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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP035911 Klebsiella pneumoniae strain BA4656 plasmid pColRNAI 0 crisprs NA 0 0 0 0
CP035909 Klebsiella pneumoniae strain BA4656 plasmid unnamed2, complete sequence 0 crisprs DEDDh 0 0 3 0
CP035906 Klebsiella pneumoniae strain BA4656 plasmid unnamed1, complete sequence 0 crisprs NA 0 0 1 0
CP035907 Klebsiella pneumoniae strain BA4656 plasmid pIncFIBpQil, complete sequence 0 crisprs RT 0 0 2 0
CP035905 Klebsiella pneumoniae strain BA4656 chromosome, complete genome 0 crisprs DEDDh,csa3,cas3,RT,DinG,cas2,cas1,cas7,cas6e,cse2gr11,cas8e 0 0 6 0
CP035908 Klebsiella pneumoniae strain BA4656 plasmid pIncAC2, complete sequence 0 crisprs DEDDh 0 0 1 0
CP035912 Klebsiella pneumoniae strain BA4656 plasmid pCol440II 0 crisprs NA 0 0 0 0
CP035910 Klebsiella pneumoniae strain BA4656 plasmid pIncX3 0 crisprs NA 0 0 0 0

Results visualization

1. CP035907
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 9171 : 67732 49 Enterobacteria_phage(15.38%) transposase,integrase attL 48509:48524|attR 74558:74573
DBSCAN-SWA_2 75629 : 84433 9 Enterobacteria_phage(28.57%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP035908
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 103860 : 128954 18 Salmonella_phage(27.27%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. CP035905
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 367787 : 419494 65 Enterobacteria_phage(18.87%) holin,coat,head,terminase NA
DBSCAN-SWA_2 599032 : 683972 95 Klebsiella_phage(56.9%) tRNA,portal,terminase,holin,protease,tail,capsid,head NA
DBSCAN-SWA_3 3742087 : 3751551 8 Dickeya_phage(16.67%) protease,tRNA NA
DBSCAN-SWA_4 4000522 : 4095234 98 Klebsiella_phage(48.78%) tRNA,portal,terminase,integrase,holin,head,tail,capsid,transposase attL 3992365:3992382|attR 4103751:4103768
DBSCAN-SWA_5 4662798 : 4669222 6 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_6 5155655 : 5241659 89 Salmonella_phage(13.56%) tRNA,plate,terminase,holin,head NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. CP035909
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 15163 16 Salmonella_phage(85.71%) NA NA
DBSCAN-SWA_2 18516 : 78215 62 Salmonella_phage(86.79%) terminase,integrase,capsid,tail attL 13485:13500|attR 23681:23696
DBSCAN-SWA_3 82159 : 108648 27 Salmonella_phage(84.62%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
5. CP035906
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 4476 : 60227 43 Bacillus_phage(17.39%) transposase,integrase attL 3347:3363|attR 43744:43760
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage