CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP035909	Klebsiella pneumoniae strain BA4656 plasmid unnamed2, complete sequence	0 crisprs	DEDDh	3
CP035905	Klebsiella pneumoniae strain BA4656 chromosome, complete genome	0 crisprs	DEDDh,csa3,cas3,RT,DinG,cas2,cas1,cas7,cas6e,cse2gr11,cas8e	6
CP035912	Klebsiella pneumoniae strain BA4656 plasmid pCol440II	0 crisprs	NA	0
CP035906	Klebsiella pneumoniae strain BA4656 plasmid unnamed1, complete sequence	0 crisprs	NA	1
CP035911	Klebsiella pneumoniae strain BA4656 plasmid pColRNAI	0 crisprs	NA	0
CP035907	Klebsiella pneumoniae strain BA4656 plasmid pIncFIBpQil, complete sequence	0 crisprs	RT	2
CP035908	Klebsiella pneumoniae strain BA4656 plasmid pIncAC2, complete sequence	0 crisprs	DEDDh	1
CP035910	Klebsiella pneumoniae strain BA4656 plasmid pIncX3	0 crisprs	NA	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 15163

Salmonella_phage(85.71%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBE75778.1\|0_1098_+	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	1.9e-74	52.9
QBE75779.1\|1549_1762_-	hypothetical protein	J9Q7S8	Salmonella_phage	4.3e-28	80.0
QBE75780.1\|1761_2097_-	hypothetical protein	J9Q7Z5	Salmonella_phage	1.0e-36	66.7
QBE75883.1\|2093_2273_-	hypothetical protein	NA	NA	NA	NA
QBE75781.1\|2806_5149_-	recombinase RecA	J9Q736	Salmonella_phage	3.3e-28	83.8
QBE75782.1\|5151_5418_-	hypothetical protein	J9Q7G8	Salmonella_phage	1.7e-34	84.1
QBE75783.1\|5417_6362_-	exonuclease	J9Q7S6	Salmonella_phage	2.8e-172	93.6
QBE75784.1\|6422_7430_-	regulator	J9Q7Z3	Salmonella_phage	3.1e-140	86.3
QBE75785.1\|7549_7981_-	hypothetical protein	J9Q6I8	Salmonella_phage	1.4e-65	91.6
QBE75786.1\|8128_8428_-	hypothetical protein	NA	NA	NA	NA
QBE75787.1\|8438_8858_-	hypothetical protein	A0A291AWZ9	Escherichia_phage	6.3e-47	62.6
QBE75788.1\|9058_9502_-	hypothetical protein	J9Q7S4	Salmonella_phage	2.0e-59	83.7
QBE75789.1\|9498_10668_-	uracil-DNA glycosylase	J9Q7Z2	Salmonella_phage	4.4e-207	92.3
QBE75790.1\|10689_11391_-	hypothetical protein	S5YLC4	Mycobacterium_phage	7.6e-21	37.6
QBE75791.1\|13724_13928_-	hypothetical protein	J9Q6I7	Salmonella_phage	3.3e-25	80.6
QBE75792.1\|13930_15163_-	porphyrin biosynthesis protein	J9Q733	Salmonella_phage	1.6e-212	86.6

DBSCAN-SWA_2

18516 : 78215

Salmonella_phage(86.79%)

terminase,integrase,capsid,tail

attL 13485:13500|attR 23681:23696

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
13485:13500	attL	NA	NA	NA	NA
QBE75795.1\|18516_19617_-\|integrase	integrase	A0A1P8DTG6	Proteus_phage	9.4e-18	30.0
QBE75796.1\|19967_20327_+	hypothetical protein	NA	NA	NA	NA
QBE75797.1\|20391_20802_-	toxin YafO	NA	NA	NA	NA
QBE75798.1\|20811_21429_-	hypothetical protein	NA	NA	NA	NA
QBE75799.1\|21523_21769_-	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	1.2e-13	47.4
QBE75800.1\|21765_22152_-	hypothetical protein	Q716B1	Shigella_phage	1.4e-45	71.2
QBE75801.1\|22161_22974_-	phosphate starvation-inducible protein PhoH	W8D063	Erwinia_phage	8.1e-91	66.1
QBE75802.1\|24247_24547_-	C-type natriuretic protein	J9Q7S1	Salmonella_phage	4.6e-28	65.3
23681:23696	attR	NA	NA	NA	NA
QBE75803.1\|24543_24696_-	hypothetical protein	J9Q7Z1	Salmonella_phage	1.6e-16	82.0
QBE75804.1\|24940_25408_-	hypothetical protein	J9Q7R9	Salmonella_phage	2.8e-48	62.7
QBE75805.1\|26395_27511_-	DNA primase	J9Q720	Salmonella_phage	2.8e-203	91.6
QBE75806.1\|27662_29003_-	DNA helicase	J9Q7G4	Salmonella_phage	5.4e-241	96.0
QBE75807.1\|29067_29793_-	hypothetical protein	J9Q7R8	Salmonella_phage	7.4e-128	88.4
QBE75808.1\|30086_31145_+	hypothetical protein	A0A2I7RNF6	Vibrio_phage	2.3e-61	42.2
QBE75809.1\|31204_31567_-	hypothetical protein	J9Q7G3	Salmonella_phage	1.5e-44	97.9
QBE75810.1\|31566_32232_-	plasmid stability protein	J9Q7R7	Salmonella_phage	2.9e-102	83.7
QBE75811.1\|32416_33166_-	hypothetical protein	J9Q7Y8	Salmonella_phage	1.6e-16	31.3
QBE75812.1\|33150_33543_-	hypothetical protein	A0A077SLR3	Escherichia_phage	1.0e-14	42.2
QBE75813.1\|33959_34211_-	hypothetical protein	J9Q7R6	Salmonella_phage	2.0e-24	73.5
QBE75814.1\|34213_34906_-	hypothetical protein	J9Q7Y7	Salmonella_phage	7.0e-120	89.6
QBE75815.1\|34919_35243_-	hypothetical protein	J9Q6E7	Salmonella_phage	2.3e-49	95.3
QBE75816.1\|35339_36866_-\|tail	tail fiber domain-containing protein	A0A0P0IDN1	Klebsiella_phage	4.5e-127	58.0
QBE75817.1\|48525_49137_-\|tail	tail assembly protein	J9Q7F8	Salmonella_phage	4.5e-78	73.9
QBE75818.1\|49124_49922_-\|tail	phage tail protein	J9Q7R4	Salmonella_phage	5.4e-140	85.3
QBE75819.1\|49914_50613_-\|tail	phage minor tail protein L	J9Q7Y5	Salmonella_phage	1.2e-122	87.4
QBE75820.1\|50699_51035_-\|tail	phage tail protein	J9Q6E1	Salmonella_phage	3.4e-51	84.5
QBE75821.1\|51078_55623_-\|tail	phage tail tape measure protein	J9Q712	Salmonella_phage	0.0e+00	67.5
QBE75884.1\|55630_55864_-	hypothetical protein	J9Q7F7	Salmonella_phage	3.4e-34	93.5
QBE75822.1\|55980_56298_-	hypothetical protein	J9Q7R3	Salmonella_phage	2.4e-46	92.4
QBE75823.1\|56359_57106_-	Ig domain-containing protein	J9Q7Y4	Salmonella_phage	3.7e-106	83.0
QBE75824.1\|57173_57566_-	hypothetical protein	J9Q6D8	Salmonella_phage	1.0e-46	67.5
QBE75825.1\|57567_58041_-	hypothetical protein	J9Q711	Salmonella_phage	1.9e-76	93.6
QBE75826.1\|58031_58376_-	hypothetical protein	J9Q7F6	Salmonella_phage	2.2e-53	92.1
QBE75827.1\|58473_59307_-	hypothetical protein	J9Q7R2	Salmonella_phage	4.8e-131	83.4
QBE75828.1\|59306_59741_-	hypothetical protein	J9Q7Y3	Salmonella_phage	2.9e-63	84.0
QBE75885.1\|59788_60217_-	Ig domain-containing protein	J9Q6D6	Salmonella_phage	6.0e-29	82.4
QBE75829.1\|60293_61172_-\|capsid	phage major capsid protein	J9Q710	Salmonella_phage	4.7e-153	94.2
QBE75830.1\|61198_62098_-	hypothetical protein	J9Q7F4	Salmonella_phage	1.0e-123	82.6
QBE75831.1\|62120_63710_-	hypothetical protein	J9Q7R1	Salmonella_phage	1.1e-274	88.5
QBE75832.1\|63727_64984_-\|terminase	terminase	J9Q7Y2	Salmonella_phage	9.4e-248	97.4
QBE75833.1\|64986_65628_-	DNA-binding protein	J9Q6D4	Salmonella_phage	5.0e-96	88.2
QBE75834.1\|65803_66070_-	hypothetical protein	J9Q757	Salmonella_phage	1.3e-37	90.9
QBE75835.1\|66079_66979_-	hypothetical protein	J9Q7I6	Salmonella_phage	2.7e-164	96.6
QBE75836.1\|66975_67230_-	hypothetical protein	J9Q7U0	Salmonella_phage	2.0e-40	96.4
QBE75837.1\|67222_67861_-	ATP-binding cassette domain-containing protein	J9Q807	Salmonella_phage	1.4e-109	97.6
QBE75838.1\|67857_68526_-	chromosome partitioning protein ParB	J9Q6L1	Salmonella_phage	1.9e-106	91.4
QBE75886.1\|68525_69206_-	chromosome partitioning protein ParB	J9Q756	Salmonella_phage	2.1e-108	89.3
QBE75839.1\|69289_70849_+	DEAD/DEAH box helicase	J9Q7I4	Salmonella_phage	1.2e-279	92.9
QBE75840.1\|70851_71130_+	hypothetical protein	J9Q7T9	Salmonella_phage	6.2e-27	70.3
QBE75841.1\|71191_71731_+	hypothetical protein	NA	NA	NA	NA
QBE75842.1\|71877_72369_+	hypothetical protein	NA	NA	NA	NA
QBE75843.1\|72502_72859_+	hypothetical protein	NA	NA	NA	NA
QBE75844.1\|72908_73439_+	transcriptional regulator	J9Q6L0	Salmonella_phage	2.5e-56	69.6
QBE75845.1\|73755_74406_+	hypothetical protein	J9Q754	Salmonella_phage	1.9e-106	91.7
QBE75846.1\|74453_74684_+	hypothetical protein	NA	NA	NA	NA
QBE75847.1\|75321_75804_-	hypothetical protein	J9Q805	Salmonella_phage	1.4e-63	70.0
QBE75848.1\|76009_76291_-	ABC transporter	J9Q753	Salmonella_phage	2.4e-42	84.9
QBE75849.1\|76293_76668_-	hypothetical protein	NA	NA	NA	NA
QBE75850.1\|76796_77204_-	hypothetical protein	NA	NA	NA	NA
QBE75851.1\|77323_77635_-	hypothetical protein	J9Q7T7	Salmonella_phage	3.6e-31	68.0
QBE75852.1\|77771_77984_-	hypothetical protein	J9Q804	Salmonella_phage	1.3e-24	76.5
QBE75853.1\|77996_78215_-	hypothetical protein	J9Q6K7	Salmonella_phage	2.9e-27	81.9

DBSCAN-SWA_3

82159 : 108648

Salmonella_phage(84.62%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBE75856.1\|82159_83716_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	1.9e-104	43.5
QBE75857.1\|85055_88172_+	HsdR family type I site-specific deoxyribonuclease	A0A220A398	Liberibacter_phage	7.8e-25	23.8
QBE75858.1\|88232_88448_-	DNA modification methylase	J9Q747	Salmonella_phage	1.2e-14	69.8
QBE75859.1\|88576_89155_-	hypothetical protein	J9Q7H6	Salmonella_phage	3.0e-55	57.0
QBE75860.1\|89282_89438_-	DUF3927 domain-containing protein	H6WZJ7	Escherichia_phage	1.7e-05	61.2
QBE75861.1\|89437_89863_-	tellurite/colicin resistance protein	Q71TK7	Escherichia_phage	7.5e-56	80.9
QBE75862.1\|89965_90154_-	hypothetical protein	J9Q800	Salmonella_phage	3.3e-08	52.5
QBE75863.1\|90150_90429_-	hypothetical protein	NA	NA	NA	NA
QBE75864.1\|90849_91458_-	ribonuclease HI	J9Q745	Salmonella_phage	1.5e-110	93.1
QBE75865.1\|92047_92281_-	hypothetical protein	J9Q7H5	Salmonella_phage	9.2e-32	85.5
QBE75866.1\|92483_93077_-	phage N-6-adenine-methyltransferase	J9Q7T2	Salmonella_phage	1.2e-107	95.4
QBE75867.1\|93261_94095_-	hypothetical protein	J9Q7Z9	Salmonella_phage	1.1e-63	56.4
QBE75868.1\|94220_94775_-	3'-5' exonuclease	J9Q6J8	Salmonella_phage	1.1e-80	78.7
QBE75869.1\|94784_95204_-	hypothetical protein	J9Q743	Salmonella_phage	5.5e-51	73.4
QBE75870.1\|95266_95911_-	hypothetical protein	J9Q7H4	Salmonella_phage	4.7e-94	77.6
QBE75871.1\|95910_96387_-	dihydrofolate reductase	J9Q7T1	Salmonella_phage	4.9e-72	79.6
QBE75872.1\|96383_96797_-	hypothetical protein	J9Q7Z8	Salmonella_phage	8.1e-55	77.4
QBE75873.1\|96798_97902_-	thymidylate synthase	J9Q6J6	Salmonella_phage	6.7e-181	80.1
QBE75874.1\|98095_98971_-	phosphoribosyl-ATP pyrophosphohydrolase	J9Q742	Salmonella_phage	3.1e-141	85.4
QBE75875.1\|99048_100191_-	ribonucleotide-diphosphate reductase subunit beta	J9Q7H3	Salmonella_phage	9.0e-213	95.8
QBE75876.1\|100321_102625_-	ribonucleoside-diphosphate reductase subunit alpha	J9Q7T0	Salmonella_phage	0.0e+00	91.1
QBE75877.1\|102699_103269_-	hypothetical protein	J9Q7Z7	Salmonella_phage	2.4e-94	89.9
QBE75878.1\|103278_104025_-	hypothetical protein	J9Q6J5	Salmonella_phage	2.9e-79	61.7
QBE75879.1\|104014_105931_-	exonuclease	J9Q741	Salmonella_phage	1.2e-299	84.8
QBE75880.1\|105927_106161_-	hypothetical protein	J9Q7H1	Salmonella_phage	4.4e-18	66.1
QBE75881.1\|107433_107928_-	N-acetyltransferase	J9Q6J3	Salmonella_phage	1.0e-59	67.1
QBE75882.1\|108003_108648_-	hypothetical protein	J9Q739	Salmonella_phage	4.9e-99	80.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP035905

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

367787 : 419494

Enterobacteria_phage(18.87%)

holin,coat,head,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBE70706.1\|367787_368717_+	hypothetical protein	E7DYY8	Enterobacteria_phage	6.7e-134	81.4
QBE70707.1\|369041_370202_+	DUF4102 domain-containing protein	Q716F9	Shigella_phage	1.8e-192	85.3
QBE70708.1\|370376_370694_-	hypothetical protein	K7PGV5	Enterobacterial_phage	4.0e-22	51.5
QBE70709.1\|370693_370933_-	hypothetical protein	K7P7N3	Enterobacteria_phage	1.1e-16	53.2
QBE70710.1\|371082_373536_-	hypothetical protein	A0A1I9SEN3	Klebsiella_phage	8.8e-48	30.1
QBE70711.1\|373622_376100_-	MoaD/ThiS family protein	F1C5A7	Cronobacter_phage	9.4e-199	45.6
QBE70712.1\|376086_376482_-	hypothetical protein	F1C5F2	Cronobacter_phage	3.0e-35	52.8
QBE70713.1\|376478_376949_-	hypothetical protein	R9TPR6	Aeromonas_phage	1.6e-27	40.4
QBE75029.1\|376948_377368_-	hypothetical protein	A0A2P1MXB5	Escherichia_phage	5.9e-29	47.1
QBE70714.1\|377551_377821_+	DUF1883 domain-containing protein	NA	NA	NA	NA
QBE70715.1\|377797_377977_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
QBE70716.1\|378017_381458_-	hypothetical protein	Q5G8W8	Enterobacteria_phage	9.8e-154	47.3
QBE70717.1\|381518_382040_-	hypothetical protein	NA	NA	NA	NA
QBE70718.1\|382119_382593_-	DUF2335 domain-containing protein	NA	NA	NA	NA
QBE70719.1\|382564_382759_-	hypothetical protein	NA	NA	NA	NA
QBE70720.1\|383641_384319_-	hypothetical protein	F1C5E8	Cronobacter_phage	3.3e-74	58.8
QBE70721.1\|384374_385124_-	Ig domain-containing protein	G0ZNE6	Cronobacter_phage	1.4e-44	42.8
QBE70722.1\|385192_385585_-	hypothetical protein	G0ZNE4	Cronobacter_phage	3.9e-35	52.7
QBE70723.1\|385581_386007_-	HK97 gp10 family phage protein	R9TPP7	Aeromonas_phage	5.1e-28	47.9
QBE70724.1\|386009_386372_-	hypothetical protein	A0A0M3LSC9	Mannheimia_phage	9.6e-20	48.3
QBE70725.1\|386371_386545_-	50S ribosomal protein L13	I6R0P9	Salmonella_phage	4.1e-13	54.4
QBE70726.1\|386544_386925_-	hypothetical protein	F1C5E2	Cronobacter_phage	4.1e-29	55.3
QBE70727.1\|386927_387230_-	hypothetical protein	NA	NA	NA	NA
QBE70728.1\|387261_388317_-\|coat	phage coat protein	A0A1W6DYD5	Salmonella_phage	4.5e-102	53.8
QBE70729.1\|388313_388775_-	hypothetical protein	B1GS72	Salmonella_phage	3.8e-29	50.3
QBE70730.1\|388774_390130_-	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	4.6e-131	53.5
QBE70731.1\|390207_390408_+	hypothetical protein	NA	NA	NA	NA
QBE70732.1\|390400_391402_-\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	1.5e-115	69.3
QBE70733.1\|391328_392798_-	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	1.4e-146	55.5
QBE70734.1\|392810_394283_-\|terminase	terminase	A0A1W6JNY3	Morganella_phage	1.0e-248	82.3
QBE70735.1\|394282_394798_-	hypothetical protein	A0A0H5AUE2	Pseudomonas_phage	2.0e-50	62.4
QBE75030.1\|395490_395796_-\|holin	holin	A0A286N2Q5	Klebsiella_phage	8.6e-46	97.9
QBE70736.1\|395914_396454_-	HNH endonuclease	D6PIK0	uncultured_phage	6.2e-23	39.8
QBE70737.1\|397134_397824_-	antiterminator	I6PDF8	Cronobacter_phage	5.3e-59	54.9
QBE70738.1\|397820_397961_-	YlcG family protein	NA	NA	NA	NA
QBE70739.1\|397957_398188_-	hypothetical protein	NA	NA	NA	NA
QBE70740.1\|398757_398928_-	hypothetical protein	G8C7V4	Escherichia_phage	5.7e-15	73.2
QBE70741.1\|398927_399383_-	hypothetical protein	K7P7B8	Enterobacteria_phage	7.0e-52	66.2
QBE70742.1\|402055_402820_-	hypothetical protein	A5LH60	Enterobacteria_phage	2.0e-06	46.6
QBE70743.1\|402816_403218_-	chromosome partitioning protein ParB	S4TTI6	Salmonella_phage	3.5e-55	78.0
QBE70744.1\|403214_403634_-	hypothetical protein	T1SBJ7	Salmonella_phage	5.9e-21	55.6
QBE75031.1\|403630_403930_-	protein ren	M1FPD5	Enterobacteria_phage	4.4e-18	54.7
QBE70745.1\|403934_405308_-	replicative DNA helicase	E5AGF0	Erwinia_phage	4.0e-167	64.2
QBE70746.1\|405304_406390_-	DNA replication protein	E5AGE9	Erwinia_phage	5.7e-84	45.6
QBE70747.1\|406563_406848_-	hypothetical protein	K7PHN8	Enterobacterial_phage	8.1e-22	57.4
QBE70748.1\|406887_407121_-	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	3.0e-22	70.4
QBE70749.1\|407225_407915_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.0e-86	70.6
QBE70750.1\|408116_408470_+	hypothetical protein	NA	NA	NA	NA
QBE70751.1\|408666_408870_-	hypothetical protein	A0A192Y6Q5	Salmonella_phage	5.9e-19	71.6
QBE75032.1\|409444_409720_+	hypothetical protein	A0A2D1GLY1	Escherichia_phage	1.8e-26	64.8
QBE70752.1\|409851_410067_+	hypothetical protein	B5WZV1	Pseudomonas_phage	3.7e-11	50.0
QBE70753.1\|410166_410361_+	hypothetical protein	NA	NA	NA	NA
QBE70754.1\|410449_410734_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	2.3e-29	61.7
QBE70755.1\|410743_411661_+	recombinase RecT	M9NZA6	Enterobacteria_phage	8.1e-164	94.4
QBE70756.1\|411657_412338_+	exonuclease	A0A0M3ULE0	Salmonella_phage	1.2e-124	92.9
QBE75033.1\|412334_412763_+	regulator	M9NYX4	Enterobacteria_phage	1.3e-63	80.3
QBE70757.1\|412759_413416_+	DNA methyltransferase	G8C7S6	Escherichia_phage	3.5e-113	87.5
QBE70758.1\|413412_414630_+	DNA cytosine methyltransferase	Q858D4	Salmonella_phage	5.9e-146	68.0
QBE70759.1\|414577_414796_+	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	4.6e-09	45.8
QBE75034.1\|415187_415676_+	AP2/ERF family transcription factor	A0A2I7R856	Vibrio_phage	7.6e-28	57.6
QBE70760.1\|415716_415917_+	excisionase	K7P7V0	Enterobacteria_phage	3.7e-29	86.4
QBE70761.1\|416253_416736_+	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
QBE70762.1\|417103_417985_+	hypothetical protein	A0A2H4JEC4	uncultured_Caudovirales_phage	1.5e-05	56.8
QBE70763.1\|417994_418903_-	transcriptional regulator CynR	A0A2P0ZL89	Lactobacillus_phage	4.6e-10	24.2
QBE70764.1\|419035_419494_+	nucleoside deaminase	A0A0B5J096	Pandoravirus	1.6e-11	32.3

DBSCAN-SWA_2

599032 : 683972

Klebsiella_phage(56.9%)

tRNA,portal,terminase,holin,protease,tail,capsid,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBE70914.1\|599032_599770_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
QBE70915.1\|599901_601233_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	6.2e-48	31.9
QBE70916.1\|601278_601662_-	autonomous glycyl radical cofactor GrcA	A0A193GZ98	Escherichia_phage	4.0e-32	79.3
QBE70917.1\|601974_602664_+	uracil-DNA glycosylase	A0A077BCN4	Equid_alphaherpesvirus	1.3e-57	53.0
QBE70918.1\|602721_603807_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
QBE70919.1\|604010_604436_+	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	6.0e-13	40.2
QBE70920.1\|604505_605204_+	DTW domain-containing protein	NA	NA	NA	NA
QBE75039.1\|608009_609365_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
QBE70921.1\|609405_609729_+	YfiM family lipoprotein	NA	NA	NA	NA
QBE70922.1\|609732_611031_-	MFS transporter	Q6JIH2	Burkholderia_virus	4.1e-44	31.5
QBE70923.1\|617014_619588_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	6.9e-128	35.4
QBE70924.1\|619717_620449_-	polyphenol oxidase	NA	NA	NA	NA
QBE70925.1\|620445_621426_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
QBE70926.1\|621557_622295_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
QBE70927.1\|622565_622901_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
QBE75040.1\|623007_623055_+	hypothetical protein	NA	NA	NA	NA
QBE70928.1\|623154_624315_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
QBE70929.1\|624311_625184_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
QBE70930.1\|625247_626369_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
QBE70931.1\|626378_627449_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	1.8e-90	51.5
QBE70932.1\|627791_628301_+	YfiR family protein	NA	NA	NA	NA
QBE70933.1\|628293_629517_+	diguanylate cyclase DgcN	NA	NA	NA	NA
QBE70934.1\|629530_630013_+	OmpA family protein	NA	NA	NA	NA
QBE70935.1\|631447_631906_-	DUF2946 domain-containing protein	NA	NA	NA	NA
QBE70936.1\|632026_632374_-	50S ribosomal protein L19	NA	NA	NA	NA
QBE70937.1\|632413_633181_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
QBE75041.1\|633212_633761_-	ribosome maturation factor RimM	NA	NA	NA	NA
QBE70938.1\|633779_634028_-	30S ribosomal protein S16	NA	NA	NA	NA
QBE70939.1\|634287_635652_-	signal recognition particle protein	NA	NA	NA	NA
QBE70940.1\|635815_636607_+	inner membrane protein YpjD	NA	NA	NA	NA
QBE70941.1\|636626_637913_+	DUF21 domain-containing protein	NA	NA	NA	NA
QBE70942.1\|638032_638623_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
QBE70943.1\|638747_639626_+	NAD(+) kinase	NA	NA	NA	NA
QBE70944.1\|639712_641374_+	DNA repair protein RecN	NA	NA	NA	NA
QBE70945.1\|641521_641863_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
QBE70946.1\|641929_642220_-	RnfH family protein	NA	NA	NA	NA
QBE70947.1\|642209_642686_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
QBE70948.1\|642796_643279_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
QBE70949.1\|644056_644305_+	DinI family protein	S5MQI1	Escherichia_phage	3.6e-26	70.4
QBE75042.1\|644712_645135_-	hypothetical protein	K7P834	Enterobacteria_phage	2.8e-26	45.3
QBE70950.1\|645211_645760_-	recombinase family protein	A0A286S1P7	Klebsiella_phage	3.0e-89	94.5
QBE75043.1\|645873_649008_+	SGNH/GDSL hydrolase family protein	A0A1I9SEN3	Klebsiella_phage	4.2e-103	32.0
QBE70951.1\|649098_649857_-	hypothetical protein	NA	NA	NA	NA
QBE70952.1\|649859_651611_-	GDSL family lipase	A0A286S1P0	Klebsiella_phage	1.7e-24	54.1
QBE70953.1\|654761_655148_-	nitrite transporter	A0A286S2A6	Klebsiella_phage	4.7e-33	50.8
QBE70954.1\|655155_655638_-	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	8.5e-56	67.7
QBE70955.1\|655624_656104_-	hypothetical protein	A0A286S298	Klebsiella_phage	1.9e-76	78.6
QBE70956.1\|656103_658539_-\|tail	phage tail tape measure protein	A0A286S1S3	Klebsiella_phage	0.0e+00	87.9
QBE70957.1\|658608_659001_-	hypothetical protein	A0A286S1N7	Klebsiella_phage	3.6e-20	42.2
QBE70958.1\|659064_659328_-\|tail	phage tail protein	A0A286S1P2	Klebsiella_phage	1.8e-39	90.8
QBE70959.1\|659330_659714_-\|tail	phage tail protein	A0A286S1N4	Klebsiella_phage	1.4e-53	86.3
QBE70960.1\|659757_660249_-\|tail	phage tail protein	A0A286S1Q8	Klebsiella_phage	2.3e-88	100.0
QBE70961.1\|660305_660671_-	DUF3168 domain-containing protein	A0A286S1R1	Klebsiella_phage	8.4e-64	95.9
QBE70962.1\|660667_661207_-	HK97 gp10 family phage protein	A0A286S249	Klebsiella_phage	6.7e-94	99.4
QBE70963.1\|661199_661532_-\|head,tail	head-tail adaptor protein	A0A286S2A2	Klebsiella_phage	3.1e-57	100.0
QBE70964.1\|661533_661731_-	hypothetical protein	A0A286S2A5	Klebsiella_phage	1.7e-26	100.0
QBE70965.1\|661791_662118_-\|head,tail	phage gp6-like head-tail connector protein	A0A286S294	Klebsiella_phage	7.5e-56	100.0
QBE70966.1\|662065_662308_-	hypothetical protein	NA	NA	NA	NA
QBE70967.1\|662344_663508_-\|capsid	phage major capsid protein	A0A286S1R4	Klebsiella_phage	2.9e-211	99.2
QBE70968.1\|663519_664200_-\|head,protease	HK97 family phage prohead protease	A0A286S1N1	Klebsiella_phage	3.5e-124	99.6
QBE70969.1\|664205_665483_-\|portal	phage portal protein	A0A286S1N5	Klebsiella_phage	8.1e-247	99.8
QBE70970.1\|665485_667018_-\|terminase	terminase	A0A286S1M9	Klebsiella_phage	1.5e-295	99.8
QBE70971.1\|667027_667462_-	hypothetical protein	A0A286S1P9	Klebsiella_phage	1.8e-73	99.3
QBE70972.1\|667583_667793_-	serine acetyltransferase	A0A286N2R4	Klebsiella_phage	1.4e-23	82.6
QBE75044.1\|667805_668096_-	HNH endonuclease	A0A286N2R3	Klebsiella_phage	7.6e-52	95.8
QBE70973.1\|668167_668653_-	hypothetical protein	NA	NA	NA	NA
QBE70974.1\|668771_669017_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	1.4e-35	98.8
QBE70975.1\|669083_669473_-	hypothetical protein	Q1MVJ1	Enterobacteria_phage	8.7e-27	48.4
QBE70976.1\|669557_670046_-	hypothetical protein	NA	NA	NA	NA
QBE75045.1\|670116_670314_-	hypothetical protein	A0A286SGR9	Klebsiella_phage	7.8e-24	86.9
QBE70977.1\|670264_670540_-	hypothetical protein	G8C7W1	Escherichia_phage	7.6e-09	42.0
QBE70978.1\|670547_671177_-	glycoside hydrolase family 19 protein	G8C7W0	Escherichia_phage	2.4e-103	88.5
QBE70979.1\|671176_671455_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	4.0e-34	76.1
QBE70980.1\|671444_671837_-	hypothetical protein	K7PHB9	Enterobacterial_phage	4.6e-44	72.2
QBE70981.1\|672088_672637_-	hypothetical protein	NA	NA	NA	NA
QBE70982.1\|672856_673639_-	antitermination protein	A0A286N2Q2	Klebsiella_phage	9.0e-148	100.0
QBE70983.1\|673635_674004_-	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	1.2e-36	59.5
QBE70984.1\|673990_675370_-	replicative DNA helicase	Q8W640	Enterobacteria_phage	1.3e-160	65.0
QBE70985.1\|675366_676245_-	cell division protein ZapE	Q8W641	Enterobacteria_phage	4.9e-86	63.5
QBE70986.1\|676256_677021_-	helix-turn-helix domain-containing protein	Q8HA96	Salmonella_phage	4.6e-72	61.1
QBE70987.1\|677017_677206_-	DUF4222 domain-containing protein	NA	NA	NA	NA
QBE70988.1\|677281_677509_-	helix-turn-helix domain-containing protein	A0A0N7C1T6	Escherichia_phage	1.5e-15	60.0
QBE70989.1\|677633_678341_+	helix-turn-helix transcriptional regulator	G8C7U1	Escherichia_phage	6.9e-54	50.2
QBE70990.1\|678500_678809_+	hypothetical protein	A0A286S1T9	Klebsiella_phage	3.9e-22	56.3
QBE70991.1\|678798_678993_+	hypothetical protein	A0A286S1P8	Klebsiella_phage	4.5e-08	50.0
QBE70992.1\|679163_679388_+	hypothetical protein	NA	NA	NA	NA
QBE70993.1\|679388_679754_+	hypothetical protein	A0A286S1Q6	Klebsiella_phage	5.8e-57	97.5
QBE70994.1\|679746_680001_+	hypothetical protein	A0A286SGR4	Klebsiella_phage	5.9e-40	96.4
QBE70995.1\|679972_680191_+	hypothetical protein	A0A286S1P6	Klebsiella_phage	2.5e-31	97.2
QBE70996.1\|680187_680628_+	hypothetical protein	A0A286S1S2	Klebsiella_phage	8.6e-63	83.6
QBE70997.1\|680668_681187_+	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.9e-93	98.3
QBE70998.1\|681305_681518_+	excisionase	I6PBM8	Cronobacter_phage	1.2e-25	76.1
QBE70999.1\|681472_682651_+	DUF3596 domain-containing protein	I6PDJ1	Cronobacter_phage	1.1e-205	91.3
QBE71000.1\|682901_683150_+	hypothetical protein	I6PCV4	Cronobacter_phage	1.6e-29	85.4
QBE71001.1\|683153_683972_+	hypothetical protein	I6PD67	Cronobacter_phage	2.5e-140	90.4

DBSCAN-SWA_3

3742087 : 3751551

Dickeya_phage(16.67%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBE73605.1\|3742087_3743203_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
QBE73606.1\|3743199_3745140_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
QBE73607.1\|3745216_3745438_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
QBE73608.1\|3745763_3746081_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
QBE73609.1\|3746111_3748391_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
QBE73610.1\|3748511_3748730_-	translation initiation factor IF-1	NA	NA	NA	NA
QBE73611.1\|3749083_3749785_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
QBE73612.1\|3749829_3751551_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.2e-14	34.8

DBSCAN-SWA_4

4000522 : 4095234

Klebsiella_phage(48.78%)

tRNA,portal,terminase,integrase,holin,head,tail,capsid,transposase

attL 3992365:3992382|attR 4103751:4103768

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3992365:3992382	attL	NA	NA	NA	NA
QBE73814.1\|4000522_4001014_+\|transposase	transposase	NA	NA	NA	NA
QBE73815.1\|4001151_4002273_-	cupin domain-containing protein	NA	NA	NA	NA
QBE73816.1\|4002358_4003825_-	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
QBE73817.1\|4003824_4004496_-	two-component system response regulator PhoP	NA	NA	NA	NA
QBE73818.1\|4004775_4005582_+	AraC family transcriptional regulator	NA	NA	NA	NA
QBE73819.1\|4005665_4006028_+	cupin domain-containing protein	NA	NA	NA	NA
QBE73820.1\|4006082_4007453_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.2e-107	45.3
QBE73821.1\|4007456_4008098_-	lysogenization regulator HflD	NA	NA	NA	NA
QBE75188.1\|4008152_4009259_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
QBE73822.1\|4009315_4009774_-	NUDIX hydrolase	NA	NA	NA	NA
QBE73823.1\|4009791_4010442_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
QBE73824.1\|4010682_4011933_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
QBE73825.1\|4012050_4013178_-\|integrase	integrase	O21925	Phage_21	3.3e-119	58.4
QBE73826.1\|4013158_4013404_-	excisionase	NA	NA	NA	NA
QBE73827.1\|4013456_4015595_-	exonuclease	S4TNL0	Salmonella_phage	3.3e-99	42.9
QBE73828.1\|4015736_4016081_-	transcriptional regulator	NA	NA	NA	NA
QBE73829.1\|4016123_4016318_-	DUF1482 family protein	NA	NA	NA	NA
QBE73830.1\|4016327_4016546_-	hypothetical protein	NA	NA	NA	NA
QBE73831.1\|4017157_4017547_-	helix-turn-helix domain-containing protein	A0A0M4R5D1	Salmonella_phage	6.7e-35	60.2
QBE73832.1\|4017648_4017864_+	Rha family transcriptional regulator	A0A0M4QX15	Salmonella_phage	2.0e-17	57.5
QBE73833.1\|4017866_4018421_+	hypothetical protein	NA	NA	NA	NA
QBE73834.1\|4018472_4019456_+	hypothetical protein	A0A0U2RT81	Escherichia_phage	3.3e-46	56.4
QBE73835.1\|4019448_4019913_+	replication protein	A0A0U2JGJ0	Escherichia_phage	1.9e-60	68.9
QBE73836.1\|4019926_4020367_+	PerC family transcriptional regulator	NA	NA	NA	NA
QBE73837.1\|4020679_4022443_+	EAL domain-containing protein	NA	NA	NA	NA
QBE73838.1\|4022786_4024148_-	hypothetical protein	NA	NA	NA	NA
QBE73839.1\|4024802_4025036_+	DinI family protein	K7PM44	Enterobacteria_phage	1.7e-25	71.1
QBE73840.1\|4025047_4025338_+	hypothetical protein	H6WRY6	Salmonella_phage	6.1e-17	56.9
QBE73841.1\|4025378_4025771_+	DNA-binding protein	K7PHB4	Enterobacterial_phage	6.1e-12	36.6
QBE73842.1\|4025767_4025971_+	hypothetical protein	NA	NA	NA	NA
QBE73843.1\|4025970_4027002_+	DUF968 domain-containing protein	S5MW46	Escherichia_phage	1.8e-95	49.3
QBE73844.1\|4027014_4027359_+	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	1.0e-55	85.0
QBE75189.1\|4028262_4028703_-	hypothetical protein	NA	NA	NA	NA
QBE73845.1\|4029714_4029930_+\|holin	holin	A5LH82	Enterobacteria_phage	1.0e-29	87.3
QBE73846.1\|4029929_4030427_+	lysozyme	A0A1V0E5Q7	Salmonella_phage	4.3e-79	86.4
QBE73847.1\|4030423_4030774_+	hypothetical protein	A0A0K2FIW3	Enterobacter_phage	6.0e-11	37.7
QBE73848.1\|4031722_4032160_+	hypothetical protein	NA	NA	NA	NA
QBE73849.1\|4032198_4032423_-	hypothetical protein	NA	NA	NA	NA
QBE73850.1\|4032749_4033112_+	HNH endonuclease	Q6UAS2	Klebsiella_phage	1.3e-56	82.5
QBE73851.1\|4033063_4033387_+	hypothetical protein	NA	NA	NA	NA
QBE73852.1\|4033383_4033815_+	hypothetical protein	Q6UAS0	Klebsiella_phage	1.8e-41	61.6
QBE73853.1\|4034063_4034498_+\|terminase	phage terminase small subunit P27 family	A0A1J0GV10	Halomonas_phage	9.4e-30	61.9
QBE73854.1\|4034497_4036219_+\|terminase	terminase large subunit	Q7Y413	Yersinia_phage	1.1e-190	57.4
QBE73855.1\|4036212_4036392_+	hypothetical protein	Q6UAX9	Klebsiella_phage	4.0e-11	57.6
QBE73856.1\|4036391_4037651_+\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	2.8e-223	90.2
QBE73857.1\|4037687_4038608_+	S49 family peptidase	Q6UAX7	Klebsiella_phage	9.6e-149	88.2
QBE73858.1\|4038685_4039972_+\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	4.4e-216	89.3
QBE73859.1\|4040030_4040291_+	hypothetical protein	Q6UAX5	Klebsiella_phage	1.5e-22	63.9
QBE73860.1\|4040271_4040589_+\|head,tail	phage gp6-like head-tail connector protein	Q6UAX4	Klebsiella_phage	2.6e-45	88.8
QBE73861.1\|4040585_4040924_+\|head,tail	head-tail adaptor protein	Q6UAX3	Klebsiella_phage	5.6e-54	91.1
QBE73862.1\|4040904_4041294_+	hypothetical protein	Q6UAX2	Klebsiella_phage	1.1e-56	85.3
QBE73863.1\|4041290_4041692_+	hypothetical protein	Q6UAX1	Klebsiella_phage	1.7e-62	94.0
QBE73864.1\|4041723_4042185_+\|tail	phage tail protein	Q6UAX0	Klebsiella_phage	7.8e-67	83.7
QBE73865.1\|4042242_4042608_+\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	1.6e-51	89.3
QBE75190.1\|4042628_4042841_+	hypothetical protein	Q6UAW9	Klebsiella_phage	4.1e-31	87.5
QBE73866.1\|4042840_4046176_+\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	87.6
QBE73867.1\|4046175_4046514_+\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	8.3e-58	89.3
QBE73868.1\|4046510_4047266_+\|tail	phage minor tail protein L	Q6UAW5	Klebsiella_phage	1.2e-125	81.3
QBE73869.1\|4047267_4047978_+	peptidase P60	Q6UAW4	Klebsiella_phage	1.4e-136	89.8
QBE73870.1\|4048009_4048360_+	hypothetical protein	NA	NA	NA	NA
QBE73871.1\|4048375_4048987_+\|tail	tail assembly protein	Q6UAW2	Klebsiella_phage	5.3e-71	72.5
QBE73872.1\|4061821_4063249_+\|tail	tail fiber domain-containing protein	A0A0P0IDN1	Klebsiella_phage	3.0e-101	55.5
QBE73873.1\|4065783_4066107_+	hypothetical protein	NA	NA	NA	NA
QBE73874.1\|4066426_4066579_+	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-18	92.0
QBE73875.1\|4066851_4067565_-	ArsR family transcriptional regulator	NA	NA	NA	NA
QBE73876.1\|4067561_4067954_-	amino acid-binding protein	NA	NA	NA	NA
QBE73877.1\|4067946_4068270_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
QBE73878.1\|4068513_4068699_+	hypothetical protein	NA	NA	NA	NA
QBE73879.1\|4068719_4068947_-	DUF1272 domain-containing protein	NA	NA	NA	NA
QBE73880.1\|4069059_4070253_-	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA
QBE73881.1\|4070875_4071061_+	stress-induced acidophilic repeat motif-containing protein	NA	NA	NA	NA
QBE73882.1\|4071151_4071646_+	ferritin-like domain-containing protein	NA	NA	NA	NA
QBE73883.1\|4071672_4072179_+	ferritin-like domain-containing protein	NA	NA	NA	NA
QBE73884.1\|4072195_4073083_+	manganese catalase family protein	NA	NA	NA	NA
QBE73885.1\|4073138_4074545_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
QBE73886.1\|4074541_4075552_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
QBE73887.1\|4075667_4075865_-	hypothetical protein	NA	NA	NA	NA
QBE73888.1\|4076430_4077063_+	DNA-binding protein	NA	NA	NA	NA
QBE73889.1\|4077102_4077282_+	hypothetical protein	NA	NA	NA	NA
QBE73890.1\|4077679_4078366_+	EAL domain-containing protein	NA	NA	NA	NA
QBE73891.1\|4078676_4080185_-	UbiD family decarboxylase	NA	NA	NA	NA
QBE73892.1\|4080305_4081196_+	LysR family transcriptional regulator	NA	NA	NA	NA
QBE73893.1\|4081202_4082987_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-17	36.1
QBE73894.1\|4083060_4084269_-	HD domain-containing protein	NA	NA	NA	NA
QBE73895.1\|4084571_4085615_+	type II asparaginase	NA	NA	NA	NA
QBE73896.1\|4085869_4086061_-	hypothetical protein	NA	NA	NA	NA
QBE73897.1\|4087279_4087918_+	leucine efflux protein LeuE	NA	NA	NA	NA
QBE73898.1\|4088048_4088312_+	DUF2534 family protein	NA	NA	NA	NA
QBE73899.1\|4088371_4088497_-	hypothetical protein	NA	NA	NA	NA
QBE75191.1\|4088614_4088689_-	protein YoaJ	NA	NA	NA	NA
QBE73900.1\|4088688_4088790_-	hypothetical protein	NA	NA	NA	NA
QBE73901.1\|4088847_4089861_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.9e-12	29.0
QBE73902.1\|4090161_4090401_+	DUF333 domain-containing protein	NA	NA	NA	NA
QBE75192.1\|4090390_4090747_-	DUF488 domain-containing protein	NA	NA	NA	NA
QBE73903.1\|4090733_4091243_-	DUF523 domain-containing protein	NA	NA	NA	NA
QBE73904.1\|4091388_4092081_+	hypothetical protein	NA	NA	NA	NA
QBE73905.1\|4094170_4094617_-	DUF441 domain-containing protein	NA	NA	NA	NA
QBE73906.1\|4094733_4095234_-\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
4103751:4103768	attR	NA	NA	NA	NA

DBSCAN-SWA_5

4662798 : 4669222

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBE74357.1\|4662798_4663887_-	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	1.0e-210	99.7
QBE74358.1\|4663973_4664234_-	hypothetical protein	A0A077SK33	Escherichia_phage	2.1e-40	97.7
QBE74359.1\|4664531_4665392_+	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
QBE74360.1\|4665412_4666174_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
QBE74361.1\|4667343_4668609_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	2.3e-233	99.5
QBE74362.1\|4668601_4669222_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_6

5155655 : 5241659

Salmonella_phage(13.56%)

tRNA,plate,terminase,holin,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBE74765.1\|5155655_5156240_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
QBE74766.1\|5156357_5157449_+	redox-regulated ATPase YchF	NA	NA	NA	NA
QBE74767.1\|5157526_5157856_-	DUF1869 domain-containing protein	NA	NA	NA	NA
QBE74768.1\|5160416_5160860_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
QBE74769.1\|5160862_5161405_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
QBE74770.1\|5162424_5164188_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
QBE74771.1\|5167712_5168870_-	type VI secretion protein	NA	NA	NA	NA
QBE74772.1\|5168873_5169140_-	PAAR domain-containing protein	NA	NA	NA	NA
QBE74773.1\|5169418_5169697_-	hypothetical protein	NA	NA	NA	NA
QBE74774.1\|5170362_5171256_-	sulfatase modifying factor 1	A0A075BSL8	Microcystis_phage	1.6e-15	30.2
QBE74775.1\|5171439_5172333_-	sulfatase modifying factor 1	A0A075BSL8	Microcystis_phage	5.7e-13	27.3
QBE74776.1\|5172508_5173402_-	sulfatase modifying factor 1	A0A075BSL8	Microcystis_phage	6.3e-12	26.8
QBE74777.1\|5176233_5176758_-	hypothetical protein	NA	NA	NA	NA
QBE74778.1\|5176776_5179263_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
QBE74779.1\|5179721_5181419_-	OmpA family protein	NA	NA	NA	NA
QBE74780.1\|5181422_5182076_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
QBE74781.1\|5182072_5183413_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
QBE74782.1\|5183982_5184312_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA
QBE74783.1\|5184381_5184966_+	DUF2058 domain-containing protein	NA	NA	NA	NA
QBE74784.1\|5184991_5185690_-	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	2.6e-05	27.2
QBE74785.1\|5185880_5186363_+	cold shock domain-containing protein	NA	NA	NA	NA
QBE74786.1\|5187336_5187654_-	hypothetical protein	K7PGV5	Enterobacterial_phage	1.8e-22	51.0
QBE74787.1\|5187653_5187893_-	hypothetical protein	K7P7N3	Enterobacteria_phage	1.1e-16	53.2
QBE74788.1\|5187966_5188611_-	hypothetical protein	A0A1I9SEN3	Klebsiella_phage	1.0e-32	45.4
QBE74789.1\|5190744_5191788_-	hypothetical protein	A0A077KC23	Edwardsiella_phage	4.4e-17	41.5
QBE74790.1\|5191789_5192377_-	DUF2612 domain-containing protein	A0A077K9U8	Edwardsiella_phage	3.8e-34	43.4
QBE74791.1\|5192369_5193602_-	hypothetical protein	A0A077KGW9	Edwardsiella_phage	1.0e-105	51.0
QBE74792.1\|5193609_5193966_-	hypothetical protein	NA	NA	NA	NA
QBE74793.1\|5194028_5194316_-	hypothetical protein	NA	NA	NA	NA
QBE75245.1\|5194383_5195262_-	antirepressor protein Ant	Q0H8C7	Salmonella_phage	1.1e-88	88.0
QBE74794.1\|5195403_5195571_-	Arc family DNA-binding protein	I6S1K8	Salmonella_phage	6.8e-05	44.7
QBE74795.1\|5195659_5195896_+	Arc family DNA-binding protein	G0ZNE9	Cronobacter_phage	5.9e-18	62.3
QBE74796.1\|5195892_5196546_+	hypothetical protein	NA	NA	NA	NA
QBE74797.1\|5196559_5197210_-	hypothetical protein	NA	NA	NA	NA
QBE74798.1\|5197206_5197794_-	hypothetical protein	A0A1I9SEV6	Klebsiella_phage	1.7e-05	30.6
QBE74799.1\|5197783_5198653_-	hypothetical protein	NA	NA	NA	NA
QBE74800.1\|5198649_5198955_-	hypothetical protein	A0A077K9U4	Edwardsiella_phage	2.8e-20	48.5
QBE74801.1\|5198956_5199796_-	hypothetical protein	A0A077KGW3	Edwardsiella_phage	6.3e-30	32.1
QBE74802.1\|5199799_5201725_-	lytic transglycosylase domain-containing protein	A0A0M4REK7	Salmonella_phage	4.5e-39	54.4
QBE74803.1\|5201926_5202403_-	hypothetical protein	A0A068CGG2	Acinetobacter_phage	5.5e-07	29.8
QBE74804.1\|5202482_5203040_-	Rha family transcriptional regulator	A0A088CBJ5	Shigella_phage	4.5e-85	85.9
QBE74805.1\|5203219_5203663_-	hypothetical protein	NA	NA	NA	NA
QBE74806.1\|5203662_5205144_-	DUF3383 domain-containing protein	Q2NPD0	Xanthomonas_phage	2.3e-59	34.6
QBE74807.1\|5205147_5205699_-	hypothetical protein	NA	NA	NA	NA
QBE74808.1\|5205680_5206049_-	hypothetical protein	Q6UJ26	Burkholderia_virus	1.6e-06	29.8
QBE74809.1\|5206045_5206609_-	hypothetical protein	A0A190XCA2	Acinetobacter_phage	5.3e-17	35.6
QBE74810.1\|5206611_5207055_-	DUF4054 domain-containing protein	A0A1X9SF97	Acinetobacter_phage	2.5e-14	40.5
QBE74811.1\|5207054_5207381_-	hypothetical protein	H9C0V9	Aeromonas_phage	2.1e-10	42.5
QBE74812.1\|5207382_5208420_-	DUF2184 domain-containing protein	A0A219YBB0	Aeromonas_phage	1.7e-85	50.6
QBE74813.1\|5208419_5208902_-	hypothetical protein	A0A219YBF2	Aeromonas_phage	2.7e-33	49.7
QBE74814.1\|5208903_5210073_-	DUF2213 domain-containing protein	A0A219YCD3	Aeromonas_phage	8.4e-57	37.0
QBE75246.1\|5210076_5210775_-\|head	phage head morphogenesis protein	H9C0V1	Aeromonas_phage	2.7e-58	49.6
QBE74815.1\|5210827_5212348_-	DUF1073 domain-containing protein	A0A2R3UAL5	Myoviridae_environmental_samples	5.7e-106	44.1
QBE74816.1\|5212348_5214025_-\|terminase	terminase	H9C191	Pectobacterium_phage	1.0e-249	74.4
QBE74817.1\|5214026_5214512_-	DUF2280 domain-containing protein	H9C190	Pectobacterium_phage	1.2e-65	78.9
QBE74818.1\|5214543_5215179_-	hypothetical protein	I6S676	Salmonella_phage	4.2e-103	82.1
QBE75247.1\|5216136_5216442_-\|holin	holin	A0A286N2Q5	Klebsiella_phage	8.6e-46	97.9
QBE74819.1\|5216560_5217100_-	HNH endonuclease	D6PIK0	uncultured_phage	6.2e-23	39.8
QBE74820.1\|5217867_5218557_-	antiterminator	I6PDF8	Cronobacter_phage	7.6e-58	55.8
QBE74821.1\|5218553_5218694_-	YlcG family protein	NA	NA	NA	NA
QBE74822.1\|5218916_5219498_-	recombination protein NinG	E7C9S3	Salmonella_phage	3.2e-41	47.3
QBE74823.1\|5219490_5219661_-	hypothetical protein	G8C7V4	Escherichia_phage	5.7e-15	73.2
QBE74824.1\|5219660_5220116_-	hypothetical protein	K7P7B8	Enterobacteria_phage	1.0e-55	69.5
QBE74825.1\|5220658_5221585_-	hypothetical protein	A0A1R3Y6Z6	Salmonella_virus	4.8e-55	41.5
QBE74826.1\|5222258_5222657_-	hypothetical protein	A0A2H4N7C3	Pectobacterium_phage	3.5e-07	50.0
QBE75248.1\|5223383_5223683_-	protein ren	M1FPD5	Enterobacteria_phage	4.4e-18	54.7
QBE74827.1\|5223687_5225061_-	replicative DNA helicase	E5AGF0	Erwinia_phage	2.6e-166	63.8
QBE74828.1\|5225057_5226143_-	DNA replication protein	E5AGE9	Erwinia_phage	1.2e-84	45.6
QBE74829.1\|5226367_5226589_-	transcriptional regulator	NA	NA	NA	NA
QBE74830.1\|5226629_5226857_-	helix-turn-helix domain-containing protein	Q76H55	Enterobacteria_phage	1.4e-24	77.1
QBE74831.1\|5226968_5227667_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	3.4e-106	83.2
QBE74832.1\|5227691_5227970_+	hypothetical protein	NA	NA	NA	NA
QBE74833.1\|5227957_5228557_+	hypothetical protein	K7P6H4	Enterobacteria_phage	5.5e-12	29.9
QBE74834.1\|5229226_5229433_+	cell division inhibitor protein	A0A0M4S6W3	Salmonella_phage	1.4e-31	94.1
QBE74835.1\|5229513_5229798_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	2.0e-28	60.6
QBE74836.1\|5229813_5230659_+	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	9.0e-69	59.2
QBE74837.1\|5230655_5231336_+	exonuclease	A0A0M3ULE0	Salmonella_phage	6.7e-123	92.5
QBE74838.1\|5231332_5231491_+	DUF1317 family protein	A0A0N7CHV0	Escherichia_phage	3.0e-10	60.8
QBE74839.1\|5231487_5232015_+	hypothetical protein	NA	NA	NA	NA
QBE74840.1\|5231990_5232653_+	DNA methyltransferase	G8C7S6	Escherichia_phage	6.7e-112	87.0
QBE74841.1\|5232649_5233819_+	DNA cytosine methyltransferase	Q858D4	Salmonella_phage	7.4e-146	67.8
QBE74842.1\|5233815_5234034_+	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	4.6e-09	45.8
QBE75249.1\|5234035_5234251_+	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	2.0e-12	51.4
QBE74843.1\|5234254_5234500_+	excisionase	A0A286S2A4	Klebsiella_phage	1.4e-35	92.1
QBE74844.1\|5234542_5235805_+	DUF3596 domain-containing protein	A0A286S1S8	Klebsiella_phage	5.1e-233	94.8
QBE74845.1\|5236865_5238161_-	MFS transporter	Q6JIH2	Burkholderia_virus	9.6e-62	36.8
QBE74846.1\|5238464_5239391_-	LysR family transcriptional regulator	NA	NA	NA	NA
QBE74847.1\|5239489_5239966_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
QBE74848.1\|5240015_5241659_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	5.7e-136	50.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP035907

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

9171 : 67732

Enterobacteria_phage(15.38%)

transposase,integrase

attL 48509:48524|attR 74558:74573

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBE75572.1\|9171_9456_-\|transposase	transposase	NA	NA	NA	NA
QBE75446.1\|9424_10438_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
QBE75447.1\|10610_11063_+	NAD(+)--rifampin ADP-ribosyltransferase Arr-2	NA	NA	NA	NA
QBE75573.1\|11143_12397_-	group II intron reverse transcriptase/maturase	H7BVN7	unidentified_phage	3.0e-12	29.7
QBE75448.1\|13117_13672_+	AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase	NA	NA	NA	NA
QBE75449.1\|16506_17139_-	type B chloramphenicol O-acetyltransferase	A0A2R8FE91	Brazilian_cedratvirus	2.6e-28	40.9
QBE75450.1\|18726_18840_-	NTP-binding protein	NA	NA	NA	NA
QBE75451.1\|19730_19952_+	resolvase	NA	NA	NA	NA
QBE75452.1\|20031_20271_+	methionine repressor-like protein	NA	NA	NA	NA
QBE75453.1\|20270_20681_+	putative toxin-antitoxin system toxin component, PIN family	NA	NA	NA	NA
QBE75454.1\|20684_23678_+\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	1.3e-258	46.6
QBE75455.1\|25059_25665_+	DNA resolvase	A0A1S5Y2X8	uncultured_archaeal_virus	5.5e-20	35.3
QBE75456.1\|26324_27506_+	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	1.9e-120	64.2
QBE75457.1\|27932_28247_-	hypothetical protein	NA	NA	NA	NA
QBE75574.1\|28501_28858_-	cupin domain-containing protein	NA	NA	NA	NA
QBE75458.1\|28847_29249_-	DUF86 domain-containing protein	NA	NA	NA	NA
QBE75459.1\|29245_29536_-	nucleotidyltransferase	NA	NA	NA	NA
QBE75460.1\|29610_32577_+\|transposase	Tn3-like element ISPa38 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.2
QBE75461.1\|32655_33660_+\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
QBE75462.1\|35505_37698_+	1,4-alpha-glucan branching enzyme	NA	NA	NA	NA
QBE75463.1\|37827_39111_+	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA
QBE75464.1\|40469_40865_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
QBE75575.1\|40913_42260_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
QBE75576.1\|42485_43118_+	hypothetical protein	NA	NA	NA	NA
QBE75465.1\|43146_44550_-\|transposase	ISNCY-like element ISKpn21 family transposase	NA	NA	NA	NA
QBE75466.1\|44820_45255_-	cell envelope integrity protein TolA	NA	NA	NA	NA
QBE75467.1\|45301_45850_-	thioredoxin-like domain protein	NA	NA	NA	NA
QBE75468.1\|45981_46218_-	hypothetical protein	NA	NA	NA	NA
QBE75577.1\|46343_46652_+	hypothetical protein	NA	NA	NA	NA
QBE75469.1\|46541_46841_-	hypothetical protein	NA	NA	NA	NA
QBE75470.1\|46884_47379_-	DNA-binding protein	NA	NA	NA	NA
QBE75471.1\|47409_47982_-	hypothetical protein	NA	NA	NA	NA
QBE75472.1\|47978_48227_-	hypothetical protein	NA	NA	NA	NA
48509:48524	attL	NA	NA	NA	NA
QBE75473.1\|51428_52451_+\|transposase	IS21-like element ISSen3 family transposase	A0A2L1IVA1	Escherichia_phage	8.7e-175	85.6
QBE75474.1\|52447_53230_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	6.1e-136	96.5
QBE75475.1\|53910_54351_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	2.6e-19	60.3
QBE75476.1\|54347_54698_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	5.2e-39	63.8
QBE75477.1\|56904_59709_+	hypothetical protein	NA	NA	NA	NA
QBE75478.1\|59852_60881_-	hypothetical protein	NA	NA	NA	NA
QBE75479.1\|61021_61591_-	hypothetical protein	NA	NA	NA	NA
QBE75578.1\|62236_62443_+	hypothetical protein	NA	NA	NA	NA
QBE75480.1\|62488_62797_+	hypothetical protein	NA	NA	NA	NA
QBE75481.1\|62824_63154_+	hypothetical protein	NA	NA	NA	NA
QBE75579.1\|63221_63578_+	hypothetical protein	NA	NA	NA	NA
QBE75482.1\|63584_63917_+	hypothetical protein	NA	NA	NA	NA
QBE75483.1\|63916_64699_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	4.6e-51	90.2
QBE75484.1\|65553_65748_-	hypothetical protein	NA	NA	NA	NA
QBE75485.1\|65912_66386_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA
QBE75486.1\|66505_67732_-\|transposase	ISL3-like element ISKpn25 family transposase	A0A2D1GQC1	Lysinibacillus_phage	8.0e-58	35.1
74558:74573	attR	NA	NA	NA	NA

DBSCAN-SWA_2

75629 : 84433

Enterobacteria_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBE75490.1\|75629_76604_-	ParB/RepB/Spo0J family partition protein	Q1MVJ4	Enterobacteria_phage	1.4e-105	62.3
QBE75491.1\|76600_77806_-	ParA family protein	Q1MVJ3	Enterobacteria_phage	7.3e-205	89.0
QBE75492.1\|78127_79024_-	RepB family plasmid replication initiator protein	Q71TL8	Escherichia_phage	3.3e-69	53.8
QBE75493.1\|79424_80696_-	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	3.6e-154	63.7
QBE75494.1\|80695_81127_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	7.9e-29	52.5
QBE75580.1\|81358_82330_+	StbA family protein	A0A222YXF2	Escherichia_phage	1.1e-73	46.8
QBE75495.1\|82332_83004_+	Mediator of plasmid stability	NA	NA	NA	NA
QBE75496.1\|83064_83295_+	hypothetical protein	NA	NA	NA	NA
QBE75497.1\|83731_84433_+	DNA methylase	A0A2I7RE86	Vibrio_phage	7.1e-27	36.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. CP035908

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

103860 : 128954

Salmonella_phage(27.27%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBE75718.1\|103860_104865_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
QBE75719.1\|104943_107916_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.1
QBE75720.1\|107918_108476_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	5.8e-48	81.3
QBE75721.1\|109963_110437_+	trimethoprim-resistant dihydrofolate reductase DfrA	G3MBI7	Bacillus_virus	3.5e-14	28.3
QBE75722.1\|110657_110924_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
QBE75723.1\|111066_111831_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
QBE75724.1\|111872_112085_+	resolvase	NA	NA	NA	NA
QBE75725.1\|112097_113306_+	restriction endonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
QBE75726.1\|113339_114773_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.0e-106	50.6
QBE75727.1\|120122_120680_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
QBE75728.1\|120862_121723_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
QBE75729.1\|121932_122472_+\|transposase	IS91 family transposase	NA	NA	NA	NA
QBE75775.1\|122443_123280_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
QBE75730.1\|123279_124083_-	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
QBE75731.1\|124143_124959_-	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	5.9e-09	27.6
QBE75732.1\|125288_125465_+	DUF4102 domain-containing protein	T1S9J3	Salmonella_phage	1.0e-06	68.6
QBE75733.1\|125646_126651_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
QBE75734.1\|128249_128954_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. CP035906

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4476 : 60227

Bacillus_phage(17.39%)

transposase,integrase

attL 3347:3363|attR 43744:43760

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3347:3363	attL	NA	NA	NA	NA
QBE75267.1\|4476_5400_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.7e-166	92.8
QBE75268.1\|5633_6128_-	DNA-binding protein	NA	NA	NA	NA
QBE75269.1\|6933_7638_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QBE75270.1\|9053_10454_-	copper resistance membrane spanning protein PcoS	W8CYF6	Bacillus_phage	4.1e-18	26.3
QBE75271.1\|10450_11131_-	copper response regulator transcription factor PcoR	W8CYM9	Bacillus_phage	8.7e-30	34.4
QBE75272.1\|11185_12115_-	copper resistance inner membrane protein PcoD	NA	NA	NA	NA
QBE75273.1\|12119_12500_-	copper resistance system metallochaperone PcoC	NA	NA	NA	NA
QBE75430.1\|12539_13436_-	copper resistance outer membrane transporter PcoB	NA	NA	NA	NA
QBE75274.1\|13435_15253_-	multicopper oxidase PcoA	NA	NA	NA	NA
QBE75275.1\|15486_15936_+	copper resistance protein	NA	NA	NA	NA
QBE75276.1\|16224_16962_+	peptidase M23	A0A2H4JAF5	uncultured_Caudovirales_phage	1.2e-11	32.5
QBE75277.1\|16995_17193_-	DUF2933 domain-containing protein	NA	NA	NA	NA
QBE75278.1\|17233_19681_-	Ag(+)-translocating P-type ATPase SilP	A0A218MNH6	uncultured_virus	7.6e-84	35.8
QBE75279.1\|19807_20248_-	hypothetical protein	NA	NA	NA	NA
QBE75280.1\|20334_23481_-	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	S5VTK5	Leptospira_phage	4.0e-61	22.5
QBE75281.1\|23491_24784_-	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	NA	NA
QBE75282.1\|24897_25260_-	copper ABC transporter substrate-binding protein	NA	NA	NA	NA
QBE75283.1\|25288_26674_-	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	NA	NA
QBE75284.1\|26863_27544_+	copper/silver response regulator transcription factor SilR	W8CYM9	Bacillus_phage	1.3e-30	35.7
QBE75285.1\|27536_29012_+	copper/silver sensor histidine kinase SilS	W8CYF6	Bacillus_phage	1.0e-27	30.1
QBE75286.1\|29262_29694_+	silver-binding protein SilE	NA	NA	NA	NA
QBE75287.1\|29834_30185_+	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	3.2e-20	53.3
QBE75431.1\|30571_31480_-	HNH endonuclease	NA	NA	NA	NA
QBE75288.1\|32116_33091_+	sensor domain-containing diguanylate cyclase	NA	NA	NA	NA
QBE75432.1\|34023_34836_+	hypothetical protein	NA	NA	NA	NA
QBE75289.1\|34832_35612_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	6.0e-51	89.4
QBE75290.1\|35756_36686_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	5.6e-72	52.4
QBE75291.1\|36998_37157_+	hypothetical protein	A0A0U2RK18	Escherichia_phage	2.2e-05	69.7
QBE75292.1\|39848_40715_+	ParA family protein	NA	NA	NA	NA
QBE75293.1\|40714_41746_+	ParB/RepB/Spo0J family partition protein	S5WII0	Leptospira_phage	2.9e-08	26.1
QBE75433.1\|41745_42183_+	hypothetical protein	NA	NA	NA	NA
QBE75294.1\|44529_45312_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	3.0e-135	96.1
43744:43760	attR	NA	NA	NA	NA
QBE75295.1\|48062_48599_+	plasmid transfer protein	NA	NA	NA	NA
QBE75296.1\|50918_51929_-	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	1.1e-86	53.5
QBE75297.1\|51958_52240_+	hypothetical protein	NA	NA	NA	NA
QBE75298.1\|52454_52703_-	hypothetical protein	NA	NA	NA	NA
QBE75299.1\|52658_53825_+	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	2.0e-223	97.4
QBE75300.1\|53824_54796_+	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	7.0e-150	86.9
QBE75301.1\|56086_56269_-	DUF4113 domain-containing protein	A0A1W6JNT0	Morganella_phage	9.1e-11	57.1
QBE75302.1\|56465_56906_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	4.4e-19	53.8
QBE75303.1\|56902_57241_+\|transposase	transposase	A0A0P0ZBY2	Stx2-converting_phage	3.3e-38	64.2
QBE75304.1\|57279_58872_+\|transposase	IS66-like element ISKox1 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.2e-176	61.8
QBE75305.1\|59258_60227_-\|transposase	IS110 family transposase	A0A1S7J231	Thermus_phage	7.3e-14	28.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP035909

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CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP035905

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CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP035907

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CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. CP035908

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CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

5. CP035906

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection