CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
AP019193	Aeromonas hydrophila GSH8-2 DNA, complete genome	8 crisprs	cas3,DEDDh,csa3,DinG,WYL,RT	0	1	4	0
AP019194	Aeromonas hydrophila GSH8-2 plasmid pGSH8-2 DNA, complete genome	0 crisprs	DEDDh	0	0	1	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: AP019193_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP019193_2

746714-746819

Orphan

Consensus_repeat	Method
CTAAACGCCAAGGTTTGATCCGAATGAAATCTGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of AP019193_2

>merge|AP019193|2|746714-746819|CRISPRCasFinder
CTAAACGCCAAGGTTTGATCCGAATGAAATCTGTATAAGCGAGCGACGATGGCGCTGGCCGTTTTATTTGCCCTAAACGCTAAGGTTTGATCCGAATGAAATCTGT

>AP019193|2|2|746714-746819|CRISPRCasFinder
CTAAACGCCAAGGTTTGATCCGAATGAAATCTGT	ATAAGCGAGCGACGATGGCGCTGGCCGTTTTATTTGCC
CTAAACGCTAAGGTTTGATCCGAATGAAATCTGT

Protein	Signature genes	Signature genes Name	Protein_function
AP019193.1\|BBG83532.1\|743040_743487_+\|protein-TolR	unknown	unknown	gnl\|CDD\|274306
AP019193.1\|BBG83526.1\|738715_740272_+\|cytochrome-bd-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|185052
AP019193.1\|BBG83544.1\|761561_761954_+\|peptide-methionine-(R)-S-oxide-reductase	unknown	unknown	gnl\|CDD\|376583
AP019193.1\|BBG83538.1\|751446_752520_+\|quinolinate-synthase-A	unknown	unknown	gnl\|CDD\|236489
AP019193.1\|BBG83534.1\|744750_746076_+\|protein-TolB	unknown	unknown	gnl\|CDD\|235312
AP019193.1\|BBG83542.1\|757186_759364_+\|1,4-alpha-glucan-branching-enzyme-GlgB	unknown	unknown	gnl\|CDD\|235445
AP019193.1\|BBG83530.1\|741954_742362_+\|acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|274304
AP019193.1\|BBG83527.1\|740284_741421_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|184965
AP019193.1\|BBG83531.1\|742351_743041_+\|Tol-Pal-system-subunit-TolQ	unknown	unknown	gnl\|CDD\|131843
AP019193.1\|BBG83541.1\|754914_757104_+\|4-alpha-glucanotransferase	unknown	unknown	gnl\|CDD\|236831
AP019193.1\|BBG83539.1\|752590_753457_-\|D-hexose-6-phosphate-mutarotase	unknown	unknown	gnl\|CDD\|185697
AP019193.1\|BBG83545.1\|762034_763186_-\|chorismate-binding-protein	unknown	unknown	gnl\|CDD\|273350
AP019193.1\|BBG83543.1\|759363_761505_+\|glycogen-operon-protein-GlgX-homolog	unknown	unknown	gnl\|CDD\|131155
AP019193.1\|BBG83540.1\|753572_754568_-\|glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|185323
AP019193.1\|BBG83528.1\|741434_741551_+\|cyd-operon-protein-YbgT	unknown	unknown	gnl\|CDD\|227227
AP019193.1\|BBG83529.1\|741603_741849_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370577
AP019193.1\|BBG83546.1\|763423_763867_-\|ADP-ribose-pyrophosphatase	unknown	unknown	gnl\|CDD\|240034
AP019193.1\|BBG83535.1\|746125_746650_+\|peptidoglycan-associated-lipoprotein	unknown	unknown	gnl\|CDD\|182744
AP019193.1\|BBG83533.1\|743498_744656_+\|protein-TolA	unknown	unknown	gnl\|CDD\|368950
AP019193.1\|BBG83537.1\|749200_751306_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910

Protein	Function_ID	Function_description	E-value
AP019193.1\|BBG83532.1\|743040_743487_+\|protein-TolR	gnl\|CDD\|274306	TIGR02801, Protein_TolR, TolR protein. The model describes the inner membrane protein TolR, part of the TolR/TolQ complex that transduces energy from the proton-motive force, through TolA, to an outer membrane complex made up of TolB and Pal (peptidoglycan-associated lipoprotein). The complex is required to maintain outer membrane integrity, and defects may cause a defect in the import of some organic compounds in addition to the resulting morphologic. While several gene pairs homologous to talR and tolQ may be found in a single genome, but the scope of this model is set to favor finding only bone fide TolR, supported by operon structure as well as by score. [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	5.92405e-42
AP019193.1\|BBG83526.1\|738715_740272_+\|cytochrome-bd-oxidase-subunit-I	gnl\|CDD\|185052	PRK15097, PRK15097, cytochrome bd-I ubiquinol oxidase subunit CydA.	0
AP019193.1\|BBG83544.1\|761561_761954_+\|peptide-methionine-(R)-S-oxide-reductase	gnl\|CDD\|376583	pfam01641, SelR, SelR domain. Methionine sulfoxide reduction is an important process, by which cells regulate biological processes and cope with oxidative stress. MsrA, a protein involved in the reduction of methionine sulfoxides in proteins, has been known for four decades and has been extensively characterized with respect to structure and function. However, recent studies revealed that MsrA is only specific for methionine-S-sulfoxides. Because oxidized methionines occur in a mixture of R and S isomers in vivo, it was unclear how stereo-specific MsrA could be responsible for the reduction of all protein methionine sulfoxides. It appears that a second methionine sulfoxide reductase, SelR, evolved that is specific for methionine-R-sulfoxides, the activity that is different but complementary to that of MsrA. Thus, these proteins, working together, could reduce both stereoisomers of methionine sulfoxide. This domain is found both in SelR proteins and fused with the peptide methionine sulfoxide reductase enzymatic domain pfam01625. The domain has two conserved cysteine and histidines. The domain binds both selenium and zinc. The final cysteine is found to be replaced by the rare amino acid selenocysteine in some members of the family. This family has methionine-R-sulfoxide reductase activity.	2.95803e-74
AP019193.1\|BBG83538.1\|751446_752520_+\|quinolinate-synthase-A	gnl\|CDD\|236489	PRK09375, PRK09375, quinolinate synthase NadA.	0
AP019193.1\|BBG83534.1\|744750_746076_+\|protein-TolB	gnl\|CDD\|235312	PRK04792, tolB, Tol-Pal system protein TolB.	0
AP019193.1\|BBG83542.1\|757186_759364_+\|1,4-alpha-glucan-branching-enzyme-GlgB	gnl\|CDD\|235445	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB.	0
AP019193.1\|BBG83530.1\|741954_742362_+\|acyl-CoA-thioester-hydrolase	gnl\|CDD\|274304	TIGR02799, Acyl-CoA_thioesterase_YbgC, tol-pal system-associated acyl-CoA thioesterase. The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import of certain organics but also in the maintenance of outer membrane integrity (by an unknown mechanism).	5.78381e-54
AP019193.1\|BBG83527.1\|740284_741421_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|184965	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II.	1.31458e-166
AP019193.1\|BBG83531.1\|742351_743041_+\|Tol-Pal-system-subunit-TolQ	gnl\|CDD\|131843	TIGR02796, Protein_TolQ, TolQ protein. TolQ is one of the essential components of the Tol-Pal system. Together with TolR, it harnesses protonmotive force to energize TolA, which spans the periplasm to reach the complex of TolB and Pal at the outer member. The tol-pal system proves to be important for maintaining outer membrane integrity. Gene pairs similar to the TolQ and TolR gene pair often number several per genome, but this model describes specificially TolQ per se, as found in tol-pal operons. A close homolog, excluded from this model, is ExbB of the ExbB/ExbD/TonB protein complex, which powers transport of siderophores and vitamin B12 across the bacterial outer membrane. The Tol-Pal system is exploited by colicin and filamentous phage DNA to enter the cell. It is also implicated in pathogenesis in several bacterial species [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	7.20038e-107
AP019193.1\|BBG83541.1\|754914_757104_+\|4-alpha-glucanotransferase	gnl\|CDD\|236831	PRK11052, malQ, 4-alpha-glucanotransferase; Provisional.	0
AP019193.1\|BBG83539.1\|752590_753457_-\|D-hexose-6-phosphate-mutarotase	gnl\|CDD\|185697	cd09020, D-hex-6-P-epi_like, D-hexose-6-phosphate epimerase-like. D-Hexose-6-phosphate epimerase Ymr099c from Saccharomyces cerevisiae belongs to the large superfamily of aldose-1-epimerases. Its active site is very similar to the catalytic site of galactose mutarotase, the best studied member of the superfamily. It also contains the conserved glutamate and histidine residues that have been shown in galactose mutarotase to be critical for catalysis, the glutamate serving as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. In addition Ymr099c contains 2 conserved arginine residues which are involved in phosphate binding, and exhibits hexose-6-phosphate mutarotase activity on glucose-6-P, galactose-6-P and mannose-6-P.	1.33364e-118
AP019193.1\|BBG83545.1\|762034_763186_-\|chorismate-binding-protein	gnl\|CDD\|273350	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family. Members of this family probably act as chromate transporters, and are found in Pseudomonas aeruginosa, Alcaligenes eutrophus, Vibrio cholerae, Bacillus subtilis, Ochrobactrum tritici, cyanobacteria and archaea. The protein reduces chromate accumulation and is essential for chromate resistance. [Transport and binding proteins, Anions].	3.06482e-67
AP019193.1\|BBG83543.1\|759363_761505_+\|glycogen-operon-protein-GlgX-homolog	gnl\|CDD\|131155	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
AP019193.1\|BBG83540.1\|753572_754568_-\|glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|185323	PRK15425, gapA, glyceraldehyde-3-phosphate dehydrogenase.	0
AP019193.1\|BBG83528.1\|741434_741551_+\|cyd-operon-protein-YbgT	gnl\|CDD\|227227	COG4890, COG4890, Predicted outer membrane lipoprotein [Function unknown].	9.94001e-13
AP019193.1\|BBG83529.1\|741603_741849_+\|hypothetical-protein	gnl\|CDD\|370577	pfam09600, Cyd_oper_YbgE, Cyd operon protein YbgE (Cyd_oper_YbgE). This entry describes a small protein of unknown function, about 100 amino acids in length, essentially always found in an operon with CydAB, subunits of the cytochrome d terminal oxidase. It appears to be an integral membrane protein. It is found so far only in the Proteobacteria.	4.12912e-18
AP019193.1\|BBG83546.1\|763423_763867_-\|ADP-ribose-pyrophosphatase	gnl\|CDD\|240034	cd04678, Nudix_Hydrolase_19, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	2.44139e-52
AP019193.1\|BBG83535.1\|746125_746650_+\|peptidoglycan-associated-lipoprotein	gnl\|CDD\|182744	PRK10802, PRK10802, peptidoglycan-associated lipoprotein Pal.	3.5678e-77
AP019193.1\|BBG83533.1\|743498_744656_+\|protein-TolA	gnl\|CDD\|368950	pfam06519, TolA, TolA C-terminal. This family consists of several bacterial TolA proteins as well as two eukaryotic proteins of unknown function. Tol proteins are involved in the translocation of group A colicins. Colicins are bacterial protein toxins, which are active against Escherichia coli and other related species (See pfam01024). TolA is anchored to the cytoplasmic membrane by a single membrane spanning segment near the N-terminus, leaving most of the protein exposed to the periplasm.	8.63349e-21
AP019193.1\|BBG83537.1\|749200_751306_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	2.27242e-64

>AP019193.1|BBG83535.1|746125_746650_+|peptidoglycan-associated-lipoprotein
MQLNKLLKGLAIALPLFTLAACSSSSDSDAAGAESGMTDGMGGVQTGGANGMLSPEEQMRQKFEALQRDNVIYFPFDGYDIQGQYADLLDAHASYLRERPSVKVLIEGHADERGTPEYNIALGERRAKAVAKYLQTLGVQAEQLSIVSYGEEKPLDMSHTEDAFAKNRRAVLVY
>AP019193.1|BBG83534.1|744750_746076_+|protein-TolB
MIRKVFFALVGCLLLGQSAQAALDIVITGGIDSARPIAVAPFKWEGNGQLPQDIAEVVSNDLMRSGKFKPLARGQMPQTPSTSGEINFAPWASQGVEAVVVGSIAAVGDGTYKINFELVDVLKGQLAKAQGGESNGYILDSRMATIPGAQMRQFAHRISDIVYERLTGERGAFLTRLAYVSVQQGTQFPYQLRIADYDGYNEKTLLRSREPLMSPAWSPDGSKLAYVSFENQKSEIYVQDIYTQQRSLITSFRGINGAPEWSPDGRRLAIVLSKDGSPNLYVVDVASKQLTRVTTSRVIDTEPSWMPDGQNLLFTSERGGKPQIYSVNLATGMTRRMTWEGESNQGASITPDGKIMVMVTRVQGQYRIARQDMENNALLVLTQSALDESPSVAPNGSMIIYATIYQGRKSLALVSTDGRFKAVLPTSSGEIRAPAWSPFLN
>AP019193.1|BBG83533.1|743498_744656_+|protein-TolA
MKRGISGYLIASLLLHLIIGIILFVGLDFSKPKRPESKGQIVNAVMLDENFLNEQAKQIQQQKSQPKPQKVEKEKDKEDTDIAKRELAQQQERLRIAETKRKEAEEATRKAEAEKQKKVAEQKQAEEKAQKAEEARKLEEQKAKKVEAERKAAEEESKALALKKKKEQEKKEAEEKQAKADAAKKAEAEKKAKQEAEKKAKAEADKKAKAEAEKKAKAEADKKAKEAKEEAAKKAKADAEKKAKAEADKQAKIAAERKRKAAEEAKLQKEMEDMMQQQLAAEANARSQAASAAAQGEVDKYAALIKATVERYMILDPTMRGKTCTIGVRLASTGFVISVDNGQGDPAVCRSGKAAVLKANQLPVPKDPAAFEMLKEFNLKLEPSI
>AP019193.1|BBG83532.1|743040_743487_+|protein-TolR
MQTYQRIRRKKVAEINVVPYIDVMLVLLIIFMAVTPVITQGVKVDLPQAESEQLPEDAKPPFIVSVNTEGEYVIKAGEADDEPVPAGTPEAMQQYITEKAMGYLAINQNAPVVVAGDKSVRYEEVILLMVALKKAGVPQVGLMTDPVN
>AP019193.1|BBG83531.1|742351_743041_+|Tol-Pal-system-subunit-TolQ
MHAEISFIGLFWQASLLVKLVMMTLMGMSVVSWALIIQRSKAIKAANLASEQFEDRFWSGVDLNRLYQESSSRRDDIEGMEDIFYSGFKEYARLLKAGARGQDAVMDGTYRAMRVSLSRAVDELESNLPVLATIGSISPYIGLFGTVWGIMNAFIALGQVQQATLQMVAPGIAEALIATAMGLFAAIPAVIFYNRFSNKVERLENAYANFMDEFTTILNRQIAQQQGDQ
>AP019193.1|BBG83530.1|741954_742362_+|acyl-CoA-thioester-hydrolase
MGEVSEFPVRVYYEDTDAGGIVYNANYLKFMERARTEFLRCGGIEQDVMLRDGFAFVVSRTEIDFRSAARFNELLTVLTQVTEVKRASMRFSQRILAADGRLITQAMVQIACVSHPHMKPVAIPENVKGVLLSAR
>AP019193.1|BBG83529.1|741603_741849_+|hypothetical-protein
MLLAAALLAVAILQAPNLVAANTSEHGLWLAPWLMWAVCCGVMHGLGFHPRSLIGRVLFCPWLAWPSLLYGLWLTQGYFLS
>AP019193.1|BBG83528.1|741434_741551_+|cyd-operon-protein-YbgT
MWYFTWILGLLLACAFGIINALWLEHTENMDRQIDENK
>AP019193.1|BBG83527.1|740284_741421_+|cytochrome-d-ubiquinol-oxidase-subunit-II
MFDYEMLRLVWWVLVGVLLIGFAITDGFDMGVGALLPFVGKKDVERRVMLNTMGPHWEGNQVWLVTAGGALFAAWPMVYAAAFSGFYIAMILTLMALFFRPVGFKYRSLREDAKWRSNWDWALFVGSAVPPIVFGVAFGNLLQGVPFDFNQFMMLTYHGNFFGLLNPFGLLAGLVSLFMLVTQGATWLMMKTDGEVLARSRTAAMICSLLTLVLFGLAGFWVSGMEGYVVVKAAATDAVSNPMNKEVVRQAGAWMNNYSLYPWMVAAPVLGLAMSLLTALFAKLNKGWLAFTTSSLAVAGVILTAGFSMFPFVMPSSLEPSLSLTMWDATASFNTLKVMTVAAAIFVPIVLGYTLWTYIKMFGRVTSKHIEDNQQSLY
>AP019193.1|BBG83526.1|738715_740272_+|cytochrome-bd-oxidase-subunit-I
MIAEHVVDLSRFQFAATALYHFLFVPLTLGMAFILAIMESVYVMTNNPVYRDMTKFWGKLFGINFALGVTTGLTMEFQFGTNWAYYSHYVGDIFGAPLAIEGLMAFFLESTFVGMFFFGWDRLSKRQHLAATWLMALGTNLSALWILVANGWMQNPVGAEFNFESMRMEMVSFAELVFNPVAQVKFVHTVAAGYTTGAMFVLGISSYYLLKNRDVAFARRSFAIAAAFGMASILSVLILGDESGYETGEVQKVKLAAIEAEWNTEPAPASFTLFGIPNQEEMRTDYAIKIPYALGIIATRSLDGQVTGLKDLKSEHELRVRNGMTAYDLLTKLQSGDKSDDTRARFDEVKQDLGYGLLLKRYTNNVTDATDEQIKAAVDDSIPQVAPLFFAFRIMVACGMLMLLLIGLAFYDSTRHKIGERKWLLKALLYGIPLPWIAIECGWFVAEYGRQPWTIAEVLPTSVSASNVPASEIWFSLIGICLFYTVLLIIEMYLMFKYARLGPSSLKTGKYHFEQSKA
>AP019193.1|BBG83537.1|749200_751306_-|methyl-accepting-chemotaxis-protein
MKQRSLKTKLLLLTMGLFLASGLAMTLMQSSSLNTLRSNIVSQTRQALEQEVSRTLQFQAERYAVQIADLLQQSYQVPLGMAAQLEGSMAQPDRLLSRPQVETLLHSRLQQAGGISSIYAQFEPDGYDGQDASWQAGAPHSVVGKGSLEIYFTRDQGGQISQQPVDAATSAAKYDTSVNEFGIRNSEWYLCGRDTLRPCLMEPYLYEISPGNKMLMTSLTVPVLKAGKFVGITGVDMNLPIFQQLAENLGKSLYDNQAEVTLVSKMGLIVGSNRHADKLGRPLTEAGLTAPTGQEQDTETDFILQQPVRIDAADTQWWLMLKVPKALALSQANTISNQLGDLLQATQQQQLIAIVVITLLALALLIWFIQTITAPLSLISRHVSHLSSNEGDLTQQMRIDTHQELIELGGHLNAFLGKLRGMVQGSKQIGQQVHQQAQGMKQTADTMRSSLDEQSLELESVVSAMHQMSTTAVSVAGYAEQAAQESETATHHISTAQQTLSRARTEIHTLVEDMHLADKAVAQVAQRSTNISRILDVIRAIAEQTNLLALNAAIEAARAGDMGRGFAVVADEVRALANKTRESTDEIGQLIGSLQTEVSSSQQLMSTGITRSASTVEGTEQAFEALNQVVTQIQQIHDHISQVATAAEQQSAVSDTINQNLMRIGDAATTLGQEANASHHLSEQLEQAATALATQLDRLRT
>AP019193.1|BBG83538.1|751446_752520_+|quinolinate-synthase-A
MSNALNNVPPVVEMDYPFPAKPLPLSAEQKTTLIADIKALLKERKAVLVAHYYTDPEIQALAEETGGFVGDSLEMARFGRDHEAQTLIVAGVRFMGETSKILSPHKRVLMPTLEAECSLDLGCPIEQFSAFCDAHPDHIVVVYANTSAAVKARADWVVTSSIALEIVEHLDSQGHKIIWGPDRHLGAYIEKKTGAEMLRWQGHCIVHDEFKARALRELKEQNPDAAVLVHPESPASVIDLADAVGSTSQLIKAAKELPQQKLIVATDRGIFYKMQQACPEKEMVEAPTGGDGATCRSCAHCPWMAMNGLVAIKEALTDGAERHEILVDEALRVKALIPLDRMLNFAAELRLKTQGNA
>AP019193.1|BBG83539.1|752590_753457_-|D-hexose-6-phosphate-mutarotase
MQPTRSLTAHCTLSHHPAGQPLLTVDNGYAKAQISLFGAHVLSYQRHDEPASIWLSDKAVLDGSKPIRGGIPLCWPWFGPAPARVGSGKPSHGFARTSLWTLDGVSDHGDGTLVHLSLRDNEATRQLWPHAFELELDVLVGKELALVLTTRNTGKAPLVYSGALHTYLQISSPESVSVSGLGEPYADKLSGQNGQQQGPLTLNGPLDRVYWQPAAHVSIQDGERETRVVSGNHDSMVVWTPWIEGATAMADMSDDGYRTMLCVEAAIASEAGVTVAPDEEHSFSTVII
>AP019193.1|BBG83540.1|753572_754568_-|glyceraldehyde-3-phosphate-dehydrogenase
MTIKVGINGFGRIGRFVFRLAAERADIEVVGINDLIDVDYMAYMLKYDSTHGRFKGTVEVKDGNLVVNGKTVRVTAERDPANLKWGEIGVDVVAEATGLFLTDETARKHIAAGAKKVVLTGPSKDATPMFVMGVNDATYAGQDIVSNASCTTNCLAPIAKVLNDTFGIESGLMTTVHATTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGVVIPELKGLLTGMAFRVPTPDVSVVDLTVNLKKAATYAEICEAMKAASEGAMKGVLGYTEDEVVSTDFLGERQTSVFDAKAGIQLNDKFVKVVSWYDNEMGYSSKVLDLIAHISK
>AP019193.1|BBG83541.1|754914_757104_+|4-alpha-glucanotransferase
MTTLIEQLAAAKGIASEYVDAWGHPAQVSEESKAAMLGAMGYRVDDEAALTAQLEQEHRQHWLRALDPVMVVRSGEPITLEVRLPIEFVNDALSWQLKLEQGGLLSGQLTPIDGELVGVAEFEEMECQAYRVALAVQPELGYHDLILLEEGNDEPLASMRLIVAPKACYKQPPIANGRKVWGPSVQLYCLRSRHNWGIGDFSDLGQLVEKMAAWGAHFVGLNPIHALYPANPESASPYSPSSRRWLNVAYIDVEAVPEFLANARLKAEVANPAFQQHLSELRAKGNVDYTGVIETKLGMLRQVFDQASLCAERQAAFDAFVAAGGDSLQQQAAFDALQAHFYAKGENAWGWPVWPEPFRDYHNPEVAAWMAEHSQDVNFYLYLQFLADEQLARADARAKAAGMVMGIYRDLAVGVSEGSTEIWANRDLYCPKASVGAPPDILGPLGQNWGLPPMNPNQLFEAAYQPMVDLFRANMRSCGALRIDHVMALLRLWWVPPGESAAKGAYIYYPVNDLLGILALESHRNQCLLIGEDLGTVPEGIDVTLKENGVHSYKVFFFERSKGDGGFISPAHYAEQAMSALTTHDMPTLKGFWHCDDLALGRELGLYPDEDVLKTLYADRHQAKQRILDSLHGHGVISGNISHDVNWVGMNTELNHGLQLHMSRGSCALFSTQLEDWLEMDKPVNVPGTSYEYPNWRRKLSTDLEDIFANEALKALAGKMSQARDEASR
>AP019193.1|BBG83542.1|757186_759364_+|1,4-alpha-glucan-branching-enzyme-GlgB
MLVERLVAARCSDPFSHLGLQANPDGPGLKLTVWLPDAQAVRVRDLKSGKIVATLAPTDDSGLFETVFTRRKNPFPYQLLADYPDATVEVIDPYQFQDAGWAGLAELTYQPENLYHTLGAQLRTVAHLDQQVEGVRFAVYAPSATAVSLIGDFNFWDGRRHPMQRSQCGHWVLFVPGLKAGDRYKFELKDPAGNRLPHKSDPVGFYCEQYPSFASVVYDHDQYQWQDAAWRESQLNDKREQPLSIYELHVGSWKRHPNGDSLSWRELAVELVDYVKGMEYTHIELLPVSEHPFSGSWGYQPVGMFSPTSRYGTADDFKYFVDQCHQAGIGVILDWVPAHFPSDAHGLARFDGTPLYEYEDPRRGWHPDWNSYIYDFGRNTVRQFLVASALFWLDKFHVDGLRVDAVASMLYLDYSRNAGEWVPNVDGGNHNYEAISLLKWTNEEVYGKYPHAMTIAEESTAFAGVSRPTFLGGLGFGFKWNMGWMHDTLTYMQKEPIHRRYHHNDMTFSMVYHYDENFILSLSHDEVVHGKHSMLYKMPGDEWQQAANLRAYMGFMYAHPGKKLNFMGTEIAQSNEWNHDAQLPWHLLQYPKHGGQQRLIHDLNHLYRHEAALYQADYEQNGFRWLDHNDADNSIFAWLRADKQGANPLVVACNFTPVPRLAYRLGVPAAGHYRVVLNTDSEHYWGSNYDVGLVFVAEPTPWQGMAHSIVLDLPPLATLFIKQES
>AP019193.1|BBG83543.1|759363_761505_+|glycogen-operon-protein-GlgX-homolog
MFAMEKGQDHPLGALLDETGCHFCVWAPQSDKVELCLFDEQERELARLELPGRRGQYRFGHVRGVKAGQRYGYRVHGTSQEGMLFDPDKLLIDPYAKALSRPTHWDDALYQGDSAAMVAKSVVVDDAFDWQGVGKLAIEPARTVIYETHVKGFTRQHQGVPSELRGTYLGICHPLIIEHLKSLGITSVQLMPVAAFMSEPRLEQLGLTNYWGYNPIAFFAPEPRYAAQEAVTEFKTMVRELHKAGLEVILDVVYNHTAESGFDGPMLSFKGFDNAGYYAFEAGAHGPDYTRHANVTGCGNSVNLDHPNSLRLVLDALRYWVTEMQVDGFRFDLAVTLAREAGEFDPMGAFFKAMMADPVLARVKLIAEPWDIGPFGYRLGQFPSQWLEINDRYRDTVRAFWRGDAGKMGDFATRLVGSRDLFPKNWRSPHTSVNYLCYHDGFTLEDLVSYNQRHNQANGEDNRDGHGNNLSNNHGVEGPTLDPRVNNLRQQQKRNLIATLLLSQGTPHFLAGDEMGRSQLGNNNAYCQDNQISWVNWQWRPEDERLLAFTQQMLALRAESTVFSNLQLSDDSWNGAPSSCHQVNWYHPDGHQLTDQDWHAPMGQAFAMDIGMIGCGGERWYVLFNASDYDIQFRLPPPGEGLEWIQTIDTATNDGLPFLPDDIKRQVAVGRAHSLKLLERVALSAVALAEEGVVATPDVAVVLPSGSQFPLAG
>AP019193.1|BBG83544.1|761561_761954_+|peptide-methionine-(R)-S-oxide-reductase
MSGNTPNPEQWRRQLSAEQYHVCWEKGTERPYSGALLHNRKSGDYLCVCCKQVLFHSDAKFDSGCGWPSFDRAIEGTVTYTEDGSHGMKRVEITCSQCGSHLGHVFPDGPTETGQRYCVNSLSLDFDPES
>AP019193.1|BBG83545.1|762034_763186_-|chorismate-binding-protein
MGQVFIQFLWLGCVSFGGPAAHIGYFQRTFVERLGWLTQAEFAQLLALCQLLPGPASSQLGFAIGRQRAGLAGALAAFAGFTLPSFLLLLAAAIGLGQLGNNVWLDAALHGLKLLALVVVADAVLTMSRQFCKTTRNQGIMVATAAALWWQPGLLTQLAMLAGAALLCARVGAPQTPGPQPSLAQSTPVHQPHWPTLLLFALLFVGLPLLGGPVGQLVADFYRAGSLVFGGGHVVLPLLAESVGHSLNPQQFLTGYSLAQLVPGPMFTLATYLGAQLLPASPMGGALLATLALFLPGFLLLWTMGPCWQSWLARPRLAGAVAGINAAVVGLLLAALYQPVWQSAVLAPTDLALAAIGFYLLRGLKLPILALATLLVVATLLLA
>AP019193.1|BBG83546.1|763423_763867_-|ADP-ribose-pyrophosphatase
MSTPYPRVGVGVILTNRQGQVLLGKRKGSHAPYWSIAGGHLELGETFESAAIREVAEETGFQISNPSVIAVTNNLETWRESGLHYVSVTLLAEVEGEPQLLEPEKCEGWVWCDPRNLPEPHFDASRQSIACWLANRCYLPTSSQPAP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: AP019193_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP019193_3

763842-763955

Orphan

Consensus_repeat	Method
CCGACGCGGGGATAGGGGGTAGACATAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of AP019193_3

>merge|AP019193|3|763842-763955|CRISPRCasFinder
CCGACGCGGGGATAGGGGGTAGACATAAAAAGAACTCCTTGCTGAGGGGGGGAATGGGTTGGTCAGGATCACTCTGTCATCGACCGCCGACGCGGGGATAGGGGGTAGACATAA

>AP019193|3|3|763842-763955|CRISPRCasFinder
CCGACGCGGGGATAGGGGGTAGACATAA	AAAGAACTCCTTGCTGAGGGGGGGAATGGGTTGGTCAGGATCACTCTGTCATCGACCG
CCGACGCGGGGATAGGGGGTAGACATAA

Protein	Signature genes	Signature genes Name	Protein_function
AP019193.1\|BBG83550.1\|766218_766446_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225562
AP019193.1\|BBG83544.1\|761561_761954_+\|peptide-methionine-(R)-S-oxide-reductase	unknown	unknown	gnl\|CDD\|376583
AP019193.1\|BBG83538.1\|751446_752520_+\|quinolinate-synthase-A	unknown	unknown	gnl\|CDD\|236489
AP019193.1\|BBG83552.1\|766998_767475_-\|AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
AP019193.1\|BBG83542.1\|757186_759364_+\|1,4-alpha-glucan-branching-enzyme-GlgB	unknown	unknown	gnl\|CDD\|235445
AP019193.1\|BBG83554.1\|767783_768404_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|225222
AP019193.1\|BBG83551.1\|766591_766909_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225653
AP019193.1\|BBG83555.1\|768570_769812_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340888
AP019193.1\|BBG83556.1\|770019_770841_+\|haloacid-dehalogenase	unknown	unknown	gnl\|CDD\|182523
AP019193.1\|BBG83539.1\|752590_753457_-\|D-hexose-6-phosphate-mutarotase	unknown	unknown	gnl\|CDD\|185697
AP019193.1\|BBG83545.1\|762034_763186_-\|chorismate-binding-protein	unknown	unknown	gnl\|CDD\|273350
AP019193.1\|BBG83543.1\|759363_761505_+\|glycogen-operon-protein-GlgX-homolog	unknown	unknown	gnl\|CDD\|131155
AP019193.1\|BBG83549.1\|765758_766184_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
AP019193.1\|BBG83540.1\|753572_754568_-\|glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|185323
AP019193.1\|BBG83548.1\|765169_765616_-\|organic-hydroperoxide-reductase	unknown	unknown	gnl\|CDD\|274649
AP019193.1\|BBG83553.1\|767592_767808_+\|hypothetical-protein	unknown	unknown	unknown
AP019193.1\|BBG83547.1\|764082_765087_-\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|176190
AP019193.1\|BBG83541.1\|754914_757104_+\|4-alpha-glucanotransferase	unknown	unknown	gnl\|CDD\|236831
AP019193.1\|BBG83537.1\|749200_751306_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
AP019193.1\|BBG83536.1\|746808_747618_+\|tol-pal-system-protein-YbgF	unknown	unknown	gnl\|CDD\|182745

Protein	Function_ID	Function_description	E-value
AP019193.1\|BBG83550.1\|766218_766446_+\|hypothetical-protein	gnl\|CDD\|225562	COG3017, LolB, Outer membrane lipoprotein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane].	0.00983786
AP019193.1\|BBG83544.1\|761561_761954_+\|peptide-methionine-(R)-S-oxide-reductase	gnl\|CDD\|376583	pfam01641, SelR, SelR domain. Methionine sulfoxide reduction is an important process, by which cells regulate biological processes and cope with oxidative stress. MsrA, a protein involved in the reduction of methionine sulfoxides in proteins, has been known for four decades and has been extensively characterized with respect to structure and function. However, recent studies revealed that MsrA is only specific for methionine-S-sulfoxides. Because oxidized methionines occur in a mixture of R and S isomers in vivo, it was unclear how stereo-specific MsrA could be responsible for the reduction of all protein methionine sulfoxides. It appears that a second methionine sulfoxide reductase, SelR, evolved that is specific for methionine-R-sulfoxides, the activity that is different but complementary to that of MsrA. Thus, these proteins, working together, could reduce both stereoisomers of methionine sulfoxide. This domain is found both in SelR proteins and fused with the peptide methionine sulfoxide reductase enzymatic domain pfam01625. The domain has two conserved cysteine and histidines. The domain binds both selenium and zinc. The final cysteine is found to be replaced by the rare amino acid selenocysteine in some members of the family. This family has methionine-R-sulfoxide reductase activity.	2.95803e-74
AP019193.1\|BBG83538.1\|751446_752520_+\|quinolinate-synthase-A	gnl\|CDD\|236489	PRK09375, PRK09375, quinolinate synthase NadA.	0
AP019193.1\|BBG83552.1\|766998_767475_-\|AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	3.22775e-48
AP019193.1\|BBG83542.1\|757186_759364_+\|1,4-alpha-glucan-branching-enzyme-GlgB	gnl\|CDD\|235445	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB.	0
AP019193.1\|BBG83554.1\|767783_768404_-\|transcriptional-regulator	gnl\|CDD\|225222	COG2345, COG2345, Predicted transcriptional regulator [Transcription].	1.50198e-53
AP019193.1\|BBG83551.1\|766591_766909_+\|hypothetical-protein	gnl\|CDD\|225653	COG3111, COG3111, Periplasmic protein with OB-fold [Function unknown].	0.00960974
AP019193.1\|BBG83555.1\|768570_769812_+\|MFS-transporter	gnl\|CDD\|340888	cd17330, MFS_SLC46_TetA_like, Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.14047e-41
AP019193.1\|BBG83556.1\|770019_770841_+\|haloacid-dehalogenase	gnl\|CDD\|182523	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional.	7.51279e-84
AP019193.1\|BBG83539.1\|752590_753457_-\|D-hexose-6-phosphate-mutarotase	gnl\|CDD\|185697	cd09020, D-hex-6-P-epi_like, D-hexose-6-phosphate epimerase-like. D-Hexose-6-phosphate epimerase Ymr099c from Saccharomyces cerevisiae belongs to the large superfamily of aldose-1-epimerases. Its active site is very similar to the catalytic site of galactose mutarotase, the best studied member of the superfamily. It also contains the conserved glutamate and histidine residues that have been shown in galactose mutarotase to be critical for catalysis, the glutamate serving as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. In addition Ymr099c contains 2 conserved arginine residues which are involved in phosphate binding, and exhibits hexose-6-phosphate mutarotase activity on glucose-6-P, galactose-6-P and mannose-6-P.	1.33364e-118
AP019193.1\|BBG83545.1\|762034_763186_-\|chorismate-binding-protein	gnl\|CDD\|273350	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family. Members of this family probably act as chromate transporters, and are found in Pseudomonas aeruginosa, Alcaligenes eutrophus, Vibrio cholerae, Bacillus subtilis, Ochrobactrum tritici, cyanobacteria and archaea. The protein reduces chromate accumulation and is essential for chromate resistance. [Transport and binding proteins, Anions].	3.06482e-67
AP019193.1\|BBG83543.1\|759363_761505_+\|glycogen-operon-protein-GlgX-homolog	gnl\|CDD\|131155	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
AP019193.1\|BBG83549.1\|765758_766184_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.50891e-20
AP019193.1\|BBG83540.1\|753572_754568_-\|glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|185323	PRK15425, gapA, glyceraldehyde-3-phosphate dehydrogenase.	0
AP019193.1\|BBG83548.1\|765169_765616_-\|organic-hydroperoxide-reductase	gnl\|CDD\|274649	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily. pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein Ohr, or organic hydroperoxide resistance protein. [Cellular processes, Detoxification].	2.85818e-57
AP019193.1\|BBG83547.1\|764082_765087_-\|NADP-dependent-oxidoreductase	gnl\|CDD\|176190	cd05288, PGDH, Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.	1.48054e-171
AP019193.1\|BBG83541.1\|754914_757104_+\|4-alpha-glucanotransferase	gnl\|CDD\|236831	PRK11052, malQ, 4-alpha-glucanotransferase; Provisional.	0
AP019193.1\|BBG83537.1\|749200_751306_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	2.27242e-64
AP019193.1\|BBG83536.1\|746808_747618_+\|tol-pal-system-protein-YbgF	gnl\|CDD\|182745	PRK10803, PRK10803, tol-pal system protein YbgF; Provisional.	1.02163e-63

>AP019193.1|BBG83545.1|762034_763186_-|chorismate-binding-protein
MGQVFIQFLWLGCVSFGGPAAHIGYFQRTFVERLGWLTQAEFAQLLALCQLLPGPASSQLGFAIGRQRAGLAGALAAFAGFTLPSFLLLLAAAIGLGQLGNNVWLDAALHGLKLLALVVVADAVLTMSRQFCKTTRNQGIMVATAAALWWQPGLLTQLAMLAGAALLCARVGAPQTPGPQPSLAQSTPVHQPHWPTLLLFALLFVGLPLLGGPVGQLVADFYRAGSLVFGGGHVVLPLLAESVGHSLNPQQFLTGYSLAQLVPGPMFTLATYLGAQLLPASPMGGALLATLALFLPGFLLLWTMGPCWQSWLARPRLAGAVAGINAAVVGLLLAALYQPVWQSAVLAPTDLALAAIGFYLLRGLKLPILALATLLVVATLLLA
>AP019193.1|BBG83544.1|761561_761954_+|peptide-methionine-(R)-S-oxide-reductase
MSGNTPNPEQWRRQLSAEQYHVCWEKGTERPYSGALLHNRKSGDYLCVCCKQVLFHSDAKFDSGCGWPSFDRAIEGTVTYTEDGSHGMKRVEITCSQCGSHLGHVFPDGPTETGQRYCVNSLSLDFDPES
>AP019193.1|BBG83543.1|759363_761505_+|glycogen-operon-protein-GlgX-homolog
MFAMEKGQDHPLGALLDETGCHFCVWAPQSDKVELCLFDEQERELARLELPGRRGQYRFGHVRGVKAGQRYGYRVHGTSQEGMLFDPDKLLIDPYAKALSRPTHWDDALYQGDSAAMVAKSVVVDDAFDWQGVGKLAIEPARTVIYETHVKGFTRQHQGVPSELRGTYLGICHPLIIEHLKSLGITSVQLMPVAAFMSEPRLEQLGLTNYWGYNPIAFFAPEPRYAAQEAVTEFKTMVRELHKAGLEVILDVVYNHTAESGFDGPMLSFKGFDNAGYYAFEAGAHGPDYTRHANVTGCGNSVNLDHPNSLRLVLDALRYWVTEMQVDGFRFDLAVTLAREAGEFDPMGAFFKAMMADPVLARVKLIAEPWDIGPFGYRLGQFPSQWLEINDRYRDTVRAFWRGDAGKMGDFATRLVGSRDLFPKNWRSPHTSVNYLCYHDGFTLEDLVSYNQRHNQANGEDNRDGHGNNLSNNHGVEGPTLDPRVNNLRQQQKRNLIATLLLSQGTPHFLAGDEMGRSQLGNNNAYCQDNQISWVNWQWRPEDERLLAFTQQMLALRAESTVFSNLQLSDDSWNGAPSSCHQVNWYHPDGHQLTDQDWHAPMGQAFAMDIGMIGCGGERWYVLFNASDYDIQFRLPPPGEGLEWIQTIDTATNDGLPFLPDDIKRQVAVGRAHSLKLLERVALSAVALAEEGVVATPDVAVVLPSGSQFPLAG
>AP019193.1|BBG83542.1|757186_759364_+|1,4-alpha-glucan-branching-enzyme-GlgB
MLVERLVAARCSDPFSHLGLQANPDGPGLKLTVWLPDAQAVRVRDLKSGKIVATLAPTDDSGLFETVFTRRKNPFPYQLLADYPDATVEVIDPYQFQDAGWAGLAELTYQPENLYHTLGAQLRTVAHLDQQVEGVRFAVYAPSATAVSLIGDFNFWDGRRHPMQRSQCGHWVLFVPGLKAGDRYKFELKDPAGNRLPHKSDPVGFYCEQYPSFASVVYDHDQYQWQDAAWRESQLNDKREQPLSIYELHVGSWKRHPNGDSLSWRELAVELVDYVKGMEYTHIELLPVSEHPFSGSWGYQPVGMFSPTSRYGTADDFKYFVDQCHQAGIGVILDWVPAHFPSDAHGLARFDGTPLYEYEDPRRGWHPDWNSYIYDFGRNTVRQFLVASALFWLDKFHVDGLRVDAVASMLYLDYSRNAGEWVPNVDGGNHNYEAISLLKWTNEEVYGKYPHAMTIAEESTAFAGVSRPTFLGGLGFGFKWNMGWMHDTLTYMQKEPIHRRYHHNDMTFSMVYHYDENFILSLSHDEVVHGKHSMLYKMPGDEWQQAANLRAYMGFMYAHPGKKLNFMGTEIAQSNEWNHDAQLPWHLLQYPKHGGQQRLIHDLNHLYRHEAALYQADYEQNGFRWLDHNDADNSIFAWLRADKQGANPLVVACNFTPVPRLAYRLGVPAAGHYRVVLNTDSEHYWGSNYDVGLVFVAEPTPWQGMAHSIVLDLPPLATLFIKQES
>AP019193.1|BBG83541.1|754914_757104_+|4-alpha-glucanotransferase
MTTLIEQLAAAKGIASEYVDAWGHPAQVSEESKAAMLGAMGYRVDDEAALTAQLEQEHRQHWLRALDPVMVVRSGEPITLEVRLPIEFVNDALSWQLKLEQGGLLSGQLTPIDGELVGVAEFEEMECQAYRVALAVQPELGYHDLILLEEGNDEPLASMRLIVAPKACYKQPPIANGRKVWGPSVQLYCLRSRHNWGIGDFSDLGQLVEKMAAWGAHFVGLNPIHALYPANPESASPYSPSSRRWLNVAYIDVEAVPEFLANARLKAEVANPAFQQHLSELRAKGNVDYTGVIETKLGMLRQVFDQASLCAERQAAFDAFVAAGGDSLQQQAAFDALQAHFYAKGENAWGWPVWPEPFRDYHNPEVAAWMAEHSQDVNFYLYLQFLADEQLARADARAKAAGMVMGIYRDLAVGVSEGSTEIWANRDLYCPKASVGAPPDILGPLGQNWGLPPMNPNQLFEAAYQPMVDLFRANMRSCGALRIDHVMALLRLWWVPPGESAAKGAYIYYPVNDLLGILALESHRNQCLLIGEDLGTVPEGIDVTLKENGVHSYKVFFFERSKGDGGFISPAHYAEQAMSALTTHDMPTLKGFWHCDDLALGRELGLYPDEDVLKTLYADRHQAKQRILDSLHGHGVISGNISHDVNWVGMNTELNHGLQLHMSRGSCALFSTQLEDWLEMDKPVNVPGTSYEYPNWRRKLSTDLEDIFANEALKALAGKMSQARDEASR
>AP019193.1|BBG83540.1|753572_754568_-|glyceraldehyde-3-phosphate-dehydrogenase
MTIKVGINGFGRIGRFVFRLAAERADIEVVGINDLIDVDYMAYMLKYDSTHGRFKGTVEVKDGNLVVNGKTVRVTAERDPANLKWGEIGVDVVAEATGLFLTDETARKHIAAGAKKVVLTGPSKDATPMFVMGVNDATYAGQDIVSNASCTTNCLAPIAKVLNDTFGIESGLMTTVHATTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGVVIPELKGLLTGMAFRVPTPDVSVVDLTVNLKKAATYAEICEAMKAASEGAMKGVLGYTEDEVVSTDFLGERQTSVFDAKAGIQLNDKFVKVVSWYDNEMGYSSKVLDLIAHISK
>AP019193.1|BBG83539.1|752590_753457_-|D-hexose-6-phosphate-mutarotase
MQPTRSLTAHCTLSHHPAGQPLLTVDNGYAKAQISLFGAHVLSYQRHDEPASIWLSDKAVLDGSKPIRGGIPLCWPWFGPAPARVGSGKPSHGFARTSLWTLDGVSDHGDGTLVHLSLRDNEATRQLWPHAFELELDVLVGKELALVLTTRNTGKAPLVYSGALHTYLQISSPESVSVSGLGEPYADKLSGQNGQQQGPLTLNGPLDRVYWQPAAHVSIQDGERETRVVSGNHDSMVVWTPWIEGATAMADMSDDGYRTMLCVEAAIASEAGVTVAPDEEHSFSTVII
>AP019193.1|BBG83538.1|751446_752520_+|quinolinate-synthase-A
MSNALNNVPPVVEMDYPFPAKPLPLSAEQKTTLIADIKALLKERKAVLVAHYYTDPEIQALAEETGGFVGDSLEMARFGRDHEAQTLIVAGVRFMGETSKILSPHKRVLMPTLEAECSLDLGCPIEQFSAFCDAHPDHIVVVYANTSAAVKARADWVVTSSIALEIVEHLDSQGHKIIWGPDRHLGAYIEKKTGAEMLRWQGHCIVHDEFKARALRELKEQNPDAAVLVHPESPASVIDLADAVGSTSQLIKAAKELPQQKLIVATDRGIFYKMQQACPEKEMVEAPTGGDGATCRSCAHCPWMAMNGLVAIKEALTDGAERHEILVDEALRVKALIPLDRMLNFAAELRLKTQGNA
>AP019193.1|BBG83537.1|749200_751306_-|methyl-accepting-chemotaxis-protein
MKQRSLKTKLLLLTMGLFLASGLAMTLMQSSSLNTLRSNIVSQTRQALEQEVSRTLQFQAERYAVQIADLLQQSYQVPLGMAAQLEGSMAQPDRLLSRPQVETLLHSRLQQAGGISSIYAQFEPDGYDGQDASWQAGAPHSVVGKGSLEIYFTRDQGGQISQQPVDAATSAAKYDTSVNEFGIRNSEWYLCGRDTLRPCLMEPYLYEISPGNKMLMTSLTVPVLKAGKFVGITGVDMNLPIFQQLAENLGKSLYDNQAEVTLVSKMGLIVGSNRHADKLGRPLTEAGLTAPTGQEQDTETDFILQQPVRIDAADTQWWLMLKVPKALALSQANTISNQLGDLLQATQQQQLIAIVVITLLALALLIWFIQTITAPLSLISRHVSHLSSNEGDLTQQMRIDTHQELIELGGHLNAFLGKLRGMVQGSKQIGQQVHQQAQGMKQTADTMRSSLDEQSLELESVVSAMHQMSTTAVSVAGYAEQAAQESETATHHISTAQQTLSRARTEIHTLVEDMHLADKAVAQVAQRSTNISRILDVIRAIAEQTNLLALNAAIEAARAGDMGRGFAVVADEVRALANKTRESTDEIGQLIGSLQTEVSSSQQLMSTGITRSASTVEGTEQAFEALNQVVTQIQQIHDHISQVATAAEQQSAVSDTINQNLMRIGDAATTLGQEANASHHLSEQLEQAATALATQLDRLRT
>AP019193.1|BBG83536.1|746808_747618_+|tol-pal-system-protein-YbgF
MKSVYKQAVVALAVLVALNAQAAAPVSDLSGDSGGGVVLSGNNGAIVPTGSLEDRVALLERTLNARLRLQAELQQQVDSLQGEVSELRGQLEQQTYQMEQSQERQRQLYQELDKVANSQPAAAPAAPAAAAASATPAAAANYSTNLNENQAYDAAVNMVLKEKNYDKAIPAFEGFIKQYPSSSYVPNAHYWLGQLLFNKGDRTGAAAQFTTVATKFSKSPKRADALLKLGMLAQLDGKKAEAKNFYEQVIKGYPNTSPAQLAKQSLSKL
>AP019193.1|BBG83547.1|764082_765087_-|NADP-dependent-oxidoreductase
MNQSSHQIQLLRRPVGLPSLADFTLTEVALPELQAGEVRVANQWLSVDPYMRGRMSEAKSYVPPFPLNGPLDGGAIGVVEASRHPDFAVGDRVSSMLGWRDRFVANGAQLTRLPDTRLPPQLFLGALGMPGMTAWTGLNRIAKLQAGETVLVSAASGAVGSMVVQLAKRAGARVIGSTGSPDKVAYLKSLGADEVINYRETPDLDAELARLAPDGIHVYFENVGGAMLDAALNHMVVHGRIVMCGLIEQYNGQSEASGPRNLSQVIRKRLTMQGLIVFDHWQHYGEFLAEVTPAFDAGTLQAEETVYQGLASMPQAFIGLFEGRNTGKMLVKLA
>AP019193.1|BBG83548.1|765169_765616_-|organic-hydroperoxide-reductase
MKTLYRTQAIAQAGRNGEVHTLDNSLQLALALPTALGGNGKGNNPEQLLAAGYAACFSNALIHVAHKLGAPLSSAPVTAGVELLALDDGRFNFAITLDVALAATQPEQAAQAEQIVRLAHQTCPFSNAMRGNVVTRLRLNGAPLDETA
>AP019193.1|BBG83549.1|765758_766184_+|MarR-family-transcriptional-regulator
MSELKKQVCFALYSASNAVMRAYRPLLDKLDLTYTQYLVMLSLWARDEVSLKEIGQETGLDAGTLTPIVKRLESKGWLTRTVSSEDERQKCIGLTEAGRQLQQEVRECCLADNLRNQVDLADAELAQLKQLCDRISAQLGR
>AP019193.1|BBG83550.1|766218_766446_+|hypothetical-protein
MKLLLPLFALLLTACSAGSHAPSMAIDDADAWQAICKDGTRVRAVVEEGICADHRGVAMWTNKPRAARMAEEAAK
>AP019193.1|BBG83551.1|766591_766909_+|hypothetical-protein
MQSSLVGLSILWGLASFGVQGDFIESRDSVAPSWQAESRVEMEGYLIESLGEDRWLFDNGSESLLVSLPQGQWVPTGERLRVSGEPQQEQAGWLLQVQDVSQVAV
>AP019193.1|BBG83552.1|766998_767475_-|AsnC-family-transcriptional-regulator
MLKLDRIDRHILELMQENGRISNLELAELVGLSPSPCSRRVKALEDAGLIDTHVTLLNARQLGLTLTAYIHISMDRHTPERFENFDRAISELPEVLECDLITGNDADYQLKVVVRDMEHYQHFLLDKLTHIPGVTGVRSSFVLRRIKHKTALPLNHLG
>AP019193.1|BBG83553.1|767592_767808_+|hypothetical-protein
MVTSSGGKTETQPGLCGEGPYRVNNPISRLTLSGNDGLEREHPLPEGNKAGIPAPALLFLAFADQGCGLMR
>AP019193.1|BBG83554.1|767783_768404_-|transcriptional-regulator
MNASTDKILFLLKSHGPQSAAELGEQLQMTSMGARQHLMTLEADGWVSFNDEARGRGRPVRLWHLTEQAWQRFPDSHSELTLQLIDNIQQLFGEVGMARLIAQREQQQLARYQAELTQPALADRLAALTAQRTREGYMADFRQEEDGSWLLWESHCPICAAARACRGFCRSELEMFRRLLAPAGVEREQYLLEGDHRCLYRIRPQP
>AP019193.1|BBG83555.1|768570_769812_+|MFS-transporter
MDGIKGQASLWVLVMTVTLAVAGFSLPSPVLAPLMLDPAQGMLTPAASDWSRKVWLGVIMGLYPLFQLVGAPWLGKLSDRHGRKPVLTLCLVGVLVGYALMALGIAWRSLPLLLLSRVVEGFFNGDIAIVQAMAADMSTAKTKARSFAWINIGMNLGWVVGPMIGGYAAVVSGDYSLAAWLAVAMTLVNLLLVLWLLPNRPAAARSEQPPPALSSRQLLLQPALLPYFVLTLLSYGAVQLYFTYFNVWLVERLAWDPVQLAQAAVLVSVPMILGSWLGSRLARHWRGSSLGVVGHLVMAAGMLMFVLPGHWWGLALTFIPTGIGMSLGELATSVAVSNRSHAEQQGQAMGLYRGLAVGSEILAVVVGSLVLLAGTEWPFYLAALCSLLCAIGFYGLRRAADRRQRLDVQVEAG
>AP019193.1|BBG83556.1|770019_770841_+|haloacid-dehalogenase
MSRFQAIALDMDGTLLTRDHKISSATRAALAQARAHGIKVLLVTGRHFMTARPFHHELALDTPIICSNGAYLYDPVQEQILTGDPLAVAPLSRLLAEVQAHQMGALFHLDEGIGYLGCEEHVTRMRHWSATQPDHLKISLLPAEDLASWLSRPVWKLELFNQDPALLHHFMAEVVEQLPFTRDWAAPYAVELVQPGCSKGNRLAQWAASEGIAMENVVAFGDNNNDISMFEQVGLAVAMGNAASQIQALADRVTADHNEDGIALALQRWVLPA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: AP019193_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP019193_4

949808-949913

Orphan

Consensus_repeat	Method
GCGGGCGATGGCAGCTGGAAACTGGTGTGCAG	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of AP019193_4

>merge|AP019193|4|949808-949913|CRISPRCasFinder
GCGGGCGATGGCAGCTGGAAACTGGTGTGCAGTTACTGAGTTGTCCAGGCTGCTGTACCAGCAGCGAGCTCAGAGCGGGCGATGGCAGCTGGAAGCTGGTGTGCAG

>AP019193|4|4|949808-949913|CRISPRCasFinder
GCGGGCGATGGCAGCTGGAAACTGGTGTGCAG	TTACTGAGTTGTCCAGGCTGCTGTACCAGCAGCGAGCTCAGA
GCGGGCGATGGCAGCTGGAAGCTGGTGTGCAG

Protein	Signature genes	Signature genes Name	Protein_function
AP019193.1\|BBG83704.1\|938694_939363_-\|opacity-associated-protein-OapA	unknown	unknown	gnl\|CDD\|282128
AP019193.1\|BBG83711.1\|952168_952576_-\|biopolymer-transporter-ExbD	unknown	unknown	gnl\|CDD\|376792
AP019193.1\|BBG83713.1\|953181_954555_-\|biopolymer-transporter-ExbB	unknown	unknown	gnl\|CDD\|376576
AP019193.1\|BBG83700.1\|934452_935334_-\|phosphatidylserine-decarboxylase-proenzyme	unknown	unknown	gnl\|CDD\|234591
AP019193.1\|BBG83698.1\|933948_934200_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371406
AP019193.1\|BBG83716.1\|958720_959746_+\|microcin-C-ABC-transporter-permease-YejB	unknown	unknown	gnl\|CDD\|226642
AP019193.1\|BBG83701.1\|935353_936433_-\|putative-ribosome-biogenesis-GTPase-RsgA	unknown	unknown	gnl\|CDD\|237039
AP019193.1\|BBG83703.1\|938212_938422_-\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
AP019193.1\|BBG83705.1\|939461_941564_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
AP019193.1\|BBG83709.1\|950269_951505_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
AP019193.1\|BBG83707.1\|944168_946313_-\|nuclease	unknown	unknown	gnl\|CDD\|225249
AP019193.1\|BBG83712.1\|952643_953171_-\|biopolymer-transporter-ExbB	unknown	unknown	gnl\|CDD\|376576
AP019193.1\|BBG83706.1\|941824_943240_+\|glutamate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234953
AP019193.1\|BBG83718.1\|960867_962685_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173862
AP019193.1\|BBG83710.1\|951516_952152_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|367555
AP019193.1\|BBG83715.1\|955426_957982_-\|outer-membrane-protein	unknown	unknown	gnl\|CDD\|366183
AP019193.1\|BBG83714.1\|954551_955316_-\|DUF3450-domain-containing-protein	unknown	unknown	gnl\|CDD\|378764
AP019193.1\|BBG83702.1\|936479_937025_+\|oligoribonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|235429
AP019193.1\|BBG83717.1\|959748_960786_+\|peptide-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226690
AP019193.1\|BBG83699.1\|934204_934456_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378300

Protein	Function_ID	Function_description	E-value
AP019193.1\|BBG83704.1\|938694_939363_-\|opacity-associated-protein-OapA	gnl\|CDD\|282128	pfam04225, OapA, Opacity-associated protein A LysM-like domain. This family includes the Haemophilus influenzae opacity-associated protein. This protein is required for efficient nasopharyngeal mucosal colonisation, and its expression is associated with a distinctive transparent colony phenotype. OapA is thought to be a secreted protein, and its expression exhibits high-frequency phase variation. This is a LysM-like domain.	3.72636e-11
AP019193.1\|BBG83711.1\|952168_952576_-\|biopolymer-transporter-ExbD	gnl\|CDD\|376792	pfam02472, ExbD, Biopolymer transport protein ExbD/TolR. This group of proteins are membrane bound transport proteins essential for ferric ion uptake in bacteria. The Pfam family consists of ExbD, and TolR which are involved in TonB-dependent transport of various receptor bound substrates including colicins.	6.02811e-31
AP019193.1\|BBG83713.1\|953181_954555_-\|biopolymer-transporter-ExbB	gnl\|CDD\|376576	pfam01618, MotA_ExbB, MotA/TolQ/ExbB proton channel family. This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.	1.33103e-31
AP019193.1\|BBG83700.1\|934452_935334_-\|phosphatidylserine-decarboxylase-proenzyme	gnl\|CDD\|234591	PRK00044, psd, phosphatidylserine decarboxylase; Reviewed.	0
AP019193.1\|BBG83698.1\|933948_934200_-\|hypothetical-protein	gnl\|CDD\|371406	pfam11173, DUF2960, Protein of unknown function (DUF2960). This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.	7.8678e-37
AP019193.1\|BBG83716.1\|958720_959746_+\|microcin-C-ABC-transporter-permease-YejB	gnl\|CDD\|226642	COG4174, COG4174, ABC-type uncharacterized transport system, permease component [General function prediction only].	2.52991e-104
AP019193.1\|BBG83701.1\|935353_936433_-\|putative-ribosome-biogenesis-GTPase-RsgA	gnl\|CDD\|237039	PRK12288, PRK12288, small ribosomal subunit biogenesis GTPase RsgA.	0
AP019193.1\|BBG83703.1\|938212_938422_-\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	2.092e-30
AP019193.1\|BBG83705.1\|939461_941564_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	2.78542e-71
AP019193.1\|BBG83709.1\|950269_951505_-\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	2.16402e-05
AP019193.1\|BBG83707.1\|944168_946313_-\|nuclease	gnl\|CDD\|225249	COG2374, COG2374, Predicted extracellular nuclease [General function prediction only].	5.49113e-116
AP019193.1\|BBG83712.1\|952643_953171_-\|biopolymer-transporter-ExbB	gnl\|CDD\|376576	pfam01618, MotA_ExbB, MotA/TolQ/ExbB proton channel family. This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.	1.67289e-18
AP019193.1\|BBG83706.1\|941824_943240_+\|glutamate--tRNA-ligase	gnl\|CDD\|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
AP019193.1\|BBG83718.1\|960867_962685_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173862	cd08497, PBP2_NikA_DppA_OppA_like_14, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	1.12149e-173
AP019193.1\|BBG83710.1\|951516_952152_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	1.65275e-16
AP019193.1\|BBG83715.1\|955426_957982_-\|outer-membrane-protein	gnl\|CDD\|366183	pfam00593, TonB_dep_Rec, TonB dependent receptor. This model now only covers the conserved part of the barrel structure.	1.52759e-38
AP019193.1\|BBG83714.1\|954551_955316_-\|DUF3450-domain-containing-protein	gnl\|CDD\|378764	pfam11932, DUF3450, Protein of unknown function (DUF3450). This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are about 260 amino acids in length.	5.61296e-95
AP019193.1\|BBG83702.1\|936479_937025_+\|oligoribonuclease	gnl\|CDD\|235429	PRK05359, PRK05359, oligoribonuclease; Provisional.	2.54953e-129
AP019193.1\|BBG83717.1\|959748_960786_+\|peptide-ABC-transporter-permease	gnl\|CDD\|226690	COG4239, COG4239, ABC-type uncharacterized transport system, permease component [General function prediction only].	1.06708e-107
AP019193.1\|BBG83699.1\|934204_934456_-\|hypothetical-protein	gnl\|CDD\|378300	pfam09905, VF530, DNA-binding protein VF530. VF530 contains a unique four-helix motif that shows some similarity to the C-terminal double-stranded DNA (dsDNA) binding domain of RecA, as well as other nucleic acid binding domains.	5.52254e-47

>AP019193.1|BBG83707.1|944168_946313_-|nuclease
MKGTRTLLSLAVGLALASPSVYAAGFSCPADNALTPIPVIQGSGDKSPLIPADKFESPQSVMVKAVVSGLGESLNKGFYLLDVQGDGNPQTSDGIFVFLNDKNFASKYPDIKPGAEVCLEAKVEEYYNHTQLKPVFDSGTPRLQVVAQGSVPAAIPLRVLENETLARALERHEGMRVRLDADSALKISRNFSYDYAARRNNLVLSHQAPLMKPTQLHDADSKAAKALAKANAGNRVFLESDFKAADGKLPWLPAWEPEQGYLRIGDAPVNLDAMVGYSYNEYRLIVPQDQVITAGDLLRTSDNDRQSAPARADGTDLRVGSFNVLNYFTSHSSVGGALNVLCKDQADADSAKGCNRGAKNLEDFQKQRAKIVNAITEMDADLLGLMEMENNGFDSHSAISDLVQALNAQQKEAGKQYAFVTLPKALLQGEHYFGGDAIMVAMIYRPAKLAPQGDANVITLPVQKYLDAKGVEKQASQRDSLVQTFTVEGSKDPLTLVVNHLKSKGSGCLENLDGKEPADLQGKCTEFRVSAAKVLGDAVSKLPGQVLLVGDFNSYAREDAIRVLTDYVPTDGQRKIVSASQTFLGDQVFEQTGSEVAKSYGLVDMNVKFNKEKAISYSYEAELGTLDYALANPALAGKVIAVADWHINSFESNLFEYGRDFTGDMIKSDNPFSASDHDPIIVDLKLKEESNGGGGAMGALLLALLPLAWRRRHG
>AP019193.1|BBG83706.1|941824_943240_+|glutamate--tRNA-ligase
MKVKTRFAPSPTGFLHVGGARTALYSWLFAKNQGGEFVLRIEDTDLERSTQEAIDAIIEGMEWLELNWDEGPYYQTKRFDRYNGLIDEMLADGRAYKCYCSKERLEALREGQMANGEKPRYDGKCRDHAHDHPADAPHVIRFRNPTEGSVVFDDHVRGRIEFANTELDDLIIRRTDGAPTYNFCVVVDDWDMEITHVVRGEDHINNTPRQINIYKALNAPVPEFAHVSMILGDDGAKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEIFSLEEMIKLFSLDAISKSASAFNTDKLLWLNNHYMRSLDPAYVAKHLAWHMENQKIDTSKGPALADVVTLLAERCNTLVEMAAQSRYLFEEYEAIDEAAAKKHLRGVAAEPLTLAKAKLAALDSWTTEALHELIEATAAELGQGMGKVGMPLRVAVTGLGQSPGIDAVMALVGKERVLARIDRALAYIEARMAAE
>AP019193.1|BBG83705.1|939461_941564_-|methyl-accepting-chemotaxis-protein
MQFRSIQNRILVMAGIAMTAALVILILLNQYSGQQTQKLTISSSRAALQQEAWQKVSANARAEAATITQLLQKGLSYTQQMASALALQQEGKLPLDRQQATDLLKAQLALEPQLYGAFAGFEPNGFDGQDASFAGQTALGSDSKGRFVPYFYRDKESIGTDLLLSIEKSDPDEFGNPANDYYACPKREGRSCLIDPFKVDINGQQVLVSTITTPIMVGGQFKGIAALDLAVDSISRQAQSLNSNIYDGKGETLIVSAAGVITGTSGDASLLGSRADKLLGNGWQQYLKPEVQRQELDDAFRISVPIAVPGMSRNWAIIVTLPYKVVLAGADQLEAQLSDMNRAAMTQQLVGAVVVLVLALATMLVIARSITGPIRQMVSLVDDIADGEGDLTKRLNTQSRDELGDLAKGINRFIDKLQVLLGDVLKTASEVNRHAGDTDRIAGQTDTNLQHHQAEMEQMLTAVQEMSYVSQEVATHANNTADSAKQAQGAADQGKVRFQQVIQSMHKVAAEAGKGAEVVEGLAHDSEQITSILTVIQGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAGNTQQAVQNTQELIEKIRHSSANAVNAINQSQQLTHQAVGEADLAEEALGSIYQAISTINDMTYQIASAAEEQSSVSETVSGNLSKTNALANDIALDATETAKASQALRQAAERLQQLLGQFRLS
>AP019193.1|BBG83704.1|938694_939363_-|opacity-associated-protein-OapA
MPTPDRRPRGHNRRAQQRRQDESQGSLLHRINAATLPLRQRIGQGMSGLGQRGQEAKTGKFKLASPLPRKHTIGLLILIPLWLLVLAWEPAVPAPKAAPSGSLAVPIAVPAQALTVGNGAAGSAPAAAKPVEEKVDGTWLQHDVQAGETLYSIFRKFELPGAELSRLIAIEGPDRPLTRLQSGRAVFILIDDTRRIQRVEIRSYGQAIYRYDRQGEGFALKE
>AP019193.1|BBG83703.1|938212_938422_-|cold-shock-protein
MSDIRTGQVKWFNETKGFGFIEQSQGPDVFVHFSSIQSAGFKTLAEGQKVQFTVTQGKKGPQAENVTLL
>AP019193.1|BBG83702.1|936479_937025_+|oligoribonuclease
MTVSAQNLVWIDMEMTGLDPEQNVVLEIATIVTDKDLNVLAEGPVIAIHQSDEELGKMDDWNVNTHTNSGLVARVKASQHDEAKAVAETLEFIRQWVPERTSPLCGNSIGQDRRFMVKHMSELEAFFHYRNVDVSTIKELVRRWQPALLDQFKKSGTHQALDDIRESIAELQFYRSHVFKI
>AP019193.1|BBG83701.1|935353_936433_-|putative-ribosome-biogenesis-GTPase-RsgA
MYHTGFGSVHKLANRVAKKAKLNLGQQRRVQANRERRLQKEHTTVVDDTLFGPAIEGVVISRFGQHADVEASDGAIHRSNLRRSSISSLVCGDKVVWRPGLNAATAGVIEAVHPRHSVLTRPDFYDGVKPIAANIDQIIIVSAVMPEFSTNIVDRYLVAAEDVEIRPLIVLNKVDMLDDAARARIERQLETYRKLNYEVLLVSCESGEGLDELKAKLTDKISIFVGQSGVGKSSLTNALMPGLDVLTGEISENSGLGQHTTTTARLYHFPSGGDLIDSPGIREFALWHLEADRITWCFVEFRDYLGGCKFRDCTHKDDPGCALRAAVDSGAISADRFHNYHRILETMQEARHGRQQARL
>AP019193.1|BBG83700.1|934452_935334_-|phosphatidylserine-decarboxylase-proenzyme
MMNMSITDNLKIAGQYCLPKHALSRLVGKLAAAEAGNLTTRVIEAFIKQYQVDMSEALHESPAHYKSFNEFFTRELKPGIRPLVEDAMTLALPVDGTVSQLGPIQQGRIIQAKGHDYSARELLGGYEDLVAPFKDGDFATIYLAPKDYHRIHMPLDGVLESMVFVPGDLFSVNPLTAENVPNLFARNERVVATFRTPHGPMALVLVGATIVASIETIWAGNIAPTKEKRVVRWDYSGDEAITLQKGAEMGLFKLGSTVVCLFGPGMLAGFEPHLANGVTTRMGQPFAKLAAQA
>AP019193.1|BBG83699.1|934204_934456_-|hypothetical-protein
MSEQPNASQKNNPLHGLTLEAIVTALVEHYGWEELGQQINIRCFTHEPSVKSSLKFLRKTPWAREKVESLYLYVQRKQAKSKE
>AP019193.1|BBG83698.1|933948_934200_-|hypothetical-protein
MAFKITYTYKKQAKTIGYANDKFNSIYDAVAAAEGIDLASFHAMEEQLAQVCRRDKKSVKDYRENYFKELGFSNIVIERDAKE
>AP019193.1|BBG83709.1|950269_951505_-|hypothetical-protein
MKKLHTLILAPVAMAVLLSTAGWAAEQPALSDRAYRAVNKAQALITEKKYGEANAKLQEALSGAGERVYDKGVILQTLGFVAAQQEKYGQATKYFADAIATGGLPQPVAQQVRYNLAQLYMAEGNFKASISTMNQWFASLGKDEKPTPHAYITLANAHVQLKQYREAIPAVDNAIKLSAGKAPESWYLLKMAAHYELKQYKPATEVLTALVDRYPEKKKYWTQLSAMHMQAGNDGKALAALEGAYNLGMLTEAAELQRLANYLAFAGIPHRAARVMEKAMKEGTIESNAANYKALANYWHQAKELDPAIDTLAKSYKLAPNAELQLKMARMMIQSKRYQDLVALAAKPAANASGEQRADLKFLTGVAYFEQQKPKEALSAFTQAAQNGNVSGRASPWISFLKEQQGGAVTQ
>AP019193.1|BBG83710.1|951516_952152_-|sugar-ABC-transporter-substrate-binding-protein
MRYLISLAVSCVVVFFLFLGMNKLITPDHRELVEKEDVSMTDFIRIKPQETLQERQRELPKPPPPKRPPPPPEMEVASTDRPQMESSPMDMPKLDIPVNIGGGNALGAYSTGGGGGGMGGNNGAIPLATFEPMMPRKAALAGLASGKVLVEFTVTERGTVSNVRIVKEDPRSYDLGKEARKTIAKWTFKPAMVDGKPQATRMQQEIEFAVN
>AP019193.1|BBG83711.1|952168_952576_-|biopolymer-transporter-ExbD
MRKRHSDSSADEAAIDLTPMLDIVFIMLIFFIVTTSFVKESGVEINRPSASTAETVKKGNIMVAVRENGQVWVDKRIVEVGAVRANIERLRAENPESAVVIQADTESRSGLVVQVMDQIRMAGVQNISIAASKSS
>AP019193.1|BBG83712.1|952643_953171_-|biopolymer-transporter-ExbB
MWFWLIEEVESVRRFLGLGGDVLVALFFLTLMMWALLLERWIYFMAVYPKQVKQTKAAWLARSDHLSWSAKQIRRELVSRVAMAVDKGMPVIKVLIALCPLMGLLGTVVGMVQVFDTLAITGTGSPRAMASGISKATVPTMAGMIAALSGLFFVNQLDHKAKLAVEKLEDNLKHG
>AP019193.1|BBG83713.1|953181_954555_-|biopolymer-transporter-ExbB
MKGIKLAIASLIAGATLITLPVTAAEKPVDLNALLNQVKAASTTESQLNKEREARFLADKNEQAALLAKAKAELAAETAKGERLKATFDANDKQLTELTETLRQRAGNMGEMFGVLRQFAGEFKGIFNASARRVEHPEQTALLTRLAESKELPSSDDLTAFWTTTLSRMVDGGKVSQIPATVVYGEGNQAEKTVTQIGEFNTVSEGKYLTFVPETGKFEQLPRQPDKGVLEPIAEFEQGGGGVKPIFVDPSRGVILSLLVQSPTLKERIDQGGEVGYVIMVLGVLGTLLALFCGARLSLIGGSMRKQLKSDQIIKGNPIGEMLGAYQSHRGDNIEDLESKLDEIILRNVPKFEKGISIIKLIASVAPLLGLLGTVVGMIATFQAITLFGTGDPKLMAGGISEALVTTMQGLVVAVPMLFLYTIVQTQSRRLIQVLEEQSAGFVARYQERLHASKAAA
>AP019193.1|BBG83714.1|954551_955316_-|DUF3450-domain-containing-protein
MKKALLGSLVSAALLTSFNLSAASASQAVDAQAATDNASKVSQQKIDNYADSAESALAQYKAALRQVDSLRTYNEQVGKMVDSQSSELASMQRQIAQIDQTSTEVVPLMLKMIDSLEQFVALDLPFQKVEREDRVAALTDLMNRADVTISEKYRKILEAYQIEEGFSRTIESYKASLAKDGGEKTYEFLRVGRIALLYQSPDGNETGMWNKKTRQWEELPQEYRSAVEQGLRIAKKQAPPALIKLPVQTAEKAS
>AP019193.1|BBG83715.1|955426_957982_-|outer-membrane-protein
MLRKSRLSAAVAFALASAAVVATPVLAEEGQNVEKLQKIKVTGSRISRVDVEGATPVVAISKAKIEQSGQQTVADYLKQASYNSFGSISPSSGSSAQSQATVSLRGLGSERTLVLLNGKRVAGSPSMGGSSINLNSIPMAAVERVEVNLDGGSALYGSDAIGGVINVILKQDYEGLEFQGRIGSPTEEGGDEKSGSIVSGITGEKGALMMVYEHDVKDEIYYKDRDYLAREGASAPSLYGRNIKGIDAATGKTVTRTLEGIDCANTGPGFVPVGSACRFDFAQVAAKTASRTRDTVYVNGRYHINDSVDFVPQLIGSRVTSFGRFAPAAGPFSIDGTTPGGAQLLADNGFIGEKATVYYRFSNVGPRDNDVTDLTGSMNLGFEGTLPTEAVGDVEWNAGYMYSKTDNKSRGTGYVLNPAVQQEVDSGNFKNGEFSSDATNSLSYDTSRTSKMDFFQWYGGLGWSMGELPAGPIGWYLGAEYNDWVYSDTYDSQSAAGNVIGSSGNSGGGVRDVFAAYIESLIPITEQIELNLAGRFDKYSDFGSAFSPKASLRYQPLDNLLLRTSWSQSFRAPGLEDLYAADADSADFAKDYVSCQANGVANCPEEQYSTVRKSNKNLKEETADTFGIGAAYSPIDNLNLSLDYYYIKIDDVIQLATTQTQFYQELNTGSNPNVIRDANGDVEEVYAGMVNLGQLKTSGLDFKADYKYDFDVVTVRYDFGSTYILKYEEGLFAGGPMVDKKGWNAKPELRFNSGVGVNVPQWWNMDAYLSANYIDSQSQDYVDGQTEGHIASQTTWNLNVGVDTPWNGKLQAGVKNMFNVGPSLSSDGFTYDDDLYSIDGRIVYLDYTQKF
>AP019193.1|BBG83716.1|958720_959746_+|microcin-C-ABC-transporter-permease-YejB
MLSYFLRRMLLIIPTFLGITLLVFTITRFVPGGPVERMLLQAQVSQNESGRSSGSKGAQALSDEQIEELKAFYGLDKPMLVAYWEWLQKLAVLDLGESTRYYEPVWGLIKDRLPVTAFFGLATFLLSYAVSIPLGVAKALRHNSRFDSLSSMLIYMAYALPAYVVGIFLITVFAFHLEWLPMGGFPGDEFDGMESSWDQIRTVFAHALLPLIAYAIGDFAILTMTMKNSLMENLSADYVRTAVAKGLPFRKAVTDHAMRNSLIPIASHLGSVLTVFFGGSFLIETIFNIDGIGLLGYEAIVERDYPTVMGILAITSMLMLVGNIVSDICVALVDPRVRFGE
>AP019193.1|BBG83717.1|959748_960786_+|peptide-ABC-transporter-permease
MNPVTLKKLKRFKSIKRGYYSFIIFTTLVLLSLLAELLVNSRALMVSYQGELYFPTYGDVIPGQQFGLDYEYETNYRQLKAKFAADGKGDWVVLPPVPWNPYEQDFKQDAYPPYAPSLAERHLLGTDTSGRDVLARLVYGFRIAIGFAFIALVASYAIGVTIGCMMGFLGGRFDLVLQRFIEIWSQVPFLYVIMILVSLAKPNFGLFVAINVLFGWMGITWYMRTLTYKERARDYVMAARAQGAGTGRIIFHHILPNTLMMIVTLAPFAVVGNISTLTALDYLGFGLAPPTPSWGELLSQGINNLDAIWIVSSVVAAVSLVLIMVSFIGEAIREAFDPRKFTRYQ
>AP019193.1|BBG83718.1|960867_962685_+|ABC-transporter-substrate-binding-protein
MKNKIKWIGALFVLVNGSWVWAASLPADLKWETNDTDPVFASPKALPGGSITMFVDSFPLTFRTVGPDSNGAFRSFIMDNQLRLISFHPNTGNPIPSLATHWAIAPDNQTVYFKLDPRAKWSDGKPVVADDYTFGYEMMRSKDIKGPWFNNYYTTEVVAVEKVDDHTILVKAGTRKAKLDLLNTTELWPQPKHYYKLTPNWVKQYNWAVVPNTGPYVMSDVKKGKSITFSKQKEWWAKDDRYNQHRFNLDTIKVQVIRDHNIAFRHFLKGELDTFEMILPNWWHEKAVTPEYKQGYVQKVMAMTDTKQGGQGVHLNVANPKLADLNVRLGIQHALNIDKMIKTVLRGDYDRATTFGSGFGEFTDMQLPERAYDLAKARDYFAKGGYSKPGPDGILQNDKGERLTLALTYTSQEHSKRLTVLKEEAKKAGLDLELNLVDGATGFKAMLEKKHEAAWLGWGGGGLYPQYWESFHSANANKPQTNNLFNVADKELDALIDAYNVEFDMTKRAELSRQIQQRIYDLAIFVPGVQLNYVRASSWRYVMLPEVPATKNTPDLLYWPMDGYPHSSGGLLWLDPKVKEETLKAKEAGEALTPINLLDKTYARH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: AP019193_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP019193_5

1122852-1122956

Orphan

Consensus_repeat	Method
AGCATGATGCTCCTGGTCATCCATCGGCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of AP019193_5

>merge|AP019193|5|1122852-1122956|CRISPRCasFinder
AGCATGATGCTCCTGGTCATCCATCGGCGGCTACTTGCCTGCAATACTCAGCCCACCGAAACGGACGAATGGAGGAGCATGATGCTCCTGGCCATCCATCGGCGG

>AP019193|5|5|1122852-1122956|CRISPRCasFinder
AGCATGATGCTCCTGGTCATCCATCGGCGG	CTACTTGCCTGCAATACTCAGCCCACCGAAACGGACGAATGGAGG
AGCATGATGCTCCTGGCCATCCATCGGCGG

Protein	Signature genes	Signature genes Name	Protein_function
AP019193.1\|BBG83863.1\|1117814_1118789_+\|pyoverdine-chromophore-biosynthetic-protein-PvcA	unknown	unknown	gnl\|CDD\|368301
AP019193.1\|BBG83859.1\|1110648_1111755_+\|tetrathionate-reductase-subunit-C	unknown	unknown	gnl\|CDD\|184954
AP019193.1\|BBG83876.1\|1130690_1132421_+\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|182944
AP019193.1\|BBG83865.1\|1119674_1120958_+\|N-glycosyltransferase	unknown	unknown	gnl\|CDD\|340817
AP019193.1\|BBG83867.1\|1122238_1122613_-\|glyoxalase	unknown	unknown	gnl\|CDD\|319911
AP019193.1\|BBG83862.1\|1116421_1117258_+\|patatin-family-protein	unknown	unknown	gnl\|CDD\|132847
AP019193.1\|BBG83874.1\|1129826_1130000_+\|hypothetical-protein	unknown	unknown	unknown
AP019193.1\|BBG83866.1\|1121236_1122163_+\|transpeptidase	unknown	unknown	gnl\|CDD\|182294
AP019193.1\|BBG83869.1\|1124296_1125697_-\|TldD-protein	unknown	unknown	gnl\|CDD\|223389
AP019193.1\|BBG83861.1\|1114918_1116280_-\|succinyl-CoA-synthetase-subunit-alpha	unknown	unknown	gnl\|CDD\|377028
AP019193.1\|BBG83873.1\|1129341_1129749_-\|large-conductance-mechanosensitive-channel	unknown	unknown	gnl\|CDD\|234795
AP019193.1\|BBG83878.1\|1133792_1134296_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|225695
AP019193.1\|BBG83864.1\|1118799_1119675_+\|pyoverdine-chromophore-biosynthetic-protein-PvcB	unknown	unknown	gnl\|CDD\|225086
AP019193.1\|BBG83871.1\|1126715_1127615_+\|tyrosine-recombinase-XerD	unknown	unknown	gnl\|CDD\|234713
AP019193.1\|BBG83858.1\|1109867_1110659_+\|tetrathionate-reductase-subunit-B	unknown	unknown	gnl\|CDD\|184955
AP019193.1\|BBG83872.1\|1127611_1129150_-\|sensor-domain-containing-diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
AP019193.1\|BBG83875.1\|1130008_1130725_+\|thiol:disulfide-interchange-protein-DsbC	unknown	unknown	gnl\|CDD\|182802
AP019193.1\|BBG83877.1\|1132571_1133753_+\|methyltransferase	unknown	unknown	gnl\|CDD\|133416
AP019193.1\|BBG83860.1\|1111754_1114862_+\|tetrathionate-reductase-subunit-A	unknown	unknown	gnl\|CDD\|237883
AP019193.1\|BBG83870.1\|1126009_1126528_-\|flavodoxin	unknown	unknown	gnl\|CDD\|183471

Protein	Function_ID	Function_description	E-value
AP019193.1\|BBG83863.1\|1117814_1118789_+\|pyoverdine-chromophore-biosynthetic-protein-PvcA	gnl\|CDD\|368301	pfam05141, DIT1_PvcA, Pyoverdine/dityrosine biosynthesis protein. DIT1 is involved in synthesising dityrosine. Dityrosine is a sporulation-specific component of the yeast ascospore wall that is essential for the resistance of the spores to adverse environmental conditions. Pyoverdine biosynthesis protein PvcA is involved in the biosynthesis of pyoverdine, a cyclized isocyano derivative of tyrosine. It has a modified Rossmann fold.	3.45515e-113
AP019193.1\|BBG83859.1\|1110648_1111755_+\|tetrathionate-reductase-subunit-C	gnl\|CDD\|184954	PRK14992, PRK14992, tetrathionate reductase subunit TtrC.	5.85902e-50
AP019193.1\|BBG83876.1\|1130690_1132421_+\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|182944	PRK11070, PRK11070, single-stranded-DNA-specific exonuclease RecJ.	0
AP019193.1\|BBG83865.1\|1119674_1120958_+\|N-glycosyltransferase	gnl\|CDD\|340817	cd03784, GT1_Gtf-like, UDP-glycosyltransferases and similar proteins. This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.	2.56116e-43
AP019193.1\|BBG83867.1\|1122238_1122613_-\|glyoxalase	gnl\|CDD\|319911	cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA and similar domains. SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein.	1.81342e-25
AP019193.1\|BBG83862.1\|1116421_1117258_+\|patatin-family-protein	gnl\|CDD\|132847	cd07208, Pat_hypo_Ecoli_yjju_like, Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.	9.13351e-101
AP019193.1\|BBG83866.1\|1121236_1122163_+\|transpeptidase	gnl\|CDD\|182294	PRK10190, PRK10190, L,D-transpeptidase; Provisional.	2.3179e-146
AP019193.1\|BBG83869.1\|1124296_1125697_-\|TldD-protein	gnl\|CDD\|223389	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only].	1.04311e-118
AP019193.1\|BBG83861.1\|1114918_1116280_-\|succinyl-CoA-synthetase-subunit-alpha	gnl\|CDD\|377028	pfam03372, Exo_endo_phos, Endonuclease/Exonuclease/phosphatase family. This large family of proteins includes magnesium dependent endonucleases and a large number of phosphatases involved in intracellular signalling. This family includes: AP endonuclease proteins EC:4.2.99.18, DNase I proteins EC:3.1.21.1, Synaptojanin an inositol-1,4,5-trisphosphate phosphatase EC:3.1.3.56, Sphingomyelinase EC:3.1.4.12, and Nocturnin.	5.61324e-08
AP019193.1\|BBG83873.1\|1129341_1129749_-\|large-conductance-mechanosensitive-channel	gnl\|CDD\|234795	PRK00567, mscL, large-conductance mechanosensitive channel protein MscL.	5.64671e-75
AP019193.1\|BBG83878.1\|1133792_1134296_+\|N-acetyltransferase	gnl\|CDD\|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	8.2137e-50
AP019193.1\|BBG83864.1\|1118799_1119675_+\|pyoverdine-chromophore-biosynthetic-protein-PvcB	gnl\|CDD\|225086	COG2175, TauD, Probable taurine catabolism dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism].	1.13413e-47
AP019193.1\|BBG83871.1\|1126715_1127615_+\|tyrosine-recombinase-XerD	gnl\|CDD\|234713	PRK00283, xerD, tyrosine recombinase.	1.8981e-179
AP019193.1\|BBG83858.1\|1109867_1110659_+\|tetrathionate-reductase-subunit-B	gnl\|CDD\|184955	PRK14993, PRK14993, tetrathionate reductase subunit TtrB.	2.31238e-124
AP019193.1\|BBG83872.1\|1127611_1129150_-\|sensor-domain-containing-diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.59638e-43
AP019193.1\|BBG83875.1\|1130008_1130725_+\|thiol:disulfide-interchange-protein-DsbC	gnl\|CDD\|182802	PRK10877, PRK10877, protein disulfide isomerase II DsbC; Provisional.	1.76239e-25
AP019193.1\|BBG83877.1\|1132571_1133753_+\|methyltransferase	gnl\|CDD\|133416	cd04789, HTH_Cfa, Helix-Turn-Helix DNA binding domain of the Cfa transcription regulator. Putative helix-turn-helix (HTH) MerR-like transcription regulator; the N-terminal domain of Cfa, a cyclopropane fatty acid synthase and other related methyltransferases. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	1.05736e-48
AP019193.1\|BBG83860.1\|1111754_1114862_+\|tetrathionate-reductase-subunit-A	gnl\|CDD\|237883	PRK14991, PRK14991, tetrathionate reductase subunit TtrA.	0
AP019193.1\|BBG83870.1\|1126009_1126528_-\|flavodoxin	gnl\|CDD\|183471	PRK12359, PRK12359, flavodoxin FldB; Provisional.	5.08137e-120

>AP019193.1|BBG83867.1|1122238_1122613_-|glyoxalase
MDNTLVWADIPTRDLDRAMAFYSALLDVPVTPIQEEIRFAMLRHDDNNAAACLGPMDKYHQPGHTGPLIYLALGERLQEAEQLVPKIGGRVLEPLHSIGSGHGCRVIIEDTEGNWLALYAPPAG
>AP019193.1|BBG83866.1|1121236_1122163_+|transpeptidase
MNPLRTAASALLCTLALVSQQAAAVEYQLPAANSRLIGENQEYVVPADNRPLEQIASDFQLGLTNIMEANPGVDPYLPKAGSKLVIPHQLILPNAPREGIVINVAEMRLYYYPKGKNVVQVLPIGIGQLGVNTPENWITKVERKRANPTWTPTENIRRRYAAQGKTLPAVWPAGPDNPMGLHALYIGNLYAIHGTNATFGIGLRVSSGCVRLRADDIKYLFDNVPVGTRVQFVNQPVKTTVEPDGGRYMEVHEPLSRNEEEFNSTASVPLPMTQATTRFIAHMDSDSNVVKQVLEQRTGMPTRLNPQV
>AP019193.1|BBG83865.1|1119674_1120958_+|N-glycosyltransferase
MATILLAATATPGHVNPMLAAARLLVAQGHRVLMLCGALFEQRIRAAGAEFVPFAPEVDFDYRALERHFPERASLSGAAQMALALKRFFAAPMAQHDSHLRALIAAERVDLLLVENGFYGVLPLLQQRDGRRLPILMLGVNPVSFSSPDAIFYGPRIPPELRRSLGELPWLDEQTRQLQREVQQSFDAALAEAGAPPLTAPFTDVMVTAPDAFLQLSCAGFEYERPELEGLIRYVGPLLPPRIELTPPPWWERLDERPLVIVSQGTLANVDLGQLLIPAMQGLAGDELQLLLTTGGRDPARLGAAVPANAIVTEHVPFELALPRAAVLVTNGGYGSVQAALAHGVPLVVAGTGEDKAEVATRVAWSGAGINLHSNEPTADAVAAAVRKLVHEPRYRARARLLADEMTELDARAAIAGAVTALLGGQG
>AP019193.1|BBG83864.1|1118799_1119675_+|pyoverdine-chromophore-biosynthetic-protein-PvcB
MTASIVTLGGERCRILPQTPFGLLIEPARNAQPVQSLAIEALRELARRHGVLILRGFESGFTDPERLTRYGEEWGEIMMWPFGAVLDVKEHENATDHIFDSSYVPLHWDGMYKPTLPEFQLFHCVHAPAADEGGRTTFINTRQLLTELDGERLARWEQVHITYRIKQVVHYGGQVRSPLLVPHPVSGETVLRYNEPPREGVRFLNQHALEIEGVAPAEQAAFLQDLHQRLYDPRYFYAHQWQGGDVVIADNLGLLHGREGFTARSARHIQRVHIQASPVCLNPALAPQGAA
>AP019193.1|BBG83863.1|1117814_1118789_+|pyoverdine-chromophore-biosynthetic-protein-PvcA
MSGLSSRHIAHNIFAELLPYRRRFPDPILDRQQEEAEVAAIQIPRLQAFIERGETITCVLPAFPTKSPNPNKVLGTLPDMAERLSLSFLNHLCQRIQLHYAPGMRILICSDGHVFGDLIRVADPAIDAYQAHIEQLILELGATHLGVFHLGMVAGMAEFCASRDFDTLREQLVERYAEPLAQITEEVRSTEEGIRLYRAMTRFLYEDSQLPDTPLSNTALQRDAKARTHAVIQRSRAWGNLLAERFPEAIRLSIHPQASHSLKMGIHMLPTRDDWLTPWHGVAANLDGQFVLMKRRDVLAMEHELVHIHGRPSHYLINGKQAAA
>AP019193.1|BBG83862.1|1116421_1117258_+|patatin-family-protein
MSRRQTALVVEGGAMRGIFAAGVLDAFLAKGRTAFDHCIGVSAGAVNLAAFLAGQQGRNHNVITDYSCRPEFINLAKFLRGGHWLDLDWLWAITIRECRLDLARFAANPVPLTVVTTRVADGQAAYLKANAAELEQQIKASCSVPLVYRDFVRIDGEAMTDGGVADSIPVRHAYEQGARDITVVLSRPLGYRKRAPRLPALHRYLLRETPALARASLSRHQSYNDAIDFIRQPPADCRIRVIVPPAGFRVGRMTTDRGRLEQGYQMGWQAALDYLGSA
>AP019193.1|BBG83861.1|1114918_1116280_-|succinyl-CoA-synthetase-subunit-alpha
MKNISKSLLAAAISLGLMAGCNSQNDSETPTPMVRFATFNLSFDRTAAGMLAGELALSRTEQDALLARLADGTLSGAEKTKALDVQQIRNIAEIIQRTRPDVFLLNEFDNDGKGENTADLKAFNDNYLAHAQHDEVKAISYPVLQNFATNTGLMSGHDLNLDGKVNNGPDDAWGFGNYHGQYAFAVMSQYPIDTKQIRTFQKFKWKDMPGEVNPVIDDCNNAKAPIPAGRQCGDAWYDDAAWQAFPLSSKNHADVPVRIKRGNKEEVVHFLISHPTPPIFGNAARHNVKHNRAEVAFWQDYVETASYMVDDAGKAGGLPAGAKFVIAGDLNADPQIGDGDLTAIQDLHNHALVNQAVTNGALIPVSQGGPECLASQPDQCKRNNNRPTPERITSSSGLQLDHVLPSANLNAVASGVFWPASFEPGYHLVYDAKLGIAKGVSSDHRLVWVDFKL
>AP019193.1|BBG83860.1|1111754_1114862_+|tetrathionate-reductase-subunit-A
MDHSKRKFLKGAAIAGGTGLFVAGYSDTLKQVATGLATGSSGQPTRDPIHGNSLAVEYRVDERGELHPNPAQRVANTMCLGCWTLCGVRARIDNERDQIVRILGNPYHPLSARNHIDFKTPVKQALLATSGYQEGGLDGRSTACARGNAMLEQLDSPQRVTRCLKRVGPRGSGRWQSIPFEQLVAEVVEGGDLFGEGQVDGLRAIRNLAEPLDPANPEYGPRANQLLVSNASDEGRDHFIKRFTFNSFGTRNFANHGAYCGLSFRVGAGALLDDLEKNAHLKPDWDESDFLLFMGTSPQQSGNPFKRQSRQLAANRARPGKPFSYVVVAPSLPNTVNMPSAPANRWLPIRPATDSALAMAMLRWIIDNQRYAEPFLTAPHAAAAERAGYRGFCNASHLVLCDESHPRFGQMLRASDLGLPFDGEAYGEGDAALVEEAGSGEPRPADQCERANLWVDRTIQGPKGALMVKSSFQLLAEACREHSLAQYSAECAVPVSDIEALAREFTSHGTRAAVVSHGGTMSANGFYSAWAIMMLNVMIGNLNARGGAVASGGKFDPFGAGPRYDLASFPGMVKPAGVFLSRSKFPYEKTSEYRRKREAGQNPYPAQEPWFPISGPLLGEHLTAAVNGYPYRLKAWINHMGNPLYGQAGLAKAIGEQLKDPAVLPLFISIDSFINESSALSDYLVPDTLTYESWGWATAWHGVMTKVSTGRWPIVEPRVAKTAEGDPVCMESFFIAVAKRLGLPGFGEGALKGADGKLHGLNRAADFSLYGAANVAYLGEPVPAIEPEDLAWSGVERILPVLNATLSAEEAGRAAYLFARGGRFEPAAKGRDDAGQPSKRWPKPLMVWNPEVGSRRHSQSGQFLSGTPRFFRPQLADGTPLNEAFKPIQWPLLLTSYKSHTMSSMSIGSDRLRQVNPSNRVRLNAQTAAQLGIESGDRVRVSTPDGSVIGVAECVAGVQADAIAIEHGFGHKELGAREHWIDGQKVVANPLRGAGVNLNDLAVLDPSRHGRYPLVDWAIGSSARQGLPARVEKLV
>AP019193.1|BBG83859.1|1110648_1111755_+|tetrathionate-reductase-subunit-C
MVINELLAPAQPITWLPWAVQYFFLIGLAYGALWLGAFELWRKAPDLRLQTLAAVLMVAAGLVAPIALTADLHQPARAWHFYAQTRVGSVMWYGAYLLPLFSLLSMLLGWLLLRPALARRGAEGDKIARLAGLLCLGNWSGHVWLRPLSLLAALSGLSIALYTGLETMAVAARPLWHTPWLPWLLTLSAVLGAQSALLLLNRLLAGWRAQTESTLLRQSGWTLGLLALSLLGWALLGGASAAEAAALYRLDPSWRLAAHWLLLTLGLAGLLMLLRPRTSARLSLWGLALLGLHLVWGLRWLVLIQGQLAPKYGAGVYLYEIAWGPTGVLGILGTFGLLLALLAALSELVRPSASPAIKAPTPFAREAL
>AP019193.1|BBG83858.1|1109867_1110659_+|tetrathionate-reductase-subunit-B
MEPSKRRLLSGIAALTAGAALIPVSQVQAQSVPAAPRNGRAAISRGDGRKRYGMLIDLRRCVGCQACTVACTIENQPPLGQFRTTVSQYEVSDVAALEAPASLLMLPRLCNHCAEPACLDVCPTGATFQRDDGIVVVNNDWCVGCGYCVQACPYDARFINHETNTADKCTFCAHRLEAGLLPACVESCVGEARIIGDLNDPKSRISRLLRQHEPALKVLKPEANTQPRVFYLGMDEAFVSKVDGNPALGTLLTDDGKEIAHGH
>AP019193.1|BBG83869.1|1124296_1125697_-|TldD-protein
MTPFSLLAPAIARDVLDHALALGADFAELFVERKRRSQLSLLSSQIENISGGLDFGIGVRLCYGHKVLYGYTNLASRDELLRIVSLLAAKDRRDPVVTATAFDFSRLSDRNPVALPLSADKLLEQKIAYLHAMDAAARAESTKVSQFAGNVLGWEQEVEIFNSEGVQVSDRRHYNRIMAQTIAALGSEQSVGYEAPGAMMGWEHAAGVDPRELALTATRQALVKLGAAPCPSGKLPVIMESGFGGVIFHEACGHLLETTSVAKKASVFHDKMGQLIANPAVSAVDEGLQGNAWGSINVDDEGMATQHTQLIKDGVLTGFLVDRMGALRTGYARTGSGRRESYKFAPASRMRNTYIEPGNHSLDEMLATVEHGIYAKRMGGGSVQPGTGEFNFNVQEAYLIEGGKITRPLKSATLIGTGPQVLKEISMVGRDLALSAGMCGSVSGSIPASVGQPPLKVDSILVGGNA
>AP019193.1|BBG83870.1|1126009_1126528_-|flavodoxin
MKIGLFYGSTTCYTEMAAEKIRALIGPELVDLHNIKDVPLTLMQEYDILILGISTWDFGELQEDWESRWEDIQDVELEGRIIALFGMGDQLGYGEWYQDALGLLHDQLVPKGVKLVGYWPNEGYEFDASKALIDDGRHFVGLALDDANQYDQTESRIEQWVDQILSEIHELL
>AP019193.1|BBG83871.1|1126715_1127615_+|tyrosine-recombinase-XerD
MSKSESHPLIEPFLDALWLERGLSDNTVSSYRTDLEKFSLWLDEQGGSLLLAGLDDIQHYLAWRVDQQFAASSTARFLSALRRFYQYLNREKLRSDDPTVLLEGPKLPKKLPSDLSEAEVEALLQAPLVDEPLELRDKAMLELLYATGLRVSELVGLTAEHVSLRQGLVRVVGKGNKERLVPMGEEAVHWLERYYREARTLLLGGTSSDVVFPSKQARMMTRQTFWHRIKLYAQRAGIQGELSPHTLRHAFATHLLNHGADLRVVQMLLGHADLSTTQIYTHVANERLKALHGQHHPRA
>AP019193.1|BBG83872.1|1127611_1129150_-|sensor-domain-containing-diguanylate-cyclase
MPPLTVTARPHHSFILRYLLLLALPLLLLTAGSGYLFVTKQQETMRNRFEFFSNSSAQQWDGALASVDAQINILAADLELNDGILPPVLSQRHHQVWQQLSRTGSMLKGLYYVQRDNKLVNFAHLPIPGSFDASRRNWYQAAIKTPGINVWSAPYLDAIQHVPVITLSRAVLNRQGELLAVIGIDIDLSEISQRIGRLLQGGRQISYLLYDMKNHSVVAHSDPLKNGAPLDDERLAELKGRSGSLLSDNDELIAYYTLTNNPNWRVIIIYPFSNSFVIKELLPTMMVGLLLSLAMYILVAVIFHQRLENTIGMLVQVVRQLRITPPGQPLIIPRIPGIEELEEEITMISDQMQAESEKAQRDVLTGLYNRRYMDTLLAELHQQHTPYVLAIIDIDNFKQINDQYGHPAGDSVLRRTASLGSKLLEGKATLCRFGGEELVAIFEQGRLKEAHQQMEQWHRAMGKQNWREPGLTVTFSGGLAEALDAPPAQVLAQADAALYRAKQEGKDRLSLV
>AP019193.1|BBG83873.1|1129341_1129749_-|large-conductance-mechanosensitive-channel
MSLIQEFKAFASRGNVIDMAVGIIIGAAFGKIVSSFVGDVIMPPIGLILGGVDFSDLAVTLKAAEGSTPAVVIAYGKFIQTIIDFLIISFAIFMGLKAINTLKRKQEEEAAPAGPTKDQELLTEIRDLLKSQQGK
>AP019193.1|BBG83874.1|1129826_1130000_+|hypothetical-protein
MTVVFPVVPVSLLGLCPIGNLSDRDFFAVLAINQSVIKRLRREYSLSYLVSPFVHAK
>AP019193.1|BBG83875.1|1130008_1130725_+|thiol:disulfide-interchange-protein-DsbC
MKYLLLGMMLLGSFAASAGMDPQQLKQTIEQRLGVQVYLVDETPMPGLYMLGTAQGLLYTDARGDYVLQGTMLDLAHDMKNLTMLGLRQQRQLALAQIGERRVQLRAEQERHRVTLFTDLACSSCRTTLAELPVLQARGVSVQLLPVLGTFADLAEAQARWCDPRQFGALDLSDHLPETGCNEILAHHIGLSQWLGIKALPSWVLPNGDLVRGYQSPEQLLKILDHINAPANPSSSAS
>AP019193.1|BBG83876.1|1130690_1132421_+|single-stranded-DNA-specific-exonuclease-RecJ
MPLLIRRRPRVDDSHLPATLHPLLRQIFASRGVEDPALLERSASQLLPPQRLFGMAQAVPLLAEALTAQKRILIVGDFDCDGATSSALCVLALRAMGGRHVDFLVPNRFEFGYGLTPEIVELAVARGAEFLITVDNGISSIAGVAAAKAAGMQVLVTDHHLPGQELPDADAIVNPNQHGCDFPSKSLAGVGVAFYLMAALNTQLRQSGWYERQGLRAPNVADYLDLVALGTVADVVALDGNNRILVHQGLQRIRAGRCRPGIQALVDVSGRDGRRLCAADLGFALGPRLNAVGRLDDMSLGVACLLSEDINLARQLASEMDSLNQERKEIEQGMQQEALATLEQIRFRDGEVPSGIVLHRDEWHQGVVGLVASKVKEKYYRPVIAFAESSETELKGSGRSIPGVHLRDALELLDTRHPGLMGKFGGHAMAAGLTLPKANIEAFGRAFEAVICELVTPELLTGVLLTDGELLPDELSLELAELIRASGPWGQAFPEPLFDGEFVLVQQRLVGEKHLKMMLTTDSGHAVDAIAFGVDLQRWPDASVKRVRLVYRLDVNEWRGNRSVQLLVEHLEAAGL
>AP019193.1|BBG83877.1|1132571_1133753_+|methyltransferase
MKISELARRCGLARSTLLYYEKLGVIAGTRAANGYRHYDDEDLQRLRMVQALQAGGLSLKQCLACLAGELELATLQARVRELDEELAQMQRARDLLADLAGLRAHSGDEFKGWQRQLQHQAPQAYFAWVMKQGFSEKERYHLQWLSKDMNEHERYIRDFKLLLDGMSYWGPGDSLFTQQQFAALPSQPRRILDMGCGRGAATLALAQVTDATIVAIDLDEEALAAVARSASAAGLNQVTTLCANMAALPADLAPADLIWAEGSAYTIGVANALQAWRPYLAGPAACLVLSDLVWLTDTPPEEALAFWQRDYPAMQTLTGLLKTVQEAGYRCLSHTPLPQRAWHNYLDPIERNLARHRAELGDSPAWQDLSREVAIHRQYLGSYGYVICCLQAA
>AP019193.1|BBG83878.1|1133792_1134296_+|N-acetyltransferase
MNILIRPETGADHDAIEALTVAAFLNAPHTDHNEQLIVRDLRQAGALSLSLVAEQEGRVVGHLCFSPVTISDGSPHWYGLGPISVSPELQGKGLGSRLMDAGLAELKGMGAAGCVVLGDPGFYGRFGFVSEPGLTLPGVPAEYFMARSFGAAMPRGEVCYHPAFVQA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: AP019193_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP019193_6

1292268-1292376

Orphan

Consensus_repeat	Method
CACCGCCGTCAGCTGTGGGCATCCCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of AP019193_6

>merge|AP019193|6|1292268-1292376|CRISPRCasFinder
CACCGCCGTCAGCTGTGGGCATCCCAACGCCGGCAGATCTGACGCAGTCTTCGCCGCAGCTGGCGCAAGGTATGTTGACGCTGCACCGCCGTCAGCTGTGGGTATCCCA

>AP019193|6|6|1292268-1292376|CRISPRCasFinder
CACCGCCGTCAGCTGTGGGCATCCCA	ACGCCGGCAGATCTGACGCAGTCTTCGCCGCAGCTGGCGCAAGGTATGTTGACGCTG
CACCGCCGTCAGCTGTGGGTATCCCA

Protein	Signature genes	Signature genes Name	Protein_function
AP019193.1\|BBG84017.1\|1282539_1283340_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225464
AP019193.1\|BBG84016.1\|1282144_1282528_+\|invasion-protein	unknown	unknown	gnl\|CDD\|377264
AP019193.1\|BBG84023.1\|1288718_1288901_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371878
AP019193.1\|BBG84030.1\|1298284_1298608_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368828
AP019193.1\|BBG84025.1\|1290756_1292199_+\|sodium:alanine-symporter	unknown	unknown	gnl\|CDD\|376500
AP019193.1\|BBG84035.1\|1302847_1303270_-\|putative-pre-16S-rRNA-nuclease	unknown	unknown	gnl\|CDD\|234639
AP019193.1\|BBG84028.1\|1295304_1296225_-\|ATPase-AAA	unknown	unknown	gnl\|CDD\|223786
AP019193.1\|BBG84027.1\|1294318_1295305_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224635
AP019193.1\|BBG84033.1\|1299968_1300739_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|182312
AP019193.1\|BBG84019.1\|1284676_1285957_+\|C4-dicarboxylate-transport-protein	unknown	unknown	gnl\|CDD\|234968
AP019193.1\|BBG84020.1\|1286068_1286449_-\|autonomous-glycyl-radical-cofactor	unknown	unknown	gnl\|CDD\|213978
AP019193.1\|BBG84018.1\|1283515_1284370_+\|2-dehydro-3-deoxyphosphooctonate-aldolase	unknown	unknown	gnl\|CDD\|235363
AP019193.1\|BBG84036.1\|1303316_1303871_-\|UPF0301-protein	unknown	unknown	gnl\|CDD\|234694
AP019193.1\|BBG84031.1\|1298638_1299592_+\|hypothetical-protein	unknown	unknown	unknown
AP019193.1\|BBG84032.1\|1299768_1299972_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182312
AP019193.1\|BBG84022.1\|1288118_1288667_+\|hemerythrin	unknown	unknown	gnl\|CDD\|226454
AP019193.1\|BBG84029.1\|1296292_1297564_+\|beta-lactamase	unknown	unknown	gnl\|CDD\|236894
AP019193.1\|BBG84021.1\|1287291_1287960_+\|uracil-DNA-glycosylase	unknown	unknown	gnl\|CDD\|235376
AP019193.1\|BBG84034.1\|1301294_1302800_+\|dipeptide-and-tripeptide-permease-B	unknown	unknown	gnl\|CDD\|182306
AP019193.1\|BBG84024.1\|1289061_1290156_-\|transaldolase	unknown	unknown	gnl\|CDD\|235381

Protein	Function_ID	Function_description	E-value
AP019193.1\|BBG84017.1\|1282539_1283340_+\|hypothetical-protein	gnl\|CDD\|225464	COG2912, COG2912, Uncharacterized conserved protein [Function unknown].	1.93414e-56
AP019193.1\|BBG84016.1\|1282144_1282528_+\|invasion-protein	gnl\|CDD\|377264	pfam04247, SirB, Invasion gene expression up-regulator, SirB. SirB up-regulates Salmonella typhimurium invasion gene transcription. It is, however, not essential for the expression of these genes. Its function is unknown.	2.13229e-25
AP019193.1\|BBG84023.1\|1288718_1288901_-\|hypothetical-protein	gnl\|CDD\|371878	pfam12065, DUF3545, Protein of unknown function (DUF3545). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 60 to 77 amino acids in length. This protein has two completely conserved residues (R and L) that may be functionally important.	5.50267e-11
AP019193.1\|BBG84030.1\|1298284_1298608_+\|hypothetical-protein	gnl\|CDD\|368828	pfam06291, Lambda_Bor, Bor protein. This family consists of several Bacteriophage lambda Bor and Escherichia coli Iss proteins. Expression of bor significantly increases the survival of the Escherichia coli host cell in animal serum. This property is a well known bacterial virulence determinant indeed, bor and its adjacent sequences are highly homologous to the iss serum resistance locus of the plasmid ColV2-K94, which confers virulence in animals. It has been suggested that lysogeny may generally have a role in bacterial survival in animal hosts, and perhaps in pathogenesis.	8.02611e-16
AP019193.1\|BBG84025.1\|1290756_1292199_+\|sodium:alanine-symporter	gnl\|CDD\|376500	pfam01235, Na_Ala_symp, Sodium:alanine symporter family.	0
AP019193.1\|BBG84035.1\|1302847_1303270_-\|putative-pre-16S-rRNA-nuclease	gnl\|CDD\|234639	PRK00109, PRK00109, Holliday junction resolvase RuvX.	4.79324e-71
AP019193.1\|BBG84028.1\|1295304_1296225_-\|ATPase-AAA	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	5.09005e-82
AP019193.1\|BBG84027.1\|1294318_1295305_-\|hypothetical-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	6.97161e-13
AP019193.1\|BBG84033.1\|1299968_1300739_+\|transcriptional-regulator	gnl\|CDD\|182312	PRK10216, PRK10216, HTH-type transcriptional regulator YidZ.	4.24168e-74
AP019193.1\|BBG84019.1\|1284676_1285957_+\|C4-dicarboxylate-transport-protein	gnl\|CDD\|234968	PRK01663, PRK01663, C4-dicarboxylate transporter DctA; Reviewed.	0
AP019193.1\|BBG84020.1\|1286068_1286449_-\|autonomous-glycyl-radical-cofactor	gnl\|CDD\|213978	TIGR04365, Autonomous_glycyl_radical_cofactor, autonomous glycyl radical cofactor GrcA. This small protein, previously designated YfiD in E. coli, is closely homologous to pyruvate formate_lyase (PFL) in a region surrounding the stable glycyl radical that is prepared by the action of pyruvate formate-lyase activase, a radical SAM enzyme. When damage at the site of this radical breaks the main chain of PFL, this protein acts as a spare part that reintroduces the needed stable glycyl radical. Cutoffs for this model are set to exclude a set of closely related phage proteins that appear to have a corresponding function.	7.55534e-83
AP019193.1\|BBG84018.1\|1283515_1284370_+\|2-dehydro-3-deoxyphosphooctonate-aldolase	gnl\|CDD\|235363	PRK05198, PRK05198, 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional.	0
AP019193.1\|BBG84036.1\|1303316_1303871_-\|UPF0301-protein	gnl\|CDD\|234694	PRK00228, PRK00228, YqgE/AlgH family protein.	8.82141e-90
AP019193.1\|BBG84032.1\|1299768_1299972_+\|hypothetical-protein	gnl\|CDD\|182312	PRK10216, PRK10216, HTH-type transcriptional regulator YidZ.	1.04926e-21
AP019193.1\|BBG84022.1\|1288118_1288667_+\|hemerythrin	gnl\|CDD\|226454	COG3945, COG3945, Uncharacterized conserved protein [Function unknown].	2.87285e-18
AP019193.1\|BBG84029.1\|1296292_1297564_+\|beta-lactamase	gnl\|CDD\|236894	PRK11289, ampC, beta-lactamase/D-alanine carboxypeptidase; Provisional.	0
AP019193.1\|BBG84021.1\|1287291_1287960_+\|uracil-DNA-glycosylase	gnl\|CDD\|235376	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional.	5.17803e-149
AP019193.1\|BBG84034.1\|1301294_1302800_+\|dipeptide-and-tripeptide-permease-B	gnl\|CDD\|182306	PRK10207, PRK10207, dipeptide/tripeptide permease DtpB.	0
AP019193.1\|BBG84024.1\|1289061_1290156_-\|transaldolase	gnl\|CDD\|235381	PRK05269, PRK05269, transaldolase B; Provisional.	0

>AP019193.1|BBG84025.1|1290756_1292199_+|sodium:alanine-symporter
MDTLIAMINDLMWGAVLIYLLIGVGIFFTFRLGFIQIRHFGHMFSVLRNSRKSDNAGISSFQALCTSLAARVGTGNLAGVAVAIYLGGPGAIFWMWLIAFIGMATAFVESTLAQLYKVKDEDGNYRGGPAYYMEKGLGMRWMGVLFSLCLILAFGLVFNAVQANSISLAMNVAFGIPDWVSGLALVVLSGLIIFGGIRGIARFAELVVPFMALAYILMALFVVAMNISELPGVFSLIIKSAFGLEQAGSGALGYAISQAMINGIKRGLFSNEAGMGSAPNAAATATPYPPHPASQGYVQMLGVFLDTIVICTCTAAIILMSGQFEPGSGITGVELTQRALSSQIGGGGNIFIAAAIFFFAFTSIVANYSYAETNLVFLEHNHKGGLMLFRMFVLGMVMFGSVGELPTVWAMADVSMGLMAIVNLVAILLLSGVAIKLARDYNDQLKLGKVPTFDANKYPEIRSQLEEGIWDNPAQNSKQA
>AP019193.1|BBG84024.1|1289061_1290156_-|transaldolase
MGHTHRAFLSLSRRDFVILFQNCRLTPATPEPAPFARRVRPHKEMIFAMADKLTQLKALTTVVADTGDIEAIKRYQPIDATTNPSLVLKASEIPEYAALIEDAINWAKAQSQDKAQQIIDAGDKLAVNIGLEVLKIVPGRISTEVDARLSFDTQASIAKARKLIRLYNEAGISNDRILIKLASTWEGIRAAEVLEKEGIQCNLTLLFSFAQARACAEAGAFLISPFVGRILDWYKAKHNRDYTASEDPGVVSVTSIYDYYKQHDYPTVVMGASFRNTGEILELAGCDRLTIGPALLEELSKTEGAVVRKLNYTGERKAKPAPMTEAEFRWELNQDAMAHEKLGEGIRMFAIDQGKLETMLASRL
>AP019193.1|BBG84023.1|1288718_1288901_-|hypothetical-protein
MEMFNFEYDDVVELGSRSRGTTGKKRKWREIEALKDKHRLQKELQSIDIAYEGLSDEIEL
>AP019193.1|BBG84022.1|1288118_1288667_+|hemerythrin
MLASLHKDHLNIARLLDLLKHKLAAIRDEQRVSYFLIRDVVDYLREVSDKYHHPKEDIIYDYYLKYRVVEGDVANRLQAEHAKLLEAGAELKEMVEMILMDAVIPLDQFTAKLEQFVALQEAHMNYEEGVIFPHLRDSLTEDDWRHLEQIWQNRAIGDPLFGPEISQHFQALAKRLSLPLSS
>AP019193.1|BBG84021.1|1287291_1287960_+|uracil-DNA-glycosylase
MQTWTDVIGSEKEQDYFKATLATVRSEREAGKVIYPPATDVFNAFKLTELDQVKVVILGQDPYHGPNQAHGLCFSVLPGVRTPPSLVNIYKEMQRDLPGFVTPSHGFLESWAKQGVLLLNTVLTVQAGQAHSHAHLGWETFTDRVIEQINASCQGVVFLLWGAHAQKKGRFIDRQRHHVLSAPHPSPLSAHRGFIGCGHFSETNRLLSQQGMSPINWHSVCE
>AP019193.1|BBG84020.1|1286068_1286449_-|autonomous-glycyl-radical-cofactor
MIKGIQITQSANAALLNSFWLLDEEKQQARCICAKGDTFAADQEVSVSDLGQFEYRELPVQAEPAVEGGQHLNVNVLRRETLEDAIANPEKYPQLTIRVSGYAVRFNALTPEQQRDVVTRTFTQSL
>AP019193.1|BBG84019.1|1284676_1285957_+|C4-dicarboxylate-transport-protein
MQKKIVSSLYFQVLLAITLGVILGHIYPDLGADMKPLGDGFVKLIKMIIAPVIFCTVVTGIAGMESMKAVGKTGAIALLYFEVVSTIALIIGLCVVNLLQPGAGMNVDPATLDASAISAYAEQAKAQGIIPFLLDVIPGSVIGAFASGNILQVLLFAVLFGFSLHHIGEKGKVIFNVIDSFSQVIFGIINMIMRLAPVGAFGAMAFTIGKYGIGSLVQLGQLIACFYMTCLLFIFLVLGSIARANGFSILRFISYIREELLIVLGTSSSESVLPRMLVKMEALGCKKSVVGLVIPTGYSFNLDGTSIYLTMAAIFIAQATNTPLDLFQQITLLVVLLISSKGAAGVTGSGFIVLAATISAVGHLPLAGLALILGIDRFMSEARALTNLIGNGVATLVVARYCDQLDEQQMHEALSNPPQAVKLDQH
>AP019193.1|BBG84018.1|1283515_1284370_+|2-dehydro-3-deoxyphosphooctonate-aldolase
MEQKNIKVNGIDVANDKPFVLFGGMNVLESRDMAMAVCEKYVEVTSKLGIPFVFKASWDKANRSSIHSYRGPGLEEGMKIFQELKATFGMPVISDLHEPHQAKPVAEVVDVIQLPAFLARQTDLVEAMARTGNVINIKKPQFLSPSQMKNITDKFEECGNDRLILCERGANFGYDNLVVDMLGLGVMKKSTGGYPVIFDVTHSLQCRDPMGAASGGRREQVTELARAGMAVGLAGLFIESHPDPKIARCDGPSALPLEKLEGFLKQMKAIDDLIKGFEPLDTSI
>AP019193.1|BBG84017.1|1282539_1283340_+|hypothetical-protein
MIRVDEWTDFEAHDIAELALSVSDEIHGISGRGTAELARLDAWLDEAIEEGDCDQVRRQLLQGFYQTLGFHGDWQDYFSVANCDLAQVLARKQGIPVSLGILIIQLGRKLGLDVEGICFPGHFLVSFAGSEGEVYVDPFTGDELSLHHIELLLRGALGNLATLSSDHLQPAGQWEIIERLLNVSKGALLREDRMTEALRCSELLLRMKPGDPLETRDRGFIYEQLDCPRFAADDFEYFIEQCPDDPVADVLKAQLAALDLSPKPLH
>AP019193.1|BBG84016.1|1282144_1282528_+|invasion-protein
MYFAIKHLHLLLIGLAVLMFMLRFYWLQTGSSRAASARTLRLSGWLNGLVVLSGVLLCMVLDLNPLNNATPWLSEKLTAILVVAFLAMMALRLARSNGIRWFAFLGALGWVFFIAKLAVYKQASLFG
>AP019193.1|BBG84027.1|1294318_1295305_-|hypothetical-protein
MNWRQHRARWQQGWLARRIPPTRQITLQGRCLFILPTRLGLWYLLVMLAIYLLGTNYQNNLVLLVAYGLGSLFMVTMWLTHRNLLGLSLLGGPAVLGEAGSTLPMPITVRSERPLQALQFSLNEGRLWLAQVDVVPQPLLLPVLGPRRGRLPLERLRVESRYPLGLFRCWTLLDLQLEGWLAPAPEYGPLRGEAATDAAGNRGQPTPASMGDFDMLRAHQSGEPLSRVAWKQLAQGRGLLVKQFCEPGQDDTHLSLQRVGGRDREQRLAVLAWWCDDYAKRGIPFSLTLAGRTLGPDSGAAFLQRCRLALARVDAVEPTQETDLDAAR
>AP019193.1|BBG84028.1|1295304_1296225_-|ATPase-AAA
MQTQPQITRLLTALEQVILGKPLQLKIALVTLLARGHLLIEDLPGMGKTTLAHALAQVLGLDCRRVQFTADLLPADLLGLQIFDPHQQQFRFHPGPVFTQVLLADEINRASPKVQSALLEAMAEGKVSIEGESHPLPSPFFVIATQNPADQAGTYPLPESQLDRFAVRLSLGFPTPEAERRLLRGASQSAPLERQLSAAELAALQAEAAQIHLSDASLDYLLALVQQSRFDADLPQPLSPRAAQTLLAVSRAWALVAGRRFVSVEDVQAVFPYVAEHRLRGSFGVQRGEACPLSQRLLARVDPDRP
>AP019193.1|BBG84029.1|1296292_1297564_+|beta-lactamase
MDNPLNLDDLVGDFTQTSPRLMLGTRWPVRLAAPEHTEILAMKQTRARPLLALGTLLLAPFSLAAPVDPLKAVVDDAIRPVLKQHRIPGMAVAVLKGGQAHYFNYGLADVATGSKVNEQTLFEIGSVSKTYTATLGAYAVVKGGFKLDDKVSRHAPWLKGSAFDGVTMAELATYSAGGLPLQFPDEVDSSDTMRAYYRHWTPAYQPGSHRQYSNPSIGLFGHLAASSLQQPFSTLMEQTLLPALGLEHTYLQVPEAAMARYAFGYSKEDKPIRVNPGMLADEAYGIKTGSAGLLAFVKANISGVDDKALQQAIALTHTGFYRVGEMTQGLGWESYAYPVSEQTLLAGNSPAVSLKANPVTQFDAPATPGAMRLYNKTGSTGGFGAYVAFVPAQGIGIVMLANRNYPIEARVSAAHAILSQLAP
>AP019193.1|BBG84030.1|1298284_1298608_+|hypothetical-protein
MFVGKYSVVLFLAILSGGCAKQVIDVNASQRFELGAARPVNSTEITSHFFFSDIDLGLNEKVDAAAICHGVENIISIETNVSFLDSMLSGITYGFYTPRSARIYCAA
>AP019193.1|BBG84031.1|1298638_1299592_+|hypothetical-protein
MKKINGLLLAGICAGSLYGCGGSDDKGADPANSVPPGKSFEVEHVTVPNAVLYQANYMSADGKAGPSGYALQYEKRDGGTYPRWSAWANNGVVASWWWLNDGDETTTSKPASARLHRTSYLERDNGIAAAQAIRQVDVVYERTVHAQPQIVTEHPVVGVASNIELNLAATGTDSYPAWSGKVALTELKTRGVNTGSWHANNGYGTELLGNVESTRNGDKVTITMELLAAGCTLTGEGISSGHTRFDRLQFTGFERCRFDPAKGADWTAVDYHHNAALAKAKESALGYVATFKSDHGSRLLVVGFPELDGLVWLVNPR
>AP019193.1|BBG84032.1|1299768_1299972_+|hypothetical-protein
MRTLSELDLNLLVVFKYLMAERSVAGTAKQLSVTPSTVSKALAKLREWFADPLFVRGRRGCSPPIWR
>AP019193.1|BBG84033.1|1299968_1300739_+|transcriptional-regulator
MTLEEELTVWFQLTERIAALNSEAIPDGARFNLVMQSPFYNSLLSDLPMTIHGTYPNSVVKMLGWNRNSLDDIVNGDADLGVCVRESYSRSQLKLRNLPYYIDHEVLFCDRPVVFLRKDHPLLQQEWSLEHFLDCPHSSVVLEVLETWGLDLLLEDEGLARRVPVMVSSFEQSLHIASQADNDLIAVAPSYCAGYAAKYHPNLMTMPLPLPEALYQQLELTFILLWHKRHNQDAKVMWLLNEIRRLYHRESSPLAP
>AP019193.1|BBG84034.1|1301294_1302800_+|dipeptide-and-tripeptide-permease-B
MRPSAPTGLLQQPKPFFMIFFVELWERFGYYGVQGILAVFFVQQLGFSQEQSFITFGAFSALVYGLISVGGYVGDHVLGTKRTMVLGAIVLVIGYFMTGMSIYNPDLIFYALGTIAVGNCLFKANPASLLAKCYERGDPRLDGAFTLFYMSINIGSLISLSLAPVIADHYGYTVTYNLCGVGLVIALLTFFACRHMVRDIGSEPDHLPLDYGKLLLVLLGSVALVFFCAWLMHHVVIANMVLMTVTLAVVIFFFREAFKLDAVARNKMYVAFVLMLEAVVFYVLYAQMPTSLNFFAINNMHHEMLGMSVNPISFQALNPFWVVVGSPVLAMIYTRLGSKGRDLTMPLKFTLGMLFCSLGFLTAAASGIWFADAQGLTSPWFMVLIYLFQSLGELMISALGLAMVAALVPQRLMGFILGMWFLTQAMASLLGGYVATFTAVPQGVTDPLQTLPIYTDVFGKIGLVTLLVAVVMALMVPWLNRMMHAGQSEEGESLLSQQAKA
>AP019193.1|BBG84035.1|1302847_1303270_-|putative-pre-16S-rRNA-nuclease
MSSRSIMGFDYGTKSIGVAIGQELTGTAQPLRAIKANDGIPNWDDIDKLLKEWQPDLLVVGLPLNMDGTEQEITVRARKFGNRLHGRFGKQVEFKDERLTTTDARARLFERGGYRALEKGSVDGVSAQLILEAWMEEQYG
>AP019193.1|BBG84036.1|1303316_1303871_-|UPF0301-protein
MQTLQNHFLLAMPSLSDPYFERSLVYLCEHSEEGAMGLVVNIPVDMSLDAMLTQLKLAPPPSPELKQPVLQGGPVHADRGFVLHSFRPGFNSTLQVGDELMVTTSKDILETLGTEEAPAHWLVALGYAGWSAGQLEQELVDGAWLVIPPNPDLVFKTPIHQRWQQAAASIGVNPIHLSSDIGHS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: AP019193_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP019193_7

1762480-1762581

Orphan

Consensus_repeat	Method
GCTTGGTGTAATCCTGCGCTTTGGCT	CRISPRCasFinder

1 spacers

DinG

The CRISPR arrays of AP019193_7

>merge|AP019193|7|1762480-1762581|CRISPRCasFinder
GCTTGGTGTAATCCTGCGCTTTGGCTGGGATAACGACCGTCATTTCCTGTCTTGGCGAGGGACATGCGCTGGCGATGCTTGGTGTAATCCTGCGCTTTGGCT

>AP019193|7|7|1762480-1762581|CRISPRCasFinder
GCTTGGTGTAATCCTGCGCTTTGGCT	GGGATAACGACCGTCATTTCCTGTCTTGGCGAGGGACATGCGCTGGCGAT
GCTTGGTGTAATCCTGCGCTTTGGCT

Protein	Signature genes	Signature genes Name	Protein_function
AP019193.1\|BBG84432.1\|1750573_1751233_-\|DUF2057-domain-containing-protein	unknown	unknown	gnl\|CDD\|378258
AP019193.1\|BBG84437.1\|1757518_1759027_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|283518
AP019193.1\|BBG84438.1\|1759149_1759644_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378263
AP019193.1\|BBG84439.1\|1759637_1760156_-\|flagellar-biosynthesis-protein-FlhF	unknown	unknown	gnl\|CDD\|378263
AP019193.1\|BBG84431.1\|1749592_1750489_-\|histone-deacetylase	unknown	unknown	gnl\|CDD\|212519
AP019193.1\|BBG84442.1\|1764386_1765388_+\|tetraacyldisaccharide-4'-kinase	unknown	unknown	gnl\|CDD\|234808
AP019193.1\|BBG84446.1\|1767500_1769351_+\|UvrABC-system-protein-C	unknown	unknown	gnl\|CDD\|234792
AP019193.1\|BBG84449.1\|1772028_1772565_+\|hypothetical-protein	unknown	unknown	unknown
AP019193.1\|BBG84445.1\|1766667_1767312_+\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|236538
AP019193.1\|BBG84447.1\|1769655_1770210_+\|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	unknown	unknown	gnl\|CDD\|182763
AP019193.1\|BBG84441.1\|1762617_1764387_+\|lipid-A-export-ATP-binding/permease-protein-MsbA	unknown	unknown	gnl\|CDD\|183016
AP019193.1\|BBG84444.1\|1765693_1766455_+\|3-deoxy-manno-octulosonate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|235473
AP019193.1\|BBG84443.1\|1765508_1765697_+\|UPF0434-protein	unknown	unknown	gnl\|CDD\|183328
AP019193.1\|BBG84450.1\|1772951_1773314_+\|hypothetical-protein	unknown	unknown	unknown
AP019193.1\|BBG84440.1\|1760183_1762385_+\|DNA-internalization-related-competence-protein-ComEC/Rec2	unknown	unknown	gnl\|CDD\|236924
AP019193.1\|BBG84434.1\|1753859_1754903_+\|outer-membrane-protein	unknown	unknown	gnl\|CDD\|225744
AP019193.1\|BBG84433.1\|1751406_1753560_-\|ATP-dependent-DNA-helicase-DinG	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|236966
AP019193.1\|BBG84436.1\|1756250_1757441_+\|aromatic-amino-acid-aminotransferase	unknown	unknown	gnl\|CDD\|181731
AP019193.1\|BBG84448.1\|1770881_1771694_-\|hypothetical-protein	unknown	unknown	unknown
AP019193.1\|BBG84435.1\|1755133_1756075_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|180519

Protein	Function_ID	Function_description	E-value
AP019193.1\|BBG84432.1\|1750573_1751233_-\|DUF2057-domain-containing-protein	gnl\|CDD\|378258	pfam09829, DUF2057, Uncharacterized protein conserved in bacteria (DUF2057). This domain, found in various prokaryotic proteins, has no known function.	8.26998e-50
AP019193.1\|BBG84437.1\|1757518_1759027_-\|hypothetical-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0
AP019193.1\|BBG84438.1\|1759149_1759644_-\|hypothetical-protein	gnl\|CDD\|378263	pfam09835, DUF2062, Uncharacterized protein conserved in bacteria (DUF2062). This domain, found in various prokaryotic proteins, has no known function.	2.93777e-29
AP019193.1\|BBG84439.1\|1759637_1760156_-\|flagellar-biosynthesis-protein-FlhF	gnl\|CDD\|378263	pfam09835, DUF2062, Uncharacterized protein conserved in bacteria (DUF2062). This domain, found in various prokaryotic proteins, has no known function.	3.616e-46
AP019193.1\|BBG84431.1\|1749592_1750489_-\|histone-deacetylase	gnl\|CDD\|212519	cd09993, HDAC_classIV, Histone deacetylase class IV also known as histone deacetylase 11. Class IV histone deacetylases (HDAC11; EC 3.5.1.98) are predicted Zn-dependent enzymes. This class includes animal HDAC11, plant HDA2 and related bacterial deacetylases. Enzymes in this subfamily participate in regulation of a number of different processes through protein modification (deacetylation). They catalyze hydrolysis of N(6)-acetyl-lysine of histones (or other proteins) to yield a deacetylated proteins. Histone deacetylases often act as members of large multi-protein complexes such as mSin3A or SMRT/N-CoR. Human HDAC11 does not associate with them but can interact with HDAC6 in vivo. It has been suggested that HDAC11 and HDAC6 may use non-histone proteins as their substrates and play a role other than to directly modulate chromatin structure. In normal tissues, expression of HDAC11 is limited to kidney, heart, brain, skeletal muscle and testis, suggesting that its function might be tissue-specific. In mammals, HDAC11 proteins are known to be involved in progression of various tumors. HDAC11 plays an essential role in regulating OX40 ligand (OX40L) expression in Hodgkin lymphoma (HL); selective inhibition of HDAC11 expression significantly up-regulates OX40L and induces apoptosis in HL cell lines. Thus, inhibition of HDAC11 could be a therapeutic drug option for antitumor immune response in HL patients.	5.25766e-133
AP019193.1\|BBG84442.1\|1764386_1765388_+\|tetraacyldisaccharide-4'-kinase	gnl\|CDD\|234808	PRK00652, lpxK, tetraacyldisaccharide 4'-kinase; Reviewed.	3.80612e-175
AP019193.1\|BBG84446.1\|1767500_1769351_+\|UvrABC-system-protein-C	gnl\|CDD\|234792	PRK00558, uvrC, excinuclease ABC subunit UvrC.	0
AP019193.1\|BBG84445.1\|1766667_1767312_+\|DNA-binding-response-regulator	gnl\|CDD\|236538	PRK09483, PRK09483, response regulator; Provisional.	3.35889e-165
AP019193.1\|BBG84447.1\|1769655_1770210_+\|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	gnl\|CDD\|182763	PRK10832, PRK10832, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase.	2.33554e-83
AP019193.1\|BBG84441.1\|1762617_1764387_+\|lipid-A-export-ATP-binding/permease-protein-MsbA	gnl\|CDD\|183016	PRK11176, PRK11176, lipid A ABC transporter ATP-binding protein/permease MsbA.	0
AP019193.1\|BBG84444.1\|1765693_1766455_+\|3-deoxy-manno-octulosonate-cytidylyltransferase	gnl\|CDD\|235473	PRK05450, PRK05450, 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional.	1.88185e-154
AP019193.1\|BBG84443.1\|1765508_1765697_+\|UPF0434-protein	gnl\|CDD\|183328	PRK11827, PRK11827, protein YcaR.	4.72507e-22
AP019193.1\|BBG84440.1\|1760183_1762385_+\|DNA-internalization-related-competence-protein-ComEC/Rec2	gnl\|CDD\|236924	PRK11539, PRK11539, ComEC family competence protein; Provisional.	7.69186e-112
AP019193.1\|BBG84434.1\|1753859_1754903_+\|outer-membrane-protein	gnl\|CDD\|225744	COG3203, OmpC, Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane].	6.44439e-38
AP019193.1\|BBG84433.1\|1751406_1753560_-\|ATP-dependent-DNA-helicase-DinG	gnl\|CDD\|236966	PRK11747, dinG, ATP-dependent DNA helicase DinG; Provisional.	0
AP019193.1\|BBG84436.1\|1756250_1757441_+\|aromatic-amino-acid-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
AP019193.1\|BBG84435.1\|1755133_1756075_+\|hypothetical-protein	gnl\|CDD\|180519	PRK06298, PRK06298, type III secretion system protein; Validated.	0.00206293

>AP019193.1|BBG84440.1|1760183_1762385_+|DNA-internalization-related-competence-protein-ComEC/Rec2
MDLRLLSFALGASSSLLWPWLPSWEWGGLMLLLAFPLAGYRCWRLLFLLCGILWMQGSLHYRLAWLDQLGKKTSHIITAQLQSAEPEGDKFIRLVLRVNRLDEQALTPAPLVRINAYQTLPAMPASSRLTLVVSLKPAHGLANEAGMDGRRLLLGKGITATGNLRRVIQIEPAQTGLRERWLARAAASWQDLTHGPLLAALTFGEQGGITDEQWSLFRGSGLTHIIAISGQHIALVAVLGWWLGRLFGLRGAILVALLFAALYSWLAGFAVATERALIMVLVWSLLRWRRREWPAHRIWLWAFVVLTLWDPFALYSAGFWLSFLAVALLLVASLLEAKPGLIRLQGLLLLGLLPLQLALFEGIAPLSLLLNLLALPLFCIGIIPLALIGVLLAPLSGELAHLLFWLADVGLQWVLWALTRLASQWQLWWPVPGWVLPFTALLTLLWCAWHVPGGRPLLLPGGVALLLAAWPAPTHWQLRVLDVGQGLAVLITRGERGILFDTGDRYPGGYNMADAVILPLLNRLDVRVLDYLVISHKDRDHAGNRRAILQALPVRHELSSFDFGRFTALCRRGQQWRWQGLEMAVLWPQQPGPGHNNDGCVLQIRDGERRILLSADIERQAEQRLLALEGEGLASTLLVSPHHGSRTSSTAPFVAAVAPRYVVHSAGFMNQWGFPRPEVVARYQEAQQWVTGLDGDILVEPAPSGLRIRAEREQGPWFRRKGDWWRPAFWPDR
>AP019193.1|BBG84439.1|1759637_1760156_-|flagellar-biosynthesis-protein-FlhF
MPKRLIQRWLPDPATLKEHKHLRLFGKLLLDANLWHLNRRSAAGAFAVGLFMAWVPLPCQMLLAAGGAIACRVNLPLSVALVWLSNPFTMPPLFYGAYLTGCQLLGQSSQHIEIEFTWAWLVSVFETVAPPLLLGSLVLALLSSLIGYALIRTCWRISTVRQWQKRKVARAC
>AP019193.1|BBG84438.1|1759149_1759644_-|hypothetical-protein
MLNRWFARFKIDPDTLRQQKWFSLFGERLLAPALWQGGPRALSGAVAAGIFACWFPIPMHSLIAVGLALAFSLNLPLALLAVWFNNPLTLPFMYLYAYRTGCLVLHKTPEPFHLTWTLHWLEHEAATLVPPFLLGSLLLAVLTAASGGLLTLLLLRLGKLVRSR
>AP019193.1|BBG84437.1|1757518_1759027_-|hypothetical-protein
MAEPLTLAHANGHPLALLPAMANRHGLITGATGTGKTITLQVLAEGFSRLGVPVFLADVKGDLSGLGAAGAGSAKLDARLAQLGIPAPAFAASPTLFWDLFAEQGHPVRATVSDMGPLLLARLLGLNDTQSGVLELVFKVADDEGLLLLDLKDLRAMVQFAGDNAKSLTTRYGNVSTASIGAILRNLLTLESAGGDHFFGEPMLDIQDLLQTDEAGHGHINVLAASKLTQSSRLYACFLLWLLSELFEQLPEVGDPDKPVLVFFFDEAHLLFNDAPKALLEKIELVVRLIRSKGVGVYFVTQSPADIPDSVLGQLGNRVQHALRAFTPSDQKAVRIAANTLRANPAFDAAGVITELGVGEALVSLLDEKGRPSMVERAFIAPPASRIGPLSEAERQTLIQGSLLHGRYETPEDRESAFERLNGGKGTTTGEQGSEPSSNGEGGLLDTLNGILFGRTGPRGGQHDGVVQTAAKSVARTIGSEVGRQLVRGVLGSLLGGGKRRR
>AP019193.1|BBG84436.1|1756250_1757441_+|aromatic-amino-acid-aminotransferase
MFEKVVAAPADPILGLTEAFRADSRSHKINLGVGIYKDETGATPILHCVKKAEQKLLTDEKTKNYLGIEGNIEYGRIVQQLLFGQDSALVASGRAKTAQAPGGTGALRIAAEFVVRNGLAKTIWISDPTWANHVSVFQAAGLSVKWYKYYDAASKGLDFAAMQASLAEVQAGDLVLLHGCCHNPTGIDPTADQWRALAKQSAAAGWLPLFDFAYQGFARGIEEDAEGLRIFAECHDELLVASSFSKNFGLYNERVGAFTLVSATKEIADVAFTQVKTVIRANYSNPPSHGAAVVTAVVSDPALYAEWVEEVAAMRVRIREMRELLVEKLAARGVNQDFSFIREQNGMFSFSGLSKDQVERLKSEFAIYIVGSGRISVAGITRANIDPLCDAIAKVL
>AP019193.1|BBG84435.1|1755133_1756075_+|hypothetical-protein
MIDFSHPQWRELARQLLDNPTSVVRARQWQPLLGLLKDNQLLLALGNHHYELTPAGRRYLTRELTLAEIATAPPTPEEWLHGQGWLLAEQVNERVLSALYRKSEVSFSPNEQIDFEDKGIRLCADQLLRLRASEPFSLFFSGGTLLDAAPWLQALGEVALPERNLAGLGKILWGEGELLRVITTDSVGAFAELMLPVGTLLVWAPASAQQALQQVIAALPPQVQWSHLTSLDPSGVDRVLTLAQRLGRPASWWLPTALAPIMVAYALPLIDSRPWEPSRIPKSLLAVCSGLVESNGGLSAEVCALAPQWHTIG
>AP019193.1|BBG84434.1|1753859_1754903_+|outer-membrane-protein
MKKTILAIAIPALFASAANAAVIYDKDGTTFDVYGRVQANYYGEHNDIDSELQGSTRLGWSGKVALNNTWSGIAKTEWQVAAENSGNKTSDIDPRHIYAGFDGSQYGKIIFGQTDTAFYDVLEPTDIFNEWGDVGNFYDGRQEGQIIYSNTYGGFKGKLSYQTNDDVAVKVTDVGQGIKEDAVYGENVKRNYGYAAAAGYDFDFGLGLNAGYAYSDLENSKTNTTGDKKEWALGAHYAINGFYFAGVYTQGDLSYDTTTGGDKDKGRGYELAASYNVDAWTFLAGYNFAEGKANSNVSGAEYKDIVDETLLGVQYAFTSKLKAYTEYKIQGIDKLDDEWTVALQYNF
>AP019193.1|BBG84433.1|1751406_1753560_-|ATP-dependent-DNA-helicase-DinG
MRCHMPRPGLPVAGILFPFTCATVIFFMLSTRLKTTIRNTYRQIADGLPGFVPRKEQNFLVAEIAKTLTGEYDKQRRILVAEAGTGIGKSLSYAQGAIPVARLTQKKLVISTATVALQEQLIHKDLPFYHRHSELPFRFMLVKGRQRYCCEHLLEQAASGSEMANFEFDFGSLSKHKPSDADKSCYQALWQAYTDGKWDGDRDNWPKPITDLCWDRIAADRHTCNKALSHHQHCPFHRARNDMDAADVLVVNHALLLSDLTMGGGIILPPPDECIYVLDEAHHLPTIARDHGAASASVKGSRRWLEKLAQGAGKLARTLNKESLLDPQLKLQDALASLQPDLKALEQWLAANDRLFNEEKHCRFADGVLPDPLPMLAENLKEASKKALRALDRMQGAIGEALKDGEIRRKEAEPLLAESGFYLQRLEGFCALWEMLGRHVAQGKTPLARWMVKSDDGDIWLHASPIEVGYLLEEWLWSRCLGAVLVSATLTALSSFSYFRHQVGLKEHDGTRYLRLRSPFDYQKAELYLPKMEHEPSAPAFTRELISTLPRLLAGKEASLVLFSSYRQMNEVAVGLRAKGISLLVQGEASRNALLTLHKQKCDGGQASILFGTGSFSEGLDLPGHYLTNLVITKLPFAVPNSPVEEATAEWVEKRGGNPFLQLTVPEASRKLIQACGRLIRKEADRGRVTILDRRLLTKRYGKGLLDSLPPFSRRIE
>AP019193.1|BBG84432.1|1750573_1751233_-|DUF2057-domain-containing-protein
MKLTVLVPALAGLLWAGSALADAQLEVTNPYVVQLIDGQSINPKLLDKTSTYPIKAGKHQLVVAFEGNYSSRSETKLVTAEPLVINFTAADNQKLVLDYKKPRNEAEAKKFVKEQKVALKDESSNQVVASEQFVLPKVEGFQLTRDYQQELLNMGKAFNQPATVAVSNAAVMAANSAPVQVAPSKAQSNPEALTQLQNWYNKADAETRKAFQIWVIQQQ
>AP019193.1|BBG84431.1|1749592_1750489_-|histone-deacetylase
MSLRIFYHPLYSALALPARHRFPLAKYQALFERLGSLGYPLAEAAPATPEQIKRVHDAAYVEAALAGTLDAGAIRQLGFPWSPLLMERTLRSVGATLAASRHALEQGCGLQISGGYHHAHRDIGSGFCLFNDLVIAAQVCLDEGRCEQVLIVDLDVHQGDGSAALCQGRRDIITLSLHGEHNFPRHKPASHMDFPLPSGMADDAYLTTLAEALNLALRLYTPDLILYQAGVDVHQGDELGYLALSDEGVRQRDAMVFDCALRHGLPIAAVPGGGYRRDWQQLIPLHMSLFEEAKKRYG
>AP019193.1|BBG84441.1|1762617_1764387_+|lipid-A-export-ATP-binding/permease-protein-MsbA
MQQETSQDSWPVFKRLLGYVRDRKLGLIGGIIGMLGYAAVDTTFVYSIKPLIDQGINGNDPTVLKWMPFFVLGIVALRGVANFLSNYCMAWVGNHVVMRLQQQVFNHMVAMPMSFFDRQNTGHLLSKVTYDASQVSSAASTTLVTLVREGATVIGLLGLMFWHSWQLSVIFLVVGPVVGIIIGLISRRFRQISRHIQQAVGDITTSTEQMLKGHKEVLMFGGQKVEEKRFFKVSNNMRQQTMKMVAADAIGSPVVQMVASIALAAFLYVATIDSVRSELTAGTFTVMITSMMMLLKPLKSLTDVNNQFQRAITACHSLFGLLDTEPEQDTGTRTLERARGEIEFRNVTFTYPTKDTPALHNVSFKVEAGKSVALVGRSGSGKSTIASLLTRFYDIEQGEILLDGVNIRDYRLSELRKQYALVSQHVHLFNDTVASNIAYAAEEKYSLDEIKQAARIAHADEFVSKMSNGYDTVVGENGASLSGGQRQRIAIARALLRDAPVLLLDEATSALDTESERHIQAAIDELCKARTSLVIAHRLSTIEKADEILVIDEGHIVERGNHAALMAQQGTYAQLRAIQFGHATAGGNA
>AP019193.1|BBG84442.1|1764386_1765388_+|tetraacyldisaccharide-4'-kinase
MLERLWYAKSGWRWLLAPFALLFAVISGTRRYAYRHGWRKGYRASVPVIVVGNISVGGNGKTPVVIWLVEQLQACGYRPGVVSRGYGGKAPHYPYRLDETSTTAQAGDEPVLIARRCGCPVVVAPKRADAVRLLEQSGEVDIIITDDGLQHYALARDIELVVVDGARRFGNACLLPMGPLREPVTRLKRVDAIICNGGEPGRGEYPMRLVADAPRRVRDEAPLATQLTGPVDALAGIGHPPRFFATLEGLGYQLDQRVAYGDHHPFDRDELVGRFAGKPLLMTEKDAVKCRPFALDNWWYLPVSAELPASLLDTLLHKLGASGKGQGVTKAQG
>AP019193.1|BBG84443.1|1765508_1765697_+|UPF0434-protein
MALDIKLLDIIACPVCKGKLHYNKAVHELVCRFDKLAYPLEEGIPVLLENRARPLSSDELSS
>AP019193.1|BBG84444.1|1765693_1766455_+|3-deoxy-manno-octulosonate-cytidylyltransferase
MSFVVVIPARYASTRLPGKPLADIHGKPMVQHVVEKALQSGADRVIIATDDERVQQALAACAGQAGFEVCMTSKDHQSGTERLAEVCRHYGFAADTIVVNVQGDEPLIPPVIIRQVADNLAAATAPMATLSVPIRDAEEVFNPNAVKVVTDQEGYALYFSRASIPWDRDRFAANREQIGDHYQRHIGIYAYRAGFIQRYVDWAPSLLEQIEALEQLRVLWYGEKIHVAQALEAPPVGVDTQADLDKVRALLAN
>AP019193.1|BBG84445.1|1766667_1767312_+|DNA-binding-response-regulator
MINVFLVDDHELVRTGIRRILEDVRGIKVVGEAQSGETAVTFCRQHHPDVILMDMNMPGIGGLEATRKILRIRPDVRIIVLTIHSENPFPTKVMQAGAAGYLTKGAAPDEMIHAIRLVHSGQRYISPEIAQQMALSQFASADENPFKSLSERELQIMMMITKGQKVTDISEQLNLSPKTVNSYRYRLFSKLNINGDVELTHLAIRYGMLDADTL
>AP019193.1|BBG84446.1|1767500_1769351_+|UvrABC-system-protein-C
MTSSEPLFDSKAFLSAVTHQSGVYRMYDSGGTVIYVGKAKDLKKRLASYFRANVDSIKTRTLVRQIADVQVTVTHTETEALILEHNLIKQYQPRYNVLLRDDKSYPWIIITAHQHPRIGVHRGARKVKGEYFGPYPSGGAVRESLHLMQKIFPVRQCEDAVYANRSRPCLLYQLKRCAGPCVAGLVSEAEYAQQVELAKLFLAGKNQQVIGELVGKMESASGDLRFEEAARYRDQIQALRRVTEQQSVSGNVLDELDVVGVAFEQGTACIHVLFIRQGKVLGSRSYFPKVPADTQLDEVVQSFLLQFYLSGQGGRQIPSEVLLDVALEDENVIAETLSQTAGYKVRVVSRTRAERARFIKLASINAQTALRSRLAHKSTTTARYDQLEELLELERPIARMECFDISHTMGERTVASCVVFNREGPLSSEYRRFNIDGITGGDDYAAMEQALERRFGKQQEPDKVPDVLFIDGGLGQLRRAEEILARQLEFLGGKYPLLVGIAKGVTRKAGLETLILGESHEELHLPADMPALHLIQHIRDESHRFAITGHRARRAKARTTSTLEDIPGVGPKRRQALLKYLGGLQEVKKAGVEELAKVPGISQELAQSIHDALHSL
>AP019193.1|BBG84447.1|1769655_1770210_+|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase
MTNIPNLLTFFRILLIPVFVILFYLPYQWSYLAAAIVFILAAATDWFDGYLARKLNQSTAFGAFLDPVADKIMVAAALVVIVEHYNTIWVTIPAMTMIGREIIISALREWMAELGKRSSVAVSWIGKWKTMIQMVSLTGLIWQYDIWMVWLAYVLLYVATVLTFWSMFQYMKAAWGDLTYHSRF
>AP019193.1|BBG84448.1|1770881_1771694_-|hypothetical-protein
MMVITKSSVWQMSTTIAVLLLQGASFGAWADGEQICSLKQLAAIKTRLPSNTELTSHACKTLPNQPEMTLISYIFPKTKTEEHNDEMTLPTSVWRVELISHGQVKQQFEEIIEEDASIRIHSSSIWLDTAPYILAERERAFGVRLDIGDGPSCADGFRSRFLHLFRQHNGTLQRIMNGAPMLHTYIRKGVPCSPEKIDLERGISYIQVLPNMSHGLHDLKVVTKAKTETHNPDGSSRPISQRTLSTTLRFNGHEYPVGEWNNLPSKEWWE
>AP019193.1|BBG84449.1|1772028_1772565_+|hypothetical-protein
MTTVHVSWQMRACGLVVALLGIGGFWMAMILGAEFLDLLALTPADPLRMNDWRGWFAIFIGLFATPFMLCAGGRLMFSIAIPEPDLSSIAVKRRGIIVMSMIIVAAVLGLLMQKISMSSIERLGWEQCYVKQMSWRFGKEVYSQNCGAQGLMKLDQALDKLSLEALKEKLNKEMFEQK
>AP019193.1|BBG84450.1|1772951_1773314_+|hypothetical-protein
MAQSLADIDLCEALSDLFVDNEVDFELIAQVARGFPVAHVEMVLFEWVAPVCYTNTLTPVPPIWTGFERDSLWAEIQCLLAREAKAGSAKKLSIMLRQFYLRQRFAEEWRRLSVLLVGKE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: AP019193_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP019193_8

2357386-2357510

Orphan

Consensus_repeat	Method
TTATCTGCGCTGGGCCAGATGCATCATGGCTTCCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of AP019193_8

>merge|AP019193|8|2357386-2357510|CRISPRCasFinder
TTATCTGCGCTGGGCCAGATGCATCATGGCTTCCAACACGGCGCCGCCCGTTGATGACGCGGGCCTTGCCGATAGGCTCTATGTTCGCGTTTATCTGCGTTGGGCCAGATGCATCATGGCTTCCA

>AP019193|8|8|2357386-2357510|CRISPRCasFinder
TTATCTGCGCTGGGCCAGATGCATCATGGCTTCCA	ACACGGCGCCGCCCGTTGATGACGCGGGCCTTGCCGATAGGCTCTATGTTCGCGT
TTATCTGCGTTGGGCCAGATGCATCATGGCTTCCA

Protein	Signature genes	Signature genes Name	Protein_function
AP019193.1\|BBG84937.1\|2345761_2346319_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377782
AP019193.1\|BBG84942.1\|2352424_2353642_+\|peptidase	unknown	unknown	gnl\|CDD\|183836
AP019193.1\|BBG84948.1\|2360054_2360570_+\|molybdenum-cofactor-cytidylyltransferase	unknown	unknown	gnl\|CDD\|274516
AP019193.1\|BBG84951.1\|2365540_2366317_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|132355
AP019193.1\|BBG84943.1\|2353760_2355185_+\|dihydropyrimidinase	unknown	unknown	gnl\|CDD\|236240
AP019193.1\|BBG84955.1\|2372423_2373827_+\|permease	unknown	unknown	gnl\|CDD\|225161
AP019193.1\|BBG84941.1\|2351108_2352308_+\|PLP-dependent-lyase/thiolase	unknown	unknown	gnl\|CDD\|236186
AP019193.1\|BBG84949.1\|2360990_2364101_+\|putative-selenate-reductase-subunit-YgfK	unknown	unknown	gnl\|CDD\|236630
AP019193.1\|BBG84939.1\|2347391_2349365_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226350
AP019193.1\|BBG84954.1\|2370848_2372165_+\|guanine-deaminase	unknown	unknown	gnl\|CDD\|236419
AP019193.1\|BBG84950.1\|2364131_2365460_+\|chlorohydrolase/aminohydrolase	unknown	unknown	gnl\|CDD\|132357
AP019193.1\|BBG84938.1\|2346330_2347215_+\|transporter	unknown	unknown	gnl\|CDD\|223751
AP019193.1\|BBG84940.1\|2349721_2350981_+\|knotted-carbamoyltransferase-YgeW	unknown	unknown	gnl\|CDD\|235961
AP019193.1\|BBG84953.1\|2369306_2370824_+\|xanthine-permease	unknown	unknown	gnl\|CDD\|274468
AP019193.1\|BBG84956.1\|2374158_2376477_+\|xanthine-dehydrogenase-molybdenum-binding-subunit-XdhA	unknown	unknown	gnl\|CDD\|236637
AP019193.1\|BBG84945.1\|2356393_2357317_+\|permease	unknown	unknown	gnl\|CDD\|273359
AP019193.1\|BBG84936.1\|2345428_2345569_+\|TIGR02808-family-protein	unknown	unknown	gnl\|CDD\|131855
AP019193.1\|BBG84952.1\|2366313_2369211_+\|selenate-reductase-subunit-YgfN	unknown	unknown	gnl\|CDD\|182084
AP019193.1\|BBG84944.1\|2355280_2356213_+\|carbamate-kinase	unknown	unknown	gnl\|CDD\|237071
AP019193.1\|BBG84947.1\|2359087_2359936_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274467

Protein	Function_ID	Function_description	E-value
AP019193.1\|BBG84937.1\|2345761_2346319_+\|hypothetical-protein	gnl\|CDD\|377782	pfam07152, YaeQ, YaeQ protein. This family consists of several hypothetical bacterial proteins of around 180 residues in length which are often known as YaeQ. YaeQ is homologous to RfaH, a specialized transcription elongation protein. YaeQ is known to compensate for loss of RfaH function.	6.43965e-103
AP019193.1\|BBG84942.1\|2352424_2353642_+\|peptidase	gnl\|CDD\|183836	PRK13004, PRK13004, YgeY family selenium metabolism-linked hydrolase.	0
AP019193.1\|BBG84948.1\|2360054_2360570_+\|molybdenum-cofactor-cytidylyltransferase	gnl\|CDD\|274516	TIGR03310, matur_MocA_YgfJ, molybdenum cofactor cytidylyltransferase. Members of this protein include MocA, which transfers cytosine from CTP to molybdopterin during molybdopterin cytosine dinucleotide (MCD) cofactor biosynthesis. It is distantly related to MobA, the GTP:molybdopterin guanylyltransferase. The MocA family is particularly closely related in phylogenetic distribution to other markers of selenium-dependent molybdenum hydroxylases (SDMH), suggesting most SDMH must use MCD rather than molybdopterin guanine dinucleotide.	2.52571e-70
AP019193.1\|BBG84951.1\|2365540_2366317_+\|oxidoreductase	gnl\|CDD\|132355	TIGR03312, Se_sel_red_FAD, probable selenate reductase, FAD-binding subunit. This protein is suggested by Bebien, et al., to be the FAD-binding subunit of a molydbopterin-containing selenate reductase. Our comparative genomics suggests it to be a subunit of a selenium-dependent molybdenum hydroxylase for an unknown substrate.	5.44171e-155
AP019193.1\|BBG84943.1\|2353760_2355185_+\|dihydropyrimidinase	gnl\|CDD\|236240	PRK08323, PRK08323, phenylhydantoinase; Validated.	0
AP019193.1\|BBG84955.1\|2372423_2373827_+\|permease	gnl\|CDD\|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	3.61398e-148
AP019193.1\|BBG84941.1\|2351108_2352308_+\|PLP-dependent-lyase/thiolase	gnl\|CDD\|236186	PRK08206, PRK08206, diaminopropionate ammonia-lyase; Provisional.	0
AP019193.1\|BBG84949.1\|2360990_2364101_+\|putative-selenate-reductase-subunit-YgfK	gnl\|CDD\|236630	PRK09853, PRK09853, putative selenate reductase subunit YgfK; Provisional.	0
AP019193.1\|BBG84939.1\|2347391_2349365_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|226350	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms].	6.16659e-175
AP019193.1\|BBG84954.1\|2370848_2372165_+\|guanine-deaminase	gnl\|CDD\|236419	PRK09228, PRK09228, guanine deaminase; Provisional.	0
AP019193.1\|BBG84950.1\|2364131_2365460_+\|chlorohydrolase/aminohydrolase	gnl\|CDD\|132357	TIGR03314, Se_ssnA, putative selenium metabolism protein SsnA. Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown.	0
AP019193.1\|BBG84938.1\|2346330_2347215_+\|transporter	gnl\|CDD\|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	1.71722e-31
AP019193.1\|BBG84940.1\|2349721_2350981_+\|knotted-carbamoyltransferase-YgeW	gnl\|CDD\|235961	PRK07200, PRK07200, aspartate/ornithine carbamoyltransferase family protein; Validated.	0
AP019193.1\|BBG84953.1\|2369306_2370824_+\|xanthine-permease	gnl\|CDD\|274468	TIGR03173, pbuX, xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.	6.07511e-148
AP019193.1\|BBG84956.1\|2374158_2376477_+\|xanthine-dehydrogenase-molybdenum-binding-subunit-XdhA	gnl\|CDD\|236637	PRK09970, PRK09970, xanthine dehydrogenase subunit XdhA; Provisional.	0
AP019193.1\|BBG84945.1\|2356393_2357317_+\|permease	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	2.52672e-17
AP019193.1\|BBG84936.1\|2345428_2345569_+\|TIGR02808-family-protein	gnl\|CDD\|131855	TIGR02808, hypothetical_protein_VF_1902, TIGR02808 family protein. This very small protein (about 46 amino acids) consists largely of a single predicted membrane-spanning region. It is found in Photobacterium profundum SS9 and in three species of Vibrio, always near periplasmic nitrate reductase genes, but far from the periplasmic nitrate reductase genes in Aeromonas hydrophila ATCC7966. [Hypothetical proteins, Conserved].	8.65195e-17
AP019193.1\|BBG84952.1\|2366313_2369211_+\|selenate-reductase-subunit-YgfN	gnl\|CDD\|182084	PRK09800, PRK09800, putative hypoxanthine oxidase; Provisional.	0
AP019193.1\|BBG84944.1\|2355280_2356213_+\|carbamate-kinase	gnl\|CDD\|237071	PRK12353, PRK12353, putative amino acid kinase; Reviewed.	0
AP019193.1\|BBG84947.1\|2359087_2359936_-\|hypothetical-protein	gnl\|CDD\|274467	TIGR03172, Uncharacterized_protein_YqeC, probable selenium-dependent hydroxylase accessory protein YqeC. This uncharacterized protein family includes YqeC from Escherichia coli. A phylogenetic profiling analysis shows correlation with SelD, the selenium donor protein, even in species where SelD contributes to neither selenocysteine nor selenouridine biosynthesis. Instead, this family, and families TIGR03309 and TIGR03310 appear to mark selenium-dependent molybdenum hydroxylase maturation systems. [Unknown function, General].	1.33573e-82

>AP019193.1|BBG84945.1|2356393_2357317_+|permease
MNSKLNMAALGGLVLLTAIWSYSWIVMKQVMLYAGAFEFTALRCLCGSLVLLLVQCLRGRQYLTPTPFRYTLAIALFQTCGMVGLAQWALISGGAGKVAILSYTMPFWVVIFAALFLGERMRKLHYLAVGVAACGLLLVVEPWQLHLDSMKSALLGIASGICWGISAIIAKRMYARHPSVDLMSLTTWQMIYATLVMALVAALAPERPIDWQPYVFGALAYSAIFATALAWSLWLFVLKKLPAGIAGLSTLAVPVSGVLLSWWLLGENPGPVEGSGIALIVLALIVISRTGKRSLVSVAGETRVKHG
>AP019193.1|BBG84944.1|2355280_2356213_+|carbamate-kinase
MKQRIVLALGGNALGNNLPEQMKAVQSTAGTIADLIAQGHEVVVTHGNGPQVGMIQQAFEVAARHDPKAPHLPMSVCVALSQGYIGYDLQNALREALLVRRIHKPVATLVTQVEVDKNDPAFLDPSKPIGGFFSKEEAEALMAKGERLKEDAGRGYRRVVASPKPVDIIEKETVSAMLAAGQVVITVGGGGIPVLREGNHLRGASAVIDKDWASARLAELIDADMLIILTAVEKVAINFGKPEVQWLDTLSVADANSFIAQGQFAKGSMLPKVEAALSFATSMAGRRSLITLLEKAADGIAGKTGTLISL
>AP019193.1|BBG84943.1|2353760_2355185_+|dihydropyrimidinase
MKRLIKNGVLVDAQGEYRQDLLIEDGVIRARATDIQSDGETELIDASGCYVMPGGIDVHTHFNIDVGIARSCDDFFSGTRAAACGGTTTIVDHMGFGPAGCNLHHQLARYHDYAATQAVVDYSFHGVVQHVDDAILHEMAAMVQEEGISSFKLYLTYQYKLGDHDVLRALARLKEVGALATVHPENDAAIAVRRAALLAAGHCEPWYHPQSRPLQCEAEAIARMINLAGLAGNAPLYIVHLSNGLGLEYLKLARRQGQPVWVETCPQYLLLDEQCYYKENGVDYLLSPPLRSRREQDKLWVGIAAGDIDTVATDHCNFSHAQRMTLSGGDFSRCPNGLPGVENRMLLLFAHGVLGGRISPSRFVALTSANPARLFGLWPRKGNLQLGSDADLVVMDPRGDTLISHPLLHDNGDYSPYEGMRCSGQIRLTLSRGEIVARDGEFLGRRGHGRFLARAPFDPALAPDRHSPCPTVAG
>AP019193.1|BBG84942.1|2352424_2353642_+|peptidase
MSKQIPFEMVLEKAYQYKAEMTQFLRDMIAIPSESCDEERVVLRIKQEMEKVGFDKVEIDPMGNVLGYIGHGPHLIAMDAHIDTVGVGNMANWTFDPYEGMEDHEIIGGRGASDQEGGMASMVYAGKIIKDLGLEDQYTLLVTGTVQEEDCDGLCWQYIIEQSKIRPEFVVSTEPTDCQIYRGQRGRMEIRVEVQGVSCHGSAPERGDNAIFKMGPILGELQALSHNLGNDDFLGKGTLTVSEIFFTSPSRCAVADSCAVSIDRRLTWGETWQGALDEIRALPAVQAAGAEVSMYQYDRPAYTGLVYPTECYFPTWKVEEDHITVKTLSKAYTQLFNKAPVVDKWTFSTNGVSIMGRHGIPVIGFGPGKEPEAHAPNEKTWKEHLVKCAAMYAVIPMLYLAELDK
>AP019193.1|BBG84941.1|2351108_2352308_+|PLP-dependent-lyase/thiolase
MSQFSLKMEIADNRFFTGESLPLFSRTEAQKARAFHKKLAGYEPTPLCDLKALAAYIGVKNILVKDESKRFGLNAFKMLGGVYAIANLLCEKYGVAVEDFTFDLIKRTIKEPMTFATTTDGNHGRGVAWAAKQVGQHAVVYMPKGSAQERVDHILALGAECIVTDMNYDDTVRLTMKMAEERGWYIVQDTAWEGYTKIPTWIMQGYATLADEAVEQMQAMGIKQPTHVLLQAGVGALAGGVLGYLVDCFGAKNLHSIVVEPDQADCIYRSGVAGEMVNVGGDMRTIMAGLACGEPNPLGWPVLRGCTTQFISCHDKVSALGMRVLGNPLGDDPRIISGESGSVGTGVLAAVRHHPDRAALMARLGLDEQSVVLVINTEGDTDVAHYREVVWEGKHPACG
>AP019193.1|BBG84940.1|2349721_2350981_+|knotted-carbamoyltransferase-YgeW
MALVSVTCEWKGSNAFLINRLGLTMKAVNQLIKEINELKSNLHEKDFLLTWEQTPQELALVLKLAEALKGLRAENIATKLFNTGLGISVFRDNSTRTRFSYASALNLLGLTQQDLDEGKSQIAHGETVRETANMISFCADAIGIRDDMYLGAGNAYMREVGAALDEGFEKGVLPQRPALVNLQCDIDHPTQSMADLAWLQEHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVIEVAKENAKASGGSFRQVTSMEEAFKDADIVYPKSWAPYQVMEQRTELLRANDHAGLKELEQHCLAQNAKHKDWHCTEEMMALTKGGEALYMHCLPADISGVSCKEGEVSEGVFEKYRIATYKEASWKPYIIAAMIVARKFSAPGAALEGLIKEAQKRVK
>AP019193.1|BBG84939.1|2347391_2349365_+|sigma-54-dependent-Fis-family-transcriptional-regulator
MNPTRGGSQGIYNMMSVSNQCLLMQIQPTILRFAKMLASVLQLEVEIVDANMVRVAGTGPYGKFFGRQLEGDSRLLRYVIEHQREKIVTHTSEDPVCEGCSCKESCRERAFLGVPIMVEENCIGVISLVAFNPEQQARLNNNLQEVCDYVQHISSIFVAKLLDSRGLSDGVNKVFLSLMNHMDQGCLLLDEKSQVLYANEVALKQLNCQQEALLGCEIGLRPLTFAQQGLTGHLQHIVTLGERQELIIGQLHHVQGQQLFLMAFHQSHGTPSQPLEPDEGVSMLIGESKPMRALKKLLHRIALSPSSVLVCGESGTGKEVVARAIHRLSPRRDKPFIAINCAAIPEQLLESELFGYVKGAFTGASSTGKQGLIQAAQQGTLFLDEIGDMPLTMQAKLLRVLELREVTPIGASRPVPVDIRIIAATHQHLEQYIAEGKFREDLFYRLNVIPIHLPPLREREGDVALLTHYFLNLHTSRIGLLYPGLSPEVMALLEGYRWPGNVRELSNLIEYLVNVVQAGEVIESILLPPNILRNQRSGADEPPRSTAQIARMPLSPDPYSHGVLADPALSPAAGNPASTTGTPWSSPEASLPEPAAGQVERGLALPLGENGLENMEKQMIEETLLRLGNKKLAAQALGIGIATLYRKIKKYEIAVQA
>AP019193.1|BBG84938.1|2346330_2347215_+|transporter
MFSALLNIVIPVFAVVGLGALYGRLRPGGALGYVNRANIELFTPALVFSALVKYPLDLMAHLSLIAAGALVILLPGLLLSLLRLRSISRPALILPAMFRNTGNLGIPLMVLAFGEQQLGAIIILFVLSNLLHFSVGMFILSANTSRWLWLKSPVLWAALAGLLVANLHIPLPEYLVTSASLLGQISVPLMLFALGIRLMEGELDHLGLALKCNLLYLLAGGISLGLAVWLLPLQPAWVPLLMLSVALPPAVLNYMLCEQYQCQPEKVASIVLGGNALSVVVIPLAVWLALHLGS
>AP019193.1|BBG84937.1|2345761_2346319_+|hypothetical-protein
MALKATVFKAQLSLSDMDRNLYQDFSLTLARHPSETDERMMIRLAAFAWHAAERLEFTKGLSADDEPELWRKNYSDEIELWIELGQPDERRLKKACNRSRHVVLYLYGGRGTSVWWKQNQGKLGLHDNLTVIELSDSQTLPLTEMVERTMQLTCTISDGQLWVSNGRQEVTLDPVLLMGTPAREL
>AP019193.1|BBG84936.1|2345428_2345569_+|TIGR02808-family-protein
MSLLEQTIWTVLGYGAMPFIFLSGFVAVAVTCCLLLNAFGVKSAEK
>AP019193.1|BBG84947.1|2359087_2359936_-|hypothetical-protein
MAISSPILLTSPNIESVLNPLTENIDGRTTLISLCGAGGKTSTLFWLADYFHQKGKKVLLTTSTRMFLPAPSSRRTLLIEADPIRQLTRCQALPDEPMQLVLFSHLDRASGKAVGPSPQQIDLLKGQQRFDIILVEADGAHHKLLKAPALHEPCIPQHSDWVIALVGGAMVGASADPAQIHRWAEFQALCGIAAGERLDWALFDRLIAHPEGAFKGTPPGARRVWFINGDYQNEQQWLPALINLLQRHPELHAIWQGAVREPGAIHHVCCRPASEAAQSLTR
>AP019193.1|BBG84948.1|2360054_2360570_+|molybdenum-cofactor-cytidylyltransferase
MLPYRQSTILDESLKNALVLCDRVILVVGHRADELISRYANHPRIRLVHNHDYAQGLGSSIRAGLAACSSDHLFISHGDLPCIPPEVYRTLWQARGDETLFPSHQGEAGHPVLLPRALARTLAAAPVQGSVRRWLLAHPHRFIEVQSAAILQDVDTQERYQALLANEAFGR
>AP019193.1|BBG84949.1|2360990_2364101_+|putative-selenate-reductase-subunit-YgfK
MGDIMRPVPFKNLLTRIFSEYKASQSIFGIPAAQFYRKQDERKIKVFGETCETPIGPAAGPHTQLAQNIVTSWLTGGRFIELKTVQILDRLELEKPCIDAEDECFNTEWSTEFTLPKAFDEYLKAWFALYLLEEVFDPRLDGEAKSFIFNMSVGYNLDGIKQPPMQQFIHSLMDAGSNPKFAEYQQVLRELVADEQFIAELGLGARRARLQQLVERIPAELVHGVTLSTMHGCPPNEIEAICRYMLEEKGLNTFVKLNPTLLGYPRVREILDTCGFDYIGLSEASFDHDLKLDQAKAMLTRLMALGAEKGLTFGVKLTNTLGTINRKGALPGGEMYMSGRALFPLSINVAAVLSRAFDGKLPISYSGGASKFNISDIFETGIRPITMATDLLKPGGYLRQIECLNEIDASDSWAMTQVDVEKLEALAAKALTMDYTQKEWKSEDRIEVGGGLPLIDCYVAPCVTACAVHQDIPEYIRLMGEGEYVAALELIYQRNALPAITGHICDHQCQYNCTRLDYDSPLNIRELKKVALELGWEEYKARWHKPAGSGDKHPVAVIGAGPAGLSAGYFLARAGHPVTLFEREADAGGVVKHIIPEFRIPAELIQHDIDFVAAHGVKFEFGCDPALTVDKLHAQGFTYVFVGIGADKNGGMRLEGGHDRVYKSFHFLRSFNQGKPLPLGRHVAVIGAGNTAMDCARAALKVPGVSDVTVIYRRSEKEMPAYREEYLEAVEDGVRFCFLTNPERFDKDGKLVVRMMALGEPDEQGRRRPVPTEQTEVMQMDALITAIGEQPDCEVLKAMGIPLGSDGWPEVDGQTGETSRRNVFLIGDVQSGPSSIVGAIGGARRAADLVLTREHIASQQRDVTTQPSGKDEIYRRKGNIAVTLVDKGERDAFVAQEAHRCLECNYLCSKCVDVCPNRANVAIAVPGFKDQFQTLHLDAYCNECGNCAQFCPWQGKPYQEKVTIFSLPEDFDNSRNPGFYLAGGGELRVRQGGETYRLTIDAQSRIKDAPAALGDMCRIISHVHAHHHYLLGAVEA
>AP019193.1|BBG84950.1|2364131_2365460_+|chlorohydrolase/aminohydrolase
MFILKNVTAVQLEPTRVLEGVDIAIEGTLIKAVGPNLRAPYPQANYREMGGKLVMPGIVCAHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCSAVIDHHASPNFIKGSLNVLRKGFMEAGLRGMTCFETTDRNGGLAELQAGVEENILFAQQIDAAKAKGSEPYLVEAHIGAHAPFTVPDEGLAMLREAVQVTGRGLHIHVAEDRYDMAHGHHHYGKEPIARLDEFGLIDSKTLIAHGIYLSPADIELLNSRDAFLVHNARSNMNNHVGYNLHLPEYRNLALGTDGIGSDMLEELKFAYFKHKDAGGALWPDSFARFLWNGNTLLERNFGAKFGRLEAGYKADLTICDYAAPTPLAPRNLGGHLAFGMGSSSVNSVMVEGRMVYQDREFAFDVEPLYEQASKVASRLWQRMDALA
>AP019193.1|BBG84951.1|2365540_2366317_+|oxidoreductase
MIEQFFRPEQLGQALELKASFGNDAVYMGGGSKLNAAPTRTDKKVAISLDKLGLGQIEQQHGQLHIGATVTLQALKDDPRTPAALCEALGFVYSRHVRNQATIGGEIACQQQDSPLLPVLLVLEAVVVLENNQRQPIDAYLAGQRKELVLGVVLPEPELRCATRRISRNADGLAVMTAAVALDALGEMRVALAGVTPQPMRLRDVERHELHDAALEAAVSALIAPRADLGGSVAYKRYISGVVVADLLVECQQQEVQA
>AP019193.1|BBG84952.1|2366313_2369211_+|selenate-reductase-subunit-YgfN
MMELNFTLNGALRTVITPAGENAQRVLFNQCRMHSVRNSDDGFGFAGSDAILFNGKVINASLLIAAQLDASEVRTAESLGSWNQLSLVQQAMVDVGVVQSGYNDPAAALIVTDLLDRHPEPSRDQIDDALSGLFHRDGGYQQFYQAIELASSRLKDPDYLCQIAPEFRDDLRHIGKSCPKVDAAKMVQAKPCYVEDRVSEDALVIKMLRSPHPHAVITKLDVSRAEAMPGVVHVITHLNCPDVYYTPGGQSAPEPSPLDRRMFGRKLRHVGDRVAAVVAESEAIALAALKLIEVEYQVLPAVMNIDQAMAPNAPLVHDEPIVYMAGAPADLEQQNACSVRRGDEHMIINFPIGSRPHENLAASVHGQIGDVAKGFAEADEIVERTYESTQAQQCPTEPHICFTYMDGERLVIHASTQVPWHVRRQVARIVGMKQHQVHVIKERVGGGFGSKQDILLEEVCAWATKVTGRPVTFRYTREEEFISNTSRHVAKVKVKVGAKKDGTITAIEMDFRANTGPYGNHSLTVPSNGPALSLPLYPCENVRFTVNTYYSNICPTGAYQGYGAPKGNFALTMAIAELAEKLGIDQLEMVEHNRVHEGDILKVLGAIGEGKMPTSVPHAASCALEPILKQGRELIAWDSPKAADGDWRIGRGVAIIMQKSGIPDIDQANCMVKLESDGTFIVHSGGADIGTGLDTVVAKLTAEVLHCPLGDVHVISGDTDHALFDKGAYASSGTCFSGNAAKKAAENLKEKILFHGAAMLGEPVADVELAFPGVVRGKLGEVSLAKLAHKAETGTGFGILVGTASYITSELAFPYGANFAEVAVNVRTGEIRLDKFYALLDCGTPINPELALGQIYGATMRAIGHSLTEEICYDGKGIPLTRDLKSYGAPKIGDIPRDFRAFLVPSDDKVGPYGAKSISEIGVNGAAPAIATAIHDACGVWLRKWHFTPEQILRELGKLEQQASA
>AP019193.1|BBG84953.1|2369306_2370824_+|xanthine-permease
MSKTTRKHSDLIYALEDKPPFYQTLMGAVTHLLAIFVPMVTPALIVGGALGLSTETTAYLVSMAMIASGIGTWLQVNRYGPIGSGLLSIQSVNFSFVTVMIALGSAMKKDGLHEELIVSTLLGVSFVGAFLVMGSSFVLPYLKRVITPTVSGVVVLMIGLSLIKVGIIDFGGGFSAMSSGTFGKYENIGLGLLVLCVIVAFNCSKSPLLRMSGIAIGLLVGYAVALMLGMVDFSALENLPLITVPIPFKYGFSFDLHAFVLAGTIYLLSVLEAVGDITATAMVSHRQIQGPEFQKRLSGGVLADGLVSVIASALGSLPLTTFAQNNGVIQMTGVASRHVGKFIAVILVLLGLFPVVGRFFTTIPSPVMGGAMVIMFSMIAIAGGRIIISHGFDRRETLIVATSLGLGLGVSYDPNVFKVLPAGIYMLVENPICAGGITAIIMNLVLPQSRRRKAAANAAEAVELIQLSDKPDTRFATRPAPSATARQQGLATDEAQVSAPQVDRG
>AP019193.1|BBG84954.1|2370848_2372165_+|guanine-deaminase
MKNDNSVKAVRGSFFDITRVVSQPEEIEPNARLIEDGLLIIRNGCIDWFGQWEEGKERIPAQVRVRDYRGKMIVPGFVDTHIHYPQSEMVGAYGEQLLEWLNRHTFPAERRYNDLEYAREMSTFFIKQLLRNGTTTALVFGTVHPESVDALFEAASRINMRMIAGKVMMDRNAPDYLLDTAESSYEQSKALIERWHGNGRLLYAITPRFAPTSTPAQLAMARRLREEYPTTYLHTHLCENKDEIAWVKSLFPEHQGYLDVYHQHGLTGHNCVFAHCVHLEEQEWDCLKETGSTIAFCPTSNLYLGSGLFKLHKAWHKQVKVGMGTDIGAGTTFNMLQTLNEAYKVMQLQGERLSAYQAFYLATLGGAHALGLDEQIGSFAVGKEADFVVLDPVATPLQQLRYDNSTTLRDKLFVLLTLGDDRSIYRTYVDGQLVHERG
>AP019193.1|BBG84955.1|2372423_2373827_+|permease
MSQTNRINEMDGAVADKGAAAGRQPAGGALDRYFMISERGSNVRQEVLAGLTTFLAMVYSVIVVPSMLGKAGFPPGAVFVATCLVAGFGSLLMGLWAKLPMAIGCAISLTAFTAFSLVLGQQISIPVALGAVFLMGVLFTAISVTGVRSWILDNLPMGIAHGTGIGIGLFLLLIAANGVGLVIKNPLEGLPVALGAFTSMPVIMSLIGLAVIVGLEKLKVPGGILLVIIAISIFGLIFDPAVKYQGLFAMPSLADEQGKSLIFSLDIMGALSPLVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDGHIINSGKALSADSISSIFSGLVGAAPAAVYIESAAGTAAGGKTGLTATVVGVLFLLMLFLSPLSYLVPAYATAPALMYVGLLMLSNVARLDFDDFVGAMSGLLCAVFIVLTCNIVTGIMLGFSALVIGRICSKEWRKLNVGTVIIALALVLFYAGGWAI
>AP019193.1|BBG84956.1|2374158_2376477_+|xanthine-dehydrogenase-molybdenum-binding-subunit-XdhA
MSIGLPLKRVDAEAKVTGSARYTDDNIMLGMRHAKYVRSHIAHGKVLTIDASEALALHGVEAVFTHEDVPTTCFRTAGHAWSLDETKRDVKDRRLLTDHVRHFGDGVAIVVARDPLVAEKAAALVKVTYEPLPVMTDAASALAEGACPIHPTGNLLRQSQIRAGEPEQAIAAADLQFKGHYQTPVVQHCHLETVTCYAYMDQPDHIIVVTSTQIPQIVRSRVAKSLGLPWSSVRVIKPYMGGGFGNKQDVLEEPMAAFLSYQLGGVPVKVTLSREECFFASRTRHGFAIDGTLGISRDGTLKGYQLDVLSNTGGYASHGHSIASAGANKISYLYPRSAFGYDAKTFYSNLPTAGAMRGYGAPQVVFALECMLDDACAELGLDPLAVRIANVAREGDVNQVNQKTIYSAGLPECLRRGGEQFQWERLKAECLAQDPASRVRRGIGVACFSYGSNTYPVGVEIAGARMLLNQDGTVNLQIGATEIGQGSDTVFAQMAAQTLGIPFEQIRVISTQDTDITAYDPGSFASRQSYVAAPAIHQAALQLRARILSLAAQLCHQDVGSLTLIDGYVVLAGAPDKVLISVAEVSVNAYYHLTIGGQITSEVSHKTTTNPPSFGCTFVDLSVDIDLCKVTINRIINLHDAGKILNPQLAEGQVHGGMGMGIGWSLFEEMIIDAKTGVVRNPNLLDYKFPTMLDLPELECDFVQTYEPQSVYGHKSLGEPPIISPGPAIRNAIRMATGVAINELPITPKTLFREFVAAGLIGEGAGEEQRHV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: AP019193_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP019193_9

3983105-3983215

Orphan

Consensus_repeat	Method
ACAAGCGCATCGCCAAGTAACAGGGCAAACAAGTACGGCTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of AP019193_9

>merge|AP019193|9|3983105-3983215|CRISPRCasFinder
ACAAGCGCATCGCCAAGTAACAGGGCAAACAAGTACGGCTTCAACATCAGCCGCACCGTTTCCACCACGACAAGCGCATCGCCAAGTAACAGGGCAAACAAGTGCGGCTTC

>AP019193|9|9|3983105-3983215|CRISPRCasFinder
ACAAGCGCATCGCCAAGTAACAGGGCAAACAAGTACGGCTTC	AACATCAGCCGCACCGTTTCCACCACG
ACAAGCGCATCGCCAAGTAACAGGGCAAACAAGTGCGGCTTC

Protein	Signature genes	Signature genes Name	Protein_function
AP019193.1\|BBG86391.1\|3988073_3990506_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
AP019193.1\|BBG86377.1\|3975138_3975966_-\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|236183
AP019193.1\|BBG86379.1\|3977432_3977621_+\|hypothetical-protein	unknown	unknown	unknown
AP019193.1\|BBG86389.1\|3986223_3986892_-\|mannose-1-phosphate-guanylyltransferase	unknown	unknown	gnl\|CDD\|133044
AP019193.1\|BBG86387.1\|3983953_3985297_+\|adenine-permease	unknown	unknown	gnl\|CDD\|225161
AP019193.1\|BBG86395.1\|3993651_3994014_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
AP019193.1\|BBG86383.1\|3980073_3980583_-\|membrane-protein	unknown	unknown	gnl\|CDD\|378474
AP019193.1\|BBG86378.1\|3976296_3977226_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176140
AP019193.1\|BBG86394.1\|3992819_3993647_+\|ribosomal-RNA-small-subunit-methyltransferase-A	unknown	unknown	gnl\|CDD\|234708
AP019193.1\|BBG86382.1\|3979146_3979983_+\|MTA/SAH-nucleosidase	unknown	unknown	gnl\|CDD\|350170
AP019193.1\|BBG86388.1\|3985373_3986204_-\|co-chaperone-protein-DjlA	unknown	unknown	gnl\|CDD\|236512
AP019193.1\|BBG86380.1\|3977657_3978002_-\|hypothetical-protein	unknown	unknown	unknown
AP019193.1\|BBG86384.1\|3980640_3981216_-\|cyclic-nucleotide-binding-protein	unknown	unknown	gnl\|CDD\|223736
AP019193.1\|BBG86375.1\|3972987_3973791_-\|deoxyribose-phosphate-aldolase	unknown	unknown	gnl\|CDD\|235387
AP019193.1\|BBG86390.1\|3986888_3987899_-\|aminoglycoside-phosphotransferase	unknown	unknown	gnl\|CDD\|225719
AP019193.1\|BBG86381.1\|3978183_3979038_+\|lytic-transglycosylase	unknown	unknown	gnl\|CDD\|381594
AP019193.1\|BBG86386.1\|3983356_3983689_+\|hypothetical-protein	unknown	unknown	unknown
AP019193.1\|BBG86392.1\|3990536_3991835_+\|chaperone-SurA	unknown	unknown	gnl\|CDD\|236758
AP019193.1\|BBG86393.1\|3991834_3992830_+\|4-hydroxythreonine-4-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|234696
AP019193.1\|BBG86376.1\|3973853_3975113_-\|nucleoside-permease	unknown	unknown	gnl\|CDD\|224883

Protein	Function_ID	Function_description	E-value
AP019193.1\|BBG86391.1\|3988073_3990506_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
AP019193.1\|BBG86377.1\|3975138_3975966_-\|purine-nucleoside-phosphorylase	gnl\|CDD\|236183	PRK08202, PRK08202, purine nucleoside phosphorylase; Provisional.	1.53801e-151
AP019193.1\|BBG86389.1\|3986223_3986892_-\|mannose-1-phosphate-guanylyltransferase	gnl\|CDD\|133044	cd06422, NTP_transferase_like_1, NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.	6.03678e-79
AP019193.1\|BBG86395.1\|3993651_3994014_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	2.64795e-64
AP019193.1\|BBG86383.1\|3980073_3980583_-\|membrane-protein	gnl\|CDD\|378474	pfam10688, Imp-YgjV, Bacterial inner membrane protein. This is a family of inner membrane proteins. Many of the members are YgjV protein.	7.75654e-42
AP019193.1\|BBG86387.1\|3983953_3985297_+\|adenine-permease	gnl\|CDD\|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	1.01055e-172
AP019193.1\|BBG86394.1\|3992819_3993647_+\|ribosomal-RNA-small-subunit-methyltransferase-A	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	1.37323e-146
AP019193.1\|BBG86378.1\|3976296_3977226_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176140	cd08449, PBP2_XapR, The C-terminal substrate binding domain of LysR-type transcriptional regulator XapR involved in xanthosine catabolism, contains the type 2 periplasmic binding fold. In Escherichia coli, XapR is a positive regulator for the expression of xapA gene, encoding xanthosine phosphorylase, and xapB gene, encoding a polypeptide similar to the nucleotide transport protein NupG. As an operon, the expression of both xapA and xapB is fully dependent on the presence of both XapR and the inducer xanthosine. Expression of the xapR is constitutive but not auto-regulated, unlike many other LysR family proteins. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.22043e-95
AP019193.1\|BBG86384.1\|3980640_3981216_-\|cyclic-nucleotide-binding-protein	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	8.35176e-17
AP019193.1\|BBG86388.1\|3985373_3986204_-\|co-chaperone-protein-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	5.81204e-143
AP019193.1\|BBG86390.1\|3986888_3987899_-\|aminoglycoside-phosphotransferase	gnl\|CDD\|225719	COG3178, COG3178, Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only].	5.7873e-75
AP019193.1\|BBG86381.1\|3978183_3979038_+\|lytic-transglycosylase	gnl\|CDD\|381594	cd00254, LT-like, lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.	1.61273e-39
AP019193.1\|BBG86392.1\|3990536_3991835_+\|chaperone-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	6.70579e-163
AP019193.1\|BBG86393.1\|3991834_3992830_+\|4-hydroxythreonine-4-phosphate-dehydrogenase	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
AP019193.1\|BBG86376.1\|3973853_3975113_-\|nucleoside-permease	gnl\|CDD\|224883	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism].	7.23139e-157
AP019193.1\|BBG86382.1\|3979146_3979983_+\|MTA/SAH-nucleosidase	gnl\|CDD\|350170	cd17877, NP_MTAN-like, nucleoside phosphorylases similar to 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidases. This subfamily includes both bacterial and plant 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidases (MTANs), as well as futalosine nucleosidase and adenosylhopane nucleosidase. Bacterial MTANs show comparable efficiency in hydrolyzing MTA and SAH, while plant enzymes are highly specific for MTA and are unable to metabolize SAH or show significantly reduced activity towards SAH. MTAN is involved in methionine and S-adenosyl-methionine recycling, polyamine biosynthesis, and bacterial quorum sensing. This subfamily belongs to the nucleoside phosphorylase-I (NP-I) family, whose members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	5.18276e-65
AP019193.1\|BBG86375.1\|3972987_3973791_-\|deoxyribose-phosphate-aldolase	gnl\|CDD\|235387	PRK05283, PRK05283, deoxyribose-phosphate aldolase; Provisional.	1.23878e-129

>AP019193.1|BBG86384.1|3980640_3981216_-|cyclic-nucleotide-binding-protein
MTSLPSAPPLAATLAAMGLAPAIGEPLAGRLPRLTLQPGQPLLAQGAMQESAFYIERGIARACHYNRDGQERCKEFYFEGELCLLYDSWLSGSPARYQLEAVTALQLVRVPLALLDEPAWQPVCMALLRQQLCYKERKEAFLLLHSPEERYRELCRTFPHWPARLTQVQLANYIGISPVTLSRIRRRINTG
>AP019193.1|BBG86383.1|3980073_3980583_-|membrane-protein
MMSLFLWSQLVVSLALLLDLLSFQLRTRRAILACLALSCALNGAHFALLEQASAALLLWLASLRFVVSMLATRRLLMWLFMGLSCLAVLATYQGPLALLGLLASLLQTRAAFCPDDRLLRRWMLLGTLCWLANNLLVGSPVAALMEGLFLVSNLVGYYRHYGRRACPGR
>AP019193.1|BBG86382.1|3979146_3979983_+|MTA/SAH-nucleosidase
MNFIKRCSRLLTLFALFSSAVVAAKPAPAPILIQGAMDVEVETLVAALKDKQELTVGAWTYWQGTLSGYPVVVSRTEVGLANAAAATTLAMERFQPRLVINQGTAGGHDPALHRGDIVIGTKSFNMGAYRSDLTPAEQGVDPSKWHNFEVTMRLRDNGKLVEHTAFAGDPELVGRALGMADRYRHGRVVPGIIGTADEWNRQVARINWLHQTYNTAAEEMETSSAALVAEAYKVPFVGIRVLSNTDLHGEEFDPQTAIHCQQFVIDYAKALINGFNKA
>AP019193.1|BBG86381.1|3978183_3979038_+|lytic-transglycosylase
MSSSSENRLFLLLFLSLLLAGTGLAAAQSRDFRQAPKALSALKKGQQAQSQGNLTQAIHFYCAAATTGNPEGYFRIGRLLATGPGSVRNPRMANAYLAMAIRLGNQQAARYYNSRVGNAVMGDQCGSGVGGSGGYFAAIPTTPFNLEAYLARQSPAKQKLANMLRHAAKRHRIDERLVLAIAIAESNLDSRAVSPKNAQGLMQLIPETQQRFGVTHPFDPEQNIKGGVAYLKWLHTHFDGNWTLMSAAYNAGEKSVEQYGGIPPYQETQQYVRRVLYFAGHKQP
>AP019193.1|BBG86380.1|3977657_3978002_-|hypothetical-protein
MLDKLPLARLGTIGTIGTIGTIGTIGTIGTIGTIGTIDTVSAINTINTISTIHAVGTGAVIAARFREPLAVVRRWAVITGRAGRAGLQWGAVQAAKQQQQSAEGTSRFHGIDQA
>AP019193.1|BBG86379.1|3977432_3977621_+|hypothetical-protein
MIRILLLLGAALAAYGLQQSHTLAPLLSLLGLLSLWVASEIRLMYRQLPATEPDEQPYHLDV
>AP019193.1|BBG86378.1|3976296_3977226_+|LysR-family-transcriptional-regulator
MALDSHWRDRVTLKMLRYFHAVASQGHFSRAALQLNVSKSPLSAQIKELESLLGLALFERHTRQVSLTATGRLLQAECALLFDVLESGLNRVVQAGRMERNQIRIGLVSSIFWAGFGEVIRQCHPEFEITFTELSPERQKQALARKEIDLGLARFADTVNIHPLLAETIYRESMVLVVSDEHPLRDRKLVSLPELAGEPFVLMSRANSSSTDLIINACLVEGFYPHLNQEVVEPNTLMAVVATSLQVALVPASYARQKWPHVRFIRLEQAIPADLCVLYAPPGDGQPAAVAIRHFIDTMSAQMNRPTAD
>AP019193.1|BBG86377.1|3975138_3975966_-|purine-nucleoside-phosphorylase
MQQDPVLNAVATILARKPGFAPRAAMILGSGLGVLADGLEEKVTIPYEELDGFPVSTVAGHSGELVLGKLHGVDVVCMKGRGHYYEHETMKVMTTPVRTFKRLGCELLLVTNAAGSLRPERIGVGSLVIFNDHINTMPGTPMTGANDEAYGPRFFSLANAYDKGLRSEALALAEREGIAVNQGVFVSYSGPCFETAAEIRMMQIIGGDVVGMSVVPEVVSAAHCGLPVLAICAITNMAEGLGDVQLSHEQTLKCAKLAETDFIRLINAFIKHHFQ
>AP019193.1|BBG86376.1|3973853_3975113_-|nucleoside-permease
MFAAGFLGMAALILIAVLASTNRRAIRLRTVGLALALQVAIGALVLYVPLGRRALEGMAHGVDAVLASGKAGIHFLFGNLVNFSVDGIGFVFALNVLPLVVFFSALIAVLYYLGIMQLVIRFIGGAMARLLGTSQTESMSAVANVFVGQSEAPLVVKPYMPKMSDSEFFAVMCGGMASVSGTVLAGYAMMGVDMQYLLAASFMAAPGGILFAKLIIPETSQPDYVFDNSIQFDGKKPENVLAAAGEGASSGLKLAAAIGAMLIAMIGLVTLVNTLLGGVGEMVGMPLSLELILGWIFSPLAFLLGVPLADIGIAGAMIGKKLVVNEFVAYSDLSPYLKDASTVTAAGLQVLEEKSKVIISFALCGFANLASMGILIGGLGTLCPSRTDFIARYGLRTVLAATCSNLMSAAIAGIFFSLA
>AP019193.1|BBG86375.1|3972987_3973791_-|deoxyribose-phosphate-aldolase
MTPATAFAPACAATEAASRAIRLMDLTSLNDDDHDARIIALCHQAQTPVGNTAAVCIYPRFVGLARLTLVAQGTPEIKVATVVNFPHGDDELASVLAETRAALLAGADEIDLVIPWRALKAGDEAPARALVRGCKALCGTRLLKVIIESGELQEPALIRAASLLAIEEGADFIKTSTGKVPVNVTPEACRTMLAAIAECGAQHRVGFKAAGGVKGAQEAGEYLAMAAALFGDEWLVAERFRFGASSLLGQLLATIEGKKPVAADGSY
>AP019193.1|BBG86386.1|3983356_3983689_+|hypothetical-protein
MTTQPTEKKLTIQIRVEPGCLGPDGKAHIETFCTAAAKIFAAVEPELVNWTLLPRYDKQLPEQEFFIDGRKLTEEQASLFLRRLGRELGEVQETLDSVLAQLVERYFKTL
>AP019193.1|BBG86387.1|3983953_3985297_+|adenine-permease
MNQPHQAPAQAAGQGLLERLFALKGHGTNARTEVIAGITTFLTMVYIVFVNPQILSAAGMDTQAVFVTTCLIAGIGSILMGLLANLPIALAPAMGLNAFFAFVVVAGMGYSWQVGMGTIFWGAMGLLILTLLRVRYWLIANIPLTLRVGITAGIGLLIALLGLHNAGIVVASPATMVTVGNLTSLPCLLGLLGFFLICIFSARGVHSAVLIAIVVTTTLGWLFGDVTFKGFVSMPPSIEPVFGQLDLMGSLDISLAGIIFSFMLVNLFDSSGTLIGVTNRAKLADDKGHFPRMKQALLVDSASSVGGAFMGTSSVTAFIESSSGVAVGGRTGLTAIVVGLLFLLAIFFSPVAAMVPAYAAAGALIYVGVLMCSELTRVKWEDLTEAVPAFMTAVMMPFSFSITEGIAVGFISYCVMKAGTGRWREINPCVLVVALLFVLKFVWVDSH
>AP019193.1|BBG86388.1|3985373_3986204_-|co-chaperone-protein-DjlA
MRIWGKVLGAFFGFLLGNIFGALLGLWIGHRFDRGMGLNFRRAPTQQQQAVFFHATFAVMGHIAKASGQVTEQEIRVASNLMDRMRLAGEQRARAQESFRQGKEADFPLRETLAEFRRASQGQRDILRFFLEVQLQAAFADGKVEANERAILHTIADELGFSRIELARILAMAEAQMNFFNRAHGGQYQDGGHGGQQYRQEAPSRDRLKDAYQLLGVSESDSDQEIKRAYRKEMSKHHPDKLAAKGLPPEMMEMAKEKTQEIQQAWEWIREARGIR
>AP019193.1|BBG86389.1|3986223_3986892_-|mannose-1-phosphate-guanylyltransferase
MKAMILAAGRGERMRPLTDSLPKPLLAVGGKPLIVHHIEKLKDAGVTDLVINHAWLGHKLMEALGDGSTLGVSIHWSAEESALETAGGIIQALPLLGDEPFLVINGDTWLDLDYRTLVSQPLGTDLAHLWLVPNPPQHPAGDFALQGGKVVDSPALTFSGVGLYDPAAFAGLMPGARKLAPLLREWMAQGRVGGSLLAGEWHDIGTVVRLQALDDQLQGRTH
>AP019193.1|BBG86390.1|3986888_3987899_-|aminoglycoside-phosphotransferase
MHDRDSLLLHWARRISGDASLQLTLISGDASFRRYHRGGGLIWVDANPKTEKNHEFVRNASALNAGGLLAPEVRAVDYEQGLLAVTDLGDTQLIGCLNADNVLAWYGKAIALLPRLGAVELDLEPFDSAFMVRENSIFPEWLLGHHLQLTLSDEEQQLLAETFACLTENNLAQPQGVMHRDFHSRNLMVCGGETPADSRLAVIDFQDMVIGPLSYDLVSLLKDCYVRWPDAVIEQGMRLGFDTLQQAKLLGELDYAAFRRAADLTGMQRHLKAAGIFTRLYHRDGKSGYLKDIPRTLGYVVDVCHSHGASYPVLARFGQWLAQVVLPGLARSGVAS
>AP019193.1|BBG86391.1|3988073_3990506_+|LPS-assembly-protein-LptD
MTKRTLGYSYPIALTISLVPALTPAIVQAAPLTPPPATGILDGLCYDYVPKIEKLAPGKDANAQPVEVDADRLEAKQGGTAVYQGDVKVRQGVRKFDSDYAELDQKSRDVIAIGNIYYNDGQITVTSDKTLKSNLDTKNSELEEGKYQVHGSPVRGSADRVTMTNNNQNITLEGAQYTTCPPGQEVWTLKAGSIDIDQTEVFGEAWNASLWLYDYPVFYFPYINFPIKDERKTGLLYPGYTQSSKNGMDITQPFYWNIAPNYDATITSRFMDRRGLMEQVQFRYMPDPAHVGSLYFENLANDKQYDETPSLNQAMSDGHRYLLNANHTSLFADNAMRVSLDYTKVRDRDYNYFNDFSPKVGTQVENQLQQSLMAGYFQPNWNINTEVRTYQILLASAQQPHELMPRIDHNYYQQGSWYDLAWNTEITKFGYNNAQAIAQNQGGAYTGTRVYTAPTLTMPLINEAGYYLDSQYKLMYTRYDQEVPDNMSQTFVSRFTPENGNGVTLDEGIITRTLPSFRLKGGMTFERNQNWFGGDANQTLEPEFQYLYVPYKNQDNIGVYDSTSMRQDYYSLFSDRRYAGLDRISDSNRVSIGLTSRVYDEAGDERIRLAVAQAFDFVAPRVKLYPSETLNTNTRSPLSFEGDAKINEQWFAHAGAQYDVDQSRLSSANSAIEYRREKLISQLNHRFVRDANYDLENKGQVTDLNQIGLLLTTPLNDQWHLYGGYYQELNQSVKSDRKVGLKYDSCCWSINFNLEWVNTPDNVTMRPTSERSLGIQFEMKGLGSVGTGSKGTSLDTEALPYIRPFNLRDQ
>AP019193.1|BBG86392.1|3990536_3991835_+|chaperone-SurA
MKKTLISLLTAGLFGAMSQGAFAAPELMDKVLAVVNKDVVLASQQEALVQKVKASAQESGQSLPDDATLRKQALDRLIQESLQLQLADRQGLKISDTQLEQAIQSIAADNKMTLDQLRAQLAREGLTYAQYREEVRREILMNEVRRNQVRRRINISEQEVKQVVDILAKQGQQQQQYHVGHIQVALPDNPSAEQLNAAKSKIERILAALKQGADFRKMAIAESSGPKALEGGDWGWMSPQEMPTLMAEAVQGTKKGDIVGPLRSGAGLHIIKVFDSKGQQQVVQTEVRARHILIKPSIILSEEKAKGMLDGILHDIKSGKASFASLAEKYSEDPGSAVQGGELGWSDPNVYVPEFRDMVNRLQPGQISEPFRTTHGWHIVQLEERRSQDATNKAQEQRAYQLIYNRRFTEESQAWLDELRDEAYIQIEGAGS
>AP019193.1|BBG86393.1|3991834_3992830_+|4-hydroxythreonine-4-phosphate-dehydrogenase
MSCRRLAITPGEPAGIGPDLVLQIAQQEWPHQLVVIADPALLRERAALLGLPVELQPYDADQPARPQRAGTLTVCPVPLGAAVVPGMLDESNGAYVLATLQRACDGNMSGEFAAVVTGPVHKGIINQAGVSFSGHTEFFAQQSGTADVVMLLATEGLRVALATTHIPLAYVAMAITEDRLGKVIRILDADLKSKFGIAKPRIYVCGLNPHAGEGGHLGREEIDVIEPALAGLRQEGIDLVGPLPADTLFQDKYLKDADAVLAMYHDQGLPVLKYKGFGSSVNITLGLPFIRTSVDHGTALDLAGKGLADSGSLITAINHAIKMVEKKRYEQ
>AP019193.1|BBG86394.1|3992819_3993647_+|ribosomal-RNA-small-subunit-methyltransferase-A
MSSKVQSNKVHMGHTARKRFGQNFLHDRYVIDQIVAAINPQPGQNLVEIGPGLAALTEPVASQMDKMTVVELDRDLAARLREHPTLKEKLTVIEADAMRFDFGTLMGEGKGPLRIFGNLPYNISTPLIFHLCEFADRMEDMHFMLQKEVVLRLAAGPGSKAYGRLSVMTQYYCQVVPVLEVGPGAFKPAPKVDSAVVRLIPHKNPTIVAKDIRCLNRVCTEGFGQRRKTIRNSFSNFITDAQLTELGIDGNLRPENLSLEQFVMIANWLADQQQA
>AP019193.1|BBG86395.1|3993651_3994014_+|Co2+/Mg2+-efflux-protein-ApaG
MATPHIVIRPYPRYVADSKDPYQFHYLIEIENLGPGPAQLLHRRWLITDANGKMLEVEGPGVVGEQPVIAEGETFRYQSGVPLATPLGVMEGSYTLQDESGQQFEAPIAPFTLAVPHIIN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
AP019193_9	9.1\|3983147\|27\|AP019193\|CRISPRCasFinder	3983147-3983173	27	NZ_AP014810	Methylorubrum populi strain P-1M plasmid pMPPM01, complete sequence	36214-36240	4	0.852
AP019193_9	9.1\|3983147\|27\|AP019193\|CRISPRCasFinder	3983147-3983173	27	NZ_CP049702	Bradyrhizobium sp. 1S5 strain 323S2 plasmid pB323S2c, complete sequence	151818-151844	5	0.815
AP019193_9	9.1\|3983147\|27\|AP019193\|CRISPRCasFinder	3983147-3983173	27	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	106482-106508	5	0.815
AP019193_9	9.1\|3983147\|27\|AP019193\|CRISPRCasFinder	3983147-3983173	27	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	283430-283456	5	0.815
AP019193_9	9.1\|3983147\|27\|AP019193\|CRISPRCasFinder	3983147-3983173	27	NZ_CP007797	Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence	435314-435340	5	0.815
AP019193_9	9.1\|3983147\|27\|AP019193\|CRISPRCasFinder	3983147-3983173	27	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	622105-622131	5	0.815
AP019193_9	9.1\|3983147\|27\|AP019193\|CRISPRCasFinder	3983147-3983173	27	MT162466	Synechococcus phage S-N03, complete genome	164743-164769	5	0.815
AP019193_9	9.1\|3983147\|27\|AP019193\|CRISPRCasFinder	3983147-3983173	27	NZ_CP035513	Haematobacter massiliensis strain OT1 plasmid pOT1-3, complete sequence	144138-144164	6	0.778

1. spacer 9.1|3983147|27|AP019193|CRISPRCasFinder matches to NZ_AP014810 (Methylorubrum populi strain P-1M plasmid pMPPM01, complete sequence) position: , mismatch: 4, identity: 0.852

aacatcagccgcaccgtttccaccacg	CRISPR spacer
caactcagccgcaccgtttccaccccg	Protospacer
 *  ******************** **

2. spacer 9.1|3983147|27|AP019193|CRISPRCasFinder matches to NZ_CP049702 (Bradyrhizobium sp. 1S5 strain 323S2 plasmid pB323S2c, complete sequence) position: , mismatch: 5, identity: 0.815

aacatcagccgcaccgtttccaccacg	CRISPR spacer
ttcatcagccgcaccgtttccagggcg	Protospacer
  ********************  .**

3. spacer 9.1|3983147|27|AP019193|CRISPRCasFinder matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 5, identity: 0.815

aacatcagccgcaccgtttccaccacg	CRISPR spacer
tgcatcagccgcaccgcctccaccatg	Protospacer
 .**************..*******.*

4. spacer 9.1|3983147|27|AP019193|CRISPRCasFinder matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 5, identity: 0.815

aacatcagccgcaccgtttccaccacg	CRISPR spacer
tgcatcagccgcaccgcctccaccatg	Protospacer
 .**************..*******.*

5. spacer 9.1|3983147|27|AP019193|CRISPRCasFinder matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 5, identity: 0.815

aacatcagccgcaccgtttccaccacg	CRISPR spacer
tgcatcagccgcaccgcctccaccatg	Protospacer
 .**************..*******.*

6. spacer 9.1|3983147|27|AP019193|CRISPRCasFinder matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 5, identity: 0.815

aacatcagccgcaccgtttccaccacg	CRISPR spacer
tgcatcagccgcaccgcctccaccatg	Protospacer
 .**************..*******.*

7. spacer 9.1|3983147|27|AP019193|CRISPRCasFinder matches to MT162466 (Synechococcus phage S-N03, complete genome) position: , mismatch: 5, identity: 0.815

aacatcagccgcaccgtttccaccacg	CRISPR spacer
aacagcagcagcaccgtttccactttg	Protospacer
**** **** *************. .*

8. spacer 9.1|3983147|27|AP019193|CRISPRCasFinder matches to NZ_CP035513 (Haematobacter massiliensis strain OT1 plasmid pOT1-3, complete sequence) position: , mismatch: 6, identity: 0.778

aacatcagccgcaccgtttccaccacg	CRISPR spacer
tccatcagccgcaccgtttccgcccgc	Protospacer
  *******************.**

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1963223 : 1978091

Vibrio_phage(30.77%)

head

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBG84604.1\|1963223_1963844_+	sulfate transporter	A0A2I7S9B0	Vibrio_phage	8.7e-61	58.9
BBG84605.1\|1963858_1964056_+	hypothetical protein	NA	NA	NA	NA
BBG84606.1\|1964168_1964399_+	hypothetical protein	NA	NA	NA	NA
BBG84607.1\|1964385_1964568_+	hypothetical protein	NA	NA	NA	NA
BBG84608.1\|1964548_1965133_+	GemA protein	A0A2I7S9B8	Vibrio_phage	4.7e-24	36.0
BBG84609.1\|1965125_1965548_+	hypothetical protein	NA	NA	NA	NA
BBG84610.1\|1965638_1966229_+	hypothetical protein	NA	NA	NA	NA
BBG84611.1\|1966775_1967363_+	hypothetical protein	A0A0G3EVH8	Achromobacter_phage	3.4e-14	33.9
BBG84612.1\|1967359_1967671_+	hypothetical protein	NA	NA	NA	NA
BBG84613.1\|1967663_1967885_+	hypothetical protein	NA	NA	NA	NA
BBG84614.1\|1967906_1968134_+	hypothetical protein	NA	NA	NA	NA
BBG84615.1\|1968114_1968417_+	hypothetical protein	M1Q558	Vibrio_phage	5.2e-11	40.2
BBG84616.1\|1968413_1968710_+	hypothetical protein	A0A0C4UR00	Shigella_phage	9.6e-18	58.1
BBG84617.1\|1968712_1968958_+	hypothetical protein	NA	NA	NA	NA
BBG84618.1\|1968954_1969530_+	hypothetical protein	A0A0C4UQU5	Shigella_phage	5.2e-60	68.4
BBG84619.1\|1969529_1971074_+	hypothetical protein	M4MHG0	Vibrio_phage	4.0e-163	60.3
BBG84620.1\|1971073_1972645_+	Mu-like prophage FluMu protein gp29	J9SVY0	Pseudomonas_phage	1.4e-120	47.7
BBG84621.1\|1972644_1974120_+	hypothetical protein	A0A2H4IYU7	uncultured_Caudovirales_phage	3.6e-65	53.6
BBG84622.1\|1974116_1974323_+	hypothetical protein	NA	NA	NA	NA
BBG84623.1\|1974322_1974769_+	hypothetical protein	Q5ZQY1	Pseudomonas_phage	5.2e-15	34.8
BBG84624.1\|1974991_1976122_+	Mu-like prophage FluMu I protein	A0A0C4UQU6	Shigella_phage	2.5e-66	45.2
BBG84625.1\|1976180_1977089_+\|head	head protein	A0A0C4UQR9	Shigella_phage	7.9e-103	58.2
BBG84626.1\|1977193_1977676_+	hypothetical protein	NA	NA	NA	NA
BBG84627.1\|1977677_1978091_+	hypothetical protein	B7SDP4	Haemophilus_phage	1.8e-14	37.7

DBSCAN-SWA_2

2862453 : 2875378

Klebsiella_phage(25.0%)

terminase,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBG85360.1\|2862453_2862765_-	hypothetical protein	A0A2H4J8C5	uncultured_Caudovirales_phage	1.8e-11	40.4
BBG85361.1\|2862767_2862941_-	hypothetical protein	NA	NA	NA	NA
BBG85362.1\|2863007_2864294_-	hypothetical protein	Q6UAX6	Klebsiella_phage	5.1e-140	61.4
BBG85363.1\|2864362_2865298_-	hypothetical protein	Q6UAX7	Klebsiella_phage	5.6e-80	50.8
BBG85364.1\|2865285_2866539_-\|portal	portal protein	Q6UAX8	Klebsiella_phage	2.8e-159	65.6
BBG85365.1\|2866538_2866727_-	hypothetical protein	NA	NA	NA	NA
BBG85366.1\|2866720_2868442_-\|terminase	terminase	U5P0Q5	Shigella_phage	8.6e-260	74.0
BBG85367.1\|2868451_2868937_-\|terminase	terminase	A0A2D1GNP3	Pseudomonas_phage	3.9e-48	59.6
BBG85368.1\|2869032_2869413_-	HNH endonuclease	A0A1V0E8A5	Vibrio_phage	7.5e-31	54.7
BBG85369.1\|2869499_2870018_-	hypothetical protein	A0A059VF51	Pseudomonas_phage	2.2e-17	37.9
BBG85370.1\|2870014_2870533_-	hypothetical protein	V5YSX1	Pseudomonas_phage	9.1e-72	78.4
BBG85371.1\|2870519_2870858_-	hypothetical protein	A5X9I3	Aeromonas_virus	7.8e-24	54.5
BBG85372.1\|2871085_2872153_-	methyltransferase	A0A1I9KF79	Aeromonas_phage	2.6e-129	73.7
BBG85373.1\|2872760_2873375_-	TetR family transcriptional regulator	NA	NA	NA	NA
BBG85374.1\|2873455_2874649_+	tetracycline resistance protein	NA	NA	NA	NA
BBG85375.1\|2874739_2875378_-	hypothetical protein	C7BGE4	Burkholderia_phage	2.6e-44	41.7

DBSCAN-SWA_3

2880550 : 2889650

Salmonella_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBG85383.1\|2880550_2880904_-	hypothetical protein	T1SA23	Salmonella_phage	4.8e-24	56.9
BBG85384.1\|2880900_2881890_-	hypothetical protein	A0A1V0E819	Vibrio_phage	1.1e-33	31.2
BBG85385.1\|2881886_2882150_-	hypothetical protein	NA	NA	NA	NA
BBG85386.1\|2882133_2882352_-	hypothetical protein	NA	NA	NA	NA
BBG85387.1\|2882406_2883216_-	hypothetical protein	A0A1W6JP13	Morganella_phage	1.6e-30	39.0
BBG85388.1\|2883319_2883709_-	hypothetical protein	A0A1V0E824	Vibrio_phage	3.9e-19	51.2
BBG85389.1\|2883698_2884004_-	hypothetical protein	NA	NA	NA	NA
BBG85390.1\|2883996_2884203_-	hypothetical protein	NA	NA	NA	NA
BBG85391.1\|2884199_2884430_-	hypothetical protein	NA	NA	NA	NA
BBG85392.1\|2884426_2884687_-	hypothetical protein	A0A1I9KFB1	Aeromonas_phage	1.5e-14	53.0
BBG85393.1\|2884686_2885172_-	hypothetical protein	NA	NA	NA	NA
BBG85394.1\|2885149_2886268_-	hypothetical protein	A5VW95	Enterobacteria_phage	2.1e-17	36.0
BBG85395.1\|2886260_2886404_-	hypothetical protein	NA	NA	NA	NA
BBG85396.1\|2886396_2887056_-	hypothetical protein	A0A1C9IHV9	Salmonella_phage	9.9e-47	59.8
BBG85397.1\|2887111_2887225_+	hypothetical protein	NA	NA	NA	NA
BBG85398.1\|2887817_2888075_+	hypothetical protein	NA	NA	NA	NA
BBG85399.1\|2888093_2888612_-	hypothetical protein	NA	NA	NA	NA
BBG85400.1\|2888631_2888850_-	hypothetical protein	NA	NA	NA	NA
BBG85401.1\|2888957_2889650_+	peptidase S24	B1B6L9	Salmonella_phage	1.3e-25	39.1

DBSCAN-SWA_4

4115042 : 4124999

uncultured_Mediterranean_phage(25.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBG86497.1\|4115042_4116899_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.1e-34	32.6
BBG86498.1\|4117121_4118909_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	5.2e-74	41.1
BBG86499.1\|4118997_4119441_-\|tRNA	aspartyl-tRNA amidotransferase subunit B	A0A292GL36	Xanthomonas_phage	2.9e-26	48.6
BBG86500.1\|4119456_4119672_-	30S ribosomal protein S21	NA	NA	NA	NA
BBG86501.1\|4119851_4120865_+\|tRNA	tRNA N6-adenosine threonylcarbamoyltransferase	A0A0R6PI74	Moraxella_phage	9.1e-108	58.3
BBG86502.1\|4120949_4121933_-	RNA polymerase sigma factor RpoS	F4YCU2	Synechococcus_phage	1.7e-34	34.1
BBG86503.1\|4121980_4123021_-	peptidoglycan-binding protein	A0A0A7NU10	Lactobacillus_phage	8.6e-13	35.6
BBG86504.1\|4123031_4123613_-	hypothetical protein	NA	NA	NA	NA
BBG86505.1\|4123609_4124227_-	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	4.0e-34	46.4
BBG86506.1\|4124231_4124999_-	5'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	7.4e-70	54.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. AP019194

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

20027 : 26374

Enterobacteria_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBG87311.1\|20027_20453_+	antirestriction protein KlcA	A0A2D0W8Z5	Bordetella_virus	5.3e-17	37.3
BBG87312.1\|20580_20736_+	hypothetical protein	NA	NA	NA	NA
BBG87313.1\|20781_21078_+	protein KorC	NA	NA	NA	NA
BBG87314.1\|21082_22063_+	hypothetical protein	NA	NA	NA	NA
BBG87315.1\|22312_23194_-	beta-lactamase KPC-2	A0A1B0VBP7	Salmonella_phage	2.2e-73	52.2
BBG87316.1\|23415_24066_-	truncated beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	3.6e-102	86.5
BBG87317.1\|24140_25121_-\|transposase	ISKpn27 transposase	A8RHK4	Spiroplasma_virus	2.9e-10	27.4
BBG87318.1\|25243_25801_-	Tn3 resolvase	Q1MVP4	Enterobacteria_phage	2.0e-93	98.4
BBG87319.1\|25963_26374_+\|transposase	Tn2 transposase	Q1MVP5	Enterobacteria_phage	6.7e-70	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. AP019193

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. AP019194

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection