CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP025278	Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1913 chromosome, complete genome	2 crisprs	PD-DExK,WYL,csa3,cas3,DEDDh,DinG,RT	1	12	9	0
CP025279	Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1913 plasmid pSLU-1913, complete sequence	0 crisprs	DEDDh,cas14j	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP025278_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025278_1

965214-966524

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

21 spacers

The CRISPR arrays of CP025278_1

>merge|CP025278|1|965214-966524|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGCCTTCGTTATTTACGACATTAACATTAACCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCTTAATGCTTTTTCGTCCGCCCATAGAAATAAGTGTTCCCCGCGCCAGCGGAGATAAACCGGTATCAAAGGTCATCAGGTGTTCGCCTTTCAGCGTGTTCCCCGCGCCAGCGGGGATAAACCAGCAGATTGGTATCTGGTACGACGACTGCCGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGACTGTTAAAATGCTTCAGGACGGTGAAGTAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTCCACTGTACCGCCGACAGGACTTTTTAACGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCAGGCGCTGGACGCGCTGCACAGACAGTCCGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGCGGTCGAGGTGGCGAGGTTGATAGCAGTAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGAATATGTTGATCGGGATTCTGGCCGCACTGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTTATCGCTCTGAGAGTGGCGCTCGTTACTGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGCTGACCATGATTGCAGTCAGGGTCGGCATGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGGAATGATGAAACGAATTAGTAAAAACAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGAAATGGCATAGCCACCCCAGACAGTGGCTTCTGTGTTCCCCGCGCCAGCGGGGATAAACCGGACCGATCCGGGAACAACCGGAACAACGCGGGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCAGTAACGCTGGCGTGATAATTTTGGTCGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGCAATACGACTGGACTGGATTTGATTCATTAACGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGAGCCTGGAGCTCTCGACTCCTGATTTTGGGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGTAACGTCCTTTGCTGGTGTTTTTGTGTCTGTGTTCCCCGCGCCAGCGGGGATAAACCGAAACACCAACATTACGGCACGCAAGAGGTTATGTGTTCCCTGCGCCAGCGGGGATAAACCGGTTGGAGGGCGGTTCTGATGGCGAAACTTATCGTGTTCCCCGCGCCAGCGGGGATAAACCGTACCAACAATTCAGCGTTACGCCAACGGTAACGTGTTCCCCGCGCCAACAAGGATAGCCGT

>CP025278|1|1|965214-966463|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTCGTTATTTACGACATTAACATTAACCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTAATGCTTTTTCGTCCGCCCATAGAAATAA
GTGTTCCCCGCGCCAGCGGAGATAAACCG	GTATCAAAGGTCATCAGGTGTTCGCCTTTCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCA	GCAGATTGGTATCTGGTACGACGACTGCCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACTGTTAAAATGCTTCAGGACGGTGAAGTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCACTGTACCGCCGACAGGACTTTTTAACGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCAGGCGCTGGACGCGCTGCACAGACAGTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGCGGTCGAGGTGGCGAGGTTGATAGCAGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAATATGTTGATCGGGATTCTGGCCGCACTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTTATCGCTCTGAGAGTGGCGCTCGTTACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGCTGACCATGATTGCAGTCAGGGTCGGCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGGAATGATGAAACGAATTAGTAAAAACAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATGGCATAGCCACCCCAGACAGTGGCTTCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACCGATCCGGGAACAACCGGAACAACGCGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGTAACGCTGGCGTGATAATTTTGGTCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAATACGACTGGACTGGATTTGATTCATTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGAGCCTGGAGCTCTCGACTCCTGATTTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTAACGTCCTTTGCTGGTGTTTTTGTGTCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACACCAACATTACGGCACGCAAGAGGTTAT
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GTTGGAGGGCGGTTCTGATGGCGAAACTTATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>CP025278|1|1|965214-966524|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTCGTTATTTACGACATTAACATTAACCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTAATGCTTTTTCGTCCGCCCATAGAAATAA
GTGTTCCCCGCGCCAGCGGAGATAAACCG	GTATCAAAGGTCATCAGGTGTTCGCCTTTCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCA	GCAGATTGGTATCTGGTACGACGACTGCCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACTGTTAAAATGCTTCAGGACGGTGAAGTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCACTGTACCGCCGACAGGACTTTTTAACGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCAGGCGCTGGACGCGCTGCACAGACAGTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGCGGTCGAGGTGGCGAGGTTGATAGCAGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAATATGTTGATCGGGATTCTGGCCGCACTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTTATCGCTCTGAGAGTGGCGCTCGTTACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGCTGACCATGATTGCAGTCAGGGTCGGCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGGAATGATGAAACGAATTAGTAAAAACAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATGGCATAGCCACCCCAGACAGTGGCTTCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACCGATCCGGGAACAACCGGAACAACGCGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGTAACGCTGGCGTGATAATTTTGGTCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAATACGACTGGACTGGATTTGATTCATTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGAGCCTGGAGCTCTCGACTCCTGATTTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTAACGTCCTTTGCTGGTGTTTTTGTGTCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACACCAACATTACGGCACGCAAGAGGTTAT
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GTTGGAGGGCGGTTCTGATGGCGAAACTTATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACCAACAATTCAGCGTTACGCCAACGGTAAC
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>CP025278|1|1|965214-966524|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTCGTTATTTACGACATTAACATTAACCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTAATGCTTTTTCGTCCGCCCATAGAAATAA
GTGTTCCCCGCGCCAGCGGAGATAAACCG	GTATCAAAGGTCATCAGGTGTTCGCCTTTCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCA	GCAGATTGGTATCTGGTACGACGACTGCCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACTGTTAAAATGCTTCAGGACGGTGAAGTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCACTGTACCGCCGACAGGACTTTTTAACGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCAGGCGCTGGACGCGCTGCACAGACAGTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGCGGTCGAGGTGGCGAGGTTGATAGCAGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAATATGTTGATCGGGATTCTGGCCGCACTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTTATCGCTCTGAGAGTGGCGCTCGTTACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGCTGACCATGATTGCAGTCAGGGTCGGCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGGAATGATGAAACGAATTAGTAAAAACAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATGGCATAGCCACCCCAGACAGTGGCTTCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACCGATCCGGGAACAACCGGAACAACGCGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGTAACGCTGGCGTGATAATTTTGGTCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAATACGACTGGACTGGATTTGATTCATTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGAGCCTGGAGCTCTCGACTCCTGATTTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTAACGTCCTTTGCTGGTGTTTTTGTGTCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACACCAACATTACGGCACGCAAGAGGTTAT
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GTTGGAGGGCGGTTCTGATGGCGAAACTTATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACCAACAATTCAGCGTTACGCCAACGGTAAC
GTGTTCCCCGCGCCAACAAGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
CP025278.1\|QBJ50396.1\|955304_956078_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185177
CP025278.1\|QBJ50394.1\|954293_954764_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
CP025278.1\|QBJ50402.1\|964245_964917_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP025278.1\|QBJ54277.1\|967799_967970_+\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	unknown
CP025278.1\|QBJ50395.1\|954778_955285_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178
CP025278.1\|QBJ50410.1\|973909_974134_-\|hypothetical-protein	unknown	unknown	unknown
CP025278.1\|QBJ50398.1\|958869_959457_-\|fimbrial-protein-SteA	unknown	unknown	gnl\|CDD\|185169
CP025278.1\|QBJ50400.1\|961091_962729_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
CP025278.1\|QBJ50403.1\|966621_967419_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
CP025278.1\|QBJ50408.1\|972516_972759_-\|hypothetical-protein	unknown	unknown	unknown
CP025278.1\|QBJ50404.1\|967508_967871_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP025278.1\|QBJ50399.1\|960063_960864_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP025278.1\|QBJ50405.1\|968306_970106_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
CP025278.1\|QBJ50406.1\|970105_971818_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
CP025278.1\|QBJ50401.1\|962811_964110_+\|enolase	unknown	unknown	gnl\|CDD\|234617
CP025278.1\|QBJ50397.1\|956090_958790_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
CP025278.1\|QBJ50411.1\|977000_978047_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP025278.1\|QBJ50407.1\|971893_972628_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP025278.1\|QBJ50409.1\|972840_973794_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
CP025278.1\|QBJ50393.1\|953760_954297_-\|fimbrial-protein-SteF	unknown	unknown	gnl\|CDD\|185168

Protein	Function_ID	Function_description	E-value
CP025278.1\|QBJ50396.1\|955304_956078_-\|fimbrial-protein	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
CP025278.1\|QBJ50394.1\|954293_954764_-\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	1.41178e-100
CP025278.1\|QBJ50402.1\|964245_964917_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
CP025278.1\|QBJ50395.1\|954778_955285_-\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	1.2915e-104
CP025278.1\|QBJ50398.1\|958869_959457_-\|fimbrial-protein-SteA	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	5.36845e-100
CP025278.1\|QBJ50400.1\|961091_962729_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP025278.1\|QBJ50403.1\|966621_967419_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	9.9681e-103
CP025278.1\|QBJ50404.1\|967508_967871_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
CP025278.1\|QBJ50399.1\|960063_960864_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
CP025278.1\|QBJ50405.1\|968306_970106_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP025278.1\|QBJ50406.1\|970105_971818_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP025278.1\|QBJ50401.1\|962811_964110_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP025278.1\|QBJ50397.1\|956090_958790_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
CP025278.1\|QBJ50411.1\|977000_978047_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP025278.1\|QBJ50407.1\|971893_972628_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	3.66931e-138
CP025278.1\|QBJ50409.1\|972840_973794_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP025278.1\|QBJ50393.1\|953760_954297_-\|fimbrial-protein-SteF	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	3.75281e-120

>CP025278.1|QBJ50402.1|964245_964917_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>CP025278.1|QBJ50401.1|962811_964110_+|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP025278.1|QBJ50400.1|961091_962729_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>CP025278.1|QBJ50399.1|960063_960864_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>CP025278.1|QBJ50398.1|958869_959457_-|fimbrial-protein-SteA
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDTILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>CP025278.1|QBJ50397.1|956090_958790_-|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSVSPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVISDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNSYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGSGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKMLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>CP025278.1|QBJ50396.1|955304_956078_-|fimbrial-protein
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKMTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>CP025278.1|QBJ50395.1|954778_955285_-|fimbrial-protein
MTMLTRWKMLVLLCGGFVAGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDASQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGNNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
>CP025278.1|QBJ50394.1|954293_954764_-|fimbrial-protein
MKRVLILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSANALTTNVPELGIELQQNGTVFPPGTSLTIDESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>CP025278.1|QBJ50393.1|953760_954297_-|fimbrial-protein-SteF
MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVVVTFQGVEDSTLPGLLALEPSSEASGFAIGVETAAQQPVSINATEGTAFVLKEGITTINLQARLQKYAGEDVMPGEFSGTATVSFEYQ
>CP025278.1|QBJ50403.1|966621_967419_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSREVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>CP025278.1|QBJ50404.1|967508_967871_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>CP025278.1|QBJ54277.1|967799_967970_+|6-pyruvoyl-tetrahydrobiopterin-synthase
MPFRHVRQAVSGFKGEIFIQRGGHDELSGNKKTAVGYRKAHFLSLTKTILRLVTGN
>CP025278.1|QBJ50405.1|968306_970106_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLTDTAFAVFGLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNYIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>CP025278.1|QBJ50406.1|970105_971818_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYQENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>CP025278.1|QBJ50407.1|971893_972628_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAYLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP025278.1|QBJ50408.1|972516_972759_-|hypothetical-protein
MLLGTHSLAAFKQLELFWVYNQFKIRLPAGFFIAASIIIPRKDNYPSCSPHSRFSPKNRVSSSAMPGSHLRVVCVSPTDR
>CP025278.1|QBJ50409.1|972840_973794_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDTVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>CP025278.1|QBJ50410.1|973909_974134_-|hypothetical-protein
MLTQLYIFFRNIYPTNNYYKFFRSFLLEEAIKEASSNAPLHKPKFKKTTICGESSTFCLNYRHHKGLPTINVLY
>CP025278.1|QBJ50411.1|977000_978047_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGIDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS

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Crispr_ID: CP025278_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025278_2

976287-976986

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

11 spacers

The CRISPR arrays of CP025278_2

>merge|CP025278|2|976287-976986|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGCGGGTGATTTTAATGATGTGCTGACTACCGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGTTCTACAGTAAGGTTTACAGCCTGAGCAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTACGGAAATTTGTGTCAGATATTGCCGGGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTGCCCACAGTTCGTCGTGAATTGCGCAGGATAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTCTCAATAAATTTTCCCGGCTGCCGGATCTGTGTTCCCCGCGCCAGCGGGGATAAACCGATTGGGACCATTCCAATGGTCAGTTTCACGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGAAACCAGAATTGCTGAAGTAAATTGCAAAAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGATATCGAACGGGTTACGGCTGTCGGTGTAACTGTGTTCCCCGCGTCAGCGGGGATAAACCGATATTTTGGCAACTCGTCGTACATTATCGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGTCGCACAACGCCTGGATATCCGCCCATCGGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGTCTTTGTGGTAAATATGGAATCGATTAACCCCGTGTTCCCCGCGCCAGCGGGGATAAACAC

>CP025278|2|2|976287-976986|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGGTGATTTTAATGATGTGCTGACTACCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTTCTACAGTAAGGTTTACAGCCTGAGCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTACGGAAATTTGTGTCAGATATTGCCGGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCCCACAGTTCGTCGTGAATTGCGCAGGATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTCTCAATAAATTTTCCCGGCTGCCGGATCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTGGGACCATTCCAATGGTCAGTTTCACGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACCAGAATTGCTGAAGTAAATTGCAAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATATCGAACGGGTTACGGCTGTCGGTGTAACT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	ATATTTTGGCAACTCGTCGTACATTATCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGCACAACGCCTGGATATCCGCCCATCGGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTTTGTGGTAAATATGGAATCGATTAACCCC
GTGTTCCCCGCGCCAGCGGGGATAAACAC

>CP025278|2|2|976287-976986|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGGTGATTTTAATGATGTGCTGACTACCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTTCTACAGTAAGGTTTACAGCCTGAGCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTACGGAAATTTGTGTCAGATATTGCCGGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCCCACAGTTCGTCGTGAATTGCGCAGGATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTCTCAATAAATTTTCCCGGCTGCCGGATCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTGGGACCATTCCAATGGTCAGTTTCACGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACCAGAATTGCTGAAGTAAATTGCAAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATATCGAACGGGTTACGGCTGTCGGTGTAACT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	ATATTTTGGCAACTCGTCGTACATTATCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGCACAACGCCTGGATATCCGCCCATCGGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTTTGTGGTAAATATGGAATCGATTAACCCC
GTGTTCCCCGCGCCAGCGGGGATAAACAC

>CP025278|2|2|976287-976986|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGGTGATTTTAATGATGTGCTGACTACCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTTCTACAGTAAGGTTTACAGCCTGAGCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTACGGAAATTTGTGTCAGATATTGCCGGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCCCACAGTTCGTCGTGAATTGCGCAGGATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTCTCAATAAATTTTCCCGGCTGCCGGATCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTGGGACCATTCCAATGGTCAGTTTCACGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACCAGAATTGCTGAAGTAAATTGCAAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATATCGAACGGGTTACGGCTGTCGGTGTAACT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	ATATTTTGGCAACTCGTCGTACATTATCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGCACAACGCCTGGATATCCGCCCATCGGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTTTGTGGTAAATATGGAATCGATTAACCCC
GTGTTCCCCGCGCCAGCGGGGATAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
CP025278.1\|QBJ50408.1\|972516_972759_-\|hypothetical-protein	unknown	unknown	unknown
CP025278.1\|QBJ50414.1\|980641_981247_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
CP025278.1\|QBJ50403.1\|966621_967419_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
CP025278.1\|QBJ54277.1\|967799_967970_+\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	unknown
CP025278.1\|QBJ50412.1\|978297_979206_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP025278.1\|QBJ50410.1\|973909_974134_-\|hypothetical-protein	unknown	unknown	unknown
CP025278.1\|QBJ50415.1\|981264_981621_+\|DUF3561-domain-containing-protein	unknown	unknown	gnl\|CDD\|371891
CP025278.1\|QBJ50409.1\|972840_973794_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
CP025278.1\|QBJ50402.1\|964245_964917_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP025278.1\|QBJ50405.1\|968306_970106_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
CP025278.1\|QBJ50419.1\|983327_984377_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
CP025278.1\|QBJ50418.1\|982851_983331_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP025278.1\|QBJ50406.1\|970105_971818_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
CP025278.1\|QBJ50407.1\|971893_972628_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP025278.1\|QBJ50404.1\|967508_967871_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP025278.1\|QBJ50417.1\|982141_982852_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
CP025278.1\|QBJ50413.1\|979215_980655_+\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235349
CP025278.1\|QBJ50420.1\|984357_985119_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
CP025278.1\|QBJ50411.1\|977000_978047_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP025278.1\|QBJ50416.1\|981811_982123_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156

Protein	Function_ID	Function_description	E-value
CP025278.1\|QBJ50414.1\|980641_981247_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
CP025278.1\|QBJ50403.1\|966621_967419_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	9.9681e-103
CP025278.1\|QBJ50417.1\|982141_982852_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.24126e-119
CP025278.1\|QBJ50412.1\|978297_979206_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP025278.1\|QBJ50415.1\|981264_981621_+\|DUF3561-domain-containing-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49
CP025278.1\|QBJ50409.1\|972840_973794_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP025278.1\|QBJ50402.1\|964245_964917_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
CP025278.1\|QBJ50405.1\|968306_970106_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP025278.1\|QBJ50419.1\|983327_984377_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
CP025278.1\|QBJ50418.1\|982851_983331_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
CP025278.1\|QBJ50406.1\|970105_971818_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP025278.1\|QBJ50407.1\|971893_972628_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	3.66931e-138
CP025278.1\|QBJ50404.1\|967508_967871_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
CP025278.1\|QBJ50413.1\|979215_980655_+\|sulfate-adenylyltransferase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
CP025278.1\|QBJ50420.1\|984357_985119_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	7.64916e-147
CP025278.1\|QBJ50411.1\|977000_978047_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP025278.1\|QBJ50416.1\|981811_982123_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64

>CP025278.1|QBJ50410.1|973909_974134_-|hypothetical-protein
MLTQLYIFFRNIYPTNNYYKFFRSFLLEEAIKEASSNAPLHKPKFKKTTICGESSTFCLNYRHHKGLPTINVLY
>CP025278.1|QBJ50409.1|972840_973794_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDTVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>CP025278.1|QBJ50408.1|972516_972759_-|hypothetical-protein
MLLGTHSLAAFKQLELFWVYNQFKIRLPAGFFIAASIIIPRKDNYPSCSPHSRFSPKNRVSSSAMPGSHLRVVCVSPTDR
>CP025278.1|QBJ50407.1|971893_972628_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAYLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP025278.1|QBJ50406.1|970105_971818_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYQENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>CP025278.1|QBJ50405.1|968306_970106_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLTDTAFAVFGLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNYIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>CP025278.1|QBJ54277.1|967799_967970_+|6-pyruvoyl-tetrahydrobiopterin-synthase
MPFRHVRQAVSGFKGEIFIQRGGHDELSGNKKTAVGYRKAHFLSLTKTILRLVTGN
>CP025278.1|QBJ50404.1|967508_967871_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>CP025278.1|QBJ50403.1|966621_967419_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSREVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>CP025278.1|QBJ50402.1|964245_964917_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>CP025278.1|QBJ50411.1|977000_978047_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGIDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>CP025278.1|QBJ50412.1|978297_979206_+|sulfate-adenylyltransferase-subunit-2
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>CP025278.1|QBJ50413.1|979215_980655_+|sulfate-adenylyltransferase
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLTPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELNERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>CP025278.1|QBJ50414.1|980641_981247_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>CP025278.1|QBJ50415.1|981264_981621_+|DUF3561-domain-containing-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>CP025278.1|QBJ50416.1|981811_982123_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>CP025278.1|QBJ50417.1|982141_982852_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>CP025278.1|QBJ50418.1|982851_983331_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>CP025278.1|QBJ50419.1|983327_984377_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>CP025278.1|QBJ50420.1|984357_985119_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQIKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP025278_1	1.4\|965427\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965427-965458	32	CP025278.1	1530782-1530813	1	0.969

1. spacer 1.4|965427|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to position: 1530782-1530813, mismatch: 1, identity: 0.969

gcagattggtatctggtacgacgactgccgcc	CRISPR spacer
gcagattggtatccggtacgacgactgccgcc	Protospacer
*************.******************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP025278_2	2.10\|976865\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	976865-976896	32	NZ_CP044185	Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403	35345-35376	0	1.0
CP025278_3	3.1\|2757156\|36\|CP025278\|CRISPRCasFinder	2757156-2757191	36	NC_019769	Enterobacteria phage HK542, complete genome	29180-29215	0	1.0
CP025278_2	2.10\|976865\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	976865-976896	32	NZ_CP029990	Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 plasmid pSA20121591.1, complete sequence	95164-95195	1	0.969
CP025278_2	2.10\|976865\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	976865-976896	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	9403-9434	1	0.969
CP025278_2	2.10\|976865\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	976865-976896	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	39737-39768	1	0.969
CP025278_2	2.10\|976865\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	976865-976896	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	113376-113407	1	0.969
CP025278_3	3.1\|2757156\|36\|CP025278\|CRISPRCasFinder	2757156-2757191	36	NC_016160	Escherichia phage HK75, complete genome	28597-28632	1	0.972
CP025278_3	3.1\|2757156\|36\|CP025278\|CRISPRCasFinder	2757156-2757191	36	NC_019705	Enterobacteria phage mEpX2, complete genome	29051-29086	1	0.972
CP025278_3	3.1\|2757156\|36\|CP025278\|CRISPRCasFinder	2757156-2757191	36	KY979108	Escherichia phage ECP1, complete genome	432-467	1	0.972
CP025278_3	3.1\|2757156\|36\|CP025278\|CRISPRCasFinder	2757156-2757191	36	NC_019719	Enterobacteria phage HK633, complete genome	31745-31780	1	0.972
CP025278_3	3.1\|2757156\|36\|CP025278\|CRISPRCasFinder	2757156-2757191	36	JF974339	Enterobacteria phage IME10, complete genome	9728-9763	1	0.972
CP025278_3	3.1\|2757156\|36\|CP025278\|CRISPRCasFinder	2757156-2757191	36	NC_005344	Enterobacteria phage Sf6, complete genome	28415-28450	1	0.972
CP025278_3	3.1\|2757156\|36\|CP025278\|CRISPRCasFinder	2757156-2757191	36	NC_019715	Enterobacterial phage mEp234, complete genome	30413-30448	2	0.944
CP025278_3	3.1\|2757156\|36\|CP025278\|CRISPRCasFinder	2757156-2757191	36	NC_019711	Enterobacteria phage HK629, complete genome	37174-37209	2	0.944
CP025278_3	3.1\|2757156\|36\|CP025278\|CRISPRCasFinder	2757156-2757191	36	NC_019768	Enterobacteria phage HK106, complete genome	32709-32744	2	0.944
CP025278_1	1.11\|965854\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965854-965885	32	NZ_CP009113	Rhodococcus opacus strain 1CP plasmid pR1CP2, complete sequence	57554-57585	6	0.812
CP025278_2	2.10\|976865\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	976865-976896	32	NZ_CP040720	Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence	270963-270994	7	0.781
CP025278_1	1.7\|965610\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965610-965641	32	NC_024970	Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence	189898-189929	8	0.75
CP025278_1	1.7\|965610\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965610-965641	32	NZ_KJ396772	Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence	189898-189929	8	0.75
CP025278_1	1.7\|965610\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965610-965641	32	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1789627-1789658	8	0.75
CP025278_1	1.7\|965610\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965610-965641	32	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	1806317-1806348	8	0.75
CP025278_1	1.7\|965610\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965610-965641	32	NZ_CP024986	Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence	51148-51179	8	0.75
CP025278_1	1.7\|965610\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965610-965641	32	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	212687-212718	8	0.75
CP025278_1	1.7\|965610\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965610-965641	32	NC_017805	Deinococcus gobiensis I-0 plasmid P1, complete sequence	382523-382554	8	0.75
CP025278_1	1.7\|965610\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965610-965641	32	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	212685-212716	8	0.75
CP025278_1	1.7\|965610\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965610-965641	32	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	1769551-1769582	8	0.75
CP025278_1	1.7\|965610\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965610-965641	32	MN536027	Pseudomonas phage vB_Pae-SS2019XII, complete genome	14176-14207	8	0.75
CP025278_1	1.19\|966342\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	966342-966373	32	MH622910	Caudovirales sp. isolate ctdb_3, complete genome	4473-4504	8	0.75
CP025278_1	1.5\|965488\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965488-965519	32	NZ_CP014361	Methylomonas sp. DH-1 plasmid, complete sequence	141473-141504	9	0.719
CP025278_1	1.7\|965610\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965610-965641	32	NZ_CP049908	Hymenobacter sp. HDW8 plasmid p_unnamed1, complete sequence	276209-276240	9	0.719
CP025278_1	1.7\|965610\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965610-965641	32	NZ_CP013436	Burkholderia latens strain AU17928 isolate AU17928 plasmid pAU17928, complete sequence	20088-20119	9	0.719
CP025278_1	1.7\|965610\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965610-965641	32	NZ_CP049813	Monaibacterium sp. ALG8 plasmid unnamed2, complete sequence	69714-69745	9	0.719
CP025278_1	1.11\|965854\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965854-965885	32	MN096355	Mycobacterium phage Purky, complete genome	25716-25747	9	0.719
CP025278_1	1.12\|965915\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965915-965946	32	MN694197	Marine virus AFVG_250M303, complete genome	6755-6786	9	0.719
CP025278_2	2.2\|976377\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	976377-976408	32	AP018321	Nostoc sp. HK-01 plasmid plasmid3 DNA, complete genome	46531-46562	9	0.719
CP025278_2	2.7\|976682\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	976682-976713	32	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	63580-63611	9	0.719
CP025278_2	2.7\|976682\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	976682-976713	32	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	2378875-2378906	9	0.719
CP025278_1	1.7\|965610\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965610-965641	32	NZ_CP029777	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence	171558-171589	10	0.688
CP025278_1	1.12\|965915\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965915-965946	32	KX119175	Helicobacter phage Pt22899G, complete genome	5088-5119	10	0.688
CP025278_1	1.12\|965915\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965915-965946	32	KX119175	Helicobacter phage Pt22899G, complete genome	16950-16981	10	0.688
CP025278_1	1.12\|965915\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965915-965946	32	JF734911	Helicobacter phage phiHP33, complete genome	19807-19838	10	0.688
CP025278_1	1.12\|965915\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965915-965946	32	KX119200	Helicobacter phage FrMEG235U, complete genome	14594-14625	10	0.688
CP025278_1	1.12\|965915\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965915-965946	32	KX119200	Helicobacter phage FrMEG235U, complete genome	19690-19721	10	0.688
CP025278_1	1.12\|965915\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965915-965946	32	KX119201	Helicobacter phage FrANT170U, complete genome	14594-14625	10	0.688
CP025278_1	1.12\|965915\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965915-965946	32	KX119201	Helicobacter phage FrANT170U, complete genome	19690-19721	10	0.688
CP025278_1	1.12\|965915\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	965915-965946	32	KX119179	Helicobacter phage Pt5303G mobile element protein and transposase genes, complete cds	1261-1292	10	0.688
CP025278_1	1.14\|966037\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	966037-966068	32	NZ_CP031899	Escherichia coli O113:H21 strain FWSEC0010 plasmid unnamed1, complete sequence	76272-76303	10	0.688
CP025278_1	1.14\|966037\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	966037-966068	32	NZ_KM085450	Escherichia coli O104:H21 strain 94-3024 plasmid pO104_H21, complete sequence	141990-142021	10	0.688
CP025278_1	1.14\|966037\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	966037-966068	32	NZ_CP009107	Escherichia coli strain 94-3024 plasmid pO104_H21, complete sequence	141989-142020	10	0.688
CP025278_1	1.14\|966037\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	966037-966068	32	NZ_CP028382	Escherichia coli strain RM10466 plasmid pRM10466-1, complete sequence	155197-155228	10	0.688
CP025278_1	1.14\|966037\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	966037-966068	32	NZ_CP027343	Escherichia coli strain 2014C-4587 plasmid unnamed, complete sequence	103401-103432	10	0.688
CP025278_1	1.14\|966037\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	966037-966068	32	NZ_CP027311	Escherichia coli strain 2014C-4135 plasmid unnamed, complete sequence	50904-50935	10	0.688
CP025278_1	1.14\|966037\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	966037-966068	32	NZ_CP027441	Escherichia coli strain 2012C-4502 plasmid unnamed, complete sequence	97903-97934	10	0.688
CP025278_1	1.14\|966037\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	966037-966068	32	NZ_CP027585	Escherichia coli strain 00-3076 plasmid unnamed, complete sequence	13352-13383	10	0.688
CP025278_1	1.14\|966037\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	966037-966068	32	NZ_CP027370	Escherichia coli strain 2014C-3307 plasmid unnamed2	109572-109603	10	0.688
CP025278_1	1.14\|966037\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	966037-966068	32	NZ_CP027453	Escherichia coli strain 2014C-3338 plasmid unnamed, complete sequence	79387-79418	10	0.688
CP025278_1	1.14\|966037\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	966037-966068	32	NZ_CP027451	Escherichia coli strain 2014C-3097 plasmid unnamed2, complete sequence	10648-10679	10	0.688
CP025278_1	1.14\|966037\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	966037-966068	32	NZ_CP027372	Escherichia coli strain 2015C-3905 plasmid unnamed	102888-102919	10	0.688
CP025278_1	1.14\|966037\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	966037-966068	32	NZ_CP028121	Escherichia coli O43 str. RM10042 plasmid pRM10042-2, complete sequence	49990-50021	10	0.688
CP025278_1	1.14\|966037\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	966037-966068	32	NC_007365	Escherichia coli EH41 plasmid pO113, complete sequence	160071-160102	10	0.688
CP025278_1	1.14\|966037\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	966037-966068	32	NZ_CP023542	Escherichia coli O104:H21 str. CFSAN002236 strain ATCC BAA-178 plasmid pO104_H21, complete sequence	141994-142025	10	0.688
CP025278_1	1.14\|966037\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	966037-966068	32	NZ_CP010192	Escherichia coli strain M8 plasmid A, complete genome	74522-74553	10	0.688
CP025278_1	1.14\|966037\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	966037-966068	32	NZ_CP023164	Escherichia coli O22:H8 strain RM10809-3 plasmid pRM10809-3, complete sequence	35202-35233	10	0.688
CP025278_1	1.19\|966342\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	966342-966373	32	NZ_CP043499	Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence	1409535-1409566	10	0.688
CP025278_2	2.2\|976377\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	976377-976408	32	MG592456	Vibrio phage 1.081.O._10N.286.52.C2, partial genome	229928-229959	10	0.688
CP025278_2	2.8\|976743\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	976743-976774	32	NZ_CP042332	Bosea sp. F3-2 plasmid pB32-1, complete sequence	318607-318638	10	0.688
CP025278_1	1.15\|966098\|32\|CP025278\|PILER-CR,CRISPRCasFinder,CRT	966098-966129	32	NZ_CP015094	Pelagibaca abyssi strain JLT2014 plasmid pPABY6, complete sequence	53594-53625	11	0.656

1. spacer 2.10|976865|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 0, identity: 1.0

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgcacaacgcctggatatccgcccatcggcc	Protospacer
********************************

2. spacer 3.1|2757156|36|CP025278|CRISPRCasFinder matches to NC_019769 (Enterobacteria phage HK542, complete genome) position: , mismatch: 0, identity: 1.0

ctccgctgagagccgcaccattactggtgtttgcgt	CRISPR spacer
ctccgctgagagccgcaccattactggtgtttgcgt	Protospacer
************************************

3. spacer 2.10|976865|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029990 (Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 plasmid pSA20121591.1, complete sequence) position: , mismatch: 1, identity: 0.969

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgcacaacgcctggatattcgcccatcggcc	Protospacer
*******************.************

4. spacer 2.10|976865|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgcacaacgcctggatattcgcccatcggcc	Protospacer
*******************.************

5. spacer 2.10|976865|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgcacaacgcctggatattcgcccatcggcc	Protospacer
*******************.************

6. spacer 2.10|976865|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgcacaacgcctggatattcgcccatcggcc	Protospacer
*******************.************

7. spacer 3.1|2757156|36|CP025278|CRISPRCasFinder matches to NC_016160 (Escherichia phage HK75, complete genome) position: , mismatch: 1, identity: 0.972

ctccgctgagagccgcaccattactggtgtttgcgt	CRISPR spacer
ctccgctgagagccgcgccattactggtgtttgcgt	Protospacer
****************.*******************

8. spacer 3.1|2757156|36|CP025278|CRISPRCasFinder matches to NC_019705 (Enterobacteria phage mEpX2, complete genome) position: , mismatch: 1, identity: 0.972

ctccgctgagagccgcaccattactggtgtttgcgt	CRISPR spacer
ctccgctgagagccgcgccattactggtgtttgcgt	Protospacer
****************.*******************

9. spacer 3.1|2757156|36|CP025278|CRISPRCasFinder matches to KY979108 (Escherichia phage ECP1, complete genome) position: , mismatch: 1, identity: 0.972

ctccgctgagagccgcaccattactggtgtttgcgt	CRISPR spacer
ctccgctgagagccgcgccattactggtgtttgcgt	Protospacer
****************.*******************

10. spacer 3.1|2757156|36|CP025278|CRISPRCasFinder matches to NC_019719 (Enterobacteria phage HK633, complete genome) position: , mismatch: 1, identity: 0.972

ctccgctgagagccgcaccattactggtgtttgcgt	CRISPR spacer
ctccgctgagagccgcgccattactggtgtttgcgt	Protospacer
****************.*******************

11. spacer 3.1|2757156|36|CP025278|CRISPRCasFinder matches to JF974339 (Enterobacteria phage IME10, complete genome) position: , mismatch: 1, identity: 0.972

ctccgctgagagccgcaccattactggtgtttgcgt	CRISPR spacer
ctccgctgagagccgcgccattactggtgtttgcgt	Protospacer
****************.*******************

12. spacer 3.1|2757156|36|CP025278|CRISPRCasFinder matches to NC_005344 (Enterobacteria phage Sf6, complete genome) position: , mismatch: 1, identity: 0.972

ctccgctgagagccgcaccattactggtgtttgcgt	CRISPR spacer
ctccgctgagagccgcgccattactggtgtttgcgt	Protospacer
****************.*******************

13. spacer 3.1|2757156|36|CP025278|CRISPRCasFinder matches to NC_019715 (Enterobacterial phage mEp234, complete genome) position: , mismatch: 2, identity: 0.944

ctccgctgagagccgcaccattactggtgtttgcgt	CRISPR spacer
ctccgctgagatccgcgccattactggtgtttgcgt	Protospacer
*********** ****.*******************

14. spacer 3.1|2757156|36|CP025278|CRISPRCasFinder matches to NC_019711 (Enterobacteria phage HK629, complete genome) position: , mismatch: 2, identity: 0.944

ctccgctgagagccgcaccattactggtgtttgcgt	CRISPR spacer
ctccgctgagagacgcgccattactggtgtttgcgt	Protospacer
************ ***.*******************

15. spacer 3.1|2757156|36|CP025278|CRISPRCasFinder matches to NC_019768 (Enterobacteria phage HK106, complete genome) position: , mismatch: 2, identity: 0.944

ctccgctgagagccgcaccattactggtgtttgcgt	CRISPR spacer
ctccgctgagatccgcgccattactggtgtttgcgt	Protospacer
*********** ****.*******************

16. spacer 1.11|965854|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009113 (Rhodococcus opacus strain 1CP plasmid pR1CP2, complete sequence) position: , mismatch: 6, identity: 0.812

gcgctgaccatgattgcagtcagg--gtcggcat	CRISPR spacer
tcgctgaccatgattgcagccgggtcgtcggg--	Protospacer
 ******************.*.**  *****

17. spacer 2.10|976865|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040720 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgagaaacgcctggatctccgcccaccgccg	Protospacer
*** . *********** ********.** *

18. spacer 1.7|965610|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NC_024970 (Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 8, identity: 0.75

cgcaggcgctggacgcgctgcacagacagtcc--	CRISPR spacer
cgcgggcgctcgacgcgctgcac--gtggccctg	Protospacer
***.****** ************  ...*.**

19. spacer 1.7|965610|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KJ396772 (Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 8, identity: 0.75

cgcaggcgctggacgcgctgcacagacagtcc--	CRISPR spacer
cgcgggcgctcgacgcgctgcac--gtggccctg	Protospacer
***.****** ************  ...*.**

20. spacer 1.7|965610|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cgcaggcgctggacgcgctgcacagacagtcc	CRISPR spacer
cgcagtcgctcgacgcgctgcaccgcgtggcg	Protospacer
***** **** ************ *   * *

21. spacer 1.7|965610|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cgcaggcgctggacgcgctgcacagacagtcc	CRISPR spacer
cgcagtcgctcgacgcgctgcaccgcgtggcg	Protospacer
***** **** ************ *   * *

22. spacer 1.7|965610|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024986 (Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence) position: , mismatch: 8, identity: 0.75

cgcaggcgctggacgcgctgcacagacagtcc--	CRISPR spacer
cgcgggcgctcgacgcgctgcac--gtggccctg	Protospacer
***.****** ************  ...*.**

23. spacer 1.7|965610|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

cgcaggcgctggacgcgctgcacagacagtcc	CRISPR spacer
cgcagtcgctcgacgcgctgcaccgcgtggcg	Protospacer
***** **** ************ *   * *

24. spacer 1.7|965610|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NC_017805 (Deinococcus gobiensis I-0 plasmid P1, complete sequence) position: , mismatch: 8, identity: 0.75

cgcaggcgctggacgcgctgcacagacagtcc----	CRISPR spacer
cgcaggcgctggccgagctgc----acgatccagag	Protospacer
************ ** *****    **..***

25. spacer 1.7|965610|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cgcaggcgctggacgcgctgcacagacagtcc	CRISPR spacer
cgcagtcgctcgacgcgctgcaccgcgtggcg	Protospacer
***** **** ************ *   * *

26. spacer 1.7|965610|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

cgcaggcgctggacgcgctgcacagacagtcc	CRISPR spacer
cgcagtcgctcgacgcgctgcaccgcgtggcg	Protospacer
***** **** ************ *   * *

27. spacer 1.7|965610|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to MN536027 (Pseudomonas phage vB_Pae-SS2019XII, complete genome) position: , mismatch: 8, identity: 0.75

cgcaggcgctggacgcgctgcacagacagtcc	CRISPR spacer
tccaggcgctggaggcgctgcgcagcaagagc	Protospacer
. *********** *******.***  **  *

28. spacer 1.19|966342|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to MH622910 (Caudovirales sp. isolate ctdb_3, complete genome) position: , mismatch: 8, identity: 0.75

---aaacaccaacattacggcacgcaagaggttat	CRISPR spacer
ttcaagcgtcag---tacggcacgcaagaagttat	Protospacer
   **.*..**.   **************.*****

29. spacer 1.5|965488|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014361 (Methylomonas sp. DH-1 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

actgttaaaatgcttcaggacggtgaagtaaa	CRISPR spacer
caagcgaaaatgcttcaggatggtgaaatatg	Protospacer
   *. **************.******.** .

30. spacer 1.7|965610|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049908 (Hymenobacter sp. HDW8 plasmid p_unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cgcaggcgctggacgcgctgcacagacagtcc	CRISPR spacer
cgcgggcgctggacgcgccgcacaagaccttt	Protospacer
***.**************.*****..   *..

31. spacer 1.7|965610|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013436 (Burkholderia latens strain AU17928 isolate AU17928 plasmid pAU17928, complete sequence) position: , mismatch: 9, identity: 0.719

cgcaggcgctggacgcgctgcacagacagtcc	CRISPR spacer
cgcaggcgctggagacgctgcacgatcgaaca	Protospacer
************* .********.. *.. *

32. spacer 1.7|965610|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049813 (Monaibacterium sp. ALG8 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

cgcaggcgctggacgcgctgcacagacagtcc	CRISPR spacer
tgcaggccctgaacgcgctgcacatctatcac	Protospacer
.****** ***.************  .* . *

33. spacer 1.11|965854|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to MN096355 (Mycobacterium phage Purky, complete genome) position: , mismatch: 9, identity: 0.719

gcgctgaccatgattgcagtcagggtcggcat	CRISPR spacer
ctggctgccatgatcgcagtcatggtcggcct	Protospacer
 .* . .*******.******* ******* *

34. spacer 1.12|965915|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to MN694197 (Marine virus AFVG_250M303, complete genome) position: , mismatch: 9, identity: 0.719

ggggaatgatgaaacgaattagtaaaaacaaa	CRISPR spacer
aatagggaatgaaacgtattagtaaaaacaaa	Protospacer
.. ... .******** ***************

35. spacer 2.2|976377|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to AP018321 (Nostoc sp. HK-01 plasmid plasmid3 DNA, complete genome) position: , mismatch: 9, identity: 0.719

gcgttctacagtaaggtttacagcctgagcaa	CRISPR spacer
tgcctattcagtaagggttacagccttagcat	Protospacer
   .* * ******** ********* ****

36. spacer 2.7|976682|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 9, identity: 0.719

aaaccagaattgctgaagtaaattgcaaaaga	CRISPR spacer
aaacaagatttgctgaagtaaatttagcattt	Protospacer
**** *** ***************  . *

37. spacer 2.7|976682|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

aaaccagaattgctgaagtaaattgcaaaaga	CRISPR spacer
acgggcgaattgctgaaggaaatcgcaaaaat	Protospacer
* .   ************ ****.******.

38. spacer 1.7|965610|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

cgcaggcgctggacgcgctgcacagacagtcc	CRISPR spacer
gtcaggcgctgcacgccctgcacagccgcgag	Protospacer
  ********* **** ******** *.

39. spacer 1.12|965915|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to KX119175 (Helicobacter phage Pt22899G, complete genome) position: , mismatch: 10, identity: 0.688

ggggaatgatgaaacgaattagtaaaaacaaa	CRISPR spacer
tgcctttgattaaacgacttagtaaaaacctt	Protospacer
 *    **** ****** ***********

40. spacer 1.12|965915|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to KX119175 (Helicobacter phage Pt22899G, complete genome) position: , mismatch: 10, identity: 0.688

ggggaatgatgaaacgaattagtaaaaacaaa	CRISPR spacer
tgcctttgattaaacgacttagtaaaaacctt	Protospacer
 *    **** ****** ***********

41. spacer 1.12|965915|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to JF734911 (Helicobacter phage phiHP33, complete genome) position: , mismatch: 10, identity: 0.688

ggggaatgatgaaacgaattagtaaaaacaaa	CRISPR spacer
tgcctttgattaaacgacttagtaaaaacctt	Protospacer
 *    **** ****** ***********

42. spacer 1.12|965915|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to KX119200 (Helicobacter phage FrMEG235U, complete genome) position: , mismatch: 10, identity: 0.688

ggggaatgatgaaacgaattagtaaaaacaaa	CRISPR spacer
tgcctttgattaaacgacttagtaaaaacctt	Protospacer
 *    **** ****** ***********

43. spacer 1.12|965915|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to KX119200 (Helicobacter phage FrMEG235U, complete genome) position: , mismatch: 10, identity: 0.688

ggggaatgatgaaacgaattagtaaaaacaaa	CRISPR spacer
tgcctttgattaaacgacttagtaaaaacctt	Protospacer
 *    **** ****** ***********

44. spacer 1.12|965915|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to KX119201 (Helicobacter phage FrANT170U, complete genome) position: , mismatch: 10, identity: 0.688

ggggaatgatgaaacgaattagtaaaaacaaa	CRISPR spacer
tgcctttgattaaacgacttagtaaaaacctt	Protospacer
 *    **** ****** ***********

45. spacer 1.12|965915|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to KX119201 (Helicobacter phage FrANT170U, complete genome) position: , mismatch: 10, identity: 0.688

ggggaatgatgaaacgaattagtaaaaacaaa	CRISPR spacer
tgcctttgattaaacgacttagtaaaaacctt	Protospacer
 *    **** ****** ***********

46. spacer 1.12|965915|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to KX119179 (Helicobacter phage Pt5303G mobile element protein and transposase genes, complete cds) position: , mismatch: 10, identity: 0.688

ggggaatgatgaaacgaattagtaaaaacaaa	CRISPR spacer
tgcctttgattaaacgacttagtaaaaacctt	Protospacer
 *    **** ****** ***********

47. spacer 1.14|966037|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031899 (Escherichia coli O113:H21 strain FWSEC0010 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

48. spacer 1.14|966037|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KM085450 (Escherichia coli O104:H21 strain 94-3024 plasmid pO104_H21, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

49. spacer 1.14|966037|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009107 (Escherichia coli strain 94-3024 plasmid pO104_H21, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

50. spacer 1.14|966037|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028382 (Escherichia coli strain RM10466 plasmid pRM10466-1, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

51. spacer 1.14|966037|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027343 (Escherichia coli strain 2014C-4587 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

52. spacer 1.14|966037|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027311 (Escherichia coli strain 2014C-4135 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

53. spacer 1.14|966037|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027441 (Escherichia coli strain 2012C-4502 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

54. spacer 1.14|966037|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027585 (Escherichia coli strain 00-3076 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

55. spacer 1.14|966037|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027370 (Escherichia coli strain 2014C-3307 plasmid unnamed2) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

56. spacer 1.14|966037|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027453 (Escherichia coli strain 2014C-3338 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

57. spacer 1.14|966037|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027451 (Escherichia coli strain 2014C-3097 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

58. spacer 1.14|966037|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027372 (Escherichia coli strain 2015C-3905 plasmid unnamed) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

59. spacer 1.14|966037|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028121 (Escherichia coli O43 str. RM10042 plasmid pRM10042-2, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

60. spacer 1.14|966037|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NC_007365 (Escherichia coli EH41 plasmid pO113, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

61. spacer 1.14|966037|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023542 (Escherichia coli O104:H21 str. CFSAN002236 strain ATCC BAA-178 plasmid pO104_H21, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

62. spacer 1.14|966037|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010192 (Escherichia coli strain M8 plasmid A, complete genome) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

63. spacer 1.14|966037|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023164 (Escherichia coli O22:H8 strain RM10809-3 plasmid pRM10809-3, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

64. spacer 1.19|966342|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

aaacaccaacattacggcacgcaagaggttat	CRISPR spacer
gctcaccgacattacggcgcgcaagaaggcgg	Protospacer
.  ****.**********.*******.* ..

65. spacer 2.2|976377|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to MG592456 (Vibrio phage 1.081.O._10N.286.52.C2, partial genome) position: , mismatch: 10, identity: 0.688

gcgttctacagtaaggtttacagcctgagcaa	CRISPR spacer
gaacggctgagtaacgttaacagcctgagcaa	Protospacer
* ..  .  ***** *** *************

66. spacer 2.8|976743|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042332 (Bosea sp. F3-2 plasmid pB32-1, complete sequence) position: , mismatch: 10, identity: 0.688

atatcgaacgggttacggctgtcggtgtaact	CRISPR spacer
tgaccgaccgggtaacggctgtcggtggcgac	Protospacer
  *.*** ***** *************  . .

67. spacer 1.15|966098|32|CP025278|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015094 (Pelagibaca abyssi strain JLT2014 plasmid pPABY6, complete sequence) position: , mismatch: 11, identity: 0.656

ccagtaacgctggcgtgataattttggtcgcc	CRISPR spacer
aagaagccgccggcgtgataattctggtcgat	Protospacer
  .. . ***.************.****** .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1145620 : 1285766

164

Salmonella_phage(52.71%)

tRNA,capsid,integrase,terminase,portal,plate,tail,transposase,lysis,holin,head

attL 1251457:1251492|attR 1282354:1282389

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBJ50581.1\|1145620_1146710_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	6.7e-141	87.7
QBJ50582.1\|1146690_1147802_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	8.4e-06	25.0
QBJ50583.1\|1148424_1148889_-	hypothetical protein	NA	NA	NA	NA
QBJ50584.1\|1148961_1149804_-	hypothetical protein	NA	NA	NA	NA
QBJ50585.1\|1149815_1151516_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
QBJ50586.1\|1151593_1152715_+	hypothetical protein	NA	NA	NA	NA
QBJ50587.1\|1152789_1154202_+	hypothetical protein	NA	NA	NA	NA
QBJ54282.1\|1154549_1155779_-\|integrase	integrase	A0A1B5FPC6	Escherichia_phage	1.0e-214	89.2
QBJ50588.1\|1156105_1157116_-\|integrase	integrase	F1BUN9	Cronobacter_phage	9.5e-174	85.7
QBJ50589.1\|1157115_1157682_-	Repressor protein CI	F1BUN8	Cronobacter_phage	1.1e-65	59.7
QBJ50590.1\|1157827_1158031_+	hypothetical protein	F1BUN7	Cronobacter_phage	1.0e-10	52.0
QBJ50591.1\|1158068_1158572_+	hypothetical protein	F1BUN6	Cronobacter_phage	1.5e-58	71.3
QBJ50592.1\|1158581_1158809_+	hypothetical protein	NA	NA	NA	NA
QBJ50593.1\|1158798_1159224_+	hypothetical protein	F1BUN5	Cronobacter_phage	2.2e-23	49.6
QBJ50594.1\|1159223_1159625_+	hypothetical protein	F1BUN2	Cronobacter_phage	1.4e-48	66.9
QBJ50595.1\|1159692_1159923_+	DUF2732 domain-containing protein	NA	NA	NA	NA
QBJ50596.1\|1159913_1160243_+	DUF3850 domain-containing protein	Q2P9X4	Enterobacteria_phage	2.0e-11	45.2
QBJ50597.1\|1160232_1161066_+	adenine methylase	F1BUN1	Cronobacter_phage	1.6e-105	68.3
QBJ50598.1\|1161062_1163084_+	replication endonuclease	F1BUM9	Cronobacter_phage	1.9e-298	74.9
QBJ50599.1\|1163196_1163415_+	hypothetical protein	E5G6M0	Salmonella_phage	3.6e-06	49.1
QBJ50600.1\|1163388_1163712_-	transcriptional regulator	F1BUM8	Cronobacter_phage	8.0e-50	92.3
QBJ50601.1\|1163708_1164770_-\|portal	phage portal protein	F1BUM7	Cronobacter_phage	6.0e-163	77.1
QBJ50602.1\|1164766_1166542_-\|terminase	terminase	F1BUM5	Cronobacter_phage	7.0e-289	82.6
QBJ50603.1\|1166702_1167506_+\|capsid	phage capsid protein	F1BUM4	Cronobacter_phage	4.1e-79	56.4
QBJ50604.1\|1167567_1168590_+\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	1.1e-158	81.2
QBJ50605.1\|1168593_1169295_+\|terminase	terminase	F1BUM0	Cronobacter_phage	9.4e-88	66.8
QBJ50606.1\|1169340_1169844_+\|head	head completion protein	F1BUL8	Cronobacter_phage	5.2e-64	82.0
QBJ50607.1\|1169840_1170347_+\|tail	phage tail protein	F1BUL7	Cronobacter_phage	5.2e-64	69.8
QBJ50608.1\|1170343_1171051_+	hypothetical protein	F1BUL6	Cronobacter_phage	6.8e-102	76.9
QBJ50609.1\|1171047_1172175_+	DUF2586 domain-containing protein	F1BUL5	Cronobacter_phage	1.9e-175	83.7
QBJ50610.1\|1172171_1172627_+	DUF2597 domain-containing protein	F1BUL4	Cronobacter_phage	1.5e-57	72.2
QBJ50611.1\|1172636_1172930_+\|holin	holin	C7BGD7	Burkholderia_phage	1.3e-14	46.2
QBJ50612.1\|1172926_1173268_+	hypothetical protein	F1BUL3	Cronobacter_phage	2.2e-50	91.1
QBJ50613.1\|1173267_1173600_+	hypothetical protein	F1BUL2	Cronobacter_phage	6.7e-36	70.9
QBJ50614.1\|1173571_1173760_+	hypothetical protein	F1BUL1	Cronobacter_phage	1.1e-22	80.6
QBJ50615.1\|1173746_1174004_+	hypothetical protein	A5X9I7	Aeromonas_virus	3.6e-21	63.4
QBJ50616.1\|1174191_1176162_+\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	9.2e-266	68.8
QBJ50617.1\|1176158_1176488_+	DUF2590 domain-containing protein	F1BUK8	Cronobacter_phage	3.8e-39	72.4
QBJ50618.1\|1176484_1177669_+	hypothetical protein	F1BUK6	Cronobacter_phage	6.7e-179	78.4
QBJ50619.1\|1177655_1178249_+	hypothetical protein	F1BUK5	Cronobacter_phage	1.1e-89	82.1
QBJ50620.1\|1178258_1180364_+\|tail	phage tail protein	S4TP62	Salmonella_phage	8.8e-198	69.0
QBJ54283.1\|1180472_1180931_+\|tail	tail fiber assembly protein	S4TUB9	Salmonella_phage	1.6e-75	93.2
QBJ50621.1\|1180920_1181646_+	hypothetical protein	F1BUK1	Cronobacter_phage	5.5e-67	56.0
QBJ50622.1\|1181617_1182163_+	hypothetical protein	F1BUJ9	Cronobacter_phage	3.2e-59	72.0
QBJ50623.1\|1182162_1183866_+	hypothetical protein	F1BUJ7	Cronobacter_phage	4.9e-223	81.3
QBJ50624.1\|1184546_1185665_+	hypothetical protein	NA	NA	NA	NA
QBJ50625.1\|1187290_1187539_-	hypothetical protein	NA	NA	NA	NA
QBJ50626.1\|1187750_1188797_-	hypothetical protein	NA	NA	NA	NA
QBJ50627.1\|1188786_1189827_-\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	1.7e-189	92.7
QBJ50628.1\|1189830_1190463_-	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	1.6e-65	58.1
QBJ50629.1\|1190579_1190822_+	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	6.8e-38	97.5
QBJ50630.1\|1190854_1191364_+	hypothetical protein	E5G6L3	Salmonella_phage	1.9e-82	93.5
QBJ50631.1\|1191371_1191668_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.4e-21	88.5
QBJ50632.1\|1191785_1192127_+	hypothetical protein	E5G6L5	Salmonella_phage	1.7e-55	98.2
QBJ50633.1\|1192194_1192428_+	DUF2732 domain-containing protein	E5G6L6	Salmonella_phage	8.3e-33	97.4
QBJ50634.1\|1192427_1192655_+	hypothetical protein	E5G6L7	Salmonella_phage	3.5e-36	98.7
QBJ50635.1\|1192651_1193509_+	DNA adenine methylase	E5G6L8	Salmonella_phage	1.9e-162	97.9
QBJ50636.1\|1193505_1195920_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.6
QBJ50637.1\|1196072_1196261_+	hypothetical protein	E5G6M0	Salmonella_phage	1.6e-26	96.8
QBJ50638.1\|1196199_1196505_+	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
QBJ50639.1\|1196564_1197296_+	hypothetical protein	NA	NA	NA	NA
QBJ50640.1\|1197635_1198703_+	hypothetical protein	NA	NA	NA	NA
QBJ54284.1\|1198705_1199020_+	DUF4325 domain-containing protein	NA	NA	NA	NA
QBJ50641.1\|1199019_1199514_+	hypothetical protein	NA	NA	NA	NA
QBJ50642.1\|1199599_1200625_-\|portal	phage portal protein	E5G6M3	Salmonella_phage	1.1e-172	87.9
QBJ50643.1\|1200624_1202391_-	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.5
QBJ50644.1\|1202533_1203367_+\|capsid	capsid protein	A0A1S6KZW9	Salmonella_phage	6.3e-123	90.6
QBJ50645.1\|1203383_1204442_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	2.9e-181	93.4
QBJ50646.1\|1204445_1205096_+	hypothetical protein	E5G6M7	Salmonella_phage	8.7e-112	96.3
QBJ50647.1\|1205191_1205656_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	6.4e-77	89.6
QBJ50648.1\|1205655_1205859_+\|tail	phage tail protein	E5G6M9	Salmonella_phage	1.4e-31	92.5
QBJ50649.1\|1205862_1206078_+	hypothetical protein	E5G6N0	Salmonella_phage	1.8e-26	80.3
QBJ54285.1\|1206097_1206571_+	lysozyme	E5G6N1	Salmonella_phage	3.7e-80	91.0
QBJ50650.1\|1206572_1206950_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	3.9e-16	40.0
QBJ50651.1\|1206946_1207375_+	hypothetical protein	E5G6N2	Salmonella_phage	1.4e-46	75.9
QBJ50652.1\|1207304_1207508_+	hypothetical protein	A0A1S6KZX6	Salmonella_phage	1.0e-23	76.1
QBJ50653.1\|1207470_1207902_+\|tail	phage tail protein	E5G6N3	Salmonella_phage	8.4e-71	92.3
QBJ50654.1\|1207894_1208341_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	6.2e-61	83.6
QBJ50655.1\|1208409_1208988_+\|plate	phage baseplate assembly protein V	A0A1S6KZX7	Salmonella_phage	2.1e-93	85.9
QBJ50656.1\|1208984_1209344_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	9.5e-52	86.6
QBJ50657.1\|1209330_1210239_+\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	1.7e-142	90.1
QBJ50658.1\|1210231_1210837_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.5e-110	92.5
QBJ50659.1\|1210833_1212225_+\|tail	phage tail protein	M1TAS6	Escherichia_phage	2.2e-152	73.6
QBJ50660.1\|1212211_1212409_+	hypothetical protein	NA	NA	NA	NA
QBJ50661.1\|1212377_1212983_-\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	1.2e-86	80.9
QBJ50662.1\|1212982_1213534_-\|tail	phage tail protein	Q9MCR6	Enterobacteria_phage	5.2e-57	67.6
QBJ50663.1\|1213561_1214128_+	DNA-invertase	A0A0F7LA37	Escherichia_phage	3.8e-87	86.8
QBJ50664.1\|1214270_1215443_+\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	2.1e-204	90.3
QBJ50665.1\|1215452_1215968_+\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	2.4e-88	94.2
QBJ50666.1\|1216022_1216325_+\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	5.3e-40	89.0
QBJ50667.1\|1216339_1216459_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.8e-13	87.2
QBJ50668.1\|1216451_1219529_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	69.3
QBJ50669.1\|1219525_1220011_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	4.8e-67	80.6
QBJ50670.1\|1220007_1221108_+	late control protein D	A0A1S6KZZ5	Salmonella_phage	3.4e-177	88.5
QBJ50671.1\|1221176_1221395_+	levansucrase regulator	Q53ZE7	Salmonella_virus	7.5e-28	77.8
QBJ50672.1\|1221421_1221904_-	hypothetical protein	Q19UP0	Mannheimia_phage	1.7e-16	33.1
QBJ54286.1\|1222461_1223625_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
QBJ50673.1\|1223632_1225813_-	type I secretion system permease/ATPase	F2Y302	Organic_Lake_phycodnavirus	1.3e-18	34.0
QBJ50674.1\|1225809_1227219_-	type I secretion protein TolC	NA	NA	NA	NA
QBJ50675.1\|1227283_1238758_-	Ig-like domain repeat protein	NA	NA	NA	NA
QBJ54287.1\|1239377_1239860_-	SsrA-binding protein	W5RAM5	Staphylococcus_phage	5.2e-29	47.4
QBJ50676.1\|1240009_1240486_+	ubiquinone-binding protein	NA	NA	NA	NA
QBJ50677.1\|1240475_1240766_+	RnfH family protein	NA	NA	NA	NA
QBJ50678.1\|1240931_1241270_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
QBJ50679.1\|1241418_1243080_-	DNA repair protein RecN	NA	NA	NA	NA
QBJ54289.1\|1243165_1244044_-	NAD(+) kinase	NA	NA	NA	NA
QBJ54288.1\|1244167_1244758_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
QBJ50680.1\|1244792_1245398_-	cytoplasmic protein	NA	NA	NA	NA
QBJ50681.1\|1245517_1246759_-	magnesium/cobalt efflux protein	NA	NA	NA	NA
QBJ50682.1\|1246823_1247615_-	inner membrane protein YpjD	NA	NA	NA	NA
QBJ50683.1\|1247560_1247857_-	hypothetical protein	NA	NA	NA	NA
QBJ50684.1\|1247780_1249142_+	signal recognition particle protein	NA	NA	NA	NA
QBJ54290.1\|1249455_1249704_+	30S ribosomal protein S16	NA	NA	NA	NA
QBJ50685.1\|1249722_1250271_+	ribosome maturation factor RimM	NA	NA	NA	NA
QBJ50686.1\|1250315_1251083_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
QBJ50687.1\|1251123_1251471_+	50S ribosomal protein L19	NA	NA	NA	NA
1251457:1251492	attL	NA	NA	NA	NA
QBJ50688.1\|1251615_1251834_-	transcriptional regulator	Q37973	Salmonella_virus	1.2e-38	100.0
QBJ50689.1\|1251909_1253079_-	hypothetical protein	A0A0M5M5V5	Salmonella_phage	1.7e-211	97.4
QBJ50690.1\|1253075_1253561_-\|tail	phage tail protein	Q6K1G5	Salmonella_virus	1.0e-85	99.4
QBJ50691.1\|1253575_1256020_-\|tail	phage tail tape measure protein	Q6K1G6	Salmonella_virus	0.0e+00	94.5
QBJ50692.1\|1256012_1256168_-\|tail	GpE family phage tail protein	Q6K1G8	Salmonella_virus	8.8e-23	98.0
QBJ50693.1\|1256164_1256500_-\|tail	phage tail assembly protein	A0A218M4J8	Erwinia_phage	2.6e-51	97.3
QBJ50694.1\|1256562_1257081_-\|tail	phage major tail tube protein	S4TNZ0	Salmonella_phage	1.4e-93	99.4
QBJ50695.1\|1257096_1258275_-\|tail	phage tail protein	S4TRX2	Salmonella_phage	2.9e-222	99.5
QBJ50696.1\|1258409_1258958_-\|tail	tail fiber assembly protein	S4TUB9	Salmonella_phage	9.9e-101	100.0
QBJ50697.1\|1258970_1260947_-\|tail	phage tail protein	S4TP62	Salmonella_phage	0.0e+00	99.2
QBJ50698.1\|1260957_1261488_-\|tail	phage tail protein I	Q6K1H3	Salmonella_virus	1.5e-101	97.2
QBJ50699.1\|1261480_1262389_-\|plate	baseplate assembly protein	Q6K1H4	Salmonella_virus	7.7e-159	98.3
QBJ50700.1\|1262395_1262743_-\|plate	baseplate assembly protein	A0A0M4RE59	Salmonella_phage	1.0e-55	96.5
QBJ50701.1\|1262739_1263381_-\|plate	phage baseplate assembly protein V	Q6K1H6	Salmonella_virus	5.5e-111	96.7
QBJ50702.1\|1263449_1263899_-	phage virion morphogenesis protein	A0A0M3UL83	Salmonella_phage	7.4e-70	94.6
QBJ50703.1\|1263891_1264359_-\|tail	phage tail protein	S4TTA5	Salmonella_phage	1.1e-84	100.0
QBJ50704.1\|1264321_1264495_-\|lysis	phage lysis protein	S4TNY4	Salmonella_phage	2.8e-25	98.2
QBJ50705.1\|1264466_1264880_-	protein lysB	A0A0M4R2N5	Salmonella_phage	1.2e-45	97.8
QBJ50706.1\|1264876_1265374_-	lysozyme	S4TUB1	Salmonella_phage	1.2e-92	99.4
QBJ50707.1\|1265360_1265657_-\|holin	holin	Q6K1I2	Salmonella_virus	5.8e-47	100.0
QBJ50708.1\|1265660_1265864_-\|tail	phage tail protein	A0A0M3ULF4	Salmonella_phage	3.6e-32	100.0
QBJ50709.1\|1265863_1266370_-\|head	head completion/stabilization protein	S4TNY1	Salmonella_phage	2.9e-91	98.8
QBJ50710.1\|1266463_1267213_-\|terminase	terminase	Q6K1I5	Salmonella_virus	1.5e-128	98.4
QBJ50711.1\|1267216_1268284_-\|capsid	phage major capsid protein, P2 family	A0A0M4R4W2	Salmonella_phage	1.2e-198	99.7
QBJ50712.1\|1268360_1269215_-\|capsid	capsid scaffolding protein	S4TP53	Salmonella_phage	3.6e-150	94.7
QBJ50713.1\|1269380_1271153_+	oxidoreductase	S4TT96	Salmonella_phage	0.0e+00	99.8
QBJ50714.1\|1271149_1271896_+	hypothetical protein	Q6K1I9	Salmonella_virus	6.6e-140	96.8
QBJ50715.1\|1271892_1272915_+\|portal	phage portal protein	Q6K1J0	Salmonella_virus	1.5e-198	99.7
QBJ50716.1\|1273049_1273232_-	hypothetical protein	NA	NA	NA	NA
QBJ50717.1\|1273436_1273631_-	hypothetical protein	S4TRZ0	Salmonella_phage	2.5e-19	79.7
QBJ50718.1\|1273764_1273974_-	hypothetical protein	Q6K1F0	Salmonella_virus	2.6e-33	97.1
QBJ50719.1\|1274169_1274403_-	DinI family protein	A0A0M4S6H1	Salmonella_phage	8.0e-36	98.7
QBJ50720.1\|1274406_1274589_-	hypothetical protein	A0A0M5M1G5	Salmonella_phage	4.1e-27	100.0
QBJ50721.1\|1274706_1276929_-	replication endonuclease	A0A0M3ULG0	Salmonella_phage	0.0e+00	95.9
QBJ50722.1\|1276925_1277756_-	hypothetical protein	A0A0M4RCP6	Salmonella_phage	7.1e-159	97.1
QBJ50723.1\|1277759_1278038_-	hypothetical protein	A0A0M4R2Q0	Salmonella_phage	2.0e-41	87.0
QBJ50724.1\|1278038_1278260_-	hypothetical protein	A0A0M4S5Q7	Salmonella_phage	7.1e-34	98.6
QBJ50725.1\|1278259_1278487_-	DUF2732 domain-containing protein	A0A0M3UL87	Salmonella_phage	9.9e-31	97.3
QBJ50726.1\|1278556_1278757_-	hypothetical protein	A0A0M5M7U3	Salmonella_phage	3.0e-31	97.0
QBJ50727.1\|1278743_1278971_-	DUF2724 domain-containing protein	A0A0M4RTI3	Salmonella_phage	1.2e-36	97.3
QBJ50728.1\|1278978_1279488_-	hypothetical protein	Q6K1F8	Salmonella_virus	9.5e-90	98.8
QBJ50729.1\|1279538_1279892_-	Cro/Cl family transcriptional regulator	Q6K1F9	Salmonella_virus	2.3e-58	100.0
QBJ50730.1\|1280005_1280851_+	phage repressor protein CI	Q6K1G0	Salmonella_virus	4.9e-115	73.7
QBJ50731.1\|1280859_1281198_+	DUF2511 domain-containing protein	A0A0M3ULF8	Salmonella_phage	1.4e-41	72.1
QBJ50732.1\|1281222_1282272_+\|integrase	integrase	A0A0M4S6G4	Salmonella_phage	5.4e-188	90.3
QBJ50733.1\|1282524_1283745_-	diguanylate cyclase	A0A2K8I9Y5	Pseudomonas_phage	5.8e-08	36.2
1282354:1282389	attR	NA	NA	NA	NA
QBJ50734.1\|1283737_1284256_-	DUF4154 domain-containing protein	NA	NA	NA	NA
QBJ50735.1\|1284695_1285766_+	3-deoxy-7-phosphoheptulonate synthase	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	2.4e-90	51.8

DBSCAN-SWA_2

1544033 : 1581462

Salmonella_phage(77.19%)

terminase,portal,tail,lysis,coat,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBJ50961.1\|1544033_1544972_+\|protease	outer membrane protease PgtE	NA	NA	NA	NA
QBJ50962.1\|1544993_1545224_-	hypothetical protein	C6ZR23	Salmonella_phage	1.2e-10	81.8
QBJ50963.1\|1545233_1545437_-	hypothetical protein	C6ZR24	Salmonella_phage	4.7e-32	95.5
QBJ50964.1\|1545533_1546169_-	Eac protein	A0A075B8I7	Enterobacteria_phage	6.3e-107	88.2
QBJ50965.1\|1546413_1546680_-	hypothetical protein	A0A1V0E5L9	Salmonella_phage	1.1e-44	96.6
QBJ50966.1\|1547651_1547909_-	hypothetical protein	A0A192Y5W0	Salmonella_phage	5.9e-40	95.3
QBJ50967.1\|1547910_1548543_-	hypothetical protein	A0A1R3Y5T1	Salmonella_virus	2.1e-25	44.5
QBJ50968.1\|1548539_1548950_-	hypothetical protein	A0A1R3Y5S0	Salmonella_virus	5.7e-69	94.1
QBJ50969.1\|1548946_1549117_-	DUF2737 domain-containing protein	A0A220NQV6	Salmonella_phage	6.1e-25	100.0
QBJ50970.1\|1549127_1549421_-	RecBCD nuclease inhibitor	A0A2H4FNA1	Salmonella_phage	6.1e-49	97.9
QBJ50971.1\|1549436_1549985_-	3'-5' exoribonuclease	C6ZR35	Salmonella_phage	1.0e-105	99.5
QBJ50972.1\|1549993_1550500_-	single-stranded DNA-binding protein	C6ZR36	Salmonella_phage	7.3e-82	90.5
QBJ50973.1\|1550500_1551208_-	recombinase	K7PKU3	Enterobacteria_phage	9.4e-120	88.9
QBJ50974.1\|1551216_1551405_-	hypothetical protein	C6ZR38	Salmonella_phage	3.8e-28	98.4
QBJ50975.1\|1551401_1551515_-	host cell division inhibitory peptide Kil	C6ZR39	Salmonella_phage	7.8e-13	100.0
QBJ50976.1\|1551507_1551654_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	C6ZR40	Salmonella_phage	1.5e-19	97.9
QBJ50977.1\|1551880_1552381_-	HNH endonuclease	A5H1L2	Xanthomonas_virus	2.6e-31	44.2
QBJ50978.1\|1552464_1552659_-	restriction endonuclease	E7C9Q6	Salmonella_phage	2.5e-30	100.0
QBJ50979.1\|1552737_1553076_-	hypothetical protein	E7C9Q7	Salmonella_phage	1.0e-55	96.4
QBJ50980.1\|1553427_1554078_-	LexA family transcriptional repressor	B1B6L9	Salmonella_phage	2.1e-121	99.5
QBJ50981.1\|1554158_1554344_+	hypothetical protein	Q5G8T3	Enterobacteria_phage	5.4e-27	100.0
QBJ50982.1\|1554450_1554741_+	hypothetical protein	I6RSP4	Salmonella_phage	2.4e-45	100.0
QBJ50983.1\|1554909_1555758_+	replication protein	C6ZR51	Salmonella_phage	8.5e-152	95.7
QBJ50984.1\|1555868_1557749_+	bifunctional DNA primase/helicase	A0A0M4R313	Salmonella_phage	0.0e+00	99.2
QBJ50985.1\|1557749_1558028_+	hypothetical protein	C6ZR54	Salmonella_phage	1.9e-47	97.8
QBJ50986.1\|1558083_1558539_+	hypothetical protein	C6ZR55	Salmonella_phage	1.8e-76	95.9
QBJ50987.1\|1558535_1558709_+	protein ninD	C6ZR56	Salmonella_phage	5.2e-32	100.0
QBJ50988.1\|1558675_1558852_+	NinE family protein	I6RSQ2	Salmonella_phage	1.8e-27	98.3
QBJ50989.1\|1558854_1559256_+	hypothetical protein	G9L690	Escherichia_phage	2.7e-63	85.0
QBJ50990.1\|1559248_1559425_+	protein ninF	I6S668	Salmonella_phage	3.1e-24	93.0
QBJ50991.1\|1559417_1559636_+	hypothetical protein	S4TUE0	Salmonella_phage	5.6e-23	68.1
QBJ50992.1\|1559636_1559927_+	DUF1364 domain-containing protein	A0A220NQY2	Salmonella_phage	1.7e-51	100.0
QBJ50993.1\|1559923_1560319_+	hypothetical protein	A0A220NQY4	Salmonella_phage	5.5e-69	96.2
QBJ50994.1\|1560315_1560519_+	protein ninH	I6RSQ6	Salmonella_phage	7.2e-33	100.0
QBJ50995.1\|1560499_1560679_+	hypothetical protein	E7C9S6	Salmonella_phage	4.6e-23	96.6
QBJ50996.1\|1560675_1561299_+	antitermination protein	C6ZR62	Salmonella_phage	1.5e-113	99.0
QBJ50997.1\|1561572_1561770_+	hypothetical protein	NA	NA	NA	NA
QBJ50998.1\|1561857_1562376_+	endodeoxyribonuclease	A0A1V0E5R7	Salmonella_phage	5.9e-95	100.0
QBJ50999.1\|1562599_1562872_+	hypothetical protein	A0A1V0E5R8	Salmonella_phage	1.1e-41	100.0
QBJ51000.1\|1562871_1563369_+	lysozyme	A0A1V0E5Q7	Salmonella_phage	1.4e-93	100.0
QBJ51001.1\|1563365_1563833_+\|lysis	lysis protein	A0A1V0E5Q6	Salmonella_phage	3.8e-77	98.7
QBJ51002.1\|1563867_1564092_+	hypothetical protein	A0A1V0E5I0	Salmonella_phage	1.6e-25	88.7
QBJ51003.1\|1564045_1564576_+	hypothetical protein	B8K1H1	Salmonella_phage	5.3e-91	97.2
QBJ51004.1\|1564832_1565075_+	hypothetical protein	A5VW77	Enterobacteria_phage	1.3e-36	100.0
QBJ51005.1\|1565076_1565565_+	hypothetical protein	A0A1B2IBG8	Erwinia_phage	5.1e-16	34.2
QBJ51006.1\|1565570_1566059_+	DNA-packaging protein	A8CGG1	Salmonella_phage	2.9e-88	100.0
QBJ51007.1\|1566036_1567536_+\|terminase	terminase	A0A1R3Y5N2	Salmonella_virus	2.8e-307	100.0
QBJ51008.1\|1567535_1569713_+\|portal	portal protein	I6R968	Salmonella_phage	0.0e+00	98.2
QBJ51009.1\|1569726_1570638_+	scaffolding protein	A0A1R3Y5R6	Salmonella_virus	1.1e-160	99.7
QBJ51010.1\|1570637_1571930_+\|coat	coat protein	Q76H21	Enterobacteria_phage	1.8e-241	99.3
QBJ51011.1\|1571970_1572531_+	hypothetical protein	I6S1J7	Salmonella_phage	7.0e-102	98.4
QBJ51012.1\|1572514_1573015_+	hypothetical protein	I1TEJ0	Salmonella_phage	1.2e-89	98.2
QBJ51013.1\|1572974_1574393_+	hypothetical protein	I1TEJ1	Salmonella_phage	7.3e-273	98.7
QBJ51014.1\|1574396_1575035_+\|tail	phage tail protein	A0A088CPT1	Enterobacteria_phage	3.4e-84	94.8
QBJ51015.1\|1575034_1575490_+	hypothetical protein	E7C9U3	Salmonella_phage	8.8e-87	99.3
QBJ51016.1\|1575492_1576182_+	DNA transfer protein	B9UDK9	Salmonella_phage	5.6e-93	91.7
QBJ54298.1\|1576224_1577562_+	DNA transfer protein	I1TEJ5	Salmonella_phage	7.7e-240	98.0
QBJ51017.1\|1577561_1579628_+	DNA transfer protein	B9UDL1	Salmonella_phage	1.1e-288	81.1
QBJ51018.1\|1579704_1581462_+	hypothetical protein	A0A0M4RD19	Salmonella_phage	1.8e-55	51.6

DBSCAN-SWA_3

1828170 : 1837341

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBJ51245.1\|1828170_1829118_+	ATP-binding protein	G3M9Y6	Bacillus_virus	1.3e-23	31.2
QBJ51246.1\|1829101_1829833_+	ABC transporter permease	NA	NA	NA	NA
QBJ51247.1\|1829813_1829921_-	hypothetical protein	NA	NA	NA	NA
QBJ51248.1\|1829980_1830712_-	transcriptional regulator	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
QBJ51249.1\|1830934_1832620_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
QBJ51250.1\|1832616_1833336_+	DNA-binding response regulator	NA	NA	NA	NA
QBJ51251.1\|1833382_1833850_+	DUF1456 domain-containing protein	Q9EYF4	Enterobacteria_phage	3.0e-74	90.3
QBJ51252.1\|1833906_1834437_-	DUF1307 domain-containing protein	NA	NA	NA	NA
QBJ51253.1\|1834608_1835067_-	lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
QBJ51254.1\|1835307_1837341_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_4

2121372 : 2165711

Salmonella_phage(17.02%)

lysis,tail,integrase,head

attL 2138745:2138759|attR 2170867:2170881

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBJ51528.1\|2121372_2121603_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	8.5e-14	58.8
QBJ51529.1\|2121740_2122115_+	CopC domain-containing protein YobA	NA	NA	NA	NA
QBJ51530.1\|2122115_2122991_+	hypothetical protein	NA	NA	NA	NA
QBJ51531.1\|2123007_2123361_+	DUF2511 domain-containing protein	NA	NA	NA	NA
QBJ51532.1\|2123419_2123539_+	hypothetical protein	NA	NA	NA	NA
QBJ51533.1\|2123744_2124824_-\|integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	1.3e-101	52.8
QBJ51534.1\|2124798_2125077_-	excisionase	A0A2H4J5E1	uncultured_Caudovirales_phage	1.4e-10	37.5
QBJ54317.1\|2125137_2125374_-	hypothetical protein	NA	NA	NA	NA
QBJ51535.1\|2125664_2125850_-	hypothetical protein	A0A0U2QL97	Escherichia_phage	2.9e-12	59.6
QBJ51536.1\|2125896_2126727_-	recombination and repair protein RecT	A0A1P8DTF2	Proteus_phage	2.9e-104	72.0
QBJ51537.1\|2126719_2129410_-	exonuclease VIII	Q9QF34	Lambdoid_phage	9.8e-117	75.6
QBJ51538.1\|2129550_2129886_-	hypothetical protein	NA	NA	NA	NA
QBJ51539.1\|2129960_2130245_-	hypothetical protein	K7PGY4	Enterobacteria_phage	1.7e-08	53.2
QBJ51540.1\|2130664_2130889_-	hypothetical protein	NA	NA	NA	NA
QBJ51541.1\|2131202_2131628_-	transcriptional regulator	K7PH71	Enterobacterial_phage	1.2e-13	56.3
QBJ51542.1\|2131724_2131979_+	XRE family transcriptional regulator	K7PKH4	Enterobacteria_phage	5.3e-17	60.9
QBJ51543.1\|2131965_2132460_+	hypothetical protein	NA	NA	NA	NA
QBJ51544.1\|2132503_2133511_+	DUF1376 domain-containing protein	A0A0U2RT81	Escherichia_phage	2.4e-124	68.1
QBJ51545.1\|2133503_2133965_+	replication protein	A0A0U2JGJ0	Escherichia_phage	7.8e-67	74.8
QBJ51546.1\|2133977_2134373_+	DUF977 domain-containing protein	A0A088CBK9	Shigella_phage	1.7e-17	38.1
QBJ51547.1\|2134369_2134642_+	hypothetical protein	NA	NA	NA	NA
QBJ51548.1\|2134845_2135001_+	type I toxin-antitoxin system hok family toxin	A0A0U2QV81	Escherichia_phage	2.0e-14	82.4
QBJ51549.1\|2135250_2135499_+	hypothetical protein	NA	NA	NA	NA
QBJ51550.1\|2135562_2136162_+	DUF1367 domain-containing protein	A0A0U2RT94	Escherichia_phage	5.0e-98	83.9
QBJ51551.1\|2136158_2136353_+	hypothetical protein	S4TNP0	Salmonella_phage	6.1e-13	61.5
QBJ51552.1\|2136349_2136631_+	hypothetical protein	K7P7Q1	Enterobacteria_phage	1.7e-35	79.1
QBJ51553.1\|2136627_2137182_+	DUF1133 domain-containing protein	A0A0U2S606	Escherichia_phage	2.8e-63	64.6
QBJ51554.1\|2137127_2137385_-	hypothetical protein	NA	NA	NA	NA
QBJ51555.1\|2137427_2137604_+	addiction module toxin, HicA family	A0A0M3LQ86	Mannheimia_phage	1.2e-12	60.3
QBJ51556.1\|2137654_2138062_+	type II toxin-antitoxin system HicB family antitoxin	F1C593	Cronobacter_phage	1.4e-38	63.0
QBJ54318.1\|2138211_2138514_+	alpha/beta hydrolase	NA	NA	NA	NA
QBJ51557.1\|2138491_2139031_+	lysozyme	K7PLY1	Enterobacteria_phage	3.4e-77	71.8
2138745:2138759	attL	NA	NA	NA	NA
QBJ51558.1\|2139131_2139596_+\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	6.3e-56	81.7
QBJ51559.1\|2139821_2140004_+	hypothetical protein	NA	NA	NA	NA
QBJ51560.1\|2140074_2140704_+	hypothetical protein	A0A0M3ULJ9	Salmonella_phage	9.6e-108	98.1
QBJ51561.1\|2140706_2142326_+	TerL protein	A0A0M5M1R6	Salmonella_phage	1.5e-261	81.2
QBJ51562.1\|2142325_2143846_+	DUF1073 domain-containing protein	A0A2R3UAL5	Myoviridae_environmental_samples	3.1e-104	43.9
QBJ51563.1\|2143886_2144576_+\|head	phage head morphogenesis protein	H9C0V1	Aeromonas_phage	4.5e-58	49.6
QBJ51564.1\|2144572_2145919_+	DUF2213 domain-containing protein	A0A219YCD3	Aeromonas_phage	4.2e-68	37.2
QBJ51565.1\|2145920_2146403_+	hypothetical protein	A0A1X9SFC3	Acinetobacter_phage	1.1e-26	48.8
QBJ51566.1\|2146402_2147431_+	DUF2184 domain-containing protein	A0A219YBB0	Aeromonas_phage	2.3e-82	48.7
QBJ51567.1\|2147434_2147782_+	hypothetical protein	H9C0V9	Aeromonas_phage	3.0e-10	40.2
QBJ51568.1\|2147788_2148244_+	DUF4054 domain-containing protein	A0A068CGG9	Acinetobacter_phage	2.4e-15	40.8
QBJ51569.1\|2148237_2148822_+	hypothetical protein	H9C0W2	Aeromonas_phage	3.2e-17	30.6
QBJ51570.1\|2148818_2149184_+	hypothetical protein	A0A077KAW7	Edwardsiella_phage	8.8e-21	39.7
QBJ51571.1\|2149168_2149714_+	hypothetical protein	NA	NA	NA	NA
QBJ51572.1\|2149694_2151179_+	DUF3383 domain-containing protein	A0A077KGV4	Edwardsiella_phage	4.0e-96	41.0
QBJ51573.1\|2151179_2151626_+	hypothetical protein	Q2NPD1	Xanthomonas_phage	4.8e-21	40.4
QBJ51574.1\|2151625_2152030_+	hypothetical protein	H9C0W7	Aeromonas_phage	8.2e-20	44.8
QBJ51575.1\|2152071_2152254_+	transcription elongation factor GreA	NA	NA	NA	NA
QBJ51576.1\|2152237_2154409_+	transglycosylase	A0A0M4REK7	Salmonella_phage	1.4e-49	67.1
QBJ51577.1\|2154405_2155116_+	hypothetical protein	A0A077KGW3	Edwardsiella_phage	5.0e-28	34.6
QBJ51578.1\|2155115_2155418_+	hypothetical protein	A0A077K9U4	Edwardsiella_phage	2.4e-24	50.5
QBJ51579.1\|2155414_2156284_+	hypothetical protein	A0A077KC17	Edwardsiella_phage	9.1e-32	32.7
QBJ51580.1\|2156264_2156942_+	oxidoreductase	A0A077KAY0	Edwardsiella_phage	1.6e-31	36.0
QBJ51581.1\|2156954_2157311_+	hypothetical protein	A0A077KCA1	Edwardsiella_phage	1.6e-19	49.1
QBJ51582.1\|2157307_2158549_+	hypothetical protein	A0A077KGW9	Edwardsiella_phage	9.1e-102	49.9
QBJ51583.1\|2158550_2159153_+	DUF2612 domain-containing protein	H9C0Y0	Aeromonas_phage	5.9e-30	43.2
QBJ51584.1\|2159142_2160594_+	short-chain dehydrogenase	E5G6P0	Salmonella_phage	7.3e-42	70.2
QBJ51585.1\|2160590_2161415_+\|tail	phage tail protein	A0A0M4QWS3	Salmonella_phage	1.2e-150	93.4
QBJ51586.1\|2161404_2161974_+\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	4.2e-94	88.4
QBJ51587.1\|2162123_2162978_+	protein YibB	NA	NA	NA	NA
QBJ51588.1\|2163046_2164588_-	hypothetical protein	NA	NA	NA	NA
QBJ51589.1\|2165351_2165711_-\|integrase	integrase	K7PHK0	Enterobacteria_phage	8.4e-16	39.3
2170867:2170881	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2719905 : 2768239

Salmonella_phage(43.33%)

capsid,integrase,terminase,portal,tail,tRNA,lysis,protease,head

attL 2733285:2733299|attR 2768637:2768651

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBJ52119.1\|2719905_2722293_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
QBJ52120.1\|2722308_2723292_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	1.1e-33	38.5
QBJ54343.1\|2723428_2723473_-\|tRNA	phenylalanyl--tRNA ligase operon leader peptide	NA	NA	NA	NA
QBJ52121.1\|2723593_2723950_-	50S ribosomal protein L20	NA	NA	NA	NA
QBJ52122.1\|2724000_2724198_-	50S ribosomal protein L35	NA	NA	NA	NA
QBJ52123.1\|2724293_2724836_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	4.8e-15	32.7
QBJ52124.1\|2724839_2726768_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	1.6e-129	37.6
QBJ52125.1\|2727099_2728368_-	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	2.9e-236	95.0
QBJ52126.1\|2728370_2728790_-	translesion error-prone DNA polymerase V subunit UmuD	A0A1W6JNS2	Morganella_phage	3.8e-36	59.8
QBJ52127.1\|2729026_2730325_-\|tail	phage tail protein	I6R0Q9	Salmonella_phage	5.0e-244	99.1
QBJ52128.1\|2730335_2731295_-	hypothetical protein	H6WRW5	Salmonella_phage	2.8e-183	99.7
QBJ52129.1\|2731303_2734024_-\|tail	phage tail protein	S4TTF5	Salmonella_phage	0.0e+00	99.9
2733285:2733299	attL	NA	NA	NA	NA
QBJ52130.1\|2734023_2734422_-	hypothetical protein	S4TR39	Salmonella_phage	2.9e-70	94.7
QBJ52131.1\|2734428_2735013_-	hypothetical protein	S4TND4	Salmonella_phage	1.0e-103	96.9
QBJ52132.1\|2735012_2735606_-	hypothetical protein	S4TSP7	Salmonella_phage	4.3e-110	99.0
QBJ52133.1\|2735768_2736023_+	hypothetical protein	NA	NA	NA	NA
QBJ52134.1\|2736393_2739684_-\|tail	phage tail tape measure protein	Q9MCS3	Enterobacteria_phage	0.0e+00	69.6
QBJ52135.1\|2739747_2740347_-	hypothetical protein	NA	NA	NA	NA
QBJ52136.1\|2740414_2740711_-	DUF4035 domain-containing protein	S4TND7	Salmonella_phage	2.9e-46	100.0
QBJ52137.1\|2740722_2741094_-\|tail	phage tail protein	S4TSQ0	Salmonella_phage	4.4e-60	90.9
QBJ52138.1\|2741121_2741826_-\|tail	phage tail protein	K7PHL2	Enterobacterial_phage	4.4e-93	74.4
QBJ52139.1\|2741882_2742230_-	DUF3168 domain-containing protein	S4TTG3	Salmonella_phage	5.5e-57	96.5
QBJ52140.1\|2742226_2742676_-	hypothetical protein	S4TR46	Salmonella_phage	3.5e-72	95.3
QBJ52141.1\|2742672_2743011_-\|head,tail	head-tail adaptor protein	A0A2H4JHK5	uncultured_Caudovirales_phage	6.6e-39	70.5
QBJ52142.1\|2743020_2743347_-\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	5.2e-49	85.2
QBJ52143.1\|2743346_2743571_-	hypothetical protein	K7PHI6	Enterobacteria_phage	2.5e-10	66.0
QBJ52144.1\|2743614_2744832_-\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	6.0e-199	88.9
QBJ52145.1\|2744841_2745690_-\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	1.3e-131	87.9
QBJ52146.1\|2745703_2747011_-\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	9.3e-214	85.1
QBJ52147.1\|2747010_2748753_-\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	5.9e-139	45.3
QBJ52148.1\|2748706_2749171_-\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	1.3e-48	62.1
QBJ52149.1\|2749303_2749648_-	HNH endonuclease	K7P7P6	Enterobacteria_phage	1.0e-47	75.7
QBJ52150.1\|2749766_2750234_-\|lysis	lysis protein	A0A1V0E5Q6	Salmonella_phage	3.8e-77	98.7
QBJ52151.1\|2750230_2750728_-	lysozyme	A0A1V0E5Q7	Salmonella_phage	1.4e-93	100.0
QBJ52152.1\|2750727_2751000_-	hypothetical protein	A0A1V0E5R8	Salmonella_phage	5.7e-41	98.9
QBJ52153.1\|2751223_2751742_-	endodeoxyribonuclease	A0A1V0E5R7	Salmonella_phage	5.9e-95	100.0
QBJ52154.1\|2751829_2752027_-	hypothetical protein	NA	NA	NA	NA
QBJ52155.1\|2752294_2753068_-	antitermination protein	Q76H66	Enterobacteria_phage	5.3e-132	99.6
QBJ52156.1\|2753064_2753247_-	hypothetical protein	C6ZR61	Salmonella_phage	6.1e-23	95.0
QBJ52157.1\|2753234_2753705_-	hypothetical protein	C6ZR60	Salmonella_phage	7.9e-91	100.0
QBJ52158.1\|2753685_2753922_-	hypothetical protein	C6ZR59	Salmonella_phage	3.4e-34	88.5
QBJ52159.1\|2753914_2754085_-	NinF family protein	I6R994	Salmonella_phage	7.4e-23	87.0
QBJ52160.1\|2754081_2754258_-	NinE family protein	I6RSI9	Salmonella_phage	1.5e-26	98.3
QBJ52161.1\|2754254_2754665_-	recombination protein NinB	A0A0P0ZCW6	Stx2-converting_phage	3.2e-72	100.0
QBJ52162.1\|2754636_2754993_-	hypothetical protein	K7PHN9	Enterobacterial_phage	4.6e-59	96.5
QBJ52163.1\|2755209_2755290_-	histone H1	Q9MCP6	Enterobacteria_phage	1.7e-06	96.2
QBJ52164.1\|2755289_2756741_-	helicase DnaB	Q7Y2K5	Escherichia_phage	7.2e-276	99.2
QBJ52165.1\|2756715_2757606_-	DNA replication protein	Q716D3	Shigella_phage	3.8e-158	99.3
QBJ52166.1\|2757788_2758067_-	hypothetical protein	K7P8A8	Enterobacteria_phage	1.1e-42	100.0
QBJ52167.1\|2758175_2758370_-	Cro/Cl family transcriptional regulator	K7PLQ6	Enterobacteria_phage	6.7e-28	98.4
QBJ52168.1\|2758476_2759193_+	helix-turn-helix domain-containing protein	K7PGR7	Enterobacteria_phage	9.2e-123	100.0
QBJ52169.1\|2759210_2759579_+	hypothetical protein	K7P6G1	Enterobacteria_phage	1.3e-56	99.2
QBJ52170.1\|2760154_2760460_+	hypothetical protein	A5VW99	Enterobacteria_phage	2.9e-25	91.8
QBJ54344.1\|2760468_2760735_+	hypothetical protein	NA	NA	NA	NA
QBJ52171.1\|2760790_2761240_+	hypothetical protein	I6RSN8	Salmonella_phage	8.7e-71	89.3
QBJ52172.1\|2761318_2761789_+	hypothetical protein	A0A1I9LJN4	Stx_converting_phage	3.1e-87	98.7
QBJ52173.1\|2761878_2762154_+	hypothetical protein	K7PGS9	Enterobacteria_phage	1.6e-46	100.0
QBJ52174.1\|2762408_2763116_+	recombinase	K7PKU3	Enterobacteria_phage	1.6e-119	88.5
QBJ52175.1\|2763115_2763400_+	sigma-70 family RNA polymerase sigma factor	Q76H41	Enterobacteria_phage	1.4e-45	100.0
QBJ52176.1\|2763446_2763740_+	RecBCD nuclease inhibitor	Q76H42	Enterobacteria_phage	8.8e-48	97.9
QBJ52177.1\|2763750_2763921_+	DUF2737 domain-containing protein	I6S642	Salmonella_phage	6.1e-25	100.0
QBJ52178.1\|2763917_2764415_+	Eae protein	A0A0N6WGF1	Salmonella_phage	3.5e-73	82.4
QBJ52179.1\|2764411_2764642_+	hypothetical protein	G8C7U9	Escherichia_phage	5.5e-29	89.3
QBJ52180.1\|2764638_2764884_+	hypothetical protein	A0A1V0E5L1	Salmonella_phage	1.0e-33	92.3
QBJ52181.1\|2764880_2765648_+	Ead protein	A0A075B8K3	Enterobacteria_phage	1.3e-69	60.1
QBJ52182.1\|2765649_2765907_+	hypothetical protein	A0A192Y5W0	Salmonella_phage	5.9e-40	95.3
QBJ52183.1\|2766836_2767082_+	hypothetical protein	A0A1P8DTG1	Proteus_phage	9.1e-14	56.7
QBJ52184.1\|2767027_2768239_-\|integrase	integrase	I6R9B6	Salmonella_phage	2.1e-236	99.3
2768637:2768651	attR	NA	NA	NA	NA

DBSCAN-SWA_6

3000142 : 3046635

Salmonella_phage(45.28%)

integrase,terminase,tail,lysis,protease,head

attL 2997080:2997093|attR 3047557:3047570

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2997080:2997093	attL	NA	NA	NA	NA
QBJ54354.1\|3000142_3000463_-	hypothetical protein	E5G6P3	Salmonella_phage	6.8e-09	76.6
QBJ52429.1\|3000486_3000723_+	hypothetical protein	NA	NA	NA	NA
QBJ52430.1\|3001113_3001989_+	SPI-2 type III secretion system effector PipB	NA	NA	NA	NA
QBJ52431.1\|3002210_3002891_+\|protease	type III secretion system effector protease PipA	Q9MBM0	Phage_Gifsy-2	2.6e-82	71.0
QBJ52432.1\|3003279_3003546_+	hypothetical protein	A0A0M3ULK3	Salmonella_phage	7.3e-33	78.4
QBJ52433.1\|3003602_3004250_+	hypothetical protein	NA	NA	NA	NA
QBJ54355.1\|3004292_3004490_-	hypothetical protein	S4TTF2	Salmonella_phage	1.4e-09	97.0
QBJ52434.1\|3005115_3005508_-	DUF1353 domain-containing protein	I1TQ41	Pseudomonas_phage	8.5e-14	37.4
QBJ52435.1\|3005617_3006226_-	DUF4376 domain-containing protein	S5MBX6	Escherichia_phage	1.1e-31	44.7
QBJ52436.1\|3006288_3006474_-	hypothetical protein	NA	NA	NA	NA
QBJ52437.1\|3006722_3007241_-\|tail	phage tail protein	A0A0U2QV64	Escherichia_phage	2.0e-47	53.8
QBJ52438.1\|3007255_3008788_-\|tail	phage tail protein	S4TP62	Salmonella_phage	1.4e-128	66.2
QBJ52439.1\|3008787_3009468_-	DUF2612 domain-containing protein	A0A0M5M1K4	Salmonella_phage	5.5e-125	96.0
QBJ52440.1\|3009464_3010664_-	hypothetical protein	A0A0M4RD32	Salmonella_phage	5.5e-213	96.7
QBJ52441.1\|3010664_3011018_-	hypothetical protein	A0A0M4R339	Salmonella_phage	3.0e-58	95.7
QBJ52442.1\|3011017_3011770_-	translation initiation factor IF-2	A0A0M5M1K7	Salmonella_phage	9.7e-91	69.8
QBJ52443.1\|3011888_3012344_+	hypothetical protein	NA	NA	NA	NA
QBJ52444.1\|3012427_3012760_-	hypothetical protein	A0A0M4RTY3	Salmonella_phage	1.7e-23	69.1
QBJ52445.1\|3012756_3013824_-	hypothetical protein	A0A0M4QX01	Salmonella_phage	2.0e-174	91.5
QBJ52446.1\|3013826_3014129_-	hypothetical protein	A0A0M4R5B7	Salmonella_phage	4.2e-53	100.0
QBJ52447.1\|3014128_3014704_-	hypothetical protein	A0A0M3ULD5	Salmonella_phage	9.1e-97	99.5
QBJ52448.1\|3014703_3016713_-	lytic transglycosylase	A0A0M4REK7	Salmonella_phage	0.0e+00	95.2
QBJ54356.1\|3016702_3016879_-	NTP pyrophosphohydrolase	A0A2H4J1A2	uncultured_Caudovirales_phage	4.7e-12	72.9
QBJ52449.1\|3016890_3017343_-	hypothetical protein	A0A0M4S6U8	Salmonella_phage	1.3e-61	78.7
QBJ52450.1\|3017346_3017787_-	DUF3277 domain-containing protein	A0A2H4J619	uncultured_Caudovirales_phage	2.5e-54	73.3
QBJ52451.1\|3017798_3018944_-	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	5.9e-164	74.8
QBJ52452.1\|3018947_3019493_-	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	7.4e-48	50.8
QBJ52453.1\|3019485_3019890_-\|head,tail	head-tail adaptor	A0A2H4J1A4	uncultured_Caudovirales_phage	4.1e-43	69.2
QBJ52454.1\|3019889_3020399_-	hypothetical protein	A0A2H4J488	uncultured_Caudovirales_phage	8.5e-22	40.7
QBJ52455.1\|3020395_3020806_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	2.5e-32	57.4
QBJ52456.1\|3020774_3021143_-	hypothetical protein	NA	NA	NA	NA
QBJ52457.1\|3021192_3022140_-	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	1.2e-98	55.9
QBJ52458.1\|3022151_3022655_-	hypothetical protein	A0A0M4QWZ6	Salmonella_phage	3.4e-31	46.4
QBJ52459.1\|3022666_3023944_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	1.6e-77	42.8
QBJ52460.1\|3023995_3024529_-	hypothetical protein	A0A0M4REK0	Salmonella_phage	5.5e-48	56.9
QBJ52461.1\|3024599_3026069_-	hypothetical protein	A0A0M4S6U1	Salmonella_phage	1.1e-157	55.7
QBJ52462.1\|3026108_3027527_-\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	6.8e-186	70.0
QBJ52463.1\|3027492_3028245_-	hypothetical protein	A0A0M3ULJ9	Salmonella_phage	2.6e-11	55.2
QBJ54357.1\|3028308_3028497_-	DUF826 domain-containing protein	NA	NA	NA	NA
QBJ52464.1\|3028809_3029277_-\|lysis	lysis protein	S4TNN7	Salmonella_phage	2.5e-60	80.6
QBJ52465.1\|3029273_3030185_-	site-specific DNA-methyltransferase	A0A088FRS2	Escherichia_phage	3.2e-88	53.0
QBJ52466.1\|3030181_3030670_-	lysozyme	M9P0E5	Enterobacteria_phage	4.6e-57	68.1
QBJ54358.1\|3030647_3030950_-	alpha/beta hydrolase	NA	NA	NA	NA
QBJ52467.1\|3031152_3031341_-	hypothetical protein	NA	NA	NA	NA
QBJ52468.1\|3031733_3032312_-	DUF1133 domain-containing protein	A0A0U2S606	Escherichia_phage	2.4e-44	52.0
QBJ52469.1\|3032308_3032602_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	2.1e-33	65.3
QBJ52470.1\|3032598_3033195_-	DUF1367 domain-containing protein	H9C173	Pectobacterium_phage	1.5e-81	73.7
QBJ52471.1\|3033263_3033455_-	hypothetical protein	NA	NA	NA	NA
QBJ52472.1\|3033638_3033977_-	hypothetical protein	A0A193GYX4	Enterobacter_phage	3.7e-50	86.6
QBJ52473.1\|3033976_3034147_-	methyltransferase	I6S1S6	Salmonella_phage	6.3e-06	87.5
QBJ52474.1\|3034143_3034746_-	adenine methylase	G9L699	Escherichia_phage	1.7e-98	87.3
QBJ52475.1\|3034738_3034987_-	hypothetical protein	NA	NA	NA	NA
QBJ52476.1\|3034990_3035671_-	hypothetical protein	NA	NA	NA	NA
QBJ52477.1\|3035708_3037097_-	replicative DNA helicase	Q76H51	Enterobacteria_phage	1.2e-105	47.1
QBJ52478.1\|3037093_3038074_-	helix-turn-helix domain-containing protein	H9C164	Pectobacterium_phage	2.3e-44	80.6
QBJ52479.1\|3038076_3038301_-	hypothetical protein	H9C163	Pectobacterium_phage	1.0e-08	44.7
QBJ52480.1\|3038323_3038770_-	hypothetical protein	H9C162	Pectobacterium_phage	5.5e-25	50.4
QBJ54359.1\|3038704_3038920_+	hypothetical protein	NA	NA	NA	NA
QBJ52481.1\|3038834_3039068_-	XRE family transcriptional regulator	A0A0U2S629	Escherichia_phage	6.2e-12	48.6
QBJ52482.1\|3039166_3039631_+	transcriptional regulator	A0A0U2QW76	Escherichia_phage	2.7e-35	51.7
QBJ52483.1\|3040315_3040639_+	hypothetical protein	NA	NA	NA	NA
QBJ52484.1\|3040646_3040892_+	hypothetical protein	A0A1B1W282	Salmonella_phage	3.5e-13	53.8
QBJ52485.1\|3040921_3043195_+	hypothetical protein	H9C157	Pectobacterium_phage	9.4e-105	35.0
QBJ52486.1\|3043191_3043746_+	hypothetical protein	H9C156	Pectobacterium_phage	1.3e-47	59.3
QBJ52487.1\|3043748_3043931_+	hypothetical protein	NA	NA	NA	NA
QBJ52488.1\|3043980_3044178_+	hypothetical protein	H9C154	Pectobacterium_phage	8.3e-10	58.5
QBJ52489.1\|3044143_3044368_+	DUF4224 domain-containing protein	NA	NA	NA	NA
QBJ52490.1\|3044368_3045388_+\|integrase	integrase	A0A192Y7M7	Salmonella_phage	1.2e-91	53.5
QBJ52491.1\|3045975_3046635_+	transmembrane protein	A0A2H4JFM9	uncultured_Caudovirales_phage	2.7e-44	52.4
3047557:3047570	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3280173 : 3322131

Salmonella_phage(70.0%)

integrase,terminase,portal,tail,lysis,holin,coat

attL 3279724:3279745|attR 3322197:3322218

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3279724:3279745	attL	NA	NA	NA	NA
QBJ52693.1\|3280173_3280536_+	GtrA family protein	I1TED9	Salmonella_phage	6.2e-51	82.5
QBJ52694.1\|3280532_3281450_+	glycosyltransferase	I1TED8	Salmonella_phage	1.3e-161	93.1
QBJ52695.1\|3281446_3282898_+	hypothetical protein	NA	NA	NA	NA
QBJ52696.1\|3282933_3284694_-	hypothetical protein	I6S5Y0	Salmonella_phage	3.0e-58	88.3
QBJ52697.1\|3284793_3285672_-	phage repressor protein/antirepressor Ant	I6R977	Salmonella_phage	1.1e-96	78.9
QBJ52698.1\|3285734_3285908_-	Arc family DNA-binding protein	NA	NA	NA	NA
QBJ52699.1\|3285996_3286233_+	Arc family DNA-binding protein	G0ZNE9	Cronobacter_phage	2.2e-17	59.2
QBJ52700.1\|3286229_3286439_+	hypothetical protein	I6R975	Salmonella_phage	5.9e-30	98.6
QBJ52701.1\|3286413_3286599_-	hypothetical protein	I6RSG3	Salmonella_phage	1.1e-08	100.0
QBJ52702.1\|3286624_3286849_+	hypothetical protein	NA	NA	NA	NA
QBJ52703.1\|3286862_3287228_-	hypothetical protein	A0A192Y6W5	Salmonella_phage	2.1e-67	100.0
QBJ52704.1\|3287258_3287447_+	hypothetical protein	NA	NA	NA	NA
QBJ52705.1\|3287464_3289330_-	DNA transfer protein	A0A2H4FNB8	Salmonella_phage	0.0e+00	98.4
QBJ52706.1\|3289329_3290727_-	DNA transfer protein	A0A2H4FND5	Salmonella_phage	6.9e-215	85.8
QBJ52707.1\|3290737_3291430_-	DNA transfer protein	A0A0M4RTU3	Salmonella_phage	3.7e-105	96.1
QBJ52708.1\|3291432_3291888_-	hypothetical protein	E7C9U3	Salmonella_phage	6.7e-87	99.3
QBJ52709.1\|3291887_3292526_-\|tail	phage tail protein	A0A088CPT1	Enterobacteria_phage	7.0e-90	99.1
QBJ52710.1\|3292529_3293948_-	hypothetical protein	I1TEJ1	Salmonella_phage	1.5e-273	98.9
QBJ52711.1\|3293907_3294408_-	hypothetical protein	I1TEJ0	Salmonella_phage	1.2e-89	98.2
QBJ52712.1\|3294391_3294952_-	hypothetical protein	I6S1J7	Salmonella_phage	7.0e-102	98.4
QBJ52713.1\|3294992_3296285_-\|coat	coat protein	Q76H21	Enterobacteria_phage	1.8e-241	99.3
QBJ52714.1\|3296284_3297196_-	scaffolding protein	A0A1R3Y5R6	Salmonella_virus	1.1e-160	99.7
QBJ52715.1\|3297209_3299387_-\|portal	portal protein	I6R968	Salmonella_phage	0.0e+00	98.2
QBJ52716.1\|3299386_3300886_-\|terminase	terminase	A0A0M4S5Z3	Salmonella_phage	3.1e-306	99.6
QBJ52717.1\|3300863_3301352_-	DNA-packaging protein	A8CGG1	Salmonella_phage	2.9e-88	100.0
QBJ52718.1\|3301355_3301760_-	Decoration protein	C6ZR73	Salmonella_phage	1.5e-66	99.3
QBJ52719.1\|3301762_3302005_-	hypothetical protein	A0A1R3Y5V5	Salmonella_virus	1.7e-36	100.0
QBJ52720.1\|3302108_3302489_-	hypothetical protein	Q716B1	Shigella_phage	1.4e-66	99.2
QBJ52721.1\|3302772_3303291_-	Rha family transcriptional regulator	A0A2D1GLJ3	Escherichia_phage	3.2e-93	100.0
QBJ52722.1\|3303496_3303934_-\|lysis	lysis protein	K7P710	Enterobacteria_phage	4.2e-70	95.9
QBJ52723.1\|3303930_3304407_-	lysozyme	K7PKV2	Enterobacteria_phage	1.7e-88	100.0
QBJ52724.1\|3304390_3304714_-\|holin	phage holin, lambda family	G5DA93	Enterobacteria_phage	1.3e-52	100.0
QBJ52725.1\|3304951_3305149_-	hypothetical protein	NA	NA	NA	NA
QBJ52726.1\|3305421_3306045_-	antitermination protein	C6ZR62	Salmonella_phage	9.8e-113	98.1
QBJ52727.1\|3306041_3306221_-	hypothetical protein	A0A1V0E5I7	Salmonella_phage	7.1e-24	100.0
QBJ52728.1\|3306201_3306405_-	protein ninH	I6RSQ6	Salmonella_phage	1.4e-31	97.0
QBJ52729.1\|3306401_3306626_-	protein ninY	I6R0N9	Salmonella_phage	1.8e-37	98.6
QBJ52730.1\|3306622_3307279_-	HNH endonuclease	A0A2I7QND8	Vibrio_phage	3.4e-39	45.4
QBJ52731.1\|3307275_3307671_-	hypothetical protein	A0A0M4REJ2	Salmonella_phage	2.2e-70	97.7
QBJ52732.1\|3307667_3307964_-	hypothetical protein	A0A0M3ULJ7	Salmonella_phage	7.5e-47	97.8
QBJ52733.1\|3307926_3308103_-	NinF family protein	A0A0M4S6T3	Salmonella_phage	1.8e-27	96.6
QBJ52734.1\|3308099_3308276_-	NinE family protein	I6RSI9	Salmonella_phage	2.3e-27	100.0
QBJ52735.1\|3308242_3308416_-	protein ninD	C6ZR56	Salmonella_phage	5.2e-32	100.0
QBJ52736.1\|3308412_3308850_-	recombination protein NinB	A0A192Y6T2	Salmonella_phage	9.4e-78	98.6
QBJ52737.1\|3308864_3309071_-	hypothetical protein	I1TEG6	Salmonella_phage	2.7e-35	98.5
QBJ52738.1\|3309074_3309359_-	hypothetical protein	A0A2H4FNE3	Salmonella_phage	4.9e-27	57.8
QBJ52739.1\|3309358_3309553_-	hypothetical protein	NA	NA	NA	NA
QBJ52740.1\|3309626_3309905_-	hypothetical protein	Q5G8S7	Enterobacteria_phage	1.0e-45	93.5
QBJ52741.1\|3309905_3311786_-	bifunctional DNA primase/helicase	I6S1U6	Salmonella_phage	0.0e+00	97.9
QBJ52742.1\|3311893_3312742_-	replication protein	C6ZR51	Salmonella_phage	8.0e-150	94.7
QBJ52743.1\|3312924_3313203_-	hypothetical protein	A0A220NRS4	Escherichia_phage	2.2e-40	93.5
QBJ52744.1\|3313310_3313526_-	XRE family transcriptional regulator	A0A0M4RTV8	Salmonella_phage	4.1e-34	100.0
QBJ54367.1\|3313644_3314307_+	LexA family transcriptional repressor	A0A0M4QWY1	Salmonella_phage	1.8e-125	99.1
QBJ52745.1\|3314674_3315007_+	hypothetical protein	A0A1R3Y5R1	Salmonella_virus	1.0e-52	95.5
QBJ52746.1\|3315015_3315486_+	hypothetical protein	A0A1I9LJN4	Stx_converting_phage	3.1e-87	98.7
QBJ52747.1\|3315645_3315900_+	hypothetical protein	NA	NA	NA	NA
QBJ52748.1\|3316104_3316299_+	hypothetical protein	NA	NA	NA	NA
QBJ52749.1\|3316386_3316575_+	hypothetical protein	C6ZR38	Salmonella_phage	1.7e-23	82.3
QBJ52750.1\|3316583_3317291_+	recombinase	A0A2H4FN95	Salmonella_phage	5.0e-121	89.4
QBJ52751.1\|3317290_3317575_+	sigma-70 family RNA polymerase sigma factor	Q76H41	Enterobacteria_phage	1.4e-45	100.0
QBJ52752.1\|3317621_3317915_+	RecBCD nuclease inhibitor	A0A2H4FNA1	Salmonella_phage	1.4e-48	96.9
QBJ52753.1\|3317925_3318096_+	DUF2737 domain-containing protein	A0A220NQV6	Salmonella_phage	1.3e-24	98.2
QBJ52754.1\|3318092_3318503_+	hypothetical protein	A0A1R3Y5S0	Salmonella_virus	4.4e-69	94.1
QBJ52755.1\|3318499_3319132_+	hypothetical protein	A0A1R3Y5T1	Salmonella_virus	2.7e-25	44.5
QBJ52756.1\|3319133_3319391_+	hypothetical protein	A0A192Y5W0	Salmonella_phage	5.9e-40	95.3
QBJ52757.1\|3320275_3320542_+	hypothetical protein	A0A1V0E5L9	Salmonella_phage	6.3e-45	96.6
QBJ52758.1\|3320864_3321083_+	excisionase	A0A1V0E5M4	Salmonella_phage	5.7e-36	100.0
QBJ52759.1\|3321060_3322131_+\|integrase	integrase	A0A1V0E5M7	Salmonella_phage	1.0e-154	100.0
3322197:3322218	attR	NA	NA	NA	NA

DBSCAN-SWA_8

4581945 : 4629592

Burkholderia_phage(36.36%)

tail,plate,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBJ53871.1\|4581945_4582944_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
QBJ53872.1\|4583031_4584342_-	conjugal transfer protein	NA	NA	NA	NA
QBJ53873.1\|4584588_4585104_+	transcriptional regulator Zur	NA	NA	NA	NA
QBJ53874.1\|4585202_4585412_-	CsbD family protein	NA	NA	NA	NA
QBJ54420.1\|4585433_4585547_-	hypothetical protein	NA	NA	NA	NA
QBJ53875.1\|4585543_4586869_-	MATE family efflux transporter	NA	NA	NA	NA
QBJ53876.1\|4587047_4587656_-	LexA repressor	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
QBJ53877.1\|4587764_4588133_-	diacylglycerol kinase	NA	NA	NA	NA
QBJ53878.1\|4588303_4590724_+	glycerol-3-phosphate 1-O-acyltransferase	NA	NA	NA	NA
QBJ53879.1\|4590822_4591695_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
QBJ53880.1\|4591708_4592206_-	chorismate lyase	NA	NA	NA	NA
QBJ53881.1\|4592386_4593304_-	maltose operon protein MalM	NA	NA	NA	NA
QBJ53882.1\|4593467_4594823_-	maltoporin	NA	NA	NA	NA
QBJ53883.1\|4594911_4596021_-	maltose/maltodextrin import ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
QBJ53884.1\|4596382_4597573_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
QBJ53885.1\|4597704_4599249_+	maltose ABC transporter permease MalF	NA	NA	NA	NA
QBJ53886.1\|4599263_4600154_+	maltose ABC transporter permease	NA	NA	NA	NA
QBJ53887.1\|4600319_4600730_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
QBJ53888.1\|4600872_4602969_-	YjbH domain-containing protein	NA	NA	NA	NA
QBJ53889.1\|4602968_4603706_-	hypothetical protein	NA	NA	NA	NA
QBJ53890.1\|4603702_4604341_-	YjbF family lipoprotein	NA	NA	NA	NA
QBJ53891.1\|4604404_4604647_-	outer membrane protein	NA	NA	NA	NA
QBJ53892.1\|4605090_4606740_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
QBJ53893.1\|4607128_4608478_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
QBJ53894.1\|4608612_4608960_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	7.5e-22	52.6
QBJ53895.1\|4609536_4609824_+	hypothetical protein	Q6QIC8	Burkholderia_phage	5.1e-16	48.1
QBJ53896.1\|4609826_4610432_+	lytic transglycosylase domain-containing protein	Q5ZQZ1	Pseudomonas_phage	1.0e-58	58.8
QBJ53897.1\|4610444_4610759_+	hypothetical protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
QBJ53898.1\|4610918_4611374_+	hypothetical protein	NA	NA	NA	NA
QBJ53899.1\|4611370_4611568_+	hypothetical protein	Q6QIB1	Burkholderia_phage	5.1e-07	52.9
QBJ53900.1\|4611557_4612985_+\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	1.8e-194	71.2
QBJ53901.1\|4612984_4613509_+\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	1.8e-67	69.0
QBJ53902.1\|4613560_4613878_+\|tail	phage tail assembly protein	NA	NA	NA	NA
QBJ53903.1\|4613837_4613966_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
QBJ53904.1\|4614062_4616417_+\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	3.4e-65	30.5
QBJ53905.1\|4616416_4617370_+	chemotaxis protein	A4JWL1	Burkholderia_virus	7.9e-37	51.5
QBJ53906.1\|4617369_4617579_+	hypothetical protein	A4JWL2	Burkholderia_virus	9.8e-17	60.3
QBJ53907.1\|4617566_4618610_+	phage protein D	A4JWL3	Burkholderia_virus	1.5e-76	45.6
QBJ53908.1\|4618619_4619342_+\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.9e-12	42.0
QBJ53909.1\|4619350_4619593_+	hypothetical protein	NA	NA	NA	NA
QBJ53910.1\|4619668_4620031_+	GtrA family protein	U5P0S6	Shigella_phage	9.6e-44	70.8
QBJ53911.1\|4620027_4620957_+	glycosyltransferase	S5FKN0	Shigella_phage	6.7e-150	83.8
QBJ53912.1\|4620956_4622504_+	hypothetical protein	B9UDL6	Salmonella_phage	5.0e-49	30.4
QBJ53913.1\|4622667_4623027_+\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
QBJ53914.1\|4623017_4624133_+\|plate	baseplate protein	Q6QI99	Burkholderia_phage	3.1e-101	52.7
QBJ53915.1\|4624125_4624758_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	1.1e-23	56.4
QBJ53916.1\|4624760_4626419_+\|tail	phage tail protein	A0A0M3ULF6	Salmonella_phage	8.0e-53	52.7
QBJ53917.1\|4626425_4627040_+	DUF4376 domain-containing protein	NA	NA	NA	NA
QBJ53918.1\|4627036_4627492_+	hypothetical protein	NA	NA	NA	NA
QBJ54421.1\|4627868_4628285_+	serine acetyltransferase	NA	NA	NA	NA
QBJ53919.1\|4628863_4629592_+	hypothetical protein	A0A077SLK3	Escherichia_phage	5.6e-35	37.3

DBSCAN-SWA_9

4699177 : 4794971

Escherichia_phage(41.3%)

capsid,integrase,terminase,portal,plate,tail,tRNA,lysis,holin,head

attL 4759287:4759333|attR 4790025:4790071

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBJ53970.1\|4699177_4700278_+\|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	NA	NA	NA	NA
QBJ53971.1\|4700324_4700684_-	hypothetical protein	NA	NA	NA	NA
QBJ53972.1\|4700699_4701335_-	HTH-type transcriptional repressor FabR	NA	NA	NA	NA
QBJ53973.1\|4701336_4701525_+	hypothetical protein	NA	NA	NA	NA
QBJ53974.1\|4701533_4702934_+	Si-specific NAD(P)(+) transhydrogenase	NA	NA	NA	NA
QBJ53975.1\|4702916_4703834_-	DNA-binding transcriptional regulator OxyR	NA	NA	NA	NA
QBJ53976.1\|4704117_4705494_-	argininosuccinate lyase	NA	NA	NA	NA
QBJ53977.1\|4705611_4706388_-	acetylglutamate kinase	NA	NA	NA	NA
QBJ53978.1\|4706395_4707400_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
QBJ53979.1\|4707488_4708640_+	acetylornithine deacetylase	NA	NA	NA	NA
QBJ53980.1\|4709031_4711683_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
QBJ53981.1\|4711893_4713627_+	phosphoethanolamine transferase CptA	NA	NA	NA	NA
QBJ53982.1\|4713787_4714624_+	AraC family transcriptional regulator	NA	NA	NA	NA
QBJ53983.1\|4714878_4715541_+	fructose-6-phosphate aldolase	A0A0E3F0E2	Synechococcus_phage	2.5e-29	34.1
QBJ53984.1\|4715552_4716656_+	glycerol dehydrogenase	NA	NA	NA	NA
QBJ53985.1\|4716914_4717538_+	DUF1287 domain-containing protein	NA	NA	NA	NA
QBJ53986.1\|4717595_4719776_-	catalase/peroxidase HPI	NA	NA	NA	NA
QBJ53987.1\|4719940_4720831_-	5,10-methylenetetrahydrofolate reductase	NA	NA	NA	NA
QBJ53988.1\|4721025_4722582_-	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA
QBJ53989.1\|4722717_4723842_+	cytoplasmic protein	NA	NA	NA	NA
QBJ53990.1\|4724076_4725075_+	hypothetical protein	NA	NA	NA	NA
QBJ53991.1\|4725077_4725935_+	mechanosensitive ion channel protein MscS	NA	NA	NA	NA
QBJ53992.1\|4726060_4728493_-	bifunctional aspartate kinase/homoserine dehydrogenase II	NA	NA	NA	NA
QBJ53993.1\|4728495_4729656_-	cystathionine gamma-synthase	NA	NA	NA	NA
QBJ53994.1\|4729920_4730238_+	met repressor	NA	NA	NA	NA
QBJ53995.1\|4730694_4732485_+	aryl-sulfate sulfotransferase	NA	NA	NA	NA
QBJ54423.1\|4732777_4732963_-	hypothetical protein	NA	NA	NA	NA
QBJ53996.1\|4733480_4733693_-	50S ribosomal protein L31	NA	NA	NA	NA
QBJ53997.1\|4733896_4736095_+	primosomal protein N'	NA	NA	NA	NA
QBJ53998.1\|4736249_4737275_+	DNA-binding transcriptional regulator CytR	NA	NA	NA	NA
QBJ53999.1\|4737368_4738343_+	cell division protein FtsN	NA	NA	NA	NA
QBJ54000.1\|4738434_4738965_+	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA
QBJ54001.1\|4738974_4740306_+	HslU--HslV peptidase ATPase subunit	W6AS21	Erwinia_phage	2.4e-44	28.3
QBJ54002.1\|4740372_4741302_+	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
QBJ54003.1\|4741394_4741880_+	ribonuclease E activity regulator RraA	NA	NA	NA	NA
QBJ54004.1\|4742101_4742341_-	cell division protein ZapB	NA	NA	NA	NA
QBJ54005.1\|4742739_4743585_+	aquaporin	M1HWZ0	Paramecium_bursaria_Chlorella_virus	2.0e-15	28.6
QBJ54006.1\|4743605_4745114_+	glycerol kinase	NA	NA	NA	NA
QBJ54007.1\|4745225_4746236_+	fructose-bisphosphatase class II	NA	NA	NA	NA
QBJ54008.1\|4746332_4747079_+	ferredoxin--NADP(+) reductase	NA	NA	NA	NA
QBJ54009.1\|4747188_4747617_-	DUF805 domain-containing protein	NA	NA	NA	NA
QBJ54010.1\|4747717_4748314_+	DUF1454 domain-containing protein	NA	NA	NA	NA
QBJ54011.1\|4748426_4749194_+	triose-phosphate isomerase	NA	NA	NA	NA
QBJ54012.1\|4749303_4750608_-	citrate transporter	NA	NA	NA	NA
QBJ54424.1\|4750705_4751428_-	GntR family transcriptional regulator	NA	NA	NA	NA
QBJ54013.1\|4751490_4752531_-	ADP-ribosylglycohydrolase family protein	NA	NA	NA	NA
QBJ54014.1\|4752540_4753500_-	aminoimidazole riboside kinase	NA	NA	NA	NA
QBJ54015.1\|4753510_4754845_-	MFS transporter	NA	NA	NA	NA
QBJ54016.1\|4755109_4755865_-	CDP-diacylglycerol diphosphatase	NA	NA	NA	NA
QBJ54017.1\|4755965_4756955_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA
QBJ54018.1\|4757158_4758121_-	ATP-dependent 6-phosphofructokinase	NA	NA	NA	NA
QBJ54019.1\|4758305_4759208_-	cation-efflux pump FieF	NA	NA	NA	NA
4759287:4759333	attL	NA	NA	NA	NA
QBJ54020.1\|4759444_4759699_-	transcriptional regulator	M1SNR2	Escherichia_phage	1.3e-44	100.0
QBJ54021.1\|4759744_4760908_-	hypothetical protein	U5N3V4	Enterobacteria_phage	7.0e-205	99.2
QBJ54022.1\|4760907_4761387_-\|tail	phage tail protein	O64315	Escherichia_phage	1.5e-84	99.4
QBJ54023.1\|4761401_4763849_-\|tail	phage tail tape measure protein	M1T2S3	Escherichia_phage	0.0e+00	94.8
QBJ54024.1\|4763841_4763961_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
QBJ54025.1\|4763993_4764269_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	5.7e-41	100.0
QBJ54026.1\|4764325_4764844_-\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	1.4e-93	100.0
QBJ54027.1\|4764856_4766047_-\|tail	phage tail protein	A0A0F7LBW9	Escherichia_phage	4.8e-225	99.5
QBJ54028.1\|4766106_4766700_-	DNA-invertase	A0A0F7LA37	Escherichia_phage	1.8e-103	97.0
QBJ54029.1\|4767506_4768040_+\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	5.7e-77	80.3
QBJ54030.1\|4768044_4768662_-\|tail	tail assembly chaperone	A0A1S6KZY8	Salmonella_phage	5.3e-95	83.6
QBJ54031.1\|4768631_4770098_-\|tail	phage tail protein	A0A0F7LBW5	Escherichia_phage	1.1e-143	84.6
QBJ54032.1\|4770154_4770706_-\|tail	phage tail protein I	A0A0F7LA36	Escherichia_phage	1.5e-104	99.5
QBJ54033.1\|4770698_4771607_-\|plate	baseplate assembly protein	Q858V6	Yersinia_virus	8.8e-163	100.0
QBJ54034.1\|4771611_4771959_-\|plate	baseplate assembly protein	A0A0F7L9X3	Escherichia_phage	1.7e-58	100.0
QBJ54035.1\|4771955_4772591_-\|plate	phage baseplate assembly protein V	U5N3F0	Enterobacteria_phage	9.0e-114	99.1
QBJ54036.1\|4772657_4773110_-	phage virion morphogenesis protein	A0A0F7LBV9	Escherichia_phage	6.3e-77	100.0
QBJ54037.1\|4773102_4773570_-\|tail	phage tail protein	A0A0F7LA33	Escherichia_phage	8.7e-82	98.7
QBJ54038.1\|4773532_4773706_-\|lysis	phage lysis protein	Q7Y4E1	Escherichia_virus	2.3e-24	96.5
QBJ54039.1\|4773677_4774103_-	protein lysB	U5N3W5	Enterobacteria_phage	4.7e-66	96.5
QBJ54040.1\|4774090_4774516_-	protein lysA	U5N096	Enterobacteria_phage	2.8e-58	95.7
QBJ54041.1\|4774530_4775028_-	lysozyme	A0A0F7LBS0	Escherichia_phage	3.1e-93	100.0
QBJ54042.1\|4775027_4775309_-\|holin	holin	A0A0F7LDF8	Escherichia_phage	3.7e-43	100.0
QBJ54043.1\|4775312_4775516_-\|tail	phage tail protein	U5N3E7	Enterobacteria_phage	4.0e-31	100.0
QBJ54044.1\|4775515_4776025_-\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	1.1e-90	100.0
QBJ54045.1\|4776124_4776868_-\|terminase	terminase	Q94MH3	Enterobacteria_phage	3.1e-121	98.0
QBJ54046.1\|4776871_4777945_-\|capsid	phage major capsid protein, P2 family	Q778Y7	Enterobacteria_phage	6.7e-202	100.0
QBJ54047.1\|4778003_4778858_-\|capsid	capsid scaffolding protein	Q94MF5	Enterobacteria_phage	2.2e-139	99.6
QBJ54048.1\|4779031_4780804_+	oxidoreductase	A0A0F7LCM8	Escherichia_phage	0.0e+00	99.8
QBJ54049.1\|4780803_4781838_+\|portal	phage portal protein	Q858W8	Yersinia_virus	4.2e-201	99.4
QBJ54050.1\|4782178_4784011_-	hypothetical protein	Q2P9X5	Enterobacteria_phage	4.1e-90	32.5
QBJ54051.1\|4784127_4786410_-	replication endonuclease	A0A0F7LBQ2	Escherichia_phage	0.0e+00	98.4
QBJ54052.1\|4786399_4786675_-	hypothetical protein	U5N3W1	Enterobacteria_phage	1.6e-43	97.8
QBJ54053.1\|4786671_4786896_-	hypothetical protein	A0A0F7LDG9	Escherichia_phage	8.5e-35	97.3
QBJ54054.1\|4786895_4787198_-	hypothetical protein	U5N0U2	Enterobacteria_phage	2.5e-45	97.0
QBJ54055.1\|4787197_4787422_-	DUF2732 domain-containing protein	S4TP68	Salmonella_phage	2.3e-32	98.6
QBJ54056.1\|4787485_4787986_-	replication protein B	A0A0F7LBQ6	Escherichia_phage	4.5e-92	100.0
QBJ54057.1\|4788155_4788428_-	hypothetical protein	Q1JS36	Enterobacteria_phage	1.4e-47	100.0
QBJ54058.1\|4788564_4788858_+	transcriptional regulator	Q1JS37	Enterobacteria_phage	2.7e-49	100.0
QBJ54059.1\|4788927_4789908_+\|integrase	integrase	S4TP66	Salmonella_phage	4.7e-186	100.0
QBJ54060.1\|4790093_4790594_-	stress adaptor protein CpxP	NA	NA	NA	NA
4790025:4790071	attR	NA	NA	NA	NA
QBJ54061.1\|4790744_4791443_+	DNA-binding response regulator	Q6XM27	Feldmannia_irregularis_virus	4.0e-06	30.3
QBJ54062.1\|4791439_4792813_+	two-component system sensor histidine kinase CpxA	W8CYF6	Bacillus_phage	7.2e-15	25.6
QBJ54063.1\|4792860_4793064_-	hypothetical protein	NA	NA	NA	NA
QBJ54064.1\|4793184_4793580_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
QBJ54065.1\|4793591_4794344_-	MOSC domain-containing protein	NA	NA	NA	NA
QBJ54066.1\|4794350_4794971_-	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	2.4e-63	58.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP025278

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection