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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP036254 Xanthomonas oryzae strain BB156-2 chromosome, complete genome 4 crisprs cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DinG,csa3,DEDDh,WYL,RT 1 13 14 15

Results visualization

1. CP036254
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP036254_1 292880-293021 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP036254_2 344378-347121 TypeI I-C
41 spacers
cas2,cas1,cas4,cas7,cas8c,cas5,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP036254_3 1836542-1836640 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP036254_4 2827197-2827276 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 103697-103728 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 286281-286312 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 291440-291471 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 313365-313396 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 503524-503555 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 505045-505076 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 508925-508956 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 554854-554885 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 825771-825802 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 988902-988933 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 1664188-1664219 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 1720726-1720757 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 1849980-1850011 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 2451416-2451447 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 2465673-2465704 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 2466540-2466571 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 2672154-2672185 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 3000849-3000880 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 3003408-3003439 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 3004928-3004959 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 3041526-3041557 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 3403262-3403293 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 3567782-3567813 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 3703864-3703895 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 4267132-4267163 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 4425430-4425461 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 4479320-4479351 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 4731694-4731725 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 4737778-4737809 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 4880830-4880861 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 4887827-4887858 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 4958177-4958208 0 1.0
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 710298-710329 1 0.969
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 828130-828161 1 0.969
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 1834406-1834437 1 0.969
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 1836508-1836539 1 0.969
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 4674158-4674189 1 0.969
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 4722663-4722694 1 0.969
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 4879005-4879036 1 0.969
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 4910041-4910072 1 0.969
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 CP036254.1 4995378-4995409 1 0.969

1. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 103697-103728, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

2. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 286281-286312, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

3. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 291440-291471, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

4. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 313365-313396, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

5. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 503524-503555, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

6. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 505045-505076, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

7. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 508925-508956, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

8. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 554854-554885, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

9. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 825771-825802, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

10. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 988902-988933, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

11. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 1664188-1664219, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

12. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 1720726-1720757, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

13. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 1849980-1850011, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

14. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 2451416-2451447, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

15. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 2465673-2465704, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

16. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 2466540-2466571, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

17. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 2672154-2672185, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

18. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 3000849-3000880, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

19. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 3003408-3003439, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

20. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 3004928-3004959, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

21. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 3041526-3041557, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

22. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 3403262-3403293, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

23. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 3567782-3567813, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

24. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 3703864-3703895, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

25. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 4267132-4267163, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

26. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 4425430-4425461, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

27. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 4479320-4479351, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

28. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 4731694-4731725, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

29. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 4737778-4737809, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

30. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 4880830-4880861, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

31. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 4887827-4887858, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

32. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 4958177-4958208, mismatch: 0, identity: 1.0

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaacatggcactggaggtttga	Protospacer
********************************

33. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 710298-710329, mismatch: 1, identity: 0.969

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaatatggcactggaggtttga	Protospacer
*************.******************

34. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 828130-828161, mismatch: 1, identity: 0.969

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaatatggcactggaggtttga	Protospacer
*************.******************

35. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 1834406-1834437, mismatch: 1, identity: 0.969

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaatatggcactggaggtttga	Protospacer
*************.******************

36. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 1836508-1836539, mismatch: 1, identity: 0.969

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaatatggcactggaggtttga	Protospacer
*************.******************

37. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 4674158-4674189, mismatch: 1, identity: 0.969

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaatatggcactggaggtttga	Protospacer
*************.******************

38. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 4722663-4722694, mismatch: 1, identity: 0.969

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaatatggcactggaggtttga	Protospacer
*************.******************

39. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 4879005-4879036, mismatch: 1, identity: 0.969

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaatatggcactggaggtttga	Protospacer
*************.******************

40. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 4910041-4910072, mismatch: 1, identity: 0.969

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggcccgcaaatatggcactggaggtttga	Protospacer
*************.******************

41. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to position: 4995378-4995409, mismatch: 1, identity: 0.969

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggtccgcaaacatggcactggaggtttga	Protospacer
*****.**************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP036254_2 2.2|344474|36|CP036254|PILER-CR,CRISPRCasFinder,CRT 344474-344509 36 NZ_CP018474 Xanthomonas perforans strain LH3 plasmid pLH3.3, complete sequence 36906-36941 0 1.0
CP036254_2 2.2|344474|36|CP036254|PILER-CR,CRISPRCasFinder,CRT 344474-344509 36 NZ_CP018734 Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.3, complete sequence 39276-39311 0 1.0
CP036254_2 2.2|344474|36|CP036254|PILER-CR,CRISPRCasFinder,CRT 344474-344509 36 NZ_CP018730 Xanthomonas gardneri strain JS749-3 plasmid pJS749-3.2, complete sequence 43293-43328 0 1.0
CP036254_2 2.2|344474|36|CP036254|PILER-CR,CRISPRCasFinder,CRT 344474-344509 36 AP019683 Xanthomonas campestris pv. campestris MAFF106712 pXcc1 plasmid DNA, complete genome 35182-35217 0 1.0
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP018476 Xanthomonas perforans strain LH3 plasmid pLH3.2, complete sequence 9693-9727 1 0.971
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP018476 Xanthomonas perforans strain LH3 plasmid pLH3.2, complete sequence 41293-41327 1 0.971
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP041964 Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1 20750-20784 1 0.971
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP041964 Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1 35931-35965 1 0.971
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP019227 Xanthomonas oryzae pv. oryzae strain IX-280 plasmid pXOO43, complete sequence 26467-26501 1 0.971
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP018853 Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.3, complete sequence 19791-19825 1 0.971
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP018853 Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.3, complete sequence 37808-37842 1 0.971
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP022265 Xanthomonas citri pv. vignicola strain CFBP7111 plasmid plC, complete sequence 20943-20977 1 0.971
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP022265 Xanthomonas citri pv. vignicola strain CFBP7111 plasmid plC, complete sequence 41829-41863 1 0.971
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP022266 Xanthomonas citri pv. vignicola strain CFBP7111 plasmid plB, complete sequence 21647-21681 1 0.971
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP018857 Xanthomonas citri pv. citri strain LH276 plasmid pLH276.3, complete sequence 30782-30816 1 0.971
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP018857 Xanthomonas citri pv. citri strain LH276 plasmid pLH276.3, complete sequence 50615-50649 1 0.971
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP024080 Xanthomonas citri pv. citri strain Xcc29-1 plasmid pXAC47, complete sequence 33704-33738 1 0.971
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP023161 Xanthomonas citri pv. malvacearum strain MS14003 plasmid unnamed2, complete sequence 44222-44256 1 0.971
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP017023 Xanthomonas citri pv. malvacearum strain MSCT plasmid pMSCT60kb, complete sequence 57800-57834 1 0.971
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NC_020798 Xanthomonas axonopodis Xac29-1 plasmid pXAC47, complete sequence 2353-2387 1 0.971
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NC_020798 Xanthomonas axonopodis Xac29-1 plasmid pXAC47, complete sequence 33706-33740 1 0.971
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 NZ_CP018464 Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence 128074-128105 1 0.969
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 NZ_CP018464 Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence 171349-171380 1 0.969
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 NZ_CP020887 Xanthomonas citri pv. citri strain TX160149 plasmid unnamed2, complete sequence 17731-17762 1 0.969
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 NZ_CP020887 Xanthomonas citri pv. citri strain TX160149 plasmid unnamed2, complete sequence 28278-28309 1 0.969
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 NZ_CP020888 Xanthomonas citri pv. citri strain TX160149 plasmid unnamed3, complete sequence 9937-9968 1 0.969
CP036254_4 4.1|2827221|32|CP036254|CRISPRCasFinder 2827221-2827252 32 NZ_CP013005 Xanthomonas citri pv. malvacearum strain XcmH1005 plasmid pXcmH, complete sequence 1961-1992 1 0.969
CP036254_1 1.1|292929|44|CP036254|CRISPRCasFinder 292929-292972 44 NZ_CP018464 Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence 129470-129513 2 0.955
CP036254_1 1.1|292929|44|CP036254|CRISPRCasFinder 292929-292972 44 NZ_CP018464 Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence 169941-169984 2 0.955
CP036254_1 1.1|292929|44|CP036254|CRISPRCasFinder 292929-292972 44 NZ_CP022264 Xanthomonas citri pv. vignicola strain CFBP7111 plasmid plA, complete sequence 42756-42799 2 0.955
CP036254_1 1.1|292929|44|CP036254|CRISPRCasFinder 292929-292972 44 NZ_CP020887 Xanthomonas citri pv. citri strain TX160149 plasmid unnamed2, complete sequence 16323-16366 2 0.955
CP036254_1 1.1|292929|44|CP036254|CRISPRCasFinder 292929-292972 44 NZ_CP020887 Xanthomonas citri pv. citri strain TX160149 plasmid unnamed2, complete sequence 29674-29717 2 0.955
CP036254_1 1.1|292929|44|CP036254|CRISPRCasFinder 292929-292972 44 NZ_CP020888 Xanthomonas citri pv. citri strain TX160149 plasmid unnamed3, complete sequence 9276-9319 2 0.955
CP036254_1 1.1|292929|44|CP036254|CRISPRCasFinder 292929-292972 44 NZ_CP020888 Xanthomonas citri pv. citri strain TX160149 plasmid unnamed3, complete sequence 11333-11376 2 0.955
CP036254_1 1.1|292929|44|CP036254|CRISPRCasFinder 292929-292972 44 NZ_CP013005 Xanthomonas citri pv. malvacearum strain XcmH1005 plasmid pXcmH, complete sequence 3357-3400 2 0.955
CP036254_2 2.2|344474|36|CP036254|PILER-CR,CRISPRCasFinder,CRT 344474-344509 36 NZ_CP020965 Xanthomonas phaseoli pv. phaseoli strain CFBP412 plasmid pA, complete sequence 18271-18306 2 0.944
CP036254_2 2.2|344474|36|CP036254|PILER-CR,CRISPRCasFinder,CRT 344474-344509 36 CP030168 Xanthomonas citri pv. punicae strain LMG7504 plasmid unnamed2, complete sequence 41452-41487 2 0.944
CP036254_2 2.2|344474|36|CP036254|PILER-CR,CRISPRCasFinder,CRT 344474-344509 36 NZ_CP020976 Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pA 28338-28373 2 0.944
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP041964 Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1 13608-13642 2 0.943
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP041964 Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1 57520-57554 2 0.943
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP020883 Xanthomonas citri pv. citri strain TX160042 plasmid unnamed1, complete sequence 10886-10920 2 0.943
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NC_010509 Methylobacterium radiotolerans JCM 2831 plasmid pMRAD02, complete sequence 16926-16960 2 0.943
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP020886 Xanthomonas citri pv. citri strain TX160149 plasmid unnamed1, complete sequence 98116-98150 2 0.943
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP013007 Xanthomonas citri pv. malvacearum strain XcmN1003 plasmid pXcmN, complete sequence 9727-9761 2 0.943
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP020890 Xanthomonas citri pv. citri strain TX160197 plasmid unnamed1, complete sequence 115611-115645 2 0.943
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 CP020972 Xanthomonas axonopodis pv. phaseoli strain CFBP6546R plasmid pA, complete sequence 44930-44964 3 0.914
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP021007 Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pC, complete sequence 5857-5891 3 0.914
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP021007 Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pC, complete sequence 44724-44758 3 0.914
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP021007 Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pC, complete sequence 55554-55588 3 0.914
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP020994 Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pC, complete sequence 7399-7433 3 0.914
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP020968 Xanthomonas phaseoli pv. phaseoli strain CFBP6164 plasmid pA, complete sequence 49826-49860 3 0.914
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 CP022269 Xanthomonas citri pv. vignicola strain CFBP7112 plasmid plB, complete sequence 18889-18923 3 0.914
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP021020 Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 plasmid pC, complete sequence 48822-48856 3 0.914
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP012061 Xanthomonas sp. ISO98C4 plasmid pNX59, complete sequence 17460-17494 3 0.914
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP020976 Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pA 9504-9538 3 0.914
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP020976 Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pA 74483-74517 3 0.914
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP020977 Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pC 14194-14228 3 0.914
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP012056 Xanthomonas citri pv. fuscans strain ISO12C3 plasmid pXff45, complete sequence 21190-21224 3 0.914
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP012054 Xanthomonas citri pv. fuscans strain ISO118C1 plasmid pXff45, complete sequence 21190-21224 3 0.914
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP021003 Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166 plasmid pC, complete sequence 29501-29535 3 0.914
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP020965 Xanthomonas phaseoli pv. phaseoli strain CFBP412 plasmid pA, complete sequence 37106-37140 3 0.914
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP012052 Xanthomonas citri pv. fuscans strain ISO118C5 plasmid pXff45, complete sequence 21190-21224 3 0.914
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 CP021014 Xanthomonas citri pv. phaseoli var. fuscans strain CFBP7767 plasmid pC, complete sequence 17652-17686 3 0.914
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP012058 Xanthomonas phaseoli pv. phaseoli strain ISO98C12 plasmid pXap59, complete sequence 17461-17495 3 0.914
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP012064 Xanthomonas phaseoli pv. phaseoli strain ISO18C8 plasmid pXap59, complete sequence 17462-17496 3 0.914
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP012049 Xanthomonas phaseoli pv. phaseoli strain ISO18C2 plasmid pXap59, complete sequence 17462-17496 3 0.914
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NC_022542 Xanthomonas citri pv. fuscans plasmid plc, complete sequence 19724-19758 3 0.914
CP036254_2 2.31|346380|35|CP036254|CRISPRCasFinder,CRT 346380-346414 35 NZ_CP020994 Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pC, complete sequence 49432-49466 4 0.886
CP036254_2 2.24|345921|34|CP036254|PILER-CR,CRISPRCasFinder,CRT 345921-345954 34 MG250483 Aeromonas phage Ah1, complete genome 93754-93787 7 0.794
CP036254_2 2.28|346183|34|CP036254|PILER-CR,CRISPRCasFinder,CRT 346183-346216 34 LR134125 Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5 314044-314077 7 0.794
CP036254_2 2.35|346660|34|CP036254|CRISPRCasFinder,CRT,PILER-CR 346660-346693 34 NZ_CP029356 Azospirillum sp. CFH 70021 plasmid unnamed1 369189-369222 7 0.794
CP036254_2 2.1|344409|34|CP036254|PILER-CR,CRISPRCasFinder,CRT 344409-344442 34 NZ_CP015092 Pelagibaca abyssi strain JLT2014 plasmid pPABY3, complete sequence 47271-47304 8 0.765
CP036254_2 2.1|344409|34|CP036254|PILER-CR,CRISPRCasFinder,CRT 344409-344442 34 NZ_CP015092 Pelagibaca abyssi strain JLT2014 plasmid pPABY3, complete sequence 131483-131516 8 0.765
CP036254_2 2.1|344409|34|CP036254|PILER-CR,CRISPRCasFinder,CRT 344409-344442 34 NZ_CP040758 Paracoccus sp. 2251 plasmid unnamed7, complete sequence 58614-58647 8 0.765
CP036254_2 2.1|344409|34|CP036254|PILER-CR,CRISPRCasFinder,CRT 344409-344442 34 NZ_CP040760 Paracoccus sp. 2251 plasmid unnamed6, complete sequence 119657-119690 8 0.765
CP036254_2 2.13|345202|34|CP036254|PILER-CR,CRISPRCasFinder,CRT 345202-345235 34 NC_021307 Mycobacterium phage Severus, complete genome 43837-43870 9 0.735
CP036254_2 2.18|345528|34|CP036254|PILER-CR,CRISPRCasFinder,CRT 345528-345561 34 NZ_CP046333 Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3 1695307-1695340 9 0.735
CP036254_2 2.18|345528|34|CP036254|PILER-CR,CRISPRCasFinder,CRT 345528-345561 34 NC_007974 Cupriavidus metallidurans CH34 megaplasmid, complete sequence 1931995-1932028 9 0.735
CP036254_2 2.29|346248|34|CP036254|PILER-CR,CRISPRCasFinder,CRT 346248-346281 34 NZ_CP034156 Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence 537829-537862 9 0.735
CP036254_2 2.34|346594|35|CP036254|CRISPRCasFinder,CRT,PILER-CR 346594-346628 35 NZ_CP029987 Sphingomonas sp. FARSPH plasmid p02, complete sequence 49190-49224 9 0.743
CP036254_2 2.35|346660|34|CP036254|CRISPRCasFinder,CRT,PILER-CR 346660-346693 34 NZ_CP016593 Ketogulonicigenium vulgare strain SKV plasmid pKvSKV1, complete sequence 4089-4122 9 0.735
CP036254_2 2.35|346660|34|CP036254|CRISPRCasFinder,CRT,PILER-CR 346660-346693 34 NC_017386 Ketogulonicigenium vulgare WSH-001 plasmid 1, complete sequence 207268-207301 9 0.735
CP036254_2 2.35|346660|34|CP036254|CRISPRCasFinder,CRT,PILER-CR 346660-346693 34 NC_014621 Ketogulonicigenium vulgare Y25 plasmid pYP1, complete sequence 174348-174381 9 0.735
CP036254_2 2.35|346660|34|CP036254|CRISPRCasFinder,CRT,PILER-CR 346660-346693 34 NZ_CP012909 Ketogulonicigenium vulgare strain Hbe602 plasmid 1, complete sequence 4089-4122 9 0.735
CP036254_2 2.35|346660|34|CP036254|CRISPRCasFinder,CRT,PILER-CR 346660-346693 34 NC_013857 Azospirillum sp. B510 plasmid pAB510c, complete sequence 59733-59766 9 0.735
CP036254_2 2.2|344474|36|CP036254|PILER-CR,CRISPRCasFinder,CRT 344474-344509 36 NZ_CP039340 Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence 803920-803955 10 0.722
CP036254_2 2.38|346858|34|CP036254|CRISPRCasFinder,CRT,PILER-CR 346858-346891 34 NC_021289 Burkholderia insecticola plasmid p1, complete sequence 457457-457490 10 0.706
CP036254_2 2.18|345528|34|CP036254|PILER-CR,CRISPRCasFinder,CRT 345528-345561 34 NZ_CP022581 Gordonia rubripertincta strain CWB2 plasmid pGCWB2, complete sequence 74970-75003 11 0.676

1. spacer 2.2|344474|36|CP036254|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018474 (Xanthomonas perforans strain LH3 plasmid pLH3.3, complete sequence) position: , mismatch: 0, identity: 1.0

accaccaccggatcaagcggcacggtgcgcaccagc	CRISPR spacer
accaccaccggatcaagcggcacggtgcgcaccagc	Protospacer
************************************

2. spacer 2.2|344474|36|CP036254|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018734 (Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.3, complete sequence) position: , mismatch: 0, identity: 1.0

accaccaccggatcaagcggcacggtgcgcaccagc	CRISPR spacer
accaccaccggatcaagcggcacggtgcgcaccagc	Protospacer
************************************

3. spacer 2.2|344474|36|CP036254|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018730 (Xanthomonas gardneri strain JS749-3 plasmid pJS749-3.2, complete sequence) position: , mismatch: 0, identity: 1.0

accaccaccggatcaagcggcacggtgcgcaccagc	CRISPR spacer
accaccaccggatcaagcggcacggtgcgcaccagc	Protospacer
************************************

4. spacer 2.2|344474|36|CP036254|PILER-CR,CRISPRCasFinder,CRT matches to AP019683 (Xanthomonas campestris pv. campestris MAFF106712 pXcc1 plasmid DNA, complete genome) position: , mismatch: 0, identity: 1.0

accaccaccggatcaagcggcacggtgcgcaccagc	CRISPR spacer
accaccaccggatcaagcggcacggtgcgcaccagc	Protospacer
************************************

5. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP018476 (Xanthomonas perforans strain LH3 plasmid pLH3.2, complete sequence) position: , mismatch: 1, identity: 0.971

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccggcaggga	Protospacer
**********************************.

6. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP018476 (Xanthomonas perforans strain LH3 plasmid pLH3.2, complete sequence) position: , mismatch: 1, identity: 0.971

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccggcaggga	Protospacer
**********************************.

7. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP041964 (Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1) position: , mismatch: 1, identity: 0.971

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccggcaggga	Protospacer
**********************************.

8. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP041964 (Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1) position: , mismatch: 1, identity: 0.971

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccggcaggga	Protospacer
**********************************.

9. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP019227 (Xanthomonas oryzae pv. oryzae strain IX-280 plasmid pXOO43, complete sequence) position: , mismatch: 1, identity: 0.971

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccggcaggga	Protospacer
**********************************.

10. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP018853 (Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.3, complete sequence) position: , mismatch: 1, identity: 0.971

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccggcaggga	Protospacer
**********************************.

11. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP018853 (Xanthomonas citri pv. citri strain LJ207-7 plasmid pLJ207-7.3, complete sequence) position: , mismatch: 1, identity: 0.971

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccggcaggga	Protospacer
**********************************.

12. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP022265 (Xanthomonas citri pv. vignicola strain CFBP7111 plasmid plC, complete sequence) position: , mismatch: 1, identity: 0.971

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccggcaggga	Protospacer
**********************************.

13. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP022265 (Xanthomonas citri pv. vignicola strain CFBP7111 plasmid plC, complete sequence) position: , mismatch: 1, identity: 0.971

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccggcaggga	Protospacer
**********************************.

14. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP022266 (Xanthomonas citri pv. vignicola strain CFBP7111 plasmid plB, complete sequence) position: , mismatch: 1, identity: 0.971

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccggcaggga	Protospacer
**********************************.

15. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP018857 (Xanthomonas citri pv. citri strain LH276 plasmid pLH276.3, complete sequence) position: , mismatch: 1, identity: 0.971

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccggcaggga	Protospacer
**********************************.

16. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP018857 (Xanthomonas citri pv. citri strain LH276 plasmid pLH276.3, complete sequence) position: , mismatch: 1, identity: 0.971

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccggcaggga	Protospacer
**********************************.

17. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP024080 (Xanthomonas citri pv. citri strain Xcc29-1 plasmid pXAC47, complete sequence) position: , mismatch: 1, identity: 0.971

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccggcaggga	Protospacer
**********************************.

18. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP023161 (Xanthomonas citri pv. malvacearum strain MS14003 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.971

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccggcaggga	Protospacer
**********************************.

19. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP017023 (Xanthomonas citri pv. malvacearum strain MSCT plasmid pMSCT60kb, complete sequence) position: , mismatch: 1, identity: 0.971

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccggcaggga	Protospacer
**********************************.

20. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NC_020798 (Xanthomonas axonopodis Xac29-1 plasmid pXAC47, complete sequence) position: , mismatch: 1, identity: 0.971

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccggcaggga	Protospacer
**********************************.

21. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NC_020798 (Xanthomonas axonopodis Xac29-1 plasmid pXAC47, complete sequence) position: , mismatch: 1, identity: 0.971

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccggcaggga	Protospacer
**********************************.

22. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to NZ_CP018464 (Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence) position: , mismatch: 1, identity: 0.969

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggtccgcaaacatggcactggaggtttga	Protospacer
*****.**************************

23. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to NZ_CP018464 (Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence) position: , mismatch: 1, identity: 0.969

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggtccgcaaacatggcactggaggtttga	Protospacer
*****.**************************

24. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to NZ_CP020887 (Xanthomonas citri pv. citri strain TX160149 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggtccgcaaacatggcactggaggtttga	Protospacer
*****.**************************

25. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to NZ_CP020887 (Xanthomonas citri pv. citri strain TX160149 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggtccgcaaacatggcactggaggtttga	Protospacer
*****.**************************

26. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to NZ_CP020888 (Xanthomonas citri pv. citri strain TX160149 plasmid unnamed3, complete sequence) position: , mismatch: 1, identity: 0.969

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggtccgcaaacatggcactggaggtttga	Protospacer
*****.**************************

27. spacer 4.1|2827221|32|CP036254|CRISPRCasFinder matches to NZ_CP013005 (Xanthomonas citri pv. malvacearum strain XcmH1005 plasmid pXcmH, complete sequence) position: , mismatch: 1, identity: 0.969

tgtggcccgcaaacatggcactggaggtttga	CRISPR spacer
tgtggtccgcaaacatggcactggaggtttga	Protospacer
*****.**************************

28. spacer 1.1|292929|44|CP036254|CRISPRCasFinder matches to NZ_CP018464 (Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence) position: , mismatch: 2, identity: 0.955

cgacgacgtagcgtaacgaaaactggcaattccagcacaccgat	CRISPR spacer
ccaggacgtagcgtaacgaaaactggcaattccagcacaccgat	Protospacer
* * ****************************************

29. spacer 1.1|292929|44|CP036254|CRISPRCasFinder matches to NZ_CP018464 (Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence) position: , mismatch: 2, identity: 0.955

cgacgacgtagcgtaacgaaaactggcaattccagcacaccgat	CRISPR spacer
ccaggacgtagcgtaacgaaaactggcaattccagcacaccgat	Protospacer
* * ****************************************

30. spacer 1.1|292929|44|CP036254|CRISPRCasFinder matches to NZ_CP022264 (Xanthomonas citri pv. vignicola strain CFBP7111 plasmid plA, complete sequence) position: , mismatch: 2, identity: 0.955

cgacgacgtagcgtaacgaaaactggcaattccagcacaccgat	CRISPR spacer
ccaggacgtagcgtaacgaaaactggcaattccagcacaccgat	Protospacer
* * ****************************************

31. spacer 1.1|292929|44|CP036254|CRISPRCasFinder matches to NZ_CP020887 (Xanthomonas citri pv. citri strain TX160149 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.955

cgacgacgtagcgtaacgaaaactggcaattccagcacaccgat	CRISPR spacer
ccaggacgtagcgtaacgaaaactggcaattccagcacaccgat	Protospacer
* * ****************************************

32. spacer 1.1|292929|44|CP036254|CRISPRCasFinder matches to NZ_CP020887 (Xanthomonas citri pv. citri strain TX160149 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.955

cgacgacgtagcgtaacgaaaactggcaattccagcacaccgat	CRISPR spacer
ccaggacgtagcgtaacgaaaactggcaattccagcacaccgat	Protospacer
* * ****************************************

33. spacer 1.1|292929|44|CP036254|CRISPRCasFinder matches to NZ_CP020888 (Xanthomonas citri pv. citri strain TX160149 plasmid unnamed3, complete sequence) position: , mismatch: 2, identity: 0.955

cgacgacgtagcgtaacgaaaactggcaattccagcacaccgat	CRISPR spacer
ccaggacgtagcgtaacgaaaactggcaattccagcacaccgat	Protospacer
* * ****************************************

34. spacer 1.1|292929|44|CP036254|CRISPRCasFinder matches to NZ_CP020888 (Xanthomonas citri pv. citri strain TX160149 plasmid unnamed3, complete sequence) position: , mismatch: 2, identity: 0.955

cgacgacgtagcgtaacgaaaactggcaattccagcacaccgat	CRISPR spacer
ccaggacgtagcgtaacgaaaactggcaattccagcacaccgat	Protospacer
* * ****************************************

35. spacer 1.1|292929|44|CP036254|CRISPRCasFinder matches to NZ_CP013005 (Xanthomonas citri pv. malvacearum strain XcmH1005 plasmid pXcmH, complete sequence) position: , mismatch: 2, identity: 0.955

cgacgacgtagcgtaacgaaaactggcaattccagcacaccgat	CRISPR spacer
ccaggacgtagcgtaacgaaaactggcaattccagcacaccgat	Protospacer
* * ****************************************

36. spacer 2.2|344474|36|CP036254|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020965 (Xanthomonas phaseoli pv. phaseoli strain CFBP412 plasmid pA, complete sequence) position: , mismatch: 2, identity: 0.944

accaccaccggatcaagcggcacggtgcgcaccagc	CRISPR spacer
actaccaccggatcaagcgggacggtgcgcaccagc	Protospacer
**.***************** ***************

37. spacer 2.2|344474|36|CP036254|PILER-CR,CRISPRCasFinder,CRT matches to CP030168 (Xanthomonas citri pv. punicae strain LMG7504 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.944

accaccaccggatcaagcggcacggtgcgcaccagc	CRISPR spacer
accaccaccggatcgagtggcacggtgcgcaccagc	Protospacer
**************.**.******************

38. spacer 2.2|344474|36|CP036254|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020976 (Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pA) position: , mismatch: 2, identity: 0.944

accaccaccggatcaagcggcacggtgcgcaccagc	CRISPR spacer
actaccaccggatcaagcgggacggtgcgcaccagc	Protospacer
**.***************** ***************

39. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP041964 (Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1) position: , mismatch: 2, identity: 0.943

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccgacaggga	Protospacer
****************************.*****.

40. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP041964 (Xanthomonas citri pv. glycines strain 1157 plasmid unnamed1) position: , mismatch: 2, identity: 0.943

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccgacaggga	Protospacer
****************************.*****.

41. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP020883 (Xanthomonas citri pv. citri strain TX160042 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.943

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccgacaggga	Protospacer
****************************.*****.

42. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NC_010509 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD02, complete sequence) position: , mismatch: 2, identity: 0.943

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagggcaacgctcccgccgccggcaggga	Protospacer
*********.************************.

43. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP020886 (Xanthomonas citri pv. citri strain TX160149 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.943

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccgacaggga	Protospacer
****************************.*****.

44. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP013007 (Xanthomonas citri pv. malvacearum strain XcmN1003 plasmid pXcmN, complete sequence) position: , mismatch: 2, identity: 0.943

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccgacaggga	Protospacer
****************************.*****.

45. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP020890 (Xanthomonas citri pv. citri strain TX160197 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.943

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgccgccgacaggga	Protospacer
****************************.*****.

46. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to CP020972 (Xanthomonas axonopodis pv. phaseoli strain CFBP6546R plasmid pA, complete sequence) position: , mismatch: 3, identity: 0.914

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgaggacaacgctcccgccgccggcaggga	Protospacer
*********..***********************.

47. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP021007 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pC, complete sequence) position: , mismatch: 3, identity: 0.914

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgaggacaacgctcccgccgccggcaggga	Protospacer
*********..***********************.

48. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP021007 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pC, complete sequence) position: , mismatch: 3, identity: 0.914

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgaggacaacgctcccgccgccggcaggga	Protospacer
*********..***********************.

49. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP021007 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pC, complete sequence) position: , mismatch: 3, identity: 0.914

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgaggacaacgctcccgccgccggcaggga	Protospacer
*********..***********************.

50. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP020994 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pC, complete sequence) position: , mismatch: 3, identity: 0.914

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgaggacaacgctcccgccgccggcaggga	Protospacer
*********..***********************.

51. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP020968 (Xanthomonas phaseoli pv. phaseoli strain CFBP6164 plasmid pA, complete sequence) position: , mismatch: 3, identity: 0.914

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgaggacaacgctcccgccgccggcaggga	Protospacer
*********..***********************.

52. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to CP022269 (Xanthomonas citri pv. vignicola strain CFBP7112 plasmid plB, complete sequence) position: , mismatch: 3, identity: 0.914

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgagagcaacgctcccgctgccgacaggga	Protospacer
***********************.****.*****.

53. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP021020 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 plasmid pC, complete sequence) position: , mismatch: 3, identity: 0.914

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgaggacaacgctcccgccgccggcaggga	Protospacer
*********..***********************.

54. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP012061 (Xanthomonas sp. ISO98C4 plasmid pNX59, complete sequence) position: , mismatch: 3, identity: 0.914

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgaggacaacgctcccgccgccggcaggga	Protospacer
*********..***********************.

55. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP020976 (Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pA) position: , mismatch: 3, identity: 0.914

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgaggacaacgctcccgccgccggcaggga	Protospacer
*********..***********************.

56. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP020976 (Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pA) position: , mismatch: 3, identity: 0.914

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgaggacaacgctcccgccgccggcaggga	Protospacer
*********..***********************.

57. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP020977 (Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pC) position: , mismatch: 3, identity: 0.914

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgaggacaacgctcccgccgccggcaggga	Protospacer
*********..***********************.

58. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP012056 (Xanthomonas citri pv. fuscans strain ISO12C3 plasmid pXff45, complete sequence) position: , mismatch: 3, identity: 0.914

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgaggacaacgctcccgccgccggcaggga	Protospacer
*********..***********************.

59. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP012054 (Xanthomonas citri pv. fuscans strain ISO118C1 plasmid pXff45, complete sequence) position: , mismatch: 3, identity: 0.914

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgaggacaacgctcccgccgccggcaggga	Protospacer
*********..***********************.

60. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP021003 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166 plasmid pC, complete sequence) position: , mismatch: 3, identity: 0.914

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgaggacaacgctcccgccgccggcaggga	Protospacer
*********..***********************.

61. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP020965 (Xanthomonas phaseoli pv. phaseoli strain CFBP412 plasmid pA, complete sequence) position: , mismatch: 3, identity: 0.914

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgaggacaacgctcccgccgccggcaggga	Protospacer
*********..***********************.

62. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP012052 (Xanthomonas citri pv. fuscans strain ISO118C5 plasmid pXff45, complete sequence) position: , mismatch: 3, identity: 0.914

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgaggacaacgctcccgccgccggcaggga	Protospacer
*********..***********************.

63. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to CP021014 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP7767 plasmid pC, complete sequence) position: , mismatch: 3, identity: 0.914

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgaggacaacgctcccgccgccggcaggga	Protospacer
*********..***********************.

64. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP012058 (Xanthomonas phaseoli pv. phaseoli strain ISO98C12 plasmid pXap59, complete sequence) position: , mismatch: 3, identity: 0.914

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgaggacaacgctcccgccgccggcaggga	Protospacer
*********..***********************.

65. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP012064 (Xanthomonas phaseoli pv. phaseoli strain ISO18C8 plasmid pXap59, complete sequence) position: , mismatch: 3, identity: 0.914

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgaggacaacgctcccgccgccggcaggga	Protospacer
*********..***********************.

66. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP012049 (Xanthomonas phaseoli pv. phaseoli strain ISO18C2 plasmid pXap59, complete sequence) position: , mismatch: 3, identity: 0.914

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgaggacaacgctcccgccgccggcaggga	Protospacer
*********..***********************.

67. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NC_022542 (Xanthomonas citri pv. fuscans plasmid plc, complete sequence) position: , mismatch: 3, identity: 0.914

agcgccgagagcaacgctcccgccgccggcagggg	CRISPR spacer
agcgccgaggacaacgctcccgccgccggcaggga	Protospacer
*********..***********************.

68. spacer 2.31|346380|35|CP036254|CRISPRCasFinder,CRT matches to NZ_CP020994 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pC, complete sequence) position: , mismatch: 4, identity: 0.886

agcgccgagagcaacgctcccgccgccggcagggg-	CRISPR spacer
agcgccgaggacaacgctcccgccg-cggcagggag	Protospacer
*********..************** ********. 

69. spacer 2.24|345921|34|CP036254|PILER-CR,CRISPRCasFinder,CRT matches to MG250483 (Aeromonas phage Ah1, complete genome) position: , mismatch: 7, identity: 0.794

ccattatgtcaataatgggaattggtctagctat	CRISPR spacer
acaatgcgtcaatgatgggaattggtctacctag	Protospacer
 ** *..******.*************** *** 

70. spacer 2.28|346183|34|CP036254|PILER-CR,CRISPRCasFinder,CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 7, identity: 0.794

ttgccatcggctttgagaatgccggcatccagcc	CRISPR spacer
ttgccttcggctttgataatgccggtggcgagca	Protospacer
***** ********** ********.. * *** 

71. spacer 2.35|346660|34|CP036254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 7, identity: 0.794

ccggacttccaggcacgcctgcgcgatgcgatcg	CRISPR spacer
ccggacttccagggacgcctgcgcgtgatggccg	Protospacer
************* ***********  ..*..**

72. spacer 2.1|344409|34|CP036254|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015092 (Pelagibaca abyssi strain JLT2014 plasmid pPABY3, complete sequence) position: , mismatch: 8, identity: 0.765

gtcgctgaccgtggcctacgcggcgtgcacgtct	CRISPR spacer
ctcgccgaccgtggcctgcgcggcgtgaagctgg	Protospacer
 ****.***********.********* *  *  

73. spacer 2.1|344409|34|CP036254|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015092 (Pelagibaca abyssi strain JLT2014 plasmid pPABY3, complete sequence) position: , mismatch: 8, identity: 0.765

gtcgctgaccgtggcctacgcggcgtgcacgtct	CRISPR spacer
ctcgccgaccgtggcctgcgcggcgtgaagctgg	Protospacer
 ****.***********.********* *  *  

74. spacer 2.1|344409|34|CP036254|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040758 (Paracoccus sp. 2251 plasmid unnamed7, complete sequence) position: , mismatch: 8, identity: 0.765

gtcgctgaccgtggcctacgcggcgtgcacgtct	CRISPR spacer
ctcgccgaccgcggcctacgcggcgtgaagctgg	Protospacer
 ****.*****.*************** *  *  

75. spacer 2.1|344409|34|CP036254|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040760 (Paracoccus sp. 2251 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.765

gtcgctgaccgtggcctacgcggcgtgcacgtct	CRISPR spacer
ctcgccgaccgcggcctacgcggcgtgaagctgg	Protospacer
 ****.*****.*************** *  *  

76. spacer 2.13|345202|34|CP036254|PILER-CR,CRISPRCasFinder,CRT matches to NC_021307 (Mycobacterium phage Severus, complete genome) position: , mismatch: 9, identity: 0.735

atcatagacgctgcgagcaaggacggcggtagcg	CRISPR spacer
tacaccttcgctgcgatcaaggtcggcggtagct	Protospacer
  **.   ******** ***** ********** 

77. spacer 2.18|345528|34|CP036254|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 9, identity: 0.735

atagaggcatggctgctgcgcacgcgctcatctc	CRISPR spacer
atgcaggcatggatgcggcgcacgcgctcgatca	Protospacer
**. ******** *** ************. .. 

78. spacer 2.18|345528|34|CP036254|PILER-CR,CRISPRCasFinder,CRT matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.735

atagaggcatggctgctgcgcacgcgctcatctc	CRISPR spacer
atgcaggcatggatgcggcgcacgcgctcgatca	Protospacer
**. ******** *** ************. .. 

79. spacer 2.29|346248|34|CP036254|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034156 (Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.735

--aatggtttgacggcagcgaccgggtcccatcgtc	CRISPR spacer
acggcggtcc--cggaagcggccgggtcccatcgtc	Protospacer
  ...***..  *** ****.***************

80. spacer 2.34|346594|35|CP036254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029987 (Sphingomonas sp. FARSPH plasmid p02, complete sequence) position: , mismatch: 9, identity: 0.743

-atgtatatgacagcgttccggtcgatgctagcggc	CRISPR spacer
agcttacgcg-cagcgttcaggttgatgctagcggc	Protospacer
 .. **...* ******** ***.************

81. spacer 2.35|346660|34|CP036254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016593 (Ketogulonicigenium vulgare strain SKV plasmid pKvSKV1, complete sequence) position: , mismatch: 9, identity: 0.735

ccggacttccaggcacgcctgcgcgatgcgatcg	CRISPR spacer
gatggcggcgaggcgcgcctgcgcgacgcgatcg	Protospacer
   *.*  * ****.***********.*******

82. spacer 2.35|346660|34|CP036254|CRISPRCasFinder,CRT,PILER-CR matches to NC_017386 (Ketogulonicigenium vulgare WSH-001 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.735

ccggacttccaggcacgcctgcgcgatgcgatcg	CRISPR spacer
gatggcggcgaggcgcgcctgcgcgacgcgatcg	Protospacer
   *.*  * ****.***********.*******

83. spacer 2.35|346660|34|CP036254|CRISPRCasFinder,CRT,PILER-CR matches to NC_014621 (Ketogulonicigenium vulgare Y25 plasmid pYP1, complete sequence) position: , mismatch: 9, identity: 0.735

ccggacttccaggcacgcctgcgcgatgcgatcg	CRISPR spacer
gatggcggcgaggcgcgcctgcgcgacgcgatcg	Protospacer
   *.*  * ****.***********.*******

84. spacer 2.35|346660|34|CP036254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012909 (Ketogulonicigenium vulgare strain Hbe602 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.735

ccggacttccaggcacgcctgcgcgatgcgatcg	CRISPR spacer
gatggcggcgaggcgcgcctgcgcgacgcgatcg	Protospacer
   *.*  * ****.***********.*******

85. spacer 2.35|346660|34|CP036254|CRISPRCasFinder,CRT,PILER-CR matches to NC_013857 (Azospirillum sp. B510 plasmid pAB510c, complete sequence) position: , mismatch: 9, identity: 0.735

ccggacttccaggcacgcctgcgcgatgcgatcg	CRISPR spacer
cccgacttccagggacgcctgcgcctgatggccg	Protospacer
** ********** **********   ..*..**

86. spacer 2.2|344474|36|CP036254|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 10, identity: 0.722

accaccaccggatcaagcggcacggtgcgcaccagc	CRISPR spacer
ccggtcaccggatcatgcggcacggtgcgcagatag	Protospacer
 * ..********** ***************   . 

87. spacer 2.38|346858|34|CP036254|CRISPRCasFinder,CRT,PILER-CR matches to NC_021289 (Burkholderia insecticola plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.706

atcctgcgtttgctcggtgcgattcggctcgaag	CRISPR spacer
cgcttcgacgtgctcggtgcgtttctgctcgaag	Protospacer
  *.*  .. *********** *** ********

88. spacer 2.18|345528|34|CP036254|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022581 (Gordonia rubripertincta strain CWB2 plasmid pGCWB2, complete sequence) position: , mismatch: 11, identity: 0.676

atagaggcatggctgctgcgcacgcgctcatctc	CRISPR spacer
gtctgggcatggccgctgcgcccgcgctcgcggt	Protospacer
.*  .********.******* *******..  .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 283846 : 377337 65 Acidithiobacillus_phage(20.0%) transposase NA
DBSCAN-SWA_2 457890 : 520017 54 Acidithiobacillus_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_3 704057 : 713147 9 Staphylococcus_phage(28.57%) transposase NA
DBSCAN-SWA_4 903269 : 909639 6 Enterobacteria_phage(50.0%) NA NA
DBSCAN-SWA_5 1453114 : 1532153 55 Leptospira_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_6 1780757 : 1851356 56 Bacillus_phage(18.75%) transposase,tRNA,protease NA
DBSCAN-SWA_7 2327659 : 2465704 86 Xanthomonas_phage(40.0%) transposase,plate NA
DBSCAN-SWA_8 2976612 : 3042890 46 Acidithiobacillus_phage(40.0%) transposase,tRNA,protease NA
DBSCAN-SWA_9 3526359 : 3589525 46 Acidithiobacillus_phage(33.33%) transposase,plate NA
DBSCAN-SWA_10 4365521 : 4438989 53 Leptospira_phage(17.65%) transposase,tRNA NA
DBSCAN-SWA_11 4563770 : 4627324 55 Leptospira_phage(25.0%) transposase NA
DBSCAN-SWA_12 4687086 : 4733070 43 Ralstonia_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_13 4866139 : 4895999 18 Ralstonia_phage(33.33%) transposase NA
DBSCAN-SWA_14 4908695 : 4995409 55 Acidithiobacillus_phage(15.38%) transposase NA
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Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
CP036254.1|QBG95532.1|1844608_1844857_-|hypothetical-protein 1844608_1844857_- 82 aa aa NA HTH_Tnp_1,HTH_33 NA 1780757-1851356 yes
CP036254.1|QBG95892.1|2358580_2358946_+|hypothetical-protein 2358580_2358946_+ 121 aa aa NA HTH_LUXR NA 2327659-2465704 yes
CP036254.1|QBG95907.1|2385514_2385871_+|hypothetical-protein 2385514_2385871_+ 118 aa aa NA HTH_38 NA 2327659-2465704 yes
CP036254.1|QBG95908.1|2385948_2386560_+|hypothetical-protein 2385948_2386560_+ 203 aa aa NA HTH_38 NA 2327659-2465704 yes
CP036254.1|QBG95909.1|2386566_2387463_+|hypothetical-protein 2386566_2387463_+ 298 aa aa NA HTH_38 NA 2327659-2465704 yes
CP036254.1|QBG95942.1|2441590_2441779_+|hypothetical-protein 2441590_2441779_+ 62 aa aa NA HTH_33 NA 2327659-2465704 yes
CP036254.1|QBG95943.1|2441942_2442128_+|hypothetical-protein 2441942_2442128_+ 61 aa aa NA HTH_33 NA 2327659-2465704 yes
CP036254.1|QBG96357.1|3036005_3036734_+|hypothetical-protein 3036005_3036734_+ 242 aa aa NA HTH_Tnp_1 NA 2976612-3042890 yes
CP036254.1|QBG97356.1|4420579_4421029_-|hypothetical-protein 4420579_4421029_- 149 aa aa NA HTH_38,HTH_33 NA 4365521-4438989 yes
CP036254.1|QBG98133.1|4731308_4731590_+|hypothetical-protein 4731308_4731590_+ 93 aa aa NA HTH_Tnp_1,HTH_38 NA 4687086-4733070 yes
CP036254.1|QBG97650.1|4868315_4868627_+|hypothetical-protein 4868315_4868627_+ 103 aa aa NA HTH_Tnp_1 NA 4866139-4895999 yes
CP036254.1|QBG97661.1|4897236_4897701_-|hypothetical-protein 4897236_4897701_- 154 aa aa NA HTH_38 NA No NA
CP036254.1|QBG97663.1|4901430_4901877_-|hypothetical-protein 4901430_4901877_- 148 aa aa NA HTH_38 NA No NA
CP036254.1|QBG97714.1|4993592_4993886_+|hypothetical-protein 4993592_4993886_+ 97 aa aa NA HTH_38 NA 4908695-4995409 yes
CP036254.1|QBG98151.1|4996756_4997167_-|DUF2384-domain-containing-protein 4996756_4997167_- 136 aa aa NA HTH_38 NA No NA