+	hypothetical protein	Q77RZ7	Lactococcus_phage	5.5e-20	48.6
QBC34849.1\|804381_804711_+	hypothetical protein	A0A1P8BLR3	Lactococcus_phage	5.7e-11	40.6
QBC34850.1\|804725_808361_+\|tail	phage tail protein	U6E979	Streptococcus_phage	4.0e-04	28.0
QBC34851.1\|808393_809173_+\|tail	phage tail protein	A3F655	Streptococcus_phage	9.2e-68	55.6
QBC34852.1\|809169_811221_+	hypothetical protein	A3F656	Streptococcus_phage	0.0e+00	83.8
QBC34853.1\|811217_812339_+	hyaluronoglucosaminidase	A7J2A8	Streptococcus_phage	1.9e-127	73.3
QBC34854.1\|812351_814265_+	hyaluronidase	Q938J9	Temperate_phage	2.7e-92	61.3
QBC34855.1\|814278_814440_+	hypothetical protein	NA	NA	NA	NA
QBC34856.1\|814442_815054_+	DUF1366 domain-containing protein	Q938J7	Temperate_phage	5.7e-81	91.1
QBC34857.1\|815064_815361_+	hypothetical protein	Q938J6	Temperate_phage	3.7e-46	98.0
QBC34858.1\|815357_815543_+	hypothetical protein	Q938J5	Temperate_phage	1.9e-24	95.1
QBC34859.1\|815628_816918_+	lysin	Q5MY96	Streptococcus_phage	2.6e-237	92.7
QBC35841.1\|817191_817869_+	exotoxin	A0A075M4C7	Staphylococcus_phage	2.4e-27	32.4
QBC34860.1\|817894_818605_+	exotoxin type H	NA	NA	NA	NA
QBC34861.1\|819208_819685_+	8-oxo-dGTP diphosphatase	NA	NA	NA	NA
818966:819014	attR	NA	NA	NA	NA
QBC34862.1\|819742_820924_+	AI-2E family transporter	NA	NA	NA	NA
QBC34863.1\|820913_822161_+	tetratricopeptide repeat protein	NA	NA	NA	NA
QBC34864.1\|822219_823872_-	fibronectin/fibrinogen-binding protein	A0A1J0F9J4	Only_Syngen_Nebraska_virus	1.7e-07	41.0
QBC34865.1\|824225_825224_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
QBC34866.1\|825228_825393_+	hypothetical protein	NA	NA	NA	NA
QBC34867.1\|825568_826438_+	ABC transporter permease	NA	NA	NA	NA
QBC34868.1\|826434_827193_+	ATP-binding cassette domain-containing protein	A0A1V0SE00	Indivirus	5.9e-11	28.3
QBC34869.1\|827396_829058_+	ribonuclease J 2	NA	NA	NA	NA
QBC34870.1\|829190_829976_+	esterase family protein	NA	NA	NA	NA
QBC34871.1\|830005_830332_+	hypothetical protein	NA	NA	NA	NA
QBC34872.1\|830377_832285_+	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	3.4e-55	30.9
QBC34873.1\|832571_833540_+	thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha	NA	NA	NA	NA
QBC35842.1\|833598_834597_+	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA
QBC34874.1\|834781_836191_+	dihydrolipoamide acetyltransferase	NA	NA	NA	NA
QBC34875.1\|836245_836485_-	hypothetical protein	NA	NA	NA	NA
QBC34876.1\|836517_838281_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	1.2e-33	25.5
QBC34877.1\|838296_838524_-	hypothetical protein	NA	NA	NA	NA
QBC34878.1\|838954_841372_-	hyaluronate lyase	NA	NA	NA	NA
QBC34879.1\|841604_842594_+	lipoate--protein ligase	A0A2H4UVX5	Bodo_saltans_virus	4.1e-12	23.9
QBC34880.1\|842702_843494_-	glutamine amidotransferase	NA	NA	NA	NA
QBC34881.1\|843493_844831_-	Mur ligase family protein	NA	NA	NA	NA
QBC34882.1\|844943_845795_+	TIGR00159 family protein	NA	NA	NA	NA
QBC34883.1\|845791_846748_+	YbbR-like domain-containing protein	NA	NA	NA	NA
QBC34884.1\|846801_848157_+	phosphoglucosamine mutase	NA	NA	NA	NA
QBC34885.1\|848280_848922_+	hypothetical protein	NA	NA	NA	NA
QBC34886.1\|848984_850115_+	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA
QBC34887.1\|850124_850877_+	acyl-[acyl-carrier-protein] thioesterase	NA	NA	NA	NA
QBC34888.1\|850876_851641_+	TIGR01457 family HAD-type hydrolase	NA	NA	NA	NA
QBC34889.1\|851640_852273_+	TIGR01906 family membrane protein	NA	NA	NA	NA
QBC34890.1\|852717_856824_+	type II CRISPR RNA-guided endonuclease Cas9	NA	NA	NA	NA
QBC34891.1\|856823_857693_+	type II CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
QBC34892.1\|857689_858031_+	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA
QBC34893.1\|858020_858683_+	type II-A CRISPR-associated protein Csn2	NA	NA	NA	NA
QBC35843.1\|859017_859197_+	nucleoside-diphosphate kinase	NA	NA	NA	NA
QBC34894.1\|859260_859509_+	nucleoside-diphosphate kinase	NA	NA	NA	NA
QBC34895.1\|859554_860688_+\|transposase	ISAs1 family transposase IS1548	NA	NA	NA	NA

DBSCAN-SWA_6

1170208 : 1185082

Temperate_phage(42.86%)

tail,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBC35172.1\|1170208_1171144_+	dihydroorotate oxidase	A0A1V0SH91	Hokovirus	4.6e-66	45.1
QBC35173.1\|1171443_1173306_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.4e-90	34.0
QBC35174.1\|1173837_1174020_-	Paratox	A3F673	Streptococcus_phage	5.3e-19	75.0
QBC35175.1\|1174132_1174915_-	exotoxin	A0A097PAT7	Streptococcus_pyogenes_phage	4.3e-49	45.8
QBC35176.1\|1175162_1176287_-	Fic family protein	D7RWK9	Brochothrix_phage	3.1e-93	49.1
QBC35177.1\|1176422_1177640_-\|holin	holin	A0A1P8VVM5	Streptococcus_phage	1.4e-163	60.1
QBC35178.1\|1177758_1177986_-\|holin	phage holin	A7J2B3	Streptococcus_phage	2.0e-31	100.0
QBC35179.1\|1177982_1178255_-	hypothetical protein	A7J2B2	Streptococcus_phage	3.2e-36	92.1
QBC35180.1\|1178264_1178882_-	DUF1366 domain-containing protein	Q938J7	Temperate_phage	5.0e-77	89.3
QBC35181.1\|1178884_1179316_-	DUF1617 family protein	Q938J8	Temperate_phage	1.3e-63	89.5
QBC35182.1\|1179327_1181214_-	hyaluronidase	Q938J9	Temperate_phage	4.4e-217	84.6
QBC35183.1\|1181226_1182237_-	hyaluronoglucosaminidase	Q938K0	Temperate_phage	7.8e-136	75.8
QBC35184.1\|1182233_1184378_-	peptidase	Q938K1	Temperate_phage	0.0e+00	94.7
QBC35185.1\|1184374_1185082_-\|tail	phage tail protein	Q938K2	Temperate_phage	6.8e-94	71.9

DBSCAN-SWA_7

1197844 : 1218369

Streptococcus_phage(69.23%)

integrase

attL 1203456:1203470|attR 1219648:1219662

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBC35187.1\|1197844_1198198_-	HNH endonuclease	J7KH36	Streptococcus_phage	2.4e-55	90.7
QBC35188.1\|1198432_1198615_+	type II toxin-antitoxin system HicA family toxin	D6PSW1	Lactobacillus_phage	5.7e-05	44.4
QBC35189.1\|1201113_1201440_-	hypothetical protein	A0A097PAV3	Streptococcus_pyogenes_phage	1.5e-27	98.3
QBC35190.1\|1202351_1203140_-	site-specific DNA-methyltransferase	A0A1S5SE41	Streptococcus_phage	5.7e-134	92.3
QBC35191.1\|1203105_1203588_-	class I SAM-dependent methyltransferase	A0A097PAU8	Streptococcus_pyogenes_phage	9.6e-92	98.8
1203456:1203470	attL	NA	NA	NA	NA
QBC35192.1\|1203591_1203876_-	hypothetical protein	A3F628	Streptococcus_phage	4.6e-33	79.8
QBC35193.1\|1203872_1204286_-	hypothetical protein	Q938M1	Temperate_phage	6.4e-36	65.2
QBC35194.1\|1204295_1204565_-	hypothetical protein	A0A1P8VVR6	Streptococcus_phage	3.1e-47	100.0
QBC35195.1\|1204561_1204747_-	hypothetical protein	A3F626	Streptococcus_phage	1.7e-12	94.7
QBC35196.1\|1204739_1205021_-	DUF1599 domain-containing protein	J7KDH9	Streptococcus_phage	2.5e-31	75.0
QBC35197.1\|1205145_1205502_-	hypothetical protein	A0A1P8VVP9	Streptococcus_phage	7.7e-54	87.3
QBC35198.1\|1205485_1205806_-	VRR-NUC domain-containing protein	A0A1P8VVL5	Streptococcus_phage	1.9e-51	95.3
QBC35199.1\|1205802_1206216_-	hypothetical protein	A0A2H4JHE6	uncultured_Caudovirales_phage	1.6e-15	51.1
QBC35200.1\|1206477_1207953_-	DNA primase	A0A1P8VVM0	Streptococcus_phage	2.4e-242	84.2
QBC35201.1\|1207942_1208755_-	hypothetical protein	J7KH42	Streptococcus_phage	1.9e-153	97.4
QBC35202.1\|1208757_1209216_-	DUF669 domain-containing protein	A0A1P8VVN0	Streptococcus_phage	2.2e-77	94.1
QBC35203.1\|1209231_1210467_-	DEAD/DEAH box helicase	J7KK96	Streptococcus_phage	2.8e-228	95.1
QBC35204.1\|1210562_1211255_-	DNA-binding protein	J7KC09	Streptococcus_phage	5.9e-127	96.1
QBC35205.1\|1211241_1211553_-	hypothetical protein	A0A1S5PRW6	Streptococcus_phage	8.0e-23	48.5
QBC35206.1\|1211662_1211845_-	hypothetical protein	A0A2P0ZLA4	Lactobacillus_phage	4.0e-06	43.8
QBC35207.1\|1211832_1212045_-	hypothetical protein	NA	NA	NA	NA
QBC35208.1\|1212191_1212437_-	hypothetical protein	NA	NA	NA	NA
QBC35209.1\|1212701_1212914_-	XRE family transcriptional regulator	A0A1X9I583	Streptococcus_phage	1.1e-10	56.7
QBC35210.1\|1213115_1213871_+	XRE family transcriptional regulator	A0A1S5S8S8	Streptococcus_phage	2.8e-77	60.8
QBC35211.1\|1213882_1214401_+	restriction endonuclease	E8ZDN5	Streptococcus_phage	1.6e-31	45.9
QBC35212.1\|1214524_1215667_+\|integrase	site-specific integrase	M1NRJ9	Streptococcus_phage	2.4e-173	77.4
QBC35213.1\|1215755_1216031_-	DNA-binding protein HU	A7KV42	Bacillus_phage	2.6e-25	73.0
QBC35214.1\|1216129_1216717_-	DUF2140 family protein	NA	NA	NA	NA
QBC35215.1\|1216694_1217555_-	GDSL family lipase	NA	NA	NA	NA
QBC35851.1\|1217529_1218369_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	7.0e-13	35.7
1219648:1219662	attR	NA	NA	NA	NA

DBSCAN-SWA_8

1393069 : 1466179

Streptococcus_phage(74.07%)

terminase,tRNA,integrase,portal,capsid,head,tail

attL 1421958:1421974|attR 1462775:1462791

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBC35360.1\|1393069_1395109_-\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
QBC35361.1\|1395486_1396404_-\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
QBC35362.1\|1396367_1396574_-	hypothetical protein	NA	NA	NA	NA
QBC35363.1\|1396775_1397330_-	hypothetical protein	NA	NA	NA	NA
QBC35364.1\|1397440_1398280_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.9e-50	40.3
QBC35365.1\|1398401_1399550_-	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA
QBC35366.1\|1399667_1401299_-	Na/Pi cotransporter family protein	A0A1B1ITU5	uncultured_Mediterranean_phage	2.7e-05	38.8
QBC35367.1\|1401500_1402223_+	hypothetical protein	NA	NA	NA	NA
QBC35368.1\|1402351_1403194_-	DegV domain-containing protein	A0A1X9I5J4	Streptococcus_phage	1.3e-91	61.9
QBC35369.1\|1403486_1404044_+	TetR/AcrR family transcriptional regulator	A0A1X9I6A2	Streptococcus_phage	4.2e-14	60.3
QBC35370.1\|1404079_1404904_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
QBC35856.1\|1404905_1405511_-	trimeric intracellular cation channel family protein	NA	NA	NA	NA
QBC35371.1\|1405719_1406697_-	tagatose 1,6-diphosphate aldolase	NA	NA	NA	NA
QBC35372.1\|1407195_1407612_-	galactose-6-phosphate isomerase	NA	NA	NA	NA
QBC35373.1\|1407626_1408052_-	galactose-6-phosphate isomerase subunit LacA	NA	NA	NA	NA
QBC35374.1\|1408130_1408307_+	transcriptional regulator	NA	NA	NA	NA
QBC35857.1\|1408309_1409758_-	PTS galactitol transporter subunit IIC	NA	NA	NA	NA
QBC35375.1\|1409786_1410092_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
QBC35376.1\|1410084_1410558_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
QBC35377.1\|1410794_1411565_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.1e-20	27.8
QBC35378.1\|1411591_1411702_-	copper-binding protein	NA	NA	NA	NA
QBC35379.1\|1411764_1411968_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
QBC35858.1\|1411981_1414183_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.4e-113	37.7
QBC35380.1\|1414212_1414647_-	CopY/TcrY family copper transport repressor	NA	NA	NA	NA
QBC35381.1\|1414818_1415808_+	alpha/beta hydrolase	NA	NA	NA	NA
QBC35382.1\|1415938_1416295_-	ribosome-binding factor A	NA	NA	NA	NA
QBC35383.1\|1416494_1419356_-	translation initiation factor IF-2	E3T4N3	Cafeteria_roenbergensis_virus	4.5e-19	25.2
QBC35384.1\|1419375_1419678_-	YlxQ-related RNA-binding protein	NA	NA	NA	NA
QBC35385.1\|1419670_1419967_-	YlxR family protein	NA	NA	NA	NA
QBC35386.1\|1419982_1421140_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
QBC35859.1\|1421314_1421791_-	ribosome maturation factor RimP	NA	NA	NA	NA
1421958:1421974	attL	NA	NA	NA	NA
QBC35387.1\|1422095_1422275_-	Paratox	A3F673	Streptococcus_phage	5.6e-21	83.1
QBC35388.1\|1422513_1423686_+	streptodornase	A7J2B8	Streptococcus_phage	4.7e-76	49.8
QBC35389.1\|1423801_1424998_-	CHAP domain-containing protein	Q938J4	Temperate_phage	6.1e-196	82.2
QBC35390.1\|1425124_1425310_-	hypothetical protein	Q938J5	Temperate_phage	9.5e-24	93.4
QBC35391.1\|1425306_1425606_-	hypothetical protein	Q938J6	Temperate_phage	3.5e-36	82.3
QBC35392.1\|1425616_1426237_-	hypothetical protein	A3F662	Streptococcus_phage	8.3e-80	88.8
QBC35393.1\|1426239_1426401_-	hypothetical protein	NA	NA	NA	NA
QBC35394.1\|1426409_1428317_-	hyaluronidase	Q938J9	Temperate_phage	1.3e-134	60.9
QBC35395.1\|1428327_1428963_-	hypothetical protein	A0A097PBF7	Streptococcus_pyogenes_phage	2.2e-75	67.6
QBC35396.1\|1428962_1430018_-	hyaluronoglucosaminidase	A3F657	Streptococcus_phage	1.2e-126	73.2
QBC35397.1\|1430014_1431997_-	peptidase	A7J2A7	Streptococcus_phage	0.0e+00	92.5
QBC35398.1\|1432006_1432849_-\|tail	phage tail protein	A7J2A6	Streptococcus_phage	8.5e-160	99.6
QBC35399.1\|1432860_1437243_-\|tail	phage tail protein	A7J2A5	Streptococcus_phage	3.2e-226	76.4
QBC35400.1\|1437257_1437491_-	hypothetical protein	A7J2A4	Streptococcus_phage	4.4e-34	100.0
QBC35401.1\|1437565_1438021_-	hypothetical protein	A7J2A3	Streptococcus_phage	8.3e-77	100.0
QBC35402.1\|1438074_1438674_-\|tail	phage major tail protein, TP901-1 family	A7J2A2	Streptococcus_phage	4.1e-92	98.9
QBC35403.1\|1438685_1439045_-	hypothetical protein	A7J2A1	Streptococcus_phage	6.8e-58	97.5
QBC35404.1\|1439048_1439393_-	HK97 gp10 family phage protein	A7J2A0	Streptococcus_phage	6.1e-56	99.1
QBC35405.1\|1439389_1439668_-	hypothetical protein	A7J299	Streptococcus_phage	4.2e-47	98.9
QBC35406.1\|1439678_1440035_-	hypothetical protein	A7J298	Streptococcus_phage	2.8e-56	97.5
QBC35407.1\|1440046_1440934_-\|capsid	phage capsid protein	A7J297	Streptococcus_phage	3.6e-161	99.7
QBC35408.1\|1440946_1441516_-	DUF4355 domain-containing protein	A7J296	Streptococcus_phage	2.6e-80	97.9
QBC35409.1\|1441671_1441938_-	hypothetical protein	A0A097PAR8	Streptococcus_pyogenes_phage	1.7e-34	88.6
QBC35410.1\|1441940_1442129_-	hypothetical protein	A7J294	Streptococcus_phage	1.4e-22	98.4
QBC35411.1\|1442159_1443605_-\|head	phage head morphogenesis protein	A7J293	Streptococcus_phage	3.4e-257	92.9
QBC35412.1\|1443564_1445097_-\|portal	phage portal protein	A7J292	Streptococcus_phage	1.3e-286	98.2
QBC35413.1\|1445112_1446390_-\|terminase	PBSX family phage terminase large subunit	A7J291	Streptococcus_phage	1.3e-241	97.6
QBC35414.1\|1446379_1446832_-\|terminase	terminase small subunit	A7J290	Streptococcus_phage	6.9e-76	100.0
QBC35415.1\|1446921_1447338_-	DUF722 domain-containing protein	A7J289	Streptococcus_phage	6.6e-73	100.0
QBC35416.1\|1447334_1447526_-	hypothetical protein	NA	NA	NA	NA
QBC35417.1\|1447515_1448367_-	site-specific DNA-methyltransferase	A0A1W6JMZ7	Lactococcus_phage	1.5e-100	71.9
QBC35418.1\|1448375_1448642_-	hypothetical protein	A7J287	Streptococcus_phage	5.4e-20	65.2
QBC35419.1\|1448806_1450129_-	DEAD/DEAH box helicase	A7J284	Streptococcus_phage	1.9e-254	98.4
QBC35420.1\|1450125_1450401_-	VRR-NUC domain-containing protein	A7J283	Streptococcus_phage	9.1e-47	100.0
QBC35421.1\|1450787_1453172_-	DNA primase	A7J282	Streptococcus_phage	5.3e-276	94.4
QBC35422.1\|1453176_1455099_-	DNA polymerase	A7J280	Streptococcus_phage	0.0e+00	96.7
QBC35423.1\|1455141_1455699_-	DUF2815 family protein	D2J040	Enterococcus_phage	2.5e-51	57.9
QBC35424.1\|1455709_1456108_-	hypothetical protein	NA	NA	NA	NA
QBC35425.1\|1456111_1457266_-	DUF2800 domain-containing protein	A7J278	Streptococcus_phage	4.5e-204	91.9
QBC35426.1\|1457265_1457565_-	hypothetical protein	A7J277	Streptococcus_phage	1.8e-43	100.0
QBC35427.1\|1457652_1457856_-	hypothetical protein	A7J276	Streptococcus_phage	2.3e-31	95.5
QBC35428.1\|1458002_1458389_-	hypothetical protein	A7J274	Streptococcus_phage	3.1e-56	88.2
QBC35429.1\|1458385_1458589_-	hypothetical protein	NA	NA	NA	NA
QBC35430.1\|1458581_1458752_-	hypothetical protein	A7J273	Streptococcus_phage	6.9e-21	89.3
QBC35431.1\|1458748_1459024_-	DNA-binding protein	A7J272	Streptococcus_phage	5.9e-46	95.6
QBC35432.1\|1459085_1459301_-	transcriptional regulator	M1Q1B4	Streptococcus_phage	4.2e-23	76.8
QBC35433.1\|1459348_1459762_+	hypothetical protein	NA	NA	NA	NA
QBC35434.1\|1460172_1460574_+	XRE family transcriptional regulator	A7J269	Streptococcus_phage	1.1e-40	72.9
QBC35435.1\|1460587_1460971_+	ImmA/IrrE family metallo-endopeptidase	A7J268	Streptococcus_phage	5.3e-69	99.2
QBC35436.1\|1460981_1461533_+	hypothetical protein	A7J267	Streptococcus_phage	3.4e-85	92.3
QBC35437.1\|1461649_1462729_+\|integrase	site-specific integrase	A7J266	Streptococcus_phage	1.3e-176	86.9
QBC35438.1\|1462926_1463562_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
1462775:1462791	attR	NA	NA	NA	NA
QBC35439.1\|1463561_1464353_-	aminoglycoside phosphotransferase	NA	NA	NA	NA
QBC35440.1\|1464416_1465451_-	ABC transporter permease	NA	NA	NA	NA
QBC35441.1\|1465453_1466179_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	3.9e-20	28.0

Anti-CRISPR protein detection

Acr_ID: CP031738.1|QBC35195.1|1204561_1204747_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

CP031738.1|QBC35195.1|1204561_1204747_-|hypothetical-protein

1204561_1204747_-

61 aa aa

1197844-1218369

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP031738_3	TypeI	3.2\|1276544\|35\|CP031738\|CRT	1276544-1276578	35	1203858-1203824	2

1. spacer 3.2|1276544|35|CP031738|CRT matches to CP031738 position: 1203858-1203824, mismatch: 2

ttgcaaaatttacgtgataactttaataaaataat	CRISPR spacer
ttgcaaaatttacgtgatgacttgaataaaataat	Protospacer
******************.**** ***********

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP031738

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information