CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
CP025274	Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1923 plasmid pSNE1-1923, complete sequence	0 crisprs	NA	0	0
CP025275	Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1923 plasmid pSNE2-1923	0 crisprs	DEDDh	0	1
CP025273	Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1923 chromosome, complete genome	2 crisprs	RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,cas14j,DEDDh,DinG,c2c9_V-U4	31	12

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP025273_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025273_1

1008109-1009295

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCGN	CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR

19 spacers

cas8e,cse2gr11

The CRISPR arrays of CP025273_1

>merge|CP025273|1|1008109-1009295|CRISPRCasFinder,CRT,PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCGTGCTGGCGGCAAAAGAACTCGCTAAATGGGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGTGCGGCAGCGCGCAATCGAGACACGCCATGTGTTCCCCGCGCCAGCGGGGATAAACCGCACAAAACGCCAGTGGCATGGTACAACCCGTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGTGACCATGTTTAACTCTAAATCAGGCCGTGTGTTCCCAGCGCCAGCGGGGATAAACCGTCATGCTTTCGACTAAATACTACCGCGACAACGTGTTCCCCGCGCCAGCGGGGATAAACCGAAAATAACAACATTATCAGTGTGAAAAGTCTCGTGTTCCCCGCGCCAGCGGGGATAAACCGAGATATGAAAAACGTAAAAATTTACACCGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCAATAGGACAGCCATTCGAGCGCCCAGAGTTTGTGTTCCCCGCGCCAGCGGGGATAAACCGGTCAGTATGCACTGCTTGATAAAGTCAGGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAACTAACGTCTATAGCTAAATGTAGAGAAAACGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGTTTGGAGTCAATGTTATTTCTTCAGGTCAGTGTTCCCCGCGCCAGCGGGGATAAACCGTCTCGCTGGTTGCTCCAACTCCTGATATGCCGGTGTTCCCCGCGCCAGCGGGGATAAACCGTAAAAATCTTCTTTCATATAACCGTAAGGGTTGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGGTTTTGTCACCTCAACGGTCGGGAGTGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGCAACAGTTTCTTACCGCAAGCAGTTTGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGATCATCGGGATTCATTTTGTTGTCCGGGTGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGTGCTCTATGTCTAAAAATAAAAGCGGTTCGTGTTCCCTGCGCCAGCGGGGATAAACCCAGCACAATCATTATTAGATGAACTTTCATCAAGTGTTCCCCGCGCAGCGGGGATAAACCGGGGATCGCGCTGGCGGTCGCATCCGTTGCCGTGTGTTCCCCGCGCCAACAAGGATAGCCGT

>CP025273|1|1|1008109-1009295|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCTGGCGGCAAAAGAACTCGCTAAATGGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGTGCGGCAGCGCGCAATCGAGACACGCCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACAAAACGCCAGTGGCATGGTACAACCCGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTGACCATGTTTAACTCTAAATCAGGCCGT
GTGTTCCCAGCGCCAGCGGGGATAAACCG	TCATGCTTTCGACTAAATACTACCGCGACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAATAACAACATTATCAGTGTGAAAAGTCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGATATGAAAAACGTAAAAATTTACACCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAATAGGACAGCCATTCGAGCGCCCAGAGTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCAGTATGCACTGCTTGATAAAGTCAGGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACTAACGTCTATAGCTAAATGTAGAGAAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGTTTGGAGTCAATGTTATTTCTTCAGGTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTCGCTGGTTGCTCCAACTCCTGATATGCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAAAATCTTCTTTCATATAACCGTAAGGGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGTTTTGTCACCTCAACGGTCGGGAGTGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGCAACAGTTTCTTACCGCAAGCAGTTTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCATCGGGATTCATTTTGTTGTCCGGGTGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTGCTCTATGTCTAAAAATAAAAGCGGTTC
GTGTTCCCTGCGCCAGCGGGGATAAACCC	AGCACAATCATTATTAGATGAACTTTCATCA
AGTGTTCCCCGCGCAGCGGGGATAAACCG	GGGATCGCGCTGGCGGTCGCATCCGTTGCCGT
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>CP025273|1|1|1008109-1009295|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCTGGCGGCAAAAGAACTCGCTAAATGGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGTGCGGCAGCGCGCAATCGAGACACGCCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACAAAACGCCAGTGGCATGGTACAACCCGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTGACCATGTTTAACTCTAAATCAGGCCGT
GTGTTCCCAGCGCCAGCGGGGATAAACCG	TCATGCTTTCGACTAAATACTACCGCGACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAATAACAACATTATCAGTGTGAAAAGTCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGATATGAAAAACGTAAAAATTTACACCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAATAGGACAGCCATTCGAGCGCCCAGAGTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCAGTATGCACTGCTTGATAAAGTCAGGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACTAACGTCTATAGCTAAATGTAGAGAAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGTTTGGAGTCAATGTTATTTCTTCAGGTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTCGCTGGTTGCTCCAACTCCTGATATGCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAAAATCTTCTTTCATATAACCGTAAGGGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGTTTTGTCACCTCAACGGTCGGGAGTGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGCAACAGTTTCTTACCGCAAGCAGTTTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCATCGGGATTCATTTTGTTGTCCGGGTGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTGCTCTATGTCTAAAAATAAAAGCGGTTC
GTGTTCCCTGCGCCAGCGGGGATAAACCC	AGCACAATCATTATTAGATGAACTTTCATCAA
GTGTTCCCCGCGCAGCGGGGATAAACCGG	GGATCGCGCTGGCGGTCGCATCCGTTGCCGT
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>CP025273|1|1|1008231-1009234|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACAAAACGCCAGTGGCATGGTACAACCCGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTGACCATGTTTAACTCTAAATCAGGCCGT
GTGTTCCCAGCGCCAGCGGGGATAAACCG	TCATGCTTTCGACTAAATACTACCGCGACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAATAACAACATTATCAGTGTGAAAAGTCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGATATGAAAAACGTAAAAATTTACACCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAATAGGACAGCCATTCGAGCGCCCAGAGTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCAGTATGCACTGCTTGATAAAGTCAGGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACTAACGTCTATAGCTAAATGTAGAGAAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGTTTGGAGTCAATGTTATTTCTTCAGGTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTCGCTGGTTGCTCCAACTCCTGATATGCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAAAATCTTCTTTCATATAACCGTAAGGGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGTTTTGTCACCTCAACGGTCGGGAGTGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGCAACAGTTTCTTACCGCAAGCAGTTTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCATCGGGATTCATTTTGTTGTCCGGGTGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTGCTCTATGTCTAAAAATAAAAGCGGTTC
GTGTTCCCTGCGCCAGCGGGGATAAACCC	AGCACAATCATTATTAGATGAACTTTCATCAA
GTGTTCCCCGCGCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
CP025273.1\|QBJ40817.1\|1007140_1007812_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP025273.1\|QBJ40821.1\|1012862_1014575_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
CP025273.1\|QBJ40823.1\|1015273_1015516_-\|hypothetical-protein	unknown	unknown	unknown
CP025273.1\|QBJ44521.1\|1010568_1010739_+\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	unknown
CP025273.1\|QBJ40814.1\|1002958_1003759_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP025273.1\|QBJ40812.1\|998983_1001683_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
CP025273.1\|QBJ44522.1\|1015597_1016551_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
CP025273.1\|QBJ40809.1\|997186_997657_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
CP025273.1\|QBJ40813.1\|1001762_1002350_-\|fimbrial-protein-SteA	unknown	unknown	gnl\|CDD\|185169
CP025273.1\|QBJ40816.1\|1005706_1007005_+\|enolase	unknown	unknown	gnl\|CDD\|234617
CP025273.1\|QBJ40815.1\|1003986_1005624_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
CP025273.1\|QBJ40822.1\|1014650_1015385_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP025273.1\|QBJ40819.1\|1010277_1010640_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP025273.1\|QBJ40825.1\|1021543_1022146_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
CP025273.1\|QBJ40810.1\|997671_998178_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178
CP025273.1\|QBJ40820.1\|1011063_1012863_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
CP025273.1\|QBJ40811.1\|998197_998971_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185177
CP025273.1\|QBJ40808.1\|996653_997190_-\|fimbrial-protein-SteF	unknown	unknown	gnl\|CDD\|185168
CP025273.1\|QBJ40824.1\|1019991_1021527_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP025273.1\|QBJ40818.1\|1009392_1010190_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158

Protein	Function_ID	Function_description	E-value
CP025273.1\|QBJ40817.1\|1007140_1007812_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
CP025273.1\|QBJ40821.1\|1012862_1014575_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP025273.1\|QBJ40814.1\|1002958_1003759_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
CP025273.1\|QBJ40812.1\|998983_1001683_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
CP025273.1\|QBJ44522.1\|1015597_1016551_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP025273.1\|QBJ40809.1\|997186_997657_-\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	1.41178e-100
CP025273.1\|QBJ40813.1\|1001762_1002350_-\|fimbrial-protein-SteA	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	5.36845e-100
CP025273.1\|QBJ40816.1\|1005706_1007005_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP025273.1\|QBJ40815.1\|1003986_1005624_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP025273.1\|QBJ40822.1\|1014650_1015385_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.47943e-138
CP025273.1\|QBJ40819.1\|1010277_1010640_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
CP025273.1\|QBJ40825.1\|1021543_1022146_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	2.49445e-37
CP025273.1\|QBJ40810.1\|997671_998178_-\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	4.31975e-105
CP025273.1\|QBJ40820.1\|1011063_1012863_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP025273.1\|QBJ40811.1\|998197_998971_-\|fimbrial-protein	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
CP025273.1\|QBJ40808.1\|996653_997190_-\|fimbrial-protein-SteF	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	1.00241e-120
CP025273.1\|QBJ40824.1\|1019991_1021527_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
CP025273.1\|QBJ40818.1\|1009392_1010190_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	5.39566e-102

>CP025273.1|QBJ40817.1|1007140_1007812_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>CP025273.1|QBJ40816.1|1005706_1007005_+|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP025273.1|QBJ40815.1|1003986_1005624_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRNEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDAQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>CP025273.1|QBJ40814.1|1002958_1003759_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>CP025273.1|QBJ40813.1|1001762_1002350_-|fimbrial-protein-SteA
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDTILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>CP025273.1|QBJ40812.1|998983_1001683_-|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSVSPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVVSDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESSYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKILEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>CP025273.1|QBJ40811.1|998197_998971_-|fimbrial-protein
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>CP025273.1|QBJ40810.1|997671_998178_-|fimbrial-protein
MTMLTRWKMLVLLCGGFVTGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDASQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
>CP025273.1|QBJ40809.1|997186_997657_-|fimbrial-protein
MKRVLILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSANALTTNVPELGIELQQNGTVFPPGTSLTIDESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>CP025273.1|QBJ40808.1|996653_997190_-|fimbrial-protein-SteF
MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFKLSLQDCKTALANGVLVTFQGVEDSTLPGLLALEPSSEASGFAIGVETAAQQPVSINATVGTAFVLKEGITTINLQARLQKYAGEEVMPGEFSGSATVSFEYQ
>CP025273.1|QBJ40818.1|1009392_1010190_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRGPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>CP025273.1|QBJ40819.1|1010277_1010640_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>CP025273.1|QBJ44521.1|1010568_1010739_+|6-pyruvoyl-tetrahydrobiopterin-synthase
MPFRHVRQAVSGFKGEIFIQRGGHDELSGNKKTAVGYRKAHFLSLTKTILRLVTGN
>CP025273.1|QBJ40820.1|1011063_1012863_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLAATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASSQAETENEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>CP025273.1|QBJ40821.1|1012862_1014575_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVDTFKEEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>CP025273.1|QBJ40822.1|1014650_1015385_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDIHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP025273.1|QBJ40823.1|1015273_1015516_-|hypothetical-protein
MLLGTHSLAAFKQLELFWVYDQFKIRLPAGFFIAASIIIPRKDNHPSCSPHSRFSPKNRVSSSAMPGSHLRVVCISPTDR
>CP025273.1|QBJ44522.1|1015597_1016551_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYMLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>CP025273.1|QBJ40824.1|1019991_1021527_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDLTKEKWLPVIFSNGDKKKISLRDLLDNRIQDLAYPRADFQGAAWQMLIGILQCTVAPEDKEEWADIWHESIEFEQWEKALNTISLALQFGEQKPSFLQSFDPLDSEYGSIAGLLVDAPGGNALKLNKDHFVKRGNVEQICPHCAAIALFAIQTNSPAGGAGYRVGMRGGGPLTTLVVPQEEDKYPLWKKLWLNVLPQEEPPNVTQHPLIFPWLAPTKTSEKAGNVVTPDNAHPLQAYWGMPRRIELDFTHTVAGICDLCGEHHESLLLQMCSKNYGVQYDSWLHPFSPYRQALKDPSAPWLAFKGQPGGSSYKDWLGLMLNREDKFNKMQPAKVVRAAGQRNKMSLWCFAWDMDKAKVRCWYQHRIPLISVLHEEQFLAALNTVLVLASESLSLLRNALKSAKFDCPKEAKMDFSMVDIAFWQETEPAFRTLQEALAVDPLRQDTQTRHAVSQWEAELAHYLFHVFDRDALTNPDCPDDILQRQLTARQDLASSYRKHKARKDVLALVE
>CP025273.1|QBJ40825.1|1021543_1022146_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MLNSNTAVLCRILHPDAQKALLDWFATLSERYECKDGKRVNGRAWRAELKRMAPPYGVMICEGHDALRQALLKHMRLQPLDEMALALFVSVAVHIKSHKANISFAAQLGEKLKGSTSCVSGLRFERLQKASDPETFCQLLIQAVKIRGTEGVNVLSLADGIFLWMEEWQRRENHQPEFRNPFERNCIRWANEYLSTSRGK

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Crispr_ID: CP025273_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025273_2

1025964-1027578

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

26 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

The CRISPR arrays of CP025273_2

>merge|CP025273|2|1025964-1027578|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGCTGGAACGGCAGTATTTAAAAGGGGTTATTGAGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGGCGCCCGGATTGTTTGCGTGCGGCGACGGGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGATTTACCCGCCACTTATTCCCCATTGCATGTGTTCCCCGCGCCAGCGGGGATAAATCGGGACTATCAAACCATCTATGATGCCAATTTTAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCGGGGCTGGTATTCGATACAGACCCGGCTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGAATAAAAATGAATTTGAGTCAACTCTATAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTAGGCTGCGGTTGGGCACCGAAGAAAAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGATTATCCCGGAAATCGTGATCAACTACGCAGGGTGTTCCCCGCGCCAGCGGGGATAAACCGATTGTTATTGCGGTAACGGATAATTTATCATTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTGGCGATCGCATTTGGGTGCGGGAAACATTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGAATATGGTGATAATGTTGCACCTTCGCTCGTGTTCCCCGCGCCAGCGGGGATAAACCGGACTCGGCCTGTTTTTTGATTTTGACAATCAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCAATAACCGACGAGGGCAAACGCCGTGCGCGGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGACTGAGGGAATAGGGACCGTAATTGTAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATGTTGCGTCTAATTCTCATTAATTAAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGACGAAAATCAGCCCGCATATTCCGACACAGTGTTCCCCGCGCCAGCGGGGATAAACCGAACAGTGGTTTTAGGTTGTCGGTGCTGATCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGATTAAACAACAGGATTTTGCAATTACTGTTGGGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGACGGCAGCAGCGTGAAACACGTCAGTATTGTGTTCCCCGCGCCAGCGGGGATAAACCGTCAGCTGTTCCATACTCACCCCCTGTGCAATCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGATGTATGCCGCGACGATCGAGAGCGAACTGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGCAGATGAAAAATATTTACAGATTGGTAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGAAAAAATCCCGCTGACAATATTTTGCCACCTCGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGAAAACTATCTCTATCGCAGGCTGGATATGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCCAAAGGTACTCCCATATCTCCAGCCAACGGTGTTCCCCGCGCCAGCGGGGATAAACCGTAAGTTACGCCAGTGCGGGCGTGTTGCTCATCGTGTTCCCCGCGCCAGCGGGGATAAACAC

>CP025273|2|2|1025964-1027578|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGAACGGCAGTATTTAAAAGGGGTTATTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGGCGCCCGGATTGTTTGCGTGCGGCGACGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATTTACCCGCCACTTATTCCCCATTGCAT
GTGTTCCCCGCGCCAGCGGGGATAAATCG	GGACTATCAAACCATCTATGATGCCAATTTTAGTG
TTCCCCGCGCCAGCGGGGATAAACCGCGC	GGGGCTGGTATTCGATACAGACCCGGCTAGTG
TTCCCCGCGCCAGCGGGGATAAACCGGGA	ATAAAAATGAATTTGAGTCAACTCTATAAGTG
TTCCCCGCGCCAGCGGGGATAAACCGCGT	TAGGCTGCGGTTGGGCACCGAAGAAAAAAGTG
TTCCCCGCGCCAGCGGGGATAAACCGATT	ATCCCGGAAATCGTGATCAACTACGCAGGGTG
TTCCCCGCGCCAGCGGGGATAAACCGATT	GTTATTGCGGTAACGGATAATTTATCATTGTG
TTCCCCGCGCCAGCGGGGATAAACCGCCT	GGCGATCGCATTTGGGTGCGGGAAACATTGTG
TTCCCCGCGCCAGCGGGGATAAACCGCCG	AATATGGTGATAATGTTGCACCTTCGCTCGTG
TTCCCCGCGCCAGCGGGGATAAACCGGAC	TCGGCCTGTTTTTTGATTTTGACAATCAGGTG
TTCCCCGCGCCAGCGGGGATAAACCGCCA	ATAACCGACGAGGGCAAACGCCGTGCGCGGTG
TTCCCCGCGCCAGCGGGGATAAACCGAGG	ACTGAGGGAATAGGGACCGTAATTGTAAAGTG
TTCCCCGCGCCAGCGGGGATAAACCGACA	ATGTTGCGTCTAATTCTCATTAATTAAAAGTG
TTCCCCGCGCCAGCGGGGATAAACCGCAG	ACGAAAATCAGCCCGCATATTCCGACACAGTG
TTCCCCGCGCCAGCGGGGATAAACCGAAC	AGTGGTTTTAGGTTGTCGGTGCTGATCCCGTG
TTCCCCGCGCCAGCGGGGATAAACCGATT	AAACAACAGGATTTTGCAATTACTGTTGGGTG
TTCCCCGCGCCAGCGGGGATAAACCGCAG	ACGGCAGCAGCGTGAAACACGTCAGTATTGTG
TTCCCCGCGCCAGCGGGGATAAACCGTCA	GCTGTTCCATACTCACCCCCTGTGCAATCGTG
TTCCCCGCGCCAGCGGGGATAAACCGGCG	ATGTATGCCGCGACGATCGAGAGCGAACTGTG
TTCCCCGCGCCAGCGGGGATAAACCGCAG	CAGATGAAAAATATTTACAGATTGGTAAAGTG
TTCCCCGCGCCAGCGGGGATAAACCGAAA	AAATCCCGCTGACAATATTTTGCCACCTCGTG
TTCCCCGCGCCAGCGGGGATAAACCGCCG	GAAAACTATCTCTATCGCAGGCTGGATATGTG
TTCCCCGCGCCAGCGGGGATAAACCGTTC	CAAAGGTACTCCCATATCTCCAGCCAACGGTG
TTCCCCGCGCCAGCGGGGATAAACCGTAA	GTTACGCCAGTGCGGGCGTGTTGCTCATCGTG
TTCCCCGCGCCAGCGGGGATAAACAC

>CP025273|2|2|1025964-1027578|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGAACGGCAGTATTTAAAAGGGGTTATTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGGCGCCCGGATTGTTTGCGTGCGGCGACGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATTTACCCGCCACTTATTCCCCATTGCAT
GTGTTCCCCGCGCCAGCGGGGATAAATCG	GGACTATCAAACCATCTATGATGCCAATTTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGGGGCTGGTATTCGATACAGACCCGGCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAATAAAAATGAATTTGAGTCAACTCTATAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTAGGCTGCGGTTGGGCACCGAAGAAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTATCCCGGAAATCGTGATCAACTACGCAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTGTTATTGCGGTAACGGATAATTTATCATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGGCGATCGCATTTGGGTGCGGGAAACATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAATATGGTGATAATGTTGCACCTTCGCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACTCGGCCTGTTTTTTGATTTTGACAATCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAATAACCGACGAGGGCAAACGCCGTGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGACTGAGGGAATAGGGACCGTAATTGTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAATGTTGCGTCTAATTCTCATTAATTAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGACGAAAATCAGCCCGCATATTCCGACACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGTGGTTTTAGGTTGTCGGTGCTGATCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTAAACAACAGGATTTTGCAATTACTGTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGACGGCAGCAGCGTGAAACACGTCAGTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCAGCTGTTCCATACTCACCCCCTGTGCAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGATGTATGCCGCGACGATCGAGAGCGAACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGCAGATGAAAAATATTTACAGATTGGTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAAATCCCGCTGACAATATTTTGCCACCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGAAAACTATCTCTATCGCAGGCTGGATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCCAAAGGTACTCCCATATCTCCAGCCAACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAGTTACGCCAGTGCGGGCGTGTTGCTCATC
GTGTTCCCCGCGCCAGCGGGGATAAACAC

>CP025273|2|2|1025964-1027578|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGAACGGCAGTATTTAAAAGGGGTTATTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGGCGCCCGGATTGTTTGCGTGCGGCGACGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATTTACCCGCCACTTATTCCCCATTGCAT
GTGTTCCCCGCGCCAGCGGGGATAAATCG	GGACTATCAAACCATCTATGATGCCAATTTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGGGGCTGGTATTCGATACAGACCCGGCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAATAAAAATGAATTTGAGTCAACTCTATAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTAGGCTGCGGTTGGGCACCGAAGAAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTATCCCGGAAATCGTGATCAACTACGCAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTGTTATTGCGGTAACGGATAATTTATCATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGGCGATCGCATTTGGGTGCGGGAAACATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAATATGGTGATAATGTTGCACCTTCGCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACTCGGCCTGTTTTTTGATTTTGACAATCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAATAACCGACGAGGGCAAACGCCGTGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGACTGAGGGAATAGGGACCGTAATTGTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAATGTTGCGTCTAATTCTCATTAATTAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGACGAAAATCAGCCCGCATATTCCGACACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGTGGTTTTAGGTTGTCGGTGCTGATCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTAAACAACAGGATTTTGCAATTACTGTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGACGGCAGCAGCGTGAAACACGTCAGTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCAGCTGTTCCATACTCACCCCCTGTGCAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGATGTATGCCGCGACGATCGAGAGCGAACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGCAGATGAAAAATATTTACAGATTGGTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAAATCCCGCTGACAATATTTTGCCACCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGAAAACTATCTCTATCGCAGGCTGGATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCCAAAGGTACTCCCATATCTCCAGCCAACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAGTTACGCCAGTGCGGGCGTGTTGCTCATC
GTGTTCCCCGCGCCAGCGGGGATAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
CP025273.1\|QBJ40831.1\|1027592_1028639_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP025273.1\|QBJ40839.1\|1033919_1034969_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
CP025273.1\|QBJ40823.1\|1015273_1015516_-\|hypothetical-protein	unknown	unknown	unknown
CP025273.1\|QBJ40827.1\|1023236_1023962_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
CP025273.1\|QBJ44522.1\|1015597_1016551_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
CP025273.1\|QBJ40840.1\|1034949_1035711_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
CP025273.1\|QBJ40833.1\|1029807_1031247_+\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235349
CP025273.1\|QBJ40829.1\|1024665_1025583_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
CP025273.1\|QBJ40822.1\|1014650_1015385_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP025273.1\|QBJ40838.1\|1033443_1033923_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP025273.1\|QBJ40830.1\|1025585_1025879_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
CP025273.1\|QBJ40828.1\|1023961_1024666_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|187795
CP025273.1\|QBJ40835.1\|1031856_1032213_+\|DUF3561-domain-containing-protein	unknown	unknown	gnl\|CDD\|371891
CP025273.1\|QBJ40834.1\|1031233_1031839_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
CP025273.1\|QBJ40837.1\|1032733_1033444_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
CP025273.1\|QBJ40825.1\|1021543_1022146_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
CP025273.1\|QBJ40836.1\|1032403_1032715_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
CP025273.1\|QBJ40826.1\|1022162_1023227_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
CP025273.1\|QBJ40832.1\|1028889_1029798_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP025273.1\|QBJ40824.1\|1019991_1021527_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192

Protein	Function_ID	Function_description	E-value
CP025273.1\|QBJ40831.1\|1027592_1028639_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP025273.1\|QBJ40839.1\|1033919_1034969_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
CP025273.1\|QBJ40833.1\|1029807_1031247_+\|sulfate-adenylyltransferase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
CP025273.1\|QBJ40827.1\|1023236_1023962_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.58885e-47
CP025273.1\|QBJ44522.1\|1015597_1016551_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP025273.1\|QBJ40840.1\|1034949_1035711_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
CP025273.1\|QBJ40829.1\|1024665_1025583_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.73134e-156
CP025273.1\|QBJ40822.1\|1014650_1015385_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.47943e-138
CP025273.1\|QBJ40838.1\|1033443_1033923_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
CP025273.1\|QBJ40830.1\|1025585_1025879_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.50902e-63
CP025273.1\|QBJ40828.1\|1023961_1024666_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|187795	cd09664, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	7.8492e-90
CP025273.1\|QBJ40835.1\|1031856_1032213_+\|DUF3561-domain-containing-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49
CP025273.1\|QBJ40834.1\|1031233_1031839_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
CP025273.1\|QBJ40837.1\|1032733_1033444_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	1.96864e-119
CP025273.1\|QBJ40825.1\|1021543_1022146_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	2.49445e-37
CP025273.1\|QBJ40836.1\|1032403_1032715_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
CP025273.1\|QBJ40826.1\|1022162_1023227_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	2.25497e-121
CP025273.1\|QBJ40832.1\|1028889_1029798_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP025273.1\|QBJ40824.1\|1019991_1021527_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0

>CP025273.1|QBJ40830.1|1025585_1025879_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMLVVVTENVPPRLRGRLVVWLLEIRAGVYVGDVSAKIREMIWQQVSVLADEGNVVMAWATNTESGFEFQTFGVNRRIPVDLDGLRLVSFLPVENQ
>CP025273.1|QBJ40829.1|1024665_1025583_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MSWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGVRTHIPVGSVACIMLEPGTRVSHAAVRLAATVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPSRRSVDQLRGIEGSRVWATYALLAKQYGVKWQGRRYDPKDWEKGDVINQCISSATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFETVVPKAFEIARRNPAEPDRDVRIACRDIFRSGKTLAKLIPLIEDVLAAGEIQPPLPPEDSQPIAIPLPVALGDSGHRST
>CP025273.1|QBJ40828.1|1023961_1024666_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRIQLRFNNLRPEMLAKWNSARPYASHQWLWQLFPEQELRQFLFREEAHGGFFMLSAIPPLLQHTLFLIETKPFNPQLTNGLELDFQLRANPVITRNGKRSDVMMNAKHQAKANGVEKERWWELQQQAAQAWLEQQGQQHGFRLIAPEPDDFAMWAGDEYSELQAHCGCVQAYQQHRFVRKDQETPITFSSVDFSGALCITDAALFKQALFSGLGKSKALGCGMLMVKRKR
>CP025273.1|QBJ40827.1|1023236_1023962_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MKEYLVFQLYAPLASWGEEASGEIRHSATVPTRSALLGLLAAALGIRRDEEARLNNFNQHYHLAVHALASQDRWLRDYHTVGAPRENKKYRYYTRRDELTLAPDEVGTLISQREYRCDGYWHVAISATPDAPHSLSELREALLTPHFPLYLGRKSCPLALPLAARLMTGTLKEVFTHAVEEISAAELSGFTLREGICYWDDPDEESLVWQQKQHSNNQPVSRQRWQFGGYTRFNGPLQERT
>CP025273.1|QBJ40826.1|1022162_1023227_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MIMTTFIQLHLLTAYAPANLNRDESGRPKTAFMGGVERLRVSSQSLKRAWRVSETFEAAMDGFMGKRTRRIGVDYVYRPMKDAGIEEKIAKSSSELIAKQFGKLKSDKDAKPEKNLEIEQIVHVSNHEISLIKQLVDTLIADKREPNDEEVKLLRKEQRSVDMALFGRMLASSPEFNVEAACQVSHALGVSAVTVESDFFTAVDDLNNKEEDAGSGHMGEQGFASALFYTYVCISRDLLVENLGGNEELAKRTIAALTETALTVSPTGKQNSFASRAYATYALAEVGQKQPRSLAAAFFQPVRDTDQIPAAITRLKQQRASFDSVYGNCADDYRELNVQEGTGSLAELLAFVSQ
>CP025273.1|QBJ40825.1|1021543_1022146_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MLNSNTAVLCRILHPDAQKALLDWFATLSERYECKDGKRVNGRAWRAELKRMAPPYGVMICEGHDALRQALLKHMRLQPLDEMALALFVSVAVHIKSHKANISFAAQLGEKLKGSTSCVSGLRFERLQKASDPETFCQLLIQAVKIRGTEGVNVLSLADGIFLWMEEWQRRENHQPEFRNPFERNCIRWANEYLSTSRGK
>CP025273.1|QBJ40824.1|1019991_1021527_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDLTKEKWLPVIFSNGDKKKISLRDLLDNRIQDLAYPRADFQGAAWQMLIGILQCTVAPEDKEEWADIWHESIEFEQWEKALNTISLALQFGEQKPSFLQSFDPLDSEYGSIAGLLVDAPGGNALKLNKDHFVKRGNVEQICPHCAAIALFAIQTNSPAGGAGYRVGMRGGGPLTTLVVPQEEDKYPLWKKLWLNVLPQEEPPNVTQHPLIFPWLAPTKTSEKAGNVVTPDNAHPLQAYWGMPRRIELDFTHTVAGICDLCGEHHESLLLQMCSKNYGVQYDSWLHPFSPYRQALKDPSAPWLAFKGQPGGSSYKDWLGLMLNREDKFNKMQPAKVVRAAGQRNKMSLWCFAWDMDKAKVRCWYQHRIPLISVLHEEQFLAALNTVLVLASESLSLLRNALKSAKFDCPKEAKMDFSMVDIAFWQETEPAFRTLQEALAVDPLRQDTQTRHAVSQWEAELAHYLFHVFDRDALTNPDCPDDILQRQLTARQDLASSYRKHKARKDVLALVE
>CP025273.1|QBJ44522.1|1015597_1016551_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYMLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>CP025273.1|QBJ40823.1|1015273_1015516_-|hypothetical-protein
MLLGTHSLAAFKQLELFWVYDQFKIRLPAGFFIAASIIIPRKDNHPSCSPHSRFSPKNRVSSSAMPGSHLRVVCISPTDR
>CP025273.1|QBJ40822.1|1014650_1015385_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDIHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP025273.1|QBJ40831.1|1027592_1028639_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>CP025273.1|QBJ40832.1|1028889_1029798_+|sulfate-adenylyltransferase-subunit-2
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>CP025273.1|QBJ40833.1|1029807_1031247_+|sulfate-adenylyltransferase
MNTILAQQIANEGGVEAWMMAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWHSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>CP025273.1|QBJ40834.1|1031233_1031839_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>CP025273.1|QBJ40835.1|1031856_1032213_+|DUF3561-domain-containing-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>CP025273.1|QBJ40836.1|1032403_1032715_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>CP025273.1|QBJ40837.1|1032733_1033444_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLADHPQITVVDGGNERADSVLAGLQAVAEAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>CP025273.1|QBJ40838.1|1033443_1033923_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>CP025273.1|QBJ40839.1|1033919_1034969_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALHWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>CP025273.1|QBJ40840.1|1034949_1035711_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP025273_2	2.26\|1027521\|32\|CP025273\|PILER-CR	1027521-1027552	32	NC_004313	Salmonella phage ST64B, complete genome	31961-31992	1	0.969
CP025273_2	2.26\|1027521\|32\|CP025273\|PILER-CR	1027521-1027552	32	KU927493	Salmonella phage 118970_sal3, complete genome	69573-69604	1	0.969
CP025273_2	2.26\|1027521\|32\|CP025273\|PILER-CR	1027521-1027552	32	AY055382	Salmonella typhimurium phage ST64B complete sequence	31961-31992	1	0.969
CP025273_2	2.49\|1027518\|32\|CP025273\|CRISPRCasFinder,CRT	1027518-1027549	32	NC_004313	Salmonella phage ST64B, complete genome	31961-31992	1	0.969
CP025273_2	2.49\|1027518\|32\|CP025273\|CRISPRCasFinder,CRT	1027518-1027549	32	KU927493	Salmonella phage 118970_sal3, complete genome	69573-69604	1	0.969
CP025273_2	2.49\|1027518\|32\|CP025273\|CRISPRCasFinder,CRT	1027518-1027549	32	AY055382	Salmonella typhimurium phage ST64B complete sequence	31961-31992	1	0.969
CP025273_1	1.19\|1009235\|32\|CP025273\|CRISPRCasFinder	1009235-1009266	32	NZ_CP024424	Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence	112052-112083	5	0.844
CP025273_1	1.19\|1009235\|32\|CP025273\|CRISPRCasFinder	1009235-1009266	32	NZ_CP020440	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence	224971-225002	5	0.844
CP025273_1	1.19\|1009235\|32\|CP025273\|CRISPRCasFinder	1009235-1009266	32	NZ_CP044082	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence	90792-90823	5	0.844
CP025273_1	1.21\|1009236\|31\|CP025273\|CRT	1009236-1009266	31	NZ_CP044082	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence	90792-90822	5	0.839
CP025273_1	1.21\|1009236\|31\|CP025273\|CRT	1009236-1009266	31	NZ_CP031080	Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence	271400-271430	5	0.839
CP025273_1	1.21\|1009236\|31\|CP025273\|CRT	1009236-1009266	31	NZ_CP024424	Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence	112053-112083	5	0.839
CP025273_1	1.21\|1009236\|31\|CP025273\|CRT	1009236-1009266	31	NZ_CP020440	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence	224972-225002	5	0.839
CP025273_2	2.10\|1026545\|32\|CP025273\|PILER-CR	1026545-1026576	32	MK448237	Klebsiella phage ST974-OXA48phi18.2, complete genome	10331-10362	5	0.844
CP025273_2	2.33\|1026542\|32\|CP025273\|CRISPRCasFinder,CRT	1026542-1026573	32	MK448237	Klebsiella phage ST974-OXA48phi18.2, complete genome	10331-10362	5	0.844
CP025273_1	1.13\|1008870\|32\|CP025273\|CRISPRCasFinder,CRT,PILER-CR	1008870-1008901	32	MK448383	Streptococcus satellite phage Javan248, complete genome	4976-5007	6	0.812
CP025273_1	1.18\|1009175\|31\|CP025273\|CRISPRCasFinder	1009175-1009205	31	AP014010	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C97-MedDCM-OCT-S27-C11, * SEQUENCING IN PROGRESS *	33568-33598	6	0.806
CP025273_1	1.19\|1009235\|32\|CP025273\|CRISPRCasFinder	1009235-1009266	32	NZ_CP031080	Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence	271400-271431	6	0.812
CP025273_1	1.21\|1009236\|31\|CP025273\|CRT	1009236-1009266	31	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	654403-654433	6	0.806
CP025273_2	2.6\|1026301\|32\|CP025273\|PILER-CR	1026301-1026332	32	MH319741	Marine virus AG-345-E15 Ga0172270_11 genomic sequence	30961-30992	6	0.812
CP025273_2	2.10\|1026545\|32\|CP025273\|PILER-CR	1026545-1026576	32	MK448230	Klebsiella phage ST16-OXA48phi5.2, complete genome	5451-5482	6	0.812
CP025273_2	2.29\|1026298\|32\|CP025273\|CRISPRCasFinder,CRT	1026298-1026329	32	MH319741	Marine virus AG-345-E15 Ga0172270_11 genomic sequence	30961-30992	6	0.812
CP025273_2	2.33\|1026542\|32\|CP025273\|CRISPRCasFinder,CRT	1026542-1026573	32	MK448230	Klebsiella phage ST16-OXA48phi5.2, complete genome	5451-5482	6	0.812
CP025273_1	1.2\|1008199\|32\|CP025273\|CRISPRCasFinder,CRT	1008199-1008230	32	NZ_CP024891	Rhodococcus ruber strain YYL plasmid pYYL1.2, complete sequence	51303-51334	7	0.781
CP025273_1	1.15\|1008992\|32\|CP025273\|CRISPRCasFinder,CRT,PILER-CR	1008992-1009023	32	NZ_CP016366	Phaeobacter porticola strain P97 plasmid pP97_b, complete sequence	126588-126619	7	0.781
CP025273_1	1.15\|1008992\|32\|CP025273\|CRISPRCasFinder,CRT,PILER-CR	1008992-1009023	32	NZ_CP010602	Phaeobacter inhibens strain P83 plasmid pP83_c, complete sequence	115384-115415	7	0.781
CP025273_1	1.15\|1008992\|32\|CP025273\|CRISPRCasFinder,CRT,PILER-CR	1008992-1009023	32	NZ_CP010769	Phaeobacter piscinae strain P13 plasmid pP13_b, complete sequence	133543-133574	7	0.781
CP025273_1	1.15\|1008992\|32\|CP025273\|CRISPRCasFinder,CRT,PILER-CR	1008992-1009023	32	NZ_CP010708	Phaeobacter inhibens strain P66 plasmid pP66_c, complete sequence	115381-115412	7	0.781
CP025273_1	1.15\|1008992\|32\|CP025273\|CRISPRCasFinder,CRT,PILER-CR	1008992-1009023	32	NZ_CP010737	Phaeobacter inhibens strain P72 plasmid pP72_b, complete sequence	183735-183766	7	0.781
CP025273_1	1.19\|1009235\|32\|CP025273\|CRISPRCasFinder	1009235-1009266	32	NC_008826	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	343727-343758	7	0.781
CP025273_1	1.19\|1009235\|32\|CP025273\|CRISPRCasFinder	1009235-1009266	32	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	654402-654433	7	0.781
CP025273_1	1.20\|1009175\|32\|CP025273\|CRT,PILER-CR	1009175-1009206	32	NZ_LR215032	Mycoplasma gallopavonis strain NCTC10186 plasmid 2	4747-4778	7	0.781
CP025273_1	1.20\|1009175\|32\|CP025273\|CRT,PILER-CR	1009175-1009206	32	NZ_LR215032	Mycoplasma gallopavonis strain NCTC10186 plasmid 2	389262-389293	7	0.781
CP025273_1	1.20\|1009175\|32\|CP025273\|CRT,PILER-CR	1009175-1009206	32	AP014010	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C97-MedDCM-OCT-S27-C11, * SEQUENCING IN PROGRESS *	33568-33599	7	0.781
CP025273_1	1.21\|1009236\|31\|CP025273\|CRT	1009236-1009266	31	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	2052295-2052325	7	0.774
CP025273_2	2.6\|1026301\|32\|CP025273\|PILER-CR	1026301-1026332	32	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	294630-294661	7	0.781
CP025273_2	2.21\|1027216\|32\|CP025273\|PILER-CR	1027216-1027247	32	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	304164-304195	7	0.781
CP025273_2	2.21\|1027216\|32\|CP025273\|PILER-CR	1027216-1027247	32	NZ_LT984809	Cupriavidus taiwanensis isolate Cupriavidus taiwanensis STM 8555 plasmid I, complete sequence	194506-194537	7	0.781
CP025273_2	2.29\|1026298\|32\|CP025273\|CRISPRCasFinder,CRT	1026298-1026329	32	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	294630-294661	7	0.781
CP025273_2	2.44\|1027213\|32\|CP025273\|CRISPRCasFinder,CRT	1027213-1027244	32	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	304164-304195	7	0.781
CP025273_2	2.44\|1027213\|32\|CP025273\|CRISPRCasFinder,CRT	1027213-1027244	32	NZ_LT984809	Cupriavidus taiwanensis isolate Cupriavidus taiwanensis STM 8555 plasmid I, complete sequence	194506-194537	7	0.781
CP025273_1	1.8\|1008565\|32\|CP025273\|CRISPRCasFinder,CRT,PILER-CR	1008565-1008596	32	CP047389	Agrobacterium sp. CGMCC 11546 plasmid pA	272606-272637	8	0.75
CP025273_1	1.15\|1008992\|32\|CP025273\|CRISPRCasFinder,CRT,PILER-CR	1008992-1009023	32	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	276525-276556	8	0.75
CP025273_1	1.15\|1008992\|32\|CP025273\|CRISPRCasFinder,CRT,PILER-CR	1008992-1009023	32	AY639599	Bacteriophage TP Ogr (ogr) and putative protease genes, complete cds	1396-1427	8	0.75
CP025273_1	1.16\|1009053\|32\|CP025273\|CRISPRCasFinder,CRT,PILER-CR	1009053-1009084	32	NC_019364	Sulfitobacter guttiformis plasmid pSD118, complete sequence	10703-10734	8	0.75
CP025273_1	1.19\|1009235\|32\|CP025273\|CRISPRCasFinder	1009235-1009266	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	2052295-2052326	8	0.75
CP025273_2	2.21\|1027216\|32\|CP025273\|PILER-CR	1027216-1027247	32	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1756038-1756069	8	0.75
CP025273_2	2.21\|1027216\|32\|CP025273\|PILER-CR	1027216-1027247	32	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	1879010-1879041	8	0.75
CP025273_2	2.44\|1027213\|32\|CP025273\|CRISPRCasFinder,CRT	1027213-1027244	32	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1756038-1756069	8	0.75
CP025273_2	2.44\|1027213\|32\|CP025273\|CRISPRCasFinder,CRT	1027213-1027244	32	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	1879010-1879041	8	0.75
CP025273_1	1.10\|1008687\|32\|CP025273\|CRISPRCasFinder,CRT,PILER-CR	1008687-1008718	32	MN693011	Marine virus AFVG_117M58, complete genome	34901-34932	9	0.719
CP025273_1	1.13\|1008870\|32\|CP025273\|CRISPRCasFinder,CRT,PILER-CR	1008870-1008901	32	MK250029	Prevotella phage Lak-C1, complete genome	220147-220178	9	0.719
CP025273_1	1.13\|1008870\|32\|CP025273\|CRISPRCasFinder,CRT,PILER-CR	1008870-1008901	32	MK250016	Prevotella phage Lak-A1, complete genome	256365-256396	9	0.719
CP025273_1	1.13\|1008870\|32\|CP025273\|CRISPRCasFinder,CRT,PILER-CR	1008870-1008901	32	MK250019	Prevotella phage Lak-A2, complete genome	177499-177530	9	0.719
CP025273_1	1.18\|1009175\|31\|CP025273\|CRISPRCasFinder	1009175-1009205	31	NZ_CP053971	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence	72031-72061	9	0.71
CP025273_1	1.18\|1009175\|31\|CP025273\|CRISPRCasFinder	1009175-1009205	31	NZ_CP013278	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence	3414-3444	9	0.71
CP025273_1	1.18\|1009175\|31\|CP025273\|CRISPRCasFinder	1009175-1009205	31	NC_018509	Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence	232723-232753	9	0.71
CP025273_1	1.18\|1009175\|31\|CP025273\|CRISPRCasFinder	1009175-1009205	31	NZ_CP039724	Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence	129890-129920	9	0.71
CP025273_1	1.18\|1009175\|31\|CP025273\|CRISPRCasFinder	1009175-1009205	31	NZ_CP051859	Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence	109942-109972	9	0.71
CP025273_1	1.18\|1009175\|31\|CP025273\|CRISPRCasFinder	1009175-1009205	31	NZ_CP009347	Bacillus thuringiensis HD1002 plasmid 3, complete sequence	148698-148728	9	0.71
CP025273_1	1.18\|1009175\|31\|CP025273\|CRISPRCasFinder	1009175-1009205	31	NZ_CP045025	Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence	3414-3444	9	0.71
CP025273_2	2.1\|1025993\|32\|CP025273\|PILER-CR,CRISPRCasFinder,CRT	1025993-1026024	32	NZ_CP047227	Moraxella osloensis strain YV1 plasmid p1, complete sequence	115808-115839	9	0.719
CP025273_2	2.2\|1026054\|32\|CP025273\|PILER-CR,CRISPRCasFinder,CRT	1026054-1026085	32	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	616323-616354	9	0.719
CP025273_2	2.2\|1026054\|32\|CP025273\|PILER-CR,CRISPRCasFinder,CRT	1026054-1026085	32	NC_024369	Vibrio phage X29, complete genome	16391-16422	9	0.719
CP025273_2	2.2\|1026054\|32\|CP025273\|PILER-CR,CRISPRCasFinder,CRT	1026054-1026085	32	MK575466	Vibrio phage Rostov 7, complete genome	37606-37637	9	0.719
CP025273_2	2.2\|1026054\|32\|CP025273\|PILER-CR,CRISPRCasFinder,CRT	1026054-1026085	32	KJ545483	Vibrio phage phi 2, complete genome	16391-16422	9	0.719
CP025273_2	2.6\|1026301\|32\|CP025273\|PILER-CR	1026301-1026332	32	MN693555	Marine virus AFVG_25M96, complete genome	8842-8873	9	0.719
CP025273_2	2.6\|1026301\|32\|CP025273\|PILER-CR	1026301-1026332	32	MN693550	Marine virus AFVG_25M93, complete genome	10730-10761	9	0.719
CP025273_2	2.6\|1026301\|32\|CP025273\|PILER-CR	1026301-1026332	32	MN693245	Marine virus AFVG_25M69, complete genome	11115-11146	9	0.719
CP025273_2	2.6\|1026301\|32\|CP025273\|PILER-CR	1026301-1026332	32	MN693208	Marine virus AFVG_25M383, complete genome	25882-25913	9	0.719
CP025273_2	2.6\|1026301\|32\|CP025273\|PILER-CR	1026301-1026332	32	MN693436	Marine virus AFVG_25M57, complete genome	28024-28055	9	0.719
CP025273_2	2.6\|1026301\|32\|CP025273\|PILER-CR	1026301-1026332	32	MN693515	Marine virus AFVG_25M70, complete genome	10467-10498	9	0.719
CP025273_2	2.6\|1026301\|32\|CP025273\|PILER-CR	1026301-1026332	32	MN693320	Marine virus AFVG_25M58, complete genome	28018-28049	9	0.719
CP025273_2	2.6\|1026301\|32\|CP025273\|PILER-CR	1026301-1026332	32	MN693286	Marine virus AFVG_25M92, complete genome	9636-9667	9	0.719
CP025273_2	2.6\|1026301\|32\|CP025273\|PILER-CR	1026301-1026332	32	MN693549	Marine virus AFVG_25M89, complete genome	11533-11564	9	0.719
CP025273_2	2.12\|1026667\|32\|CP025273\|PILER-CR	1026667-1026698	32	NZ_CP013139	Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence	213856-213887	9	0.719
CP025273_2	2.26\|1027521\|32\|CP025273\|PILER-CR	1027521-1027552	32	NZ_CP015221	Rhodococcus sp. PBTS 2 plasmid unnamed1, complete sequence	111308-111339	9	0.719
CP025273_2	2.29\|1026298\|32\|CP025273\|CRISPRCasFinder,CRT	1026298-1026329	32	MN693555	Marine virus AFVG_25M96, complete genome	8842-8873	9	0.719
CP025273_2	2.29\|1026298\|32\|CP025273\|CRISPRCasFinder,CRT	1026298-1026329	32	MN693550	Marine virus AFVG_25M93, complete genome	10730-10761	9	0.719
CP025273_2	2.29\|1026298\|32\|CP025273\|CRISPRCasFinder,CRT	1026298-1026329	32	MN693245	Marine virus AFVG_25M69, complete genome	11115-11146	9	0.719
CP025273_2	2.29\|1026298\|32\|CP025273\|CRISPRCasFinder,CRT	1026298-1026329	32	MN693208	Marine virus AFVG_25M383, complete genome	25882-25913	9	0.719
CP025273_2	2.29\|1026298\|32\|CP025273\|CRISPRCasFinder,CRT	1026298-1026329	32	MN693436	Marine virus AFVG_25M57, complete genome	28024-28055	9	0.719
CP025273_2	2.29\|1026298\|32\|CP025273\|CRISPRCasFinder,CRT	1026298-1026329	32	MN693515	Marine virus AFVG_25M70, complete genome	10467-10498	9	0.719
CP025273_2	2.29\|1026298\|32\|CP025273\|CRISPRCasFinder,CRT	1026298-1026329	32	MN693320	Marine virus AFVG_25M58, complete genome	28018-28049	9	0.719
CP025273_2	2.29\|1026298\|32\|CP025273\|CRISPRCasFinder,CRT	1026298-1026329	32	MN693286	Marine virus AFVG_25M92, complete genome	9636-9667	9	0.719
CP025273_2	2.29\|1026298\|32\|CP025273\|CRISPRCasFinder,CRT	1026298-1026329	32	MN693549	Marine virus AFVG_25M89, complete genome	11533-11564	9	0.719
CP025273_2	2.35\|1026664\|32\|CP025273\|CRISPRCasFinder,CRT	1026664-1026695	32	NZ_CP013139	Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence	213856-213887	9	0.719
CP025273_2	2.49\|1027518\|32\|CP025273\|CRISPRCasFinder,CRT	1027518-1027549	32	NZ_CP015221	Rhodococcus sp. PBTS 2 plasmid unnamed1, complete sequence	111308-111339	9	0.719
CP025273_1	1.6\|1008443\|32\|CP025273\|CRISPRCasFinder,CRT,PILER-CR	1008443-1008474	32	MG945729	UNVERIFIED: Microviridae sp. isolate 2292-1801, complete genome	1763-1794	10	0.688
CP025273_1	1.9\|1008626\|32\|CP025273\|CRISPRCasFinder,CRT,PILER-CR	1008626-1008657	32	MK449008	Streptococcus phage Javan84, complete genome	18935-18966	10	0.688
CP025273_1	1.9\|1008626\|32\|CP025273\|CRISPRCasFinder,CRT,PILER-CR	1008626-1008657	32	MK448832	Streptococcus phage Javan85, complete genome	18935-18966	10	0.688
CP025273_1	1.16\|1009053\|32\|CP025273\|CRISPRCasFinder,CRT,PILER-CR	1009053-1009084	32	AP022645	Bacillus wiedmannii PL1 plasmid pBwiPL1-2 DNA, complete sequence	62931-62962	10	0.688
CP025273_1	1.17\|1009114\|32\|CP025273\|CRISPRCasFinder,CRT,PILER-CR	1009114-1009145	32	NZ_CP024657	Bacillus cereus strain MLY1 plasmid pMLY1.1, complete sequence	129540-129571	10	0.688
CP025273_1	1.17\|1009114\|32\|CP025273\|CRISPRCasFinder,CRT,PILER-CR	1009114-1009145	32	NZ_CP015354	Bacillus thuringiensis strain MYBT18246 plasmid p120416, complete sequence	111984-112015	10	0.688
CP025273_1	1.17\|1009114\|32\|CP025273\|CRISPRCasFinder,CRT,PILER-CR	1009114-1009145	32	NC_047948	Staphylococcus phage phiSA_BS2, complete genome	46996-47027	10	0.688
CP025273_1	1.17\|1009114\|32\|CP025273\|CRISPRCasFinder,CRT,PILER-CR	1009114-1009145	32	MH078572	Staphylococcus phage phiSA_BS1, complete genome	1850-1881	10	0.688
CP025273_1	1.18\|1009175\|31\|CP025273\|CRISPRCasFinder	1009175-1009205	31	NC_011246	Borrelia recurrentis A1 plasmid pl124, complete sequence	78356-78386	10	0.677
CP025273_1	1.20\|1009175\|32\|CP025273\|CRT,PILER-CR	1009175-1009206	32	NC_011246	Borrelia recurrentis A1 plasmid pl124, complete sequence	78355-78386	10	0.688
CP025273_1	1.20\|1009175\|32\|CP025273\|CRT,PILER-CR	1009175-1009206	32	NZ_CP053971	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence	72031-72062	10	0.688
CP025273_1	1.20\|1009175\|32\|CP025273\|CRT,PILER-CR	1009175-1009206	32	NZ_CP013278	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence	3413-3444	10	0.688
CP025273_1	1.20\|1009175\|32\|CP025273\|CRT,PILER-CR	1009175-1009206	32	NC_018509	Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence	232722-232753	10	0.688
CP025273_1	1.20\|1009175\|32\|CP025273\|CRT,PILER-CR	1009175-1009206	32	NZ_CP039724	Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence	129890-129921	10	0.688
CP025273_1	1.20\|1009175\|32\|CP025273\|CRT,PILER-CR	1009175-1009206	32	NZ_CP051859	Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence	109941-109972	10	0.688
CP025273_1	1.20\|1009175\|32\|CP025273\|CRT,PILER-CR	1009175-1009206	32	NZ_CP009347	Bacillus thuringiensis HD1002 plasmid 3, complete sequence	148697-148728	10	0.688
CP025273_1	1.20\|1009175\|32\|CP025273\|CRT,PILER-CR	1009175-1009206	32	NZ_CP045025	Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence	3413-3444	10	0.688
CP025273_2	2.5\|1026240\|32\|CP025273\|PILER-CR	1026240-1026271	32	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	1888410-1888441	10	0.688
CP025273_2	2.5\|1026240\|32\|CP025273\|PILER-CR	1026240-1026271	32	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	1888408-1888439	10	0.688
CP025273_2	2.11\|1026606\|32\|CP025273\|PILER-CR	1026606-1026637	32	MK047641	Phage NV21, complete genome	23610-23641	10	0.688
CP025273_2	2.13\|1026728\|32\|CP025273\|PILER-CR	1026728-1026759	32	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	191710-191741	10	0.688
CP025273_2	2.13\|1026728\|32\|CP025273\|PILER-CR	1026728-1026759	32	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	237223-237254	10	0.688
CP025273_2	2.21\|1027216\|32\|CP025273\|PILER-CR	1027216-1027247	32	NZ_CP021033	Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence	91874-91905	10	0.688
CP025273_2	2.28\|1026237\|32\|CP025273\|CRISPRCasFinder,CRT	1026237-1026268	32	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	1888410-1888441	10	0.688
CP025273_2	2.28\|1026237\|32\|CP025273\|CRISPRCasFinder,CRT	1026237-1026268	32	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	1888408-1888439	10	0.688
CP025273_2	2.34\|1026603\|32\|CP025273\|CRISPRCasFinder,CRT	1026603-1026634	32	MK047641	Phage NV21, complete genome	23610-23641	10	0.688
CP025273_2	2.36\|1026725\|32\|CP025273\|CRISPRCasFinder,CRT	1026725-1026756	32	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	191710-191741	10	0.688
CP025273_2	2.36\|1026725\|32\|CP025273\|CRISPRCasFinder,CRT	1026725-1026756	32	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	237223-237254	10	0.688
CP025273_2	2.44\|1027213\|32\|CP025273\|CRISPRCasFinder,CRT	1027213-1027244	32	NZ_CP021033	Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence	91874-91905	10	0.688

1. spacer 2.26|1027521|32|CP025273|PILER-CR matches to NC_004313 (Salmonella phage ST64B, complete genome) position: , mismatch: 1, identity: 0.969

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

2. spacer 2.26|1027521|32|CP025273|PILER-CR matches to KU927493 (Salmonella phage 118970_sal3, complete genome) position: , mismatch: 1, identity: 0.969

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

3. spacer 2.26|1027521|32|CP025273|PILER-CR matches to AY055382 (Salmonella typhimurium phage ST64B complete sequence) position: , mismatch: 1, identity: 0.969

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

4. spacer 2.49|1027518|32|CP025273|CRISPRCasFinder,CRT matches to NC_004313 (Salmonella phage ST64B, complete genome) position: , mismatch: 1, identity: 0.969

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

5. spacer 2.49|1027518|32|CP025273|CRISPRCasFinder,CRT matches to KU927493 (Salmonella phage 118970_sal3, complete genome) position: , mismatch: 1, identity: 0.969

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

6. spacer 2.49|1027518|32|CP025273|CRISPRCasFinder,CRT matches to AY055382 (Salmonella typhimurium phage ST64B complete sequence) position: , mismatch: 1, identity: 0.969

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

7. spacer 1.19|1009235|32|CP025273|CRISPRCasFinder matches to NZ_CP024424 (Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****.

8. spacer 1.19|1009235|32|CP025273|CRISPRCasFinder matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****.

9. spacer 1.19|1009235|32|CP025273|CRISPRCasFinder matches to NZ_CP044082 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****.

10. spacer 1.21|1009236|31|CP025273|CRT matches to NZ_CP044082 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.839

ggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
agatcgcgctggcggcctcatccg-tgccgca	Protospacer
.**************.* ****** *****.

11. spacer 1.21|1009236|31|CP025273|CRT matches to NZ_CP031080 (Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence) position: , mismatch: 5, identity: 0.839

ggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
agatcgcgctggcggcctcatccg-tgccgca	Protospacer
.**************.* ****** *****.

12. spacer 1.21|1009236|31|CP025273|CRT matches to NZ_CP024424 (Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence) position: , mismatch: 5, identity: 0.839

ggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
agatcgcgctggcggcctcatccg-tgccgca	Protospacer
.**************.* ****** *****.

13. spacer 1.21|1009236|31|CP025273|CRT matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.839

ggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
agatcgcgctggcggcctcatccg-tgccgca	Protospacer
.**************.* ****** *****.

14. spacer 2.10|1026545|32|CP025273|PILER-CR matches to MK448237 (Klebsiella phage ST974-OXA48phi18.2, complete genome) position: , mismatch: 5, identity: 0.844

cctggcgatcgcatttgggtgcgggaaacatt	CRISPR spacer
ccaggcgatcgcatctgggtgcgggaggcctt	Protospacer
** ***********.***********..* **

15. spacer 2.33|1026542|32|CP025273|CRISPRCasFinder,CRT matches to MK448237 (Klebsiella phage ST974-OXA48phi18.2, complete genome) position: , mismatch: 5, identity: 0.844

cctggcgatcgcatttgggtgcgggaaacatt	CRISPR spacer
ccaggcgatcgcatctgggtgcgggaggcctt	Protospacer
** ***********.***********..* **

16. spacer 1.13|1008870|32|CP025273|CRISPRCasFinder,CRT,PILER-CR matches to MK448383 (Streptococcus satellite phage Javan248, complete genome) position: , mismatch: 6, identity: 0.812

taaaaatcttctttcatataaccgtaagggtt	CRISPR spacer
tgaaaatcttctttcatagaaacgtatgtatt	Protospacer
*.**************** ** **** * .**

17. spacer 1.18|1009175|31|CP025273|CRISPRCasFinder matches to AP014010 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C97-MedDCM-OCT-S27-C11, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.806

agcacaatcattattagatgaactt--tcatca	CRISPR spacer
aacacaagaattattagatgaacttggtgat--	Protospacer
*.*****  ****************  * **

18. spacer 1.19|1009235|32|CP025273|CRISPRCasFinder matches to NZ_CP031080 (Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence) position: , mismatch: 6, identity: 0.812

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
cagatcgcgctggcggcctcatccg-tgccgca	Protospacer
 .**************.* ****** *****.

19. spacer 1.21|1009236|31|CP025273|CRT matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 6, identity: 0.806

ggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
ggctcgcgctggcggtcgcttcc-tcggcgcg	Protospacer
** **************** *** *.* **.

20. spacer 2.6|1026301|32|CP025273|PILER-CR matches to MH319741 (Marine virus AG-345-E15 Ga0172270_11 genomic sequence) position: , mismatch: 6, identity: 0.812

ggaataaaaatgaatttgagtcaact-ctataa	CRISPR spacer
ataataaaaaagtatttgagtcaactgatata-	Protospacer
. ******** * *************  ****

21. spacer 2.10|1026545|32|CP025273|PILER-CR matches to MK448230 (Klebsiella phage ST16-OXA48phi5.2, complete genome) position: , mismatch: 6, identity: 0.812

cctggcgatcgcatttgggtgcgggaaacatt	CRISPR spacer
gtcggcgatcgcatctgggtgcgtgaaacatg	Protospacer
 ..***********.******** *******

22. spacer 2.29|1026298|32|CP025273|CRISPRCasFinder,CRT matches to MH319741 (Marine virus AG-345-E15 Ga0172270_11 genomic sequence) position: , mismatch: 6, identity: 0.812

ggaataaaaatgaatttgagtcaact-ctataa	CRISPR spacer
ataataaaaaagtatttgagtcaactgatata-	Protospacer
. ******** * *************  ****

23. spacer 2.33|1026542|32|CP025273|CRISPRCasFinder,CRT matches to MK448230 (Klebsiella phage ST16-OXA48phi5.2, complete genome) position: , mismatch: 6, identity: 0.812

cctggcgatcgcatttgggtgcgggaaacatt	CRISPR spacer
gtcggcgatcgcatctgggtgcgtgaaacatg	Protospacer
 ..***********.******** *******

24. spacer 1.2|1008199|32|CP025273|CRISPRCasFinder,CRT matches to NZ_CP024891 (Rhodococcus ruber strain YYL plasmid pYYL1.2, complete sequence) position: , mismatch: 7, identity: 0.781

cagtgcggcagcgcgcaatcgagacacgccat	CRISPR spacer
cggtgcgacagcgagcaatcgagacgggctct	Protospacer
*.*****.***** ***********. **. *

25. spacer 1.15|1008992|32|CP025273|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016366 (Phaeobacter porticola strain P97 plasmid pP97_b, complete sequence) position: , mismatch: 7, identity: 0.781

gtgcaacagtttcttaccgcaagcagtttgaa	CRISPR spacer
tggcaacagattcttaccgaaagcagataaaa	Protospacer
  ******* ********* ****** * .**

26. spacer 1.15|1008992|32|CP025273|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010602 (Phaeobacter inhibens strain P83 plasmid pP83_c, complete sequence) position: , mismatch: 7, identity: 0.781

gtgcaacagtttcttaccgcaagcagtttgaa	CRISPR spacer
tggcaacagattcttaccacaagcaggcagaa	Protospacer
  ******* ********.******* . ***

27. spacer 1.15|1008992|32|CP025273|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010769 (Phaeobacter piscinae strain P13 plasmid pP13_b, complete sequence) position: , mismatch: 7, identity: 0.781

gtgcaacagtttcttaccgcaagcagtttgaa	CRISPR spacer
tggcaacagattcttaccacaagcaggcagaa	Protospacer
  ******* ********.******* . ***

28. spacer 1.15|1008992|32|CP025273|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010708 (Phaeobacter inhibens strain P66 plasmid pP66_c, complete sequence) position: , mismatch: 7, identity: 0.781

gtgcaacagtttcttaccgcaagcagtttgaa	CRISPR spacer
tggcaacagattcttaccacaagcaggcagaa	Protospacer
  ******* ********.******* . ***

29. spacer 1.15|1008992|32|CP025273|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010737 (Phaeobacter inhibens strain P72 plasmid pP72_b, complete sequence) position: , mismatch: 7, identity: 0.781

gtgcaacagtttcttaccgcaagcagtttgaa	CRISPR spacer
tggcaacagattcttaccacaagcaggcagaa	Protospacer
  ******* ********.******* . ***

30. spacer 1.19|1009235|32|CP025273|CRISPRCasFinder matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 7, identity: 0.781

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gggatcgcggtggcggtcgc-ttcgaggaagtt	Protospacer
********* ********** *.**  *  **

31. spacer 1.19|1009235|32|CP025273|CRISPRCasFinder matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 7, identity: 0.781

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
cggctcgcgctggcggtcgcttcc-tcggcgcg	Protospacer
 ** **************** *** *.* **.

32. spacer 1.20|1009175|32|CP025273|CRT,PILER-CR matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 7, identity: 0.781

agcac-aatcattattagatgaactttcatcaa	CRISPR spacer
-ttacgaaagatttttagatgaacttgcatcaa	Protospacer
  .** **  *** ************ ******

33. spacer 1.20|1009175|32|CP025273|CRT,PILER-CR matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 7, identity: 0.781

agcac-aatcattattagatgaactttcatcaa	CRISPR spacer
-ttacgaaagatttttagatgaacttgcatcaa	Protospacer
  .** **  *** ************ ******

34. spacer 1.20|1009175|32|CP025273|CRT,PILER-CR matches to AP014010 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C97-MedDCM-OCT-S27-C11, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.781

agcacaatcattattagatgaactt--tcatcaa	CRISPR spacer
aacacaagaattattagatgaacttggtgatg--	Protospacer
*.*****  ****************  * **

35. spacer 1.21|1009236|31|CP025273|CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 7, identity: 0.774

ggatcgcgctggcggtcgcatccgttgccgt	CRISPR spacer
ggctcgcgctcgcggtcgcatcctcggcccg	Protospacer
** ******* ************ . ***

36. spacer 2.6|1026301|32|CP025273|PILER-CR matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 7, identity: 0.781

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
tgtataaaaatgaatttgaggtaactccctac	Protospacer
 * ***************** .*****. **

37. spacer 2.21|1027216|32|CP025273|PILER-CR matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 7, identity: 0.781

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
gcgatgtatgccgcgacgattgaatccacgct	Protospacer
********************.**.  *. .**

38. spacer 2.21|1027216|32|CP025273|PILER-CR matches to NZ_LT984809 (Cupriavidus taiwanensis isolate Cupriavidus taiwanensis STM 8555 plasmid I, complete sequence) position: , mismatch: 7, identity: 0.781

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
accattcatgccgcgacgaacaagagcgaaca	Protospacer
.* ** .************ *.*********

39. spacer 2.29|1026298|32|CP025273|CRISPRCasFinder,CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 7, identity: 0.781

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
tgtataaaaatgaatttgaggtaactccctac	Protospacer
 * ***************** .*****. **

40. spacer 2.44|1027213|32|CP025273|CRISPRCasFinder,CRT matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 7, identity: 0.781

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
gcgatgtatgccgcgacgattgaatccacgct	Protospacer
********************.**.  *. .**

41. spacer 2.44|1027213|32|CP025273|CRISPRCasFinder,CRT matches to NZ_LT984809 (Cupriavidus taiwanensis isolate Cupriavidus taiwanensis STM 8555 plasmid I, complete sequence) position: , mismatch: 7, identity: 0.781

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
accattcatgccgcgacgaacaagagcgaaca	Protospacer
.* ** .************ *.*********

42. spacer 1.8|1008565|32|CP025273|CRISPRCasFinder,CRT,PILER-CR matches to CP047389 (Agrobacterium sp. CGMCC 11546 plasmid pA) position: , mismatch: 8, identity: 0.75

caataggacagccattcgagcgcccagagttt	CRISPR spacer
tcacaggacagctattcgagcgcccagtccgt	Protospacer
. *.********.**************  . *

43. spacer 1.15|1008992|32|CP025273|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

gtgcaacagtttcttaccgcaagcagtttgaa	CRISPR spacer
ttgcaacagtttctttccgcatgcagctgctt	Protospacer
 ************** ***** ****.*

44. spacer 1.15|1008992|32|CP025273|CRISPRCasFinder,CRT,PILER-CR matches to AY639599 (Bacteriophage TP Ogr (ogr) and putative protease genes, complete cds) position: , mismatch: 8, identity: 0.75

gtgcaacagtttcttaccgcaagcagtttgaa	CRISPR spacer
gttattcagtttctgaccgccagcagtttgtt	Protospacer
**    ******** ***** *********

45. spacer 1.16|1009053|32|CP025273|CRISPRCasFinder,CRT,PILER-CR matches to NC_019364 (Sulfitobacter guttiformis plasmid pSD118, complete sequence) position: , mismatch: 8, identity: 0.75

atcatcgggattcattttgttgt--ccgggtggc	CRISPR spacer
gtcatcgtgatgcattttgttgtcccctaatg--	Protospacer
.****** *** ***********  ** ..**

46. spacer 1.19|1009235|32|CP025273|CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

gggatcgcgctggcggtcgcatccgttgccgt	CRISPR spacer
cggctcgcgctcgcggtcgcatcctcggcccg	Protospacer
 ** ******* ************ . ***

47. spacer 2.21|1027216|32|CP025273|PILER-CR matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
gaaccttatgccacgacgatcgagaacgaaca	Protospacer
* . . ******.************.*****

48. spacer 2.21|1027216|32|CP025273|PILER-CR matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
gaaccttatgccacgacgatcgagaacgaaca	Protospacer
* . . ******.************.*****

49. spacer 2.44|1027213|32|CP025273|CRISPRCasFinder,CRT matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
gaaccttatgccacgacgatcgagaacgaaca	Protospacer
* . . ******.************.*****

50. spacer 2.44|1027213|32|CP025273|CRISPRCasFinder,CRT matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
gaaccttatgccacgacgatcgagaacgaaca	Protospacer
* . . ******.************.*****

51. spacer 1.10|1008687|32|CP025273|CRISPRCasFinder,CRT,PILER-CR matches to MN693011 (Marine virus AFVG_117M58, complete genome) position: , mismatch: 9, identity: 0.719

aactaacgtctatagctaaatgtagagaaaac	CRISPR spacer
taaaaggttctatagctaaaagtggagaaaat	Protospacer
 *  *.  ************ **.*******.

52. spacer 1.13|1008870|32|CP025273|CRISPRCasFinder,CRT,PILER-CR matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 9, identity: 0.719

taaaaatcttctttcatataaccgtaagggtt	CRISPR spacer
gtattatcttctttcacataacggtaagcaat	Protospacer
  *  ***********.***** ***** . *

53. spacer 1.13|1008870|32|CP025273|CRISPRCasFinder,CRT,PILER-CR matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 9, identity: 0.719

taaaaatcttctttcatataaccgtaagggtt	CRISPR spacer
gtattatcttctttcacataacggtaagcaat	Protospacer
  *  ***********.***** ***** . *

54. spacer 1.13|1008870|32|CP025273|CRISPRCasFinder,CRT,PILER-CR matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 9, identity: 0.719

taaaaatcttctttcatataaccgtaagggtt	CRISPR spacer
gtattatcttctttcacataacggtaagcaat	Protospacer
  *  ***********.***** ***** . *

55. spacer 1.18|1009175|31|CP025273|CRISPRCasFinder matches to NZ_CP053971 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *.

56. spacer 1.18|1009175|31|CP025273|CRISPRCasFinder matches to NZ_CP013278 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *.

57. spacer 1.18|1009175|31|CP025273|CRISPRCasFinder matches to NC_018509 (Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *.

58. spacer 1.18|1009175|31|CP025273|CRISPRCasFinder matches to NZ_CP039724 (Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *.

59. spacer 1.18|1009175|31|CP025273|CRISPRCasFinder matches to NZ_CP051859 (Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *.

60. spacer 1.18|1009175|31|CP025273|CRISPRCasFinder matches to NZ_CP009347 (Bacillus thuringiensis HD1002 plasmid 3, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *.

61. spacer 1.18|1009175|31|CP025273|CRISPRCasFinder matches to NZ_CP045025 (Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *.

62. spacer 2.1|1025993|32|CP025273|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047227 (Moraxella osloensis strain YV1 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

ctggaacggcagtatttaaaaggggttattga	CRISPR spacer
cgtaaacggcagtaattaaaagcggtttgcaa	Protospacer
*  .********** ******* ****  ..*

63. spacer 2.2|1026054|32|CP025273|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 9, identity: 0.719

tgggcgcccggattgtttgcgtgcggcgacgg	CRISPR spacer
ccattggtcggattgtttgcgtgcggggccgg	Protospacer
. . .* .****************** * ***

64. spacer 2.2|1026054|32|CP025273|PILER-CR,CRISPRCasFinder,CRT matches to NC_024369 (Vibrio phage X29, complete genome) position: , mismatch: 9, identity: 0.719

tgggcgcccggattgtttgcgtgcggcgacgg	CRISPR spacer
cccaagcccggcttttttgcgtgcggcgaatg	Protospacer
.  . ****** ** **************  *

65. spacer 2.2|1026054|32|CP025273|PILER-CR,CRISPRCasFinder,CRT matches to MK575466 (Vibrio phage Rostov 7, complete genome) position: , mismatch: 9, identity: 0.719

tgggcgcccggattgtttgcgtgcggcgacgg	CRISPR spacer
cccaagcccggcttttttgcgtgcggcgaatg	Protospacer
.  . ****** ** **************  *

66. spacer 2.2|1026054|32|CP025273|PILER-CR,CRISPRCasFinder,CRT matches to KJ545483 (Vibrio phage phi 2, complete genome) position: , mismatch: 9, identity: 0.719

tgggcgcccggattgtttgcgtgcggcgacgg	CRISPR spacer
cccaagcccggcttttttgcgtgcggcgaatg	Protospacer
.  . ****** ** **************  *

67. spacer 2.6|1026301|32|CP025273|PILER-CR matches to MN693555 (Marine virus AFVG_25M96, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

68. spacer 2.6|1026301|32|CP025273|PILER-CR matches to MN693550 (Marine virus AFVG_25M93, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

69. spacer 2.6|1026301|32|CP025273|PILER-CR matches to MN693245 (Marine virus AFVG_25M69, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

70. spacer 2.6|1026301|32|CP025273|PILER-CR matches to MN693208 (Marine virus AFVG_25M383, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttttaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

71. spacer 2.6|1026301|32|CP025273|PILER-CR matches to MN693436 (Marine virus AFVG_25M57, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

72. spacer 2.6|1026301|32|CP025273|PILER-CR matches to MN693515 (Marine virus AFVG_25M70, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

73. spacer 2.6|1026301|32|CP025273|PILER-CR matches to MN693320 (Marine virus AFVG_25M58, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttttaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

74. spacer 2.6|1026301|32|CP025273|PILER-CR matches to MN693286 (Marine virus AFVG_25M92, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

75. spacer 2.6|1026301|32|CP025273|PILER-CR matches to MN693549 (Marine virus AFVG_25M89, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttttaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

76. spacer 2.12|1026667|32|CP025273|PILER-CR matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 9, identity: 0.719

gactcggcctgttttttgattttgacaatcag	CRISPR spacer
ccgtcggcctgttctttcattttgacttacac	Protospacer
   **********.*** ********   **

77. spacer 2.26|1027521|32|CP025273|PILER-CR matches to NZ_CP015221 (Rhodococcus sp. PBTS 2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

taagttac---gccagtgcgggcgtgttgctcatc	CRISPR spacer
---actgcgcggcgagtgcgggcgcgttgctcatg	Protospacer
   ..*.*   ** **********.*********

78. spacer 2.29|1026298|32|CP025273|CRISPRCasFinder,CRT matches to MN693555 (Marine virus AFVG_25M96, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

79. spacer 2.29|1026298|32|CP025273|CRISPRCasFinder,CRT matches to MN693550 (Marine virus AFVG_25M93, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

80. spacer 2.29|1026298|32|CP025273|CRISPRCasFinder,CRT matches to MN693245 (Marine virus AFVG_25M69, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

81. spacer 2.29|1026298|32|CP025273|CRISPRCasFinder,CRT matches to MN693208 (Marine virus AFVG_25M383, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttttaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

82. spacer 2.29|1026298|32|CP025273|CRISPRCasFinder,CRT matches to MN693436 (Marine virus AFVG_25M57, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

83. spacer 2.29|1026298|32|CP025273|CRISPRCasFinder,CRT matches to MN693515 (Marine virus AFVG_25M70, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

84. spacer 2.29|1026298|32|CP025273|CRISPRCasFinder,CRT matches to MN693320 (Marine virus AFVG_25M58, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttttaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

85. spacer 2.29|1026298|32|CP025273|CRISPRCasFinder,CRT matches to MN693286 (Marine virus AFVG_25M92, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

86. spacer 2.29|1026298|32|CP025273|CRISPRCasFinder,CRT matches to MN693549 (Marine virus AFVG_25M89, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttttaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

87. spacer 2.35|1026664|32|CP025273|CRISPRCasFinder,CRT matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 9, identity: 0.719

gactcggcctgttttttgattttgacaatcag	CRISPR spacer
ccgtcggcctgttctttcattttgacttacac	Protospacer
   **********.*** ********   **

88. spacer 2.49|1027518|32|CP025273|CRISPRCasFinder,CRT matches to NZ_CP015221 (Rhodococcus sp. PBTS 2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

taagttac---gccagtgcgggcgtgttgctcatc	CRISPR spacer
---actgcgcggcgagtgcgggcgcgttgctcatg	Protospacer
   ..*.*   ** **********.*********

89. spacer 1.6|1008443|32|CP025273|CRISPRCasFinder,CRT,PILER-CR matches to MG945729 (UNVERIFIED: Microviridae sp. isolate 2292-1801, complete genome) position: , mismatch: 10, identity: 0.688

aaaataacaacattatcagtgtgaaaagtctc	CRISPR spacer
gcaataacaaccttatcagtgtcaactttaat	Protospacer
. ********* ********** **   *  .

90. spacer 1.9|1008626|32|CP025273|CRISPRCasFinder,CRT,PILER-CR matches to MK449008 (Streptococcus phage Javan84, complete genome) position: , mismatch: 10, identity: 0.688

gtcagtatgcactgcttgataaagtcaggcca	CRISPR spacer
cacagtatggacagcttgataaagttacctgg	Protospacer
  ******* ** ************.*  . .

91. spacer 1.9|1008626|32|CP025273|CRISPRCasFinder,CRT,PILER-CR matches to MK448832 (Streptococcus phage Javan85, complete genome) position: , mismatch: 10, identity: 0.688

gtcagtatgcactgcttgataaagtcaggcca	CRISPR spacer
cacagtatggacagcttgataaagttacctgg	Protospacer
  ******* ** ************.*  . .

92. spacer 1.16|1009053|32|CP025273|CRISPRCasFinder,CRT,PILER-CR matches to AP022645 (Bacillus wiedmannii PL1 plasmid pBwiPL1-2 DNA, complete sequence) position: , mismatch: 10, identity: 0.688

atcatcgggattcattttgttgtccgggtggc	CRISPR spacer
attatcaggattcattttgttgtattcatcaa	Protospacer
**.***.**************** .  .* .

93. spacer 1.17|1009114|32|CP025273|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024657 (Bacillus cereus strain MLY1 plasmid pMLY1.1, complete sequence) position: , mismatch: 10, identity: 0.688

cggtgctctatgtctaaaaataaaagcggttc	CRISPR spacer
tgcatttctatgtcgaaaaataaaaacggcag	Protospacer
.*   .******** **********.***.

94. spacer 1.17|1009114|32|CP025273|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015354 (Bacillus thuringiensis strain MYBT18246 plasmid p120416, complete sequence) position: , mismatch: 10, identity: 0.688

cggtgctctatgtctaaaaataaaagcggttc	CRISPR spacer
tgcatttctatgtcgaaaaataaaaacggcag	Protospacer
.*   .******** **********.***.

95. spacer 1.17|1009114|32|CP025273|CRISPRCasFinder,CRT,PILER-CR matches to NC_047948 (Staphylococcus phage phiSA_BS2, complete genome) position: , mismatch: 10, identity: 0.688

cggtgctctatgtctaaaaataaaagcggttc	CRISPR spacer
tagatacctatgtctaaaaatgaaaggggtat	Protospacer
..*   .**************.**** *** .

96. spacer 1.17|1009114|32|CP025273|CRISPRCasFinder,CRT,PILER-CR matches to MH078572 (Staphylococcus phage phiSA_BS1, complete genome) position: , mismatch: 10, identity: 0.688

cggtgctctatgtctaaaaataaaagcggttc	CRISPR spacer
tagatacctatgtctaaaaatgaaaggggtat	Protospacer
..*   .**************.**** *** .

97. spacer 1.18|1009175|31|CP025273|CRISPRCasFinder matches to NC_011246 (Borrelia recurrentis A1 plasmid pl124, complete sequence) position: , mismatch: 10, identity: 0.677

agcacaatcattattagatgaactttcatca	CRISPR spacer
tcttatggcattattagatgaattttcaaca	Protospacer
  .   . **************.***** **

98. spacer 1.20|1009175|32|CP025273|CRT,PILER-CR matches to NC_011246 (Borrelia recurrentis A1 plasmid pl124, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
tcttatggcattattagatgaattttcaacaa	Protospacer
  .   . **************.***** ***

99. spacer 1.20|1009175|32|CP025273|CRT,PILER-CR matches to NZ_CP053971 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

100. spacer 1.20|1009175|32|CP025273|CRT,PILER-CR matches to NZ_CP013278 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

101. spacer 1.20|1009175|32|CP025273|CRT,PILER-CR matches to NC_018509 (Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

102. spacer 1.20|1009175|32|CP025273|CRT,PILER-CR matches to NZ_CP039724 (Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

103. spacer 1.20|1009175|32|CP025273|CRT,PILER-CR matches to NZ_CP051859 (Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

104. spacer 1.20|1009175|32|CP025273|CRT,PILER-CR matches to NZ_CP009347 (Bacillus thuringiensis HD1002 plasmid 3, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

105. spacer 1.20|1009175|32|CP025273|CRT,PILER-CR matches to NZ_CP045025 (Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

106. spacer 2.5|1026240|32|CP025273|PILER-CR matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgcggggctggtattcgatacagacccggcta	CRISPR spacer
gctcgggctggtattcgattccgacccgcgcc	Protospacer
  . *************** * ******  .

107. spacer 2.5|1026240|32|CP025273|PILER-CR matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgcggggctggtattcgatacagacccggcta	CRISPR spacer
gctcgggctggtattcgattccgacccgcgcc	Protospacer
  . *************** * ******  .

108. spacer 2.11|1026606|32|CP025273|PILER-CR matches to MK047641 (Phage NV21, complete genome) position: , mismatch: 10, identity: 0.688

ccgaatatggtgataatgttgcaccttcgctc	CRISPR spacer
ctacttatggtgataatgtttcaccgtcttgg	Protospacer
*..  *************** **** ** .

109. spacer 2.13|1026728|32|CP025273|PILER-CR matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 10, identity: 0.688

ccaataaccgacgagggcaaacgccgtgcgcg	CRISPR spacer
atcagcgccgacgagggcacccgccgtgcggt	Protospacer
 . *  .************  *********

110. spacer 2.13|1026728|32|CP025273|PILER-CR matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 10, identity: 0.688

ccaataaccgacgagggcaaacgccgtgcgcg	CRISPR spacer
atcagcgccgacgagggcacccgccgtgcggt	Protospacer
 . *  .************  *********

111. spacer 2.21|1027216|32|CP025273|PILER-CR matches to NZ_CP021033 (Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence) position: , mismatch: 10, identity: 0.688

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
tttgtccatgccgcgacgatcgataccgaaaa	Protospacer
 . .* .**************** * ****

112. spacer 2.28|1026237|32|CP025273|CRISPRCasFinder,CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgcggggctggtattcgatacagacccggcta	CRISPR spacer
gctcgggctggtattcgattccgacccgcgcc	Protospacer
  . *************** * ******  .

113. spacer 2.28|1026237|32|CP025273|CRISPRCasFinder,CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgcggggctggtattcgatacagacccggcta	CRISPR spacer
gctcgggctggtattcgattccgacccgcgcc	Protospacer
  . *************** * ******  .

114. spacer 2.34|1026603|32|CP025273|CRISPRCasFinder,CRT matches to MK047641 (Phage NV21, complete genome) position: , mismatch: 10, identity: 0.688

ccgaatatggtgataatgttgcaccttcgctc	CRISPR spacer
ctacttatggtgataatgtttcaccgtcttgg	Protospacer
*..  *************** **** ** .

115. spacer 2.36|1026725|32|CP025273|CRISPRCasFinder,CRT matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 10, identity: 0.688

ccaataaccgacgagggcaaacgccgtgcgcg	CRISPR spacer
atcagcgccgacgagggcacccgccgtgcggt	Protospacer
 . *  .************  *********

116. spacer 2.36|1026725|32|CP025273|CRISPRCasFinder,CRT matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 10, identity: 0.688

ccaataaccgacgagggcaaacgccgtgcgcg	CRISPR spacer
atcagcgccgacgagggcacccgccgtgcggt	Protospacer
 . *  .************  *********

117. spacer 2.44|1027213|32|CP025273|CRISPRCasFinder,CRT matches to NZ_CP021033 (Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence) position: , mismatch: 10, identity: 0.688

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
tttgtccatgccgcgacgatcgataccgaaaa	Protospacer
 . .* .**************** * ****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

678735 : 723886

Cronobacter_phage(66.67%)

terminase,tail,capsid,tRNA,holin,head,portal,integrase

attL 672801:672821|attR 722601:722621

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
672801:672821	attL	NA	NA	NA	NA
QBJ40496.1\|678735_680301_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.7e-12	33.9
QBJ40497.1\|680297_680945_-	PadR family transcriptional regulator	NA	NA	NA	NA
QBJ40498.1\|681176_681944_+	siderophore-interacting protein	NA	NA	NA	NA
QBJ40499.1\|682201_683983_-	ATP-binding protein	X2KLG0	Campylobacter_phage	6.4e-08	23.2
QBJ40500.1\|683972_685010_-\|integrase	integrase	F1BUS9	Erwinia_phage	1.5e-121	63.9
QBJ40501.1\|685013_685580_-	hypothetical protein	Q4ZA70	Staphylococcus_virus	7.5e-19	32.2
QBJ40502.1\|685596_686178_-	phage repressor protein	A0A218M4J1	Erwinia_phage	1.2e-27	37.2
QBJ40503.1\|686321_686543_+	regulator	NA	NA	NA	NA
QBJ40504.1\|686573_687077_+	hypothetical protein	F1BUN6	Cronobacter_phage	3.5e-60	72.5
QBJ40505.1\|687086_687314_+	hypothetical protein	NA	NA	NA	NA
QBJ40506.1\|687303_687729_+	hypothetical protein	F1BUN5	Cronobacter_phage	2.2e-23	49.6
QBJ40507.1\|687728_688130_+	hypothetical protein	F1BUN2	Cronobacter_phage	1.4e-48	66.9
QBJ40508.1\|688197_688431_+	DUF2732 domain-containing protein	NA	NA	NA	NA
QBJ40509.1\|688421_689282_+	adenine methylase	F1BUN1	Cronobacter_phage	1.1e-130	82.0
QBJ40510.1\|689278_691300_+	replication endonuclease	F1BUM9	Cronobacter_phage	7.9e-297	74.5
QBJ40511.1\|691419_691626_+	hypothetical protein	NA	NA	NA	NA
QBJ40512.1\|691599_691923_-	transcriptional regulator	F1BUM8	Cronobacter_phage	8.0e-50	92.3
QBJ40513.1\|691919_692981_-\|portal	phage portal protein	F1BUM7	Cronobacter_phage	6.7e-162	76.8
QBJ40514.1\|692977_694753_-\|terminase	terminase	F1BUM5	Cronobacter_phage	9.8e-291	83.1
QBJ40515.1\|694913_695717_+\|capsid	phage capsid protein	F1BUM4	Cronobacter_phage	2.0e-78	56.0
QBJ40516.1\|695778_696801_+\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	3.9e-159	81.5
QBJ40517.1\|696804_697506_+\|terminase	terminase	F1BUM0	Cronobacter_phage	9.4e-88	66.8
QBJ40518.1\|697551_698055_+\|head	head completion protein	F1BUL8	Cronobacter_phage	1.8e-64	82.7
QBJ40519.1\|698051_698558_+\|tail	phage tail protein	F1BUL7	Cronobacter_phage	1.2e-63	69.1
QBJ40520.1\|698554_699262_+	hypothetical protein	F1BUL6	Cronobacter_phage	1.3e-100	76.1
QBJ40521.1\|699258_700386_+	DUF2586 domain-containing protein	F1BUL5	Cronobacter_phage	1.9e-175	83.7
QBJ40522.1\|700382_700838_+	DUF2597 domain-containing protein	F1BUL4	Cronobacter_phage	1.5e-57	72.2
QBJ40523.1\|700847_701141_+\|holin	holin	C7BGD7	Burkholderia_phage	1.3e-14	46.2
QBJ40524.1\|701137_701479_+	hypothetical protein	F1BUL3	Cronobacter_phage	2.2e-50	91.1
QBJ40525.1\|701478_701811_+	hypothetical protein	F1BUL2	Cronobacter_phage	1.5e-35	70.9
QBJ40526.1\|701782_701971_+	hypothetical protein	F1BUL1	Cronobacter_phage	1.5e-21	77.4
QBJ40527.1\|701957_702215_+	hypothetical protein	A5X9I7	Aeromonas_virus	3.6e-21	63.4
QBJ40528.1\|702402_704373_+\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	3.2e-274	70.8
QBJ40529.1\|704369_704699_+	DUF2590 domain-containing protein	F1BUK8	Cronobacter_phage	3.8e-39	72.4
QBJ40530.1\|704695_705880_+	hypothetical protein	F1BUK6	Cronobacter_phage	6.7e-179	78.4
QBJ40531.1\|705866_706460_+	hypothetical protein	F1BUK5	Cronobacter_phage	5.0e-90	82.6
QBJ40532.1\|706469_708704_+\|tail	phage tail protein	Q8HAB4	Salmonella_phage	7.2e-182	73.7
QBJ40533.1\|708716_709271_+\|tail	tail fiber assembly protein	S4TUB9	Salmonella_phage	2.7e-90	89.0
QBJ40534.1\|709260_709986_+	hypothetical protein	F1BUK1	Cronobacter_phage	3.7e-63	53.5
QBJ40535.1\|709957_710503_+	hypothetical protein	F1BUJ9	Cronobacter_phage	3.2e-59	72.0
QBJ40536.1\|710502_712206_+	hypothetical protein	F1BUJ7	Cronobacter_phage	9.9e-224	81.4
QBJ40537.1\|712986_713172_+	hypothetical protein	NA	NA	NA	NA
QBJ40538.1\|713279_713906_+	reverse transcriptase	NA	NA	NA	NA
QBJ40539.1\|714229_714736_+	mismatch-specific DNA-glycosylase	NA	NA	NA	NA
QBJ40540.1\|714859_716842_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	9.0e-35	33.7
QBJ40541.1\|716856_718602_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	2.1e-72	38.4
QBJ40542.1\|718837_719053_-	30S ribosomal protein S21	NA	NA	NA	NA
QBJ40543.1\|719280_720294_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.8e-109	59.5
QBJ40544.1\|720197_720536_-	hypothetical protein	NA	NA	NA	NA
QBJ40545.1\|720543_721155_-	acyl-phosphate--glycerol-3-phosphate O-acyltransferase	NA	NA	NA	NA
QBJ40546.1\|721261_721621_+	bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase	NA	NA	NA	NA
QBJ40547.1\|721718_722540_+	undecaprenyl-diphosphatase	NA	NA	NA	NA
QBJ40548.1\|722644_723886_-\|tRNA	multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase	A0A0F6YPT7	Sinorhizobium_phage	6.5e-92	47.9
722601:722621	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1202917 : 1267174

Salmonella_phage(88.89%)

tail,capsid,tRNA,head,portal,plate,integrase

attL 1204293:1204340|attR 1238492:1238539

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBJ41012.1\|1202917_1204111_-\|integrase	integrase	A0A1B5FPC6	Escherichia_phage	2.6e-106	49.6
1204293:1204340	attL	NA	NA	NA	NA
QBJ41013.1\|1204455_1205682_-	hypothetical protein	E5G6K9	Salmonella_phage	3.6e-151	65.4
QBJ41014.1\|1205688_1206705_-\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	5.0e-191	95.0
QBJ41015.1\|1206706_1207339_-	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	5.8e-113	96.7
QBJ41016.1\|1207458_1207701_+	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	2.3e-38	98.8
QBJ41017.1\|1207733_1208243_+	hypothetical protein	A0A1S6L008	Salmonella_phage	3.5e-84	93.5
QBJ41018.1\|1208329_1208605_-	hypothetical protein	NA	NA	NA	NA
QBJ44526.1\|1208689_1208884_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	5.3e-25	84.1
QBJ41019.1\|1208847_1209189_+	hypothetical protein	E5G6L5	Salmonella_phage	6.0e-48	84.1
QBJ41020.1\|1209256_1209484_+	DUF2732 domain-containing protein	A0A0M3UL87	Salmonella_phage	8.1e-17	64.0
QBJ41021.1\|1209483_1209711_+	hypothetical protein	E5G6L7	Salmonella_phage	5.4e-21	66.7
QBJ41022.1\|1209707_1210565_+	DNA adenine methylase	E5G6L8	Salmonella_phage	4.6e-113	69.8
QBJ41023.1\|1210561_1212955_+	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	88.8
QBJ41024.1\|1212974_1213202_-	hypothetical protein	NA	NA	NA	NA
QBJ41025.1\|1213339_1213528_+	hypothetical protein	E5G6M0	Salmonella_phage	5.7e-24	91.7
QBJ41026.1\|1213858_1215061_+	DNA (cytosine-5-)-methyltransferase	M1PSQ0	Streptococcus_phage	5.6e-64	37.1
QBJ41027.1\|1215023_1215941_+	restriction endonuclease	NA	NA	NA	NA
QBJ41028.1\|1215987_1217022_-\|portal	phage portal protein	E5G6M3	Salmonella_phage	4.1e-188	94.8
QBJ41029.1\|1217021_1218788_-	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	96.6
QBJ41030.1\|1218930_1219764_+\|capsid	capsid protein	E5G6M5	Salmonella_phage	1.1e-127	97.1
QBJ41031.1\|1219780_1220848_+\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	2.8e-192	98.0
QBJ41032.1\|1220851_1221502_+	hypothetical protein	A0A1S6KZX1	Salmonella_phage	1.6e-113	98.6
QBJ41033.1\|1221595_1222060_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	7.9e-83	96.8
QBJ41034.1\|1222059_1222263_+\|tail	phage tail protein	E5G6M9	Salmonella_phage	3.8e-34	100.0
QBJ41035.1\|1222266_1222482_+	hypothetical protein	E5G6N0	Salmonella_phage	5.9e-33	100.0
QBJ41036.1\|1222462_1222972_+	lysozyme	A0A1S6KZY9	Salmonella_phage	3.2e-93	97.6
QBJ41037.1\|1222976_1223351_+	hypothetical protein	NA	NA	NA	NA
QBJ41038.1\|1223347_1223776_+	hypothetical protein	A0A1S6KZX8	Salmonella_phage	2.6e-64	95.0
QBJ41039.1\|1223871_1224303_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	4.0e-73	95.1
QBJ41040.1\|1224295_1224742_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	3.8e-66	89.7
QBJ41041.1\|1224810_1225389_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.5e-107	99.0
QBJ41042.1\|1225385_1225745_+\|plate	baseplate assembly protein	E5G6N7	Salmonella_phage	6.3e-56	92.4
QBJ41043.1\|1225731_1226640_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	7.2e-157	97.7
QBJ41044.1\|1226632_1227238_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.1e-116	98.5
QBJ41045.1\|1227234_1229043_+	hypothetical protein	A0A1B0V7G4	Salmonella_phage	7.3e-209	82.2
QBJ41046.1\|1229049_1229457_+\|tail	phage tail protein	A0A1B0V844	Salmonella_phage	6.7e-62	85.2
QBJ41047.1\|1229460_1230078_-\|tail	tail assembly chaperone	A0A1B0VCD0	Salmonella_phage	1.6e-94	84.1
QBJ41048.1\|1230047_1230893_-	hypothetical protein	A0A1B0VFW4	Salmonella_phage	1.1e-114	84.4
QBJ41049.1\|1230862_1231420_+	recombinase family protein	A0A1S6L009	Salmonella_phage	9.4e-99	98.9
QBJ41050.1\|1231522_1232695_+\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	3.7e-222	99.5
QBJ41051.1\|1232704_1233220_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	2.7e-92	99.4
QBJ41052.1\|1233274_1233577_+\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	2.5e-45	100.0
QBJ41053.1\|1233591_1233711_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	1.8e-15	100.0
QBJ41054.1\|1233703_1236511_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	98.3
QBJ41055.1\|1236507_1236993_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	8.3e-67	99.2
QBJ41056.1\|1236989_1238090_+	late control protein D	E5G6Q3	Salmonella_phage	9.0e-194	95.6
QBJ41057.1\|1238158_1238377_+	levansucrase regulator	Q53ZE7	Salmonella_virus	2.1e-38	100.0
QBJ44527.1\|1238928_1240092_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
1238492:1238539	attR	NA	NA	NA	NA
QBJ41058.1\|1240099_1242280_-	type I secretion system permease/ATPase	F2Y302	Organic_Lake_phycodnavirus	9.9e-19	34.0
QBJ41059.1\|1242276_1243686_-	type I secretion protein TolC	NA	NA	NA	NA
QBJ41060.1\|1243750_1254916_-	Ig-like domain repeat protein	NA	NA	NA	NA
QBJ44528.1\|1255529_1256012_-	SsrA-binding protein	W5RAM5	Staphylococcus_phage	5.2e-29	47.4
QBJ41061.1\|1256161_1256638_+	ubiquinone-binding protein	NA	NA	NA	NA
QBJ41062.1\|1256627_1256918_+	RnfH family protein	NA	NA	NA	NA
QBJ41063.1\|1257083_1257422_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
QBJ41064.1\|1257570_1259232_-	DNA repair protein RecN	NA	NA	NA	NA
QBJ41065.1\|1259317_1260196_-	NAD(+) kinase	NA	NA	NA	NA
QBJ44529.1\|1260127_1260322_+	molecular chaperone GrpE	NA	NA	NA	NA
QBJ41066.1\|1260318_1260909_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
QBJ41067.1\|1260943_1261549_-	cytoplasmic protein	NA	NA	NA	NA
QBJ41068.1\|1261669_1262911_-	magnesium/cobalt efflux protein	NA	NA	NA	NA
QBJ41069.1\|1262975_1263767_-	inner membrane protein YpjD	NA	NA	NA	NA
QBJ41070.1\|1263712_1264009_-	hypothetical protein	NA	NA	NA	NA
QBJ41071.1\|1263932_1265294_+	signal recognition particle protein	NA	NA	NA	NA
QBJ41072.1\|1265546_1265795_+	30S ribosomal protein S16	NA	NA	NA	NA
QBJ44530.1\|1265813_1266362_+	ribosome maturation factor RimM	NA	NA	NA	NA
QBJ41073.1\|1266406_1267174_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA

DBSCAN-SWA_3

1294178 : 1370924

Salmonella_phage(37.93%)

terminase,tail,head,transposase,protease,tRNA,capsid,lysis,holin,portal,integrase

attL 1286259:1286275|attR 1376771:1376787

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1286259:1286275	attL	NA	NA	NA	NA
QBJ41095.1\|1294178_1295216_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
QBJ41096.1\|1295331_1296021_-	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	4.6e-55	49.5
QBJ41097.1\|1296339_1296723_+	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	6.1e-33	74.0
QBJ41098.1\|1296784_1297372_-	cysteine/O-acetylserine efflux protein	NA	NA	NA	NA
QBJ44532.1\|1297474_1298374_+	LysR family transcriptional regulator	NA	NA	NA	NA
QBJ41099.1\|1298391_1299726_-	ATP-dependent RNA helicase SrmB	A0A1B1IS59	uncultured_Mediterranean_phage	1.6e-43	29.7
QBJ41100.1\|1299855_1300593_+\|tRNA	tRNA (adenosine(37)-N6)-methyltransferase TrmM	NA	NA	NA	NA
QBJ41101.1\|1300577_1302200_-	L-aspartate oxidase	NA	NA	NA	NA
QBJ41102.1\|1302284_1302464_+	hypothetical protein	NA	NA	NA	NA
QBJ41103.1\|1302624_1303200_+	RNA polymerase sigma factor RpoE	NA	NA	NA	NA
QBJ41104.1\|1303231_1303882_+	anti-sigma-E factor RseA	NA	NA	NA	NA
QBJ41105.1\|1303881_1304838_+	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
QBJ41106.1\|1304834_1305314_+	SoxR reducing system protein RseC	NA	NA	NA	NA
QBJ41107.1\|1305343_1305460_+	transcriptional regulator	NA	NA	NA	NA
QBJ41108.1\|1305811_1307041_+\|integrase	integrase	H6WRW7	Salmonella_phage	4.9e-233	94.1
QBJ41109.1\|1307018_1307303_-	excisionase	H6WRW8	Salmonella_phage	3.1e-42	86.2
QBJ41110.1\|1307343_1307583_-	DUF4060 domain-containing protein	S4TR31	Salmonella_phage	2.0e-37	100.0
QBJ41111.1\|1307625_1308783_-	enterohemolysin	S4TTE8	Salmonella_phage	3.9e-216	99.5
QBJ41112.1\|1308745_1311673_-	exodeoxyribonuclease	S4TNL0	Salmonella_phage	0.0e+00	99.2
QBJ41113.1\|1311799_1312150_-	DNA breaking-rejoining protein	S4TSN6	Salmonella_phage	1.1e-60	97.4
QBJ41114.1\|1312171_1312330_-	hypothetical protein	H6WRX3	Salmonella_phage	9.0e-23	98.1
QBJ41115.1\|1312786_1313449_-	hypothetical protein	NA	NA	NA	NA
QBJ41116.1\|1313448_1313835_-	hypothetical protein	NA	NA	NA	NA
QBJ41117.1\|1313827_1314667_-	chromosome partitioning protein ParA	A0A1X9IGI7	Lactococcus_phage	1.5e-31	33.3
QBJ41118.1\|1314725_1315121_-	transcriptional regulator	K7PM35	Enterobacteria_phage	1.9e-37	61.4
QBJ41119.1\|1315220_1315463_+	Rha family transcriptional regulator	A0A0M4QX15	Salmonella_phage	2.1e-23	64.1
QBJ41120.1\|1315422_1315797_+	hypothetical protein	S4TTD7	Salmonella_phage	1.9e-63	98.4
QBJ41121.1\|1315888_1316773_+	replication protein	K7PGT1	Enterobacteria_phage	1.3e-46	47.2
QBJ41122.1\|1316769_1317465_+	phage replication protein	G8C7U6	Escherichia_phage	2.1e-55	45.4
QBJ41123.1\|1317478_1318177_+	DUF550 domain-containing protein	A0A0M4RTV1	Salmonella_phage	2.1e-63	85.7
QBJ41124.1\|1318284_1318917_+	hypothetical protein	NA	NA	NA	NA
QBJ41125.1\|1319159_1319393_+	DinI family protein	H6WRY5	Salmonella_phage	5.6e-37	100.0
QBJ41126.1\|1319509_1319758_+	hypothetical protein	A0A0U2C0C8	Salmonella_phage	1.6e-42	100.0
QBJ41127.1\|1319792_1320395_+	hypothetical protein	S4TTI0	Salmonella_phage	2.8e-109	99.0
QBJ41128.1\|1320394_1320601_+	hypothetical protein	S4TNP0	Salmonella_phage	1.7e-34	97.1
QBJ41129.1\|1320603_1321215_+	protein NinG	A0A0M4RU10	Salmonella_phage	1.8e-90	98.5
QBJ41130.1\|1321211_1321352_+	hypothetical protein	A0A0M5M7B2	Salmonella_phage	7.2e-08	78.9
QBJ41131.1\|1321348_1322026_+	antiterminator	I6PDF8	Cronobacter_phage	7.7e-63	54.0
QBJ41132.1\|1322022_1322208_+	hypothetical protein	NA	NA	NA	NA
QBJ41133.1\|1322298_1322862_+	hypothetical protein	A0A0P0ZC44	Stx2-converting_phage	7.6e-56	92.2
QBJ41134.1\|1323368_1323557_+	hypothetical protein	NA	NA	NA	NA
QBJ41135.1\|1323771_1324458_-\|protease	type III secretion system effector protease GogA	Q9MBM2	Phage_Gifsy-1	9.4e-133	100.0
QBJ44533.1\|1324733_1325063_+\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
QBJ41136.1\|1325046_1325499_+	lysozyme	A0A0M4R365	Salmonella_phage	5.1e-79	97.3
QBJ44534.1\|1325516_1325969_+\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	2.9e-66	92.7
QBJ41137.1\|1326204_1326606_-	inhibitor of g-type lysozyme	NA	NA	NA	NA
QBJ41138.1\|1326640_1326835_+	hypothetical protein	NA	NA	NA	NA
QBJ41139.1\|1326892_1327438_+\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.5e-56	80.6
QBJ41140.1\|1327409_1329341_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	6.3e-259	65.7
QBJ41141.1\|1329324_1329528_+\|tail	phage tail protein	K7PM10	Enterobacteria_phage	1.9e-17	73.8
QBJ41142.1\|1329524_1331105_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	9.6e-189	62.8
QBJ41143.1\|1331094_1332591_+	scaffolding protein	A0A0K2FI53	Enterobacteria_phage	8.1e-97	52.2
QBJ41144.1\|1332603_1332951_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	9.2e-20	52.7
QBJ41145.1\|1333005_1334034_+\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	1.7e-114	61.1
QBJ41146.1\|1334091_1334451_+	DNA packaging protein	NA	NA	NA	NA
QBJ41147.1\|1334461_1334845_+\|tail	phage tail protein	A0A0K2FJB7	Enterobacteria_phage	9.2e-29	55.6
QBJ41148.1\|1334872_1335451_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	3.7e-82	80.2
QBJ41149.1\|1335499_1336750_-\|transposase	transposase	Q9G0F2	Phage_Gifsy-1	7.8e-218	100.0
QBJ41150.1\|1336738_1337140_+\|tail	phage tail protein	Q9G0F3	Phage_Gifsy-1	8.1e-52	100.0
QBJ41151.1\|1337147_1337894_+\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	1.9e-99	76.9
QBJ41152.1\|1337944_1338340_+\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	2.3e-30	56.5
QBJ41153.1\|1338336_1338675_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.3e-31	62.4
QBJ41154.1\|1338646_1341742_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	6.1e-280	62.3
QBJ41155.1\|1341744_1342074_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.3e-42	70.4
QBJ41156.1\|1342083_1342782_+\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	5.5e-104	76.3
QBJ41157.1\|1342788_1343526_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.2e-129	85.0
QBJ41158.1\|1343423_1344071_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.1e-89	77.7
QBJ41159.1\|1344132_1347495_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	79.7
QBJ41160.1\|1347533_1347776_+	hypothetical protein	NA	NA	NA	NA
QBJ41161.1\|1347829_1350202_+\|tail	phage tail protein	A0A0K2FIZ6	Escherichia_phage	1.1e-90	65.6
QBJ41162.1\|1350198_1351023_+\|tail	phage tail protein	A0A0M4QWS3	Salmonella_phage	1.2e-145	92.0
QBJ41163.1\|1351012_1351591_+\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	3.6e-93	88.9
QBJ41164.1\|1351687_1351915_-	phage virulence factor	NA	NA	NA	NA
QBJ41165.1\|1352021_1352234_+	hypothetical protein	S4TTF2	Salmonella_phage	3.8e-08	90.6
QBJ44535.1\|1352296_1352362_+	hypothetical protein	NA	NA	NA	NA
QBJ41166.1\|1353026_1353572_-\|transposase	transposase	NA	NA	NA	NA
QBJ41167.1\|1353818_1353956_-	hypothetical protein	NA	NA	NA	NA
QBJ41168.1\|1354446_1355940_-	type III secretion system protein	Q9MBM1	Phage_Gifsy-1	3.4e-260	100.0
QBJ41169.1\|1356344_1358144_+	elongation factor 4	E4ZFJ7	Streptococcus_phage	7.2e-23	24.9
QBJ41170.1\|1358160_1359135_+	S26 family signal peptidase	NA	NA	NA	NA
QBJ41171.1\|1359408_1360089_+	ribonuclease 3	A0A2K9L5P0	Tupanvirus	7.4e-21	31.8
QBJ41172.1\|1360085_1360991_+	GTPase Era	NA	NA	NA	NA
QBJ41173.1\|1361002_1361731_+	DNA repair protein RecO	NA	NA	NA	NA
QBJ41174.1\|1361742_1362474_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
QBJ41175.1\|1362473_1362854_+	holo-ACP synthase	NA	NA	NA	NA
QBJ41176.1\|1362965_1363226_-	ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	4.9e-18	53.5
QBJ41177.1\|1363263_1364190_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	1.8e-09	24.4
QBJ41178.1\|1364305_1365502_+	MFS transporter	NA	NA	NA	NA
QBJ41179.1\|1365523_1366441_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
QBJ41180.1\|1366479_1367328_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
QBJ41181.1\|1367443_1368337_+	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
QBJ41182.1\|1368347_1369709_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
QBJ41183.1\|1369712_1370348_+	phosphatidylglycerophosphatase C	NA	NA	NA	NA
QBJ41184.1\|1370372_1370924_+\|tRNA	tRNA adenosine(34) deaminase TadA	NA	NA	NA	NA
1376771:1376787	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1814832 : 1824003

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBJ41583.1\|1814832_1815780_+	ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	2.8e-10	27.8
QBJ41584.1\|1815763_1816495_+	ABC transporter permease	NA	NA	NA	NA
QBJ41585.1\|1816475_1816583_-	hypothetical protein	NA	NA	NA	NA
QBJ41586.1\|1816642_1817374_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
QBJ41587.1\|1817596_1819282_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
QBJ41588.1\|1819278_1819998_+	DNA-binding response regulator	NA	NA	NA	NA
QBJ41589.1\|1820044_1820512_+	DUF1456 domain-containing protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
QBJ41590.1\|1820568_1821099_-	lipoprotein	NA	NA	NA	NA
QBJ41591.1\|1821270_1821729_-	lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
QBJ41592.1\|1821969_1824003_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_5

1892094 : 1902601

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBJ41647.1\|1892094_1893498_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.1e-21	26.5
QBJ41648.1\|1893675_1894569_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	4.8e-44	42.2
QBJ41649.1\|1894945_1896031_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.2e-102	53.9
QBJ41650.1\|1896030_1896930_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	5.1e-30	36.0
QBJ44551.1\|1896977_1897856_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	5.1e-107	64.8
QBJ41651.1\|1897856_1898408_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.0e-52	58.0
QBJ41652.1\|1898413_1899388_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
QBJ41653.1\|1899403_1900177_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
QBJ41654.1\|1900181_1901261_+	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	1.3e-16	24.5
QBJ41655.1\|1901287_1902601_+	LPS biosynthesis protein	H8ZJ36	Ostreococcus_tauri_virus	9.1e-52	35.1

DBSCAN-SWA_6

1995733 : 2006383

Morganella_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBJ41745.1\|1995733_1996258_-	peptidase	G9L6C4	Escherichia_phage	1.3e-36	77.7
QBJ41746.1\|1996904_1997195_-	DUF4102 domain-containing protein	B7SYF8	Stenotrophomonas_phage	1.0e-08	50.9
QBJ41747.1\|1997566_1998364_-	protein MtfA	NA	NA	NA	NA
QBJ41748.1\|1998844_1999006_+	hypothetical protein	NA	NA	NA	NA
QBJ41749.1\|1999132_1999552_+	DNA polymerase V subunit UmuD	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
QBJ41750.1\|1999554_2000823_+	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	1.4e-227	92.2
QBJ41751.1\|2001277_2001490_+	cold-shock protein CspJ	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
QBJ44558.1\|2001500_2001689_+	cold-shock protein	NA	NA	NA	NA
QBJ41752.1\|2001946_2003143_-	porin OmpS1	Q1MVN1	Enterobacteria_phage	5.1e-110	56.1
QBJ41753.1\|2003154_2003355_-	hypothetical protein	NA	NA	NA	NA
QBJ41754.1\|2003792_2004104_+	hypothetical protein	NA	NA	NA	NA
QBJ41755.1\|2004183_2004879_+	phosphohydrolase	S4W232	Pandoravirus	2.8e-07	28.0
QBJ41756.1\|2004952_2006383_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4

DBSCAN-SWA_7

2111421 : 2146538

Salmonella_phage(25.0%)

tail,protease,integrase

attL 2113179:2113194|attR 2128212:2128227

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBJ41870.1\|2111421_2112501_-\|integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	8.7e-101	52.5
2113179:2113194	attL	NA	NA	NA	NA
QBJ41871.1\|2113634_2113922_+	lytic enzyme	Q8HA86	Salmonella_phage	8.1e-38	92.7
QBJ41872.1\|2114709_2114877_-	lytic enzyme	NA	NA	NA	NA
QBJ41873.1\|2114941_2115130_-	hypothetical protein	NA	NA	NA	NA
QBJ41874.1\|2115602_2116484_+\|tail	phage tail protein	A0A0M4RTP2	Salmonella_phage	1.4e-64	74.9
QBJ41875.1\|2116580_2116781_-	phage virulence factor	NA	NA	NA	NA
QBJ41876.1\|2116982_2117087_-\|tail	phage tail protein	NA	NA	NA	NA
QBJ41877.1\|2117349_2117475_+	arsenic transporter	NA	NA	NA	NA
QBJ41878.1\|2117603_2117870_+	hypothetical protein	NA	NA	NA	NA
QBJ41879.1\|2118622_2119237_-	disulfide bond formation protein B	NA	NA	NA	NA
QBJ41880.1\|2119246_2119405_-	hypothetical protein	NA	NA	NA	NA
QBJ41881.1\|2119537_2120452_-	protein PagO	NA	NA	NA	NA
QBJ44563.1\|2121069_2121270_+	hypothetical protein	NA	NA	NA	NA
QBJ41882.1\|2121560_2121809_+	hypothetical protein	NA	NA	NA	NA
QBJ41883.1\|2121746_2122115_-\|integrase	integrase	K7PHK0	Enterobacteria_phage	5.4e-18	39.8
QBJ41884.1\|2123578_2123719_-	hypothetical protein	NA	NA	NA	NA
QBJ41885.1\|2123883_2124153_-	hypothetical protein	Q6UAV5	Klebsiella_phage	1.5e-06	39.0
QBJ41886.1\|2124199_2124394_+	hypothetical protein	NA	NA	NA	NA
QBJ41887.1\|2124522_2124942_+	N-acetyltransferase	NA	NA	NA	NA
QBJ41888.1\|2128014_2129028_-	acyltransferase	NA	NA	NA	NA
2128212:2128227	attR	NA	NA	NA	NA
QBJ41889.1\|2129724_2129928_-	fimbrial protein	NA	NA	NA	NA
QBJ41890.1\|2130111_2130396_-	hypothetical protein	NA	NA	NA	NA
QBJ41891.1\|2131555_2131765_+	chemotaxis protein	NA	NA	NA	NA
QBJ41892.1\|2131992_2132469_-	hypothetical protein	NA	NA	NA	NA
QBJ41893.1\|2132784_2133180_-	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	7.0e-16	32.8
QBJ41894.1\|2133863_2134586_+	SPI-1 type III secretion system guanine nucleotide exchange factor SopE2	NA	NA	NA	NA
QBJ41895.1\|2134870_2135035_+	hypothetical protein	NA	NA	NA	NA
QBJ41896.1\|2135258_2135909_+	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	2.7e-57	50.9
QBJ41897.1\|2135927_2136119_-	DUF1482 domain-containing protein	NA	NA	NA	NA
QBJ41898.1\|2136229_2136469_-	DUF1480 domain-containing protein	NA	NA	NA	NA
QBJ44564.1\|2136583_2138023_-	ribosomal RNA small subunit methyltransferase F	NA	NA	NA	NA
QBJ41899.1\|2138100_2140740_-	MCE family protein	NA	NA	NA	NA
QBJ41900.1\|2140702_2141986_-	paraquat-inducible protein A	NA	NA	NA	NA
QBJ41901.1\|2142027_2142612_+	Free methionine-R-sulfoxide reductase	NA	NA	NA	NA
QBJ41902.1\|2142709_2143396_+	RNA chaperone ProQ	NA	NA	NA	NA
QBJ41903.1\|2143415_2145464_+\|tail,protease	tail-specific protease	A0A0R6PIZ1	Moraxella_phage	8.0e-87	33.5
QBJ41904.1\|2145656_2146538_+\|protease	protease HtpX	NA	NA	NA	NA

DBSCAN-SWA_8

2904487 : 3032723

158

Salmonella_phage(51.89%)

terminase,tail,protease,tRNA,lysis,head,holin,portal,integrase

attL 2972080:2972099|attR 3043875:3043894

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBJ44597.1\|2904487_2904808_-	hypothetical protein	E5G6P3	Salmonella_phage	1.2e-08	76.6
QBJ42657.1\|2905025_2905901_+	SPI-2 type III secretion system effector PipB	NA	NA	NA	NA
QBJ42658.1\|2906122_2906803_+\|protease	type III secretion system effector protease PipA	Q9MBM0	Phage_Gifsy-2	9.8e-82	71.0
QBJ42659.1\|2907191_2907458_+	hypothetical protein	A0A0M3ULK3	Salmonella_phage	7.3e-33	78.4
QBJ42660.1\|2907514_2908162_+	hypothetical protein	NA	NA	NA	NA
QBJ44598.1\|2908204_2908402_-	hypothetical protein	S4TTF2	Salmonella_phage	1.4e-09	97.0
QBJ42661.1\|2909027_2909420_-	DUF1353 domain-containing protein	I1TQ41	Pseudomonas_phage	8.5e-14	37.4
QBJ42662.1\|2909529_2910138_-	DUF4376 domain-containing protein	S5MBX6	Escherichia_phage	1.1e-31	44.7
QBJ42663.1\|2910200_2910386_-	hypothetical protein	NA	NA	NA	NA
QBJ42664.1\|2910634_2911153_-\|tail	phage tail protein	A0A0U2QV64	Escherichia_phage	2.0e-47	53.8
QBJ42665.1\|2911167_2912700_-\|tail	phage tail protein	S4TP62	Salmonella_phage	1.4e-128	66.2
QBJ42666.1\|2912699_2913380_-	DUF2612 domain-containing protein	A0A0M5M1K4	Salmonella_phage	5.5e-125	96.0
QBJ42667.1\|2913376_2914576_-	hypothetical protein	A0A0M4RD32	Salmonella_phage	5.5e-213	96.7
QBJ42668.1\|2914576_2914930_-	hypothetical protein	A0A0M4R339	Salmonella_phage	3.0e-58	95.7
QBJ42669.1\|2914929_2915682_-	translation initiation factor IF-2	A0A0M5M1K7	Salmonella_phage	9.7e-91	69.8
QBJ42670.1\|2915800_2916256_+	hypothetical protein	NA	NA	NA	NA
QBJ42671.1\|2916339_2916672_-	hypothetical protein	A0A0M4RTY3	Salmonella_phage	1.7e-23	69.1
QBJ42672.1\|2916668_2917736_-	hypothetical protein	A0A0M4QX01	Salmonella_phage	2.0e-174	91.5
QBJ42673.1\|2917738_2918041_-	hypothetical protein	A0A0M4R5B7	Salmonella_phage	4.2e-53	100.0
QBJ42674.1\|2918040_2918616_-	hypothetical protein	A0A0M3ULD5	Salmonella_phage	2.4e-97	100.0
QBJ42675.1\|2918615_2920625_-	lytic transglycosylase	A0A0M4REK7	Salmonella_phage	0.0e+00	95.2
QBJ44599.1\|2920614_2920791_-	NTP pyrophosphohydrolase	A0A2H4J1A2	uncultured_Caudovirales_phage	4.7e-12	72.9
QBJ42676.1\|2920802_2921255_-	hypothetical protein	A0A0M4S6U8	Salmonella_phage	1.3e-61	78.7
QBJ42677.1\|2921258_2921702_-	DUF3277 domain-containing protein	A0A2H4J619	uncultured_Caudovirales_phage	1.0e-55	74.5
QBJ42678.1\|2921714_2922860_-	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	1.2e-164	75.3
QBJ42679.1\|2922863_2923427_-	hypothetical protein	A0A0M4R331	Salmonella_phage	2.1e-82	78.7
QBJ42680.1\|2923401_2923791_-\|head,tail	head-tail adaptor	A0A0M3ULK0	Salmonella_phage	2.1e-68	98.4
QBJ42681.1\|2923777_2924332_-	hypothetical protein	A0A0M4S631	Salmonella_phage	1.4e-94	99.5
QBJ42682.1\|2924328_2924736_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	3.0e-70	96.3
QBJ42683.1\|2924701_2925091_-	hypothetical protein	A0A0M4RTX5	Salmonella_phage	4.0e-32	62.0
QBJ42684.1\|2925132_2926074_-	hypothetical protein	A0A0M3ULD3	Salmonella_phage	3.1e-179	99.7
QBJ42685.1\|2926085_2926583_-	hypothetical protein	A0A0M4QWZ6	Salmonella_phage	8.7e-88	99.4
QBJ42686.1\|2926587_2927820_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	3.7e-228	99.3
QBJ44600.1\|2927823_2928363_-\|head	phage head morphogenesis protein	A0A0M4REK0	Salmonella_phage	4.5e-82	91.0
QBJ42687.1\|2928454_2929924_-	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	1.3e-280	99.2
QBJ42688.1\|2929923_2931546_-	TerL protein	A0A0M5M1R6	Salmonella_phage	0.0e+00	99.4
QBJ42689.1\|2931548_2932178_-	hypothetical protein	A0A0M3ULJ9	Salmonella_phage	1.5e-108	98.1
QBJ44601.1\|2932678_2933134_-\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	1.3e-53	76.8
QBJ42690.1\|2933451_2933991_-	lysozyme	K7PLY1	Enterobacteria_phage	4.0e-78	74.1
QBJ44602.1\|2933968_2934271_-	alpha/beta hydrolase	NA	NA	NA	NA
QBJ42691.1\|2934473_2934662_-	hypothetical protein	NA	NA	NA	NA
QBJ42692.1\|2935054_2935633_-	DUF1133 domain-containing protein	A0A0U2S606	Escherichia_phage	2.4e-44	52.0
QBJ42693.1\|2935629_2935923_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	2.1e-33	65.3
QBJ42694.1\|2935919_2936516_-	DUF1367 domain-containing protein	H9C173	Pectobacterium_phage	1.5e-81	73.7
QBJ42695.1\|2936584_2936776_-	hypothetical protein	NA	NA	NA	NA
QBJ42696.1\|2936959_2937298_-	hypothetical protein	A0A193GYX4	Enterobacter_phage	3.7e-50	86.6
QBJ42697.1\|2937297_2937468_-	methyltransferase	I6S1S6	Salmonella_phage	6.3e-06	87.5
QBJ42698.1\|2937464_2938067_-	adenine methylase	G9L699	Escherichia_phage	1.7e-98	87.3
QBJ42699.1\|2938059_2938308_-	hypothetical protein	NA	NA	NA	NA
QBJ42700.1\|2938311_2938992_-	hypothetical protein	NA	NA	NA	NA
QBJ42701.1\|2939029_2940418_-	replicative DNA helicase	Q76H51	Enterobacteria_phage	1.2e-105	47.1
QBJ42702.1\|2940414_2941395_-	helix-turn-helix domain-containing protein	H9C164	Pectobacterium_phage	2.3e-44	80.6
QBJ42703.1\|2941397_2941622_-	hypothetical protein	H9C163	Pectobacterium_phage	1.0e-08	44.7
QBJ42704.1\|2941644_2942091_-	hypothetical protein	H9C162	Pectobacterium_phage	5.5e-25	50.4
QBJ44603.1\|2942025_2942241_+	hypothetical protein	NA	NA	NA	NA
QBJ42705.1\|2942155_2942389_-	XRE family transcriptional regulator	A0A0U2S629	Escherichia_phage	6.2e-12	48.6
QBJ42706.1\|2942487_2942952_+	transcriptional regulator	A0A0U2QW76	Escherichia_phage	2.7e-35	51.7
QBJ42707.1\|2943636_2943960_+	hypothetical protein	NA	NA	NA	NA
QBJ42708.1\|2943967_2944213_+	hypothetical protein	A0A1B1W282	Salmonella_phage	3.5e-13	53.8
QBJ42709.1\|2944242_2946507_+	hypothetical protein	H9C157	Pectobacterium_phage	1.5e-102	34.7
QBJ42710.1\|2946503_2947058_+	hypothetical protein	H9C156	Pectobacterium_phage	1.3e-47	59.3
QBJ42711.1\|2947060_2947243_+	hypothetical protein	NA	NA	NA	NA
QBJ42712.1\|2947292_2947490_+	hypothetical protein	H9C154	Pectobacterium_phage	8.3e-10	58.5
QBJ42713.1\|2947455_2947680_+	DUF4224 domain-containing protein	NA	NA	NA	NA
QBJ42714.1\|2947680_2948700_+\|integrase	integrase	A0A192Y7M7	Salmonella_phage	1.2e-91	53.5
QBJ42715.1\|2949287_2949947_+	transmembrane protein	A0A2H4JFM9	uncultured_Caudovirales_phage	2.7e-44	52.4
QBJ42716.1\|2950033_2950363_+	sulfurtransferase TusE	NA	NA	NA	NA
QBJ42717.1\|2950359_2950641_-	acylphosphatase	NA	NA	NA	NA
QBJ42718.1\|2950689_2951469_-	AraC family transcriptional regulator	NA	NA	NA	NA
QBJ42719.1\|2951494_2952043_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
QBJ42720.1\|2952257_2953469_+	ribosomal RNA large subunit methyltransferase I	NA	NA	NA	NA
QBJ42721.1\|2953526_2953844_+	heat-shock protein HspQ	NA	NA	NA	NA
QBJ42722.1\|2953888_2954305_-	CoA-binding protein	NA	NA	NA	NA
QBJ42723.1\|2954475_2955138_+	DUF2057 domain-containing protein	NA	NA	NA	NA
QBJ42724.1\|2955232_2955691_+	methylglyoxal synthase	NA	NA	NA	NA
QBJ42725.1\|2955726_2957781_-	DNA helicase IV	A7KV33	Bacillus_phage	1.1e-19	27.6
QBJ42726.1\|2957904_2958351_+	YccF domain-containing protein	NA	NA	NA	NA
QBJ42727.1\|2958369_2960523_+	TIGR01666 family membrane protein	NA	NA	NA	NA
QBJ42728.1\|2960509_2961115_-	DNA transformation protein	NA	NA	NA	NA
QBJ42729.1\|2961331_2961841_+	cell division inhibitor SulA	NA	NA	NA	NA
QBJ42730.1\|2962197_2963250_+	porin OmpA	NA	NA	NA	NA
QBJ42731.1\|2963321_2963774_-	macrodomain Ter protein	NA	NA	NA	NA
QBJ42732.1\|2963959_2965720_+\|protease	Lon protease family protein	NA	NA	NA	NA
QBJ42733.1\|2965788_2966307_+	beta-hydroxydecanoyl-ACP dehydratase	NA	NA	NA	NA
QBJ42734.1\|2966406_2966574_-	ribosome modulation factor	NA	NA	NA	NA
QBJ42735.1\|2966829_2967393_-	hypothetical protein	NA	NA	NA	NA
QBJ42736.1\|2967389_2969030_-	paraquat-inducible protein B	NA	NA	NA	NA
QBJ42737.1\|2969034_2970288_-	paraquat-inducible protein A	NA	NA	NA	NA
QBJ42738.1\|2970302_2972210_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	2.4e-53	29.8
2972080:2972099	attL	NA	NA	NA	NA
QBJ42739.1\|2972222_2974331_-	ribosomal RNA large subunit methyltransferase K/L	NA	NA	NA	NA
QBJ42740.1\|2974429_2975539_+	hypothetical protein	NA	NA	NA	NA
QBJ42741.1\|2975535_2976078_-	cell division protein ZapC	NA	NA	NA	NA
QBJ42742.1\|2976243_2977254_-	dihydroorotate dehydrogenase (quinone)	NA	NA	NA	NA
QBJ42743.1\|2977461_2980074_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	4.8e-20	22.8
QBJ42744.1\|2980500_2980692_+	DNA-damage-inducible protein I	S4TNM0	Salmonella_phage	6.2e-26	95.2
QBJ42745.1\|2980962_2981649_+	virulence protein	NA	NA	NA	NA
QBJ42746.1\|2981633_2981933_+	hypothetical protein	NA	NA	NA	NA
QBJ42747.1\|2982001_2982628_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.4e-66	63.2
QBJ42748.1\|2983275_2984244_-	SPI-2 type III secretion system effector SseI	Q9MBL9	Phage_Gifsy-2	7.1e-195	100.0
QBJ42749.1\|2984719_2985301_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.7e-95	89.5
QBJ42750.1\|2985300_2987739_-\|tail	phage tail protein	A0A0K2FIZ6	Escherichia_phage	2.9e-91	63.4
QBJ42751.1\|2987792_2988035_-	hypothetical protein	NA	NA	NA	NA
QBJ42752.1\|2988073_2991424_-	host specificity protein J	A0A0K2FI38	Escherichia_phage	0.0e+00	68.6
QBJ42753.1\|2991495_2992200_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	9.2e-67	62.6
QBJ42754.1\|2992097_2992835_-\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	1.6e-114	76.1
QBJ42755.1\|2992844_2993540_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.3e-89	66.7
QBJ42756.1\|2993629_2994163_+	superoxide dismutase [Cu-Zn] SodC1	Q9MC02	Salmonella_phage	1.8e-46	54.0
QBJ42757.1\|2994279_2994777_-	Ail/OmpX	A0A1B0VBR9	Salmonella_phage	1.4e-16	36.6
QBJ42758.1\|2994875_2995208_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	3.3e-35	61.5
QBJ44604.1\|2995204_2998192_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	8.2e-266	62.1
QBJ42759.1\|2998271_2998601_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	5.0e-23	50.9
QBJ42760.1\|2998597_2998996_-\|tail	phage minor tail protein G	K7PLV8	Enterobacteria_phage	8.6e-30	56.8
QBJ42761.1\|2999041_2999791_-\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	3.7e-90	68.6
QBJ42762.1\|2999802_3000204_-\|tail	phage tail protein	K7PHM6	Enterobacterial_phage	1.5e-42	60.9
QBJ42763.1\|3000200_3000767_-\|tail	phage tail protein	Q9G063	Phage_Gifsy-2	9.5e-14	97.8
QBJ42764.1\|3000747_3001047_-	ATP-binding protein	K7PH43	Enterobacteria_phage	4.5e-15	45.1
QBJ42765.1\|3001039_3001363_-	recombinase RecA	K7PLV6	Enterobacteria_phage	7.7e-29	61.3
QBJ44606.1\|3001453_3003535_-	peptidase S14	A0A291AWT6	Escherichia_phage	4.8e-265	69.5
QBJ44605.1\|3003458_3004976_-\|portal	phage portal protein	A0A291AWU2	Escherichia_phage	1.5e-175	65.1
QBJ42766.1\|3005002_3005209_-	primosomal replication protein PriB/PriC domain protein	A0A1W6JT66	Pseudomonas_phage	2.9e-05	53.3
QBJ42767.1\|3005205_3007344_-\|terminase	phage terminase large subunit family protein	A5LH27	Enterobacteria_phage	3.4e-290	72.6
QBJ42768.1\|3007300_3007834_-	DNA breaking-rejoining protein	A0A291AWV8	Escherichia_phage	1.0e-33	48.1
QBJ44608.1\|3008041_3008521_-\|lysis	lysis protein	Q56118	Enterobacteria_phage	1.4e-55	77.0
QBJ42769.1\|3008538_3008991_-	lysozyme	A0A0M4R365	Salmonella_phage	2.3e-79	97.3
QBJ44607.1\|3008974_3009304_-\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
QBJ42770.1\|3009579_3010266_+\|protease	type III secretion system effector protease GtgA	Q9MBM0	Phage_Gifsy-2	2.1e-132	100.0
QBJ42771.1\|3010626_3011076_+	hypothetical protein	NA	NA	NA	NA
QBJ42772.1\|3011211_3011337_-	hypothetical protein	NA	NA	NA	NA
QBJ42773.1\|3011510_3011828_-	hypothetical protein	NA	NA	NA	NA
QBJ42774.1\|3011894_3012692_-	antitermination protein	A0A0M4S661	Salmonella_phage	2.3e-151	99.6
QBJ42775.1\|3012681_3012828_-	hypothetical protein	A0A0M5M7B2	Salmonella_phage	4.3e-19	97.9
QBJ42776.1\|3012824_3013436_-	protein NinG	A0A0M4RU10	Salmonella_phage	6.9e-79	91.6
QBJ42777.1\|3013438_3013645_-	hypothetical protein	S4TNP0	Salmonella_phage	3.5e-35	100.0
QBJ42778.1\|3013644_3014247_-	hypothetical protein	S4TTI0	Salmonella_phage	8.3e-109	98.5
QBJ42779.1\|3014329_3014551_-	hypothetical protein	NA	NA	NA	NA
QBJ42780.1\|3014662_3014896_-	DinI family protein	H6WRY5	Salmonella_phage	2.1e-36	98.7
QBJ42781.1\|3015187_3015478_-	hypothetical protein	NA	NA	NA	NA
QBJ42782.1\|3015555_3015867_-	hypothetical protein	A0A220NQV2	Salmonella_phage	7.2e-32	97.2
QBJ42783.1\|3015863_3016211_-	DNA-binding protein	H6WRX9	Salmonella_phage	5.4e-52	89.6
QBJ42784.1\|3016221_3016971_-	DNA replication protein DnaC	S4TNF5	Salmonella_phage	3.6e-138	99.6
QBJ42785.1\|3016973_3017957_-	hypothetical protein	H6WRX7	Salmonella_phage	1.9e-163	100.0
QBJ42786.1\|3018041_3018416_-	hypothetical protein	S4TTD7	Salmonella_phage	3.9e-64	99.2
QBJ42787.1\|3018381_3018621_-	helix-turn-helix domain-containing protein	H6WRX5	Salmonella_phage	8.3e-12	47.2
QBJ42788.1\|3018740_3019151_+	transcriptional regulator	A0A1B5FPF4	Escherichia_phage	8.1e-07	42.4
QBJ42789.1\|3019200_3019461_+	hypothetical protein	NA	NA	NA	NA
QBJ42790.1\|3019453_3019612_+	hypothetical protein	H6WRX3	Salmonella_phage	1.2e-22	98.1
QBJ42791.1\|3019633_3019933_+	DNA breaking-rejoining protein	S4TSN6	Salmonella_phage	8.1e-49	84.5
QBJ42792.1\|3020059_3022945_+	exodeoxyribonuclease	S4TNL0	Salmonella_phage	0.0e+00	97.3
QBJ42793.1\|3022907_3024065_+	enterohemolysin	S4TTE8	Salmonella_phage	1.6e-217	100.0
QBJ42794.1\|3024107_3024347_+	DUF4060 domain-containing protein	S4TR31	Salmonella_phage	2.0e-37	100.0
QBJ42795.1\|3024387_3024636_+	excisionase	S4TND0	Salmonella_phage	4.7e-42	100.0
QBJ42796.1\|3024680_3025973_+\|integrase	integrase	S4TSP2	Salmonella_phage	1.0e-252	99.8
QBJ42797.1\|3026167_3027370_+	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
QBJ42798.1\|3027450_3028884_-	sodium:alanine symporter family protein	NA	NA	NA	NA
QBJ42799.1\|3029129_3030344_-	diaminopropionate ammonia-lyase	NA	NA	NA	NA
QBJ42800.1\|3030430_3030664_+	hypothetical protein	NA	NA	NA	NA
QBJ42801.1\|3030660_3031122_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
QBJ42802.1\|3031322_3032723_+\|tRNA	asparagine--tRNA ligase	A0A167RLM0	Powai_lake_megavirus	4.5e-81	35.1
3043875:3043894	attR	NA	NA	NA	NA

DBSCAN-SWA_9

3097153 : 3104467

Ralstonia_phage(16.67%)

protease,integrase

attL 3092028:3092042|attR 3103203:3103217

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3092028:3092042	attL	NA	NA	NA	NA
QBJ42851.1\|3097153_3097531_+\|integrase	integrase	A0A077KET4	Ralstonia_phage	5.9e-20	42.7
QBJ42852.1\|3097692_3097890_+	hypothetical protein	NA	NA	NA	NA
QBJ42853.1\|3098103_3100380_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
QBJ42854.1\|3100410_3100731_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
QBJ42855.1\|3101054_3101276_+	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
QBJ42856.1\|3101230_3101425_-	hypothetical protein	NA	NA	NA	NA
QBJ42857.1\|3101405_3103352_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	9.1e-40	42.3
3103203:3103217	attR	NA	NA	NA	NA
QBJ42858.1\|3103348_3104467_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.8e-08	38.9

DBSCAN-SWA_10

3180317 : 3265802

106

Salmonella_phage(38.24%)

head,tail,terminase,protease,lysis,coat,portal,integrase

attL 3228664:3228688|attR 3265868:3265892

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBJ42928.1\|3180317_3180833_-\|protease	outer membrane protease	A5LH44	Enterobacteria_phage	1.1e-16	34.2
QBJ42929.1\|3181186_3182074_+	threonine/homoserine exporter RhtA	NA	NA	NA	NA
QBJ42930.1\|3182376_3182880_+	DNA starvation/stationary phase protection protein	A0A222YYG6	Streptomyces_phage	7.1e-05	23.0
QBJ42931.1\|3183356_3184103_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA
QBJ42932.1\|3184248_3184908_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA
QBJ42933.1\|3184904_3185627_+	glutamine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.9e-35	43.2
QBJ42934.1\|3185745_3187968_+	mechanosensitive channel protein	NA	NA	NA	NA
QBJ42935.1\|3187964_3188891_-	ribosomal RNA large subunit methyltransferase F	NA	NA	NA	NA
QBJ42936.1\|3189095_3189362_+	DksA/TraR family C4-type zinc finger protein	E5E4B1	Acinetobacter_phage	2.2e-13	52.8
QBJ42937.1\|3189646_3189907_+	hypothetical protein	NA	NA	NA	NA
QBJ42938.1\|3190062_3191037_-	DNA-binding protein YbiB	NA	NA	NA	NA
QBJ42939.1\|3191066_3193211_-	ATP-dependent helicase DinG	A0A127AW80	Bacillus_phage	7.4e-43	26.7
QBJ42940.1\|3193418_3194780_-	ATP-dependent RNA helicase RhlE	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	2.9e-53	34.2
QBJ42941.1\|3195009_3195684_+	transcriptional regulator	NA	NA	NA	NA
QBJ42942.1\|3195683_3196679_+	secretion protein HlyD	NA	NA	NA	NA
QBJ42943.1\|3196671_3198408_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.3e-18	30.3
QBJ42944.1\|3198400_3199531_+	ABC transporter permease	NA	NA	NA	NA
QBJ42945.1\|3199646_3200753_+	ABC transporter permease	NA	NA	NA	NA
QBJ42946.1\|3200714_3201125_-	hypothetical protein	NA	NA	NA	NA
QBJ42947.1\|3201257_3202016_+	EEP domain-containing protein	NA	NA	NA	NA
QBJ42948.1\|3202012_3203254_+	cardiolipin synthase B	NA	NA	NA	NA
QBJ42949.1\|3203253_3204216_+	lysylphosphatidylglycerol synthetase family protein	NA	NA	NA	NA
QBJ42950.1\|3204218_3204779_-	hypothetical protein	NA	NA	NA	NA
QBJ42951.1\|3204786_3205395_-	hypothetical protein	NA	NA	NA	NA
QBJ42952.1\|3205418_3206126_-	hypothetical protein	NA	NA	NA	NA
QBJ42953.1\|3206271_3206976_-	BAX inhibitor (BI)-1/YccA family protein	NA	NA	NA	NA
QBJ42954.1\|3207023_3207476_-	molybdopterin synthase catalytic subunit	NA	NA	NA	NA
QBJ42955.1\|3207477_3207729_-	molybdopterin synthase sulfur carrier subunit	NA	NA	NA	NA
QBJ42956.1\|3207715_3208201_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA
QBJ42957.1\|3208203_3208716_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA
QBJ42958.1\|3208737_3209727_-	cyclic pyranopterin monophosphate synthase	NA	NA	NA	NA
QBJ42959.1\|3210123_3211032_+	hypothetical protein	A1IMD5	Streptococcus_phage	6.0e-26	29.9
QBJ42960.1\|3211123_3213391_-	SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP	Q9MBL9	Phage_Gifsy-2	4.1e-15	42.1
QBJ42961.1\|3213398_3213572_-	hypothetical protein	NA	NA	NA	NA
QBJ42962.1\|3213880_3215902_-	excinuclease ABC subunit B	NA	NA	NA	NA
QBJ42963.1\|3215898_3216126_-	hypothetical protein	NA	NA	NA	NA
QBJ42964.1\|3216552_3217239_-	dethiobiotin synthase	NA	NA	NA	NA
QBJ42965.1\|3217231_3217987_-	malonyl-[acyl-carrier protein] O-methyltransferase BioC	NA	NA	NA	NA
QBJ42966.1\|3217970_3219128_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA
QBJ42967.1\|3219124_3220165_-	biotin synthase	NA	NA	NA	NA
QBJ42968.1\|3220251_3221541_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	7.7e-19	28.5
QBJ42969.1\|3221598_3222075_+	kinase inhibitor	NA	NA	NA	NA
QBJ42970.1\|3222159_3223680_-	histidine ammonia-lyase	A0A1V0S940	Catovirus	1.7e-81	40.0
QBJ42971.1\|3223681_3225367_-	urocanate hydratase	NA	NA	NA	NA
QBJ42972.1\|3225563_3226289_-	histidine utilization repressor	NA	NA	NA	NA
QBJ42973.1\|3226333_3227275_-	formimidoylglutamase	NA	NA	NA	NA
QBJ42974.1\|3227271_3228495_-	imidazolonepropionase	NA	NA	NA	NA
3228664:3228688	attL	NA	NA	NA	NA
QBJ42975.1\|3228956_3230813_-\|tail	phage tail protein	S4TVJ1	Salmonella_phage	2.3e-274	90.1
QBJ42976.1\|3230850_3231081_-	hypothetical protein	NA	NA	NA	NA
QBJ42977.1\|3231097_3233089_-	DNA transfer protein	A0A1R3Y5Q1	Salmonella_virus	0.0e+00	96.6
QBJ42978.1\|3233088_3234384_-	acyltransferase	Q716G3	Shigella_phage	2.1e-181	84.0
QBJ42979.1\|3234393_3235086_-	DNA transfer protein	G5DA80	Enterobacteria_phage	2.7e-111	99.6
QBJ42980.1\|3235088_3235544_-	hypothetical protein	I1TEJ3	Salmonella_phage	4.4e-86	98.7
QBJ42981.1\|3235543_3236245_-\|tail	phage tail protein	C6ZR14	Salmonella_phage	4.7e-71	92.3
QBJ42982.1\|3236248_3237667_-	hypothetical protein	A0A075B8I2	Enterobacteria_phage	3.9e-274	98.3
QBJ42983.1\|3237676_3238138_-\|head	head DNA stabilization protein	A5VW70	Enterobacteria_phage	7.1e-84	100.0
QBJ42984.1\|3238118_3238307_-	hypothetical protein	A5VW71	Enterobacteria_phage	2.9e-28	100.0
QBJ42985.1\|3238348_3239602_-\|coat	coat protein	A0A088CQ56	Enterobacteria_phage	1.0e-233	98.3
QBJ42986.1\|3239620_3240514_-	scaffolding protein	A0A088CPT0	Enterobacteria_phage	2.6e-114	84.2
QBJ42987.1\|3240604_3242803_-\|portal	portal protein	A0A088CQ69	Enterobacteria_phage	0.0e+00	97.3
QBJ42988.1\|3242804_3244220_-\|terminase	PBSX family phage terminase large subunit	A5VW75	Enterobacteria_phage	3.2e-276	99.2
QBJ44615.1\|3244216_3244639_-	ubiquitin carboxyl-hydrolase	Q716H4	Shigella_phage	3.6e-74	99.3
QBJ42989.1\|3244662_3244842_-	hypothetical protein	Q9AZ02	Salmonella_phage	2.1e-23	93.2
QBJ42990.1\|3244843_3245086_-	hypothetical protein	A0A0M4R322	Salmonella_phage	8.3e-36	98.8
QBJ42991.1\|3245381_3245909_-	DUF2829 domain-containing protein	A0A1B0VMG3	Pseudomonas_phage	3.3e-45	54.6
QBJ42992.1\|3245987_3246425_-\|lysis	lysis protein	A0A2I6PIF7	Escherichia_phage	6.5e-71	97.9
QBJ44616.1\|3246513_3247011_-	lysozyme	I6R0P2	Salmonella_phage	9.9e-92	100.0
QBJ42993.1\|3246988_3247192_-	hypothetical protein	I6R0S9	Salmonella_phage	1.1e-33	100.0
QBJ42994.1\|3247655_3248174_-	antiterminator	Q716B8	Shigella_phage	2.2e-94	98.8
QBJ42995.1\|3248164_3248836_-	serine/threonine protein phosphatase	Q5TJL8	Enterobacteria_phage	2.0e-127	95.5
QBJ42996.1\|3248832_3249441_-	protein NinG	I6S604	Salmonella_phage	2.9e-93	95.0
QBJ42997.1\|3249415_3249595_-	NinF family protein	I6R994	Salmonella_phage	1.1e-27	94.9
QBJ42998.1\|3249591_3249768_-	NinE family protein	Q5G8S3	Enterobacteria_phage	3.0e-27	100.0
QBJ42999.1\|3249734_3249908_-	protein ninD	C6ZR56	Salmonella_phage	5.2e-32	100.0
QBJ43000.1\|3249904_3250342_-	recombination protein NinB	A0A192Y6T2	Salmonella_phage	9.4e-78	98.6
QBJ43001.1\|3250356_3250563_-	hypothetical protein	I1TEG6	Salmonella_phage	2.7e-35	98.5
QBJ43002.1\|3250566_3250818_-	hypothetical protein	A0A220NQX3	Salmonella_phage	2.9e-23	65.5
QBJ43003.1\|3250829_3251030_-	hypothetical protein	Q716C9	Shigella_phage	4.6e-32	100.0
QBJ43004.1\|3251026_3251353_-	hypothetical protein	Q716D0	Shigella_phage	4.2e-59	99.1
QBJ43005.1\|3251425_3251695_-	hypothetical protein	G9L682	Escherichia_phage	1.9e-44	98.9
QBJ43006.1\|3251691_3251982_-	hypothetical protein	K7PH23	Enterobacteria_phage	2.5e-50	100.0
QBJ43007.1\|3251978_3252824_-	ATP-binding protein	K7PLU3	Enterobacteria_phage	2.1e-110	73.6
QBJ43008.1\|3252826_3253669_-	replication protein	K7PGT1	Enterobacteria_phage	1.0e-128	94.2
QBJ43009.1\|3253655_3254300_-	hypothetical protein	NA	NA	NA	NA
QBJ44617.1\|3254334_3254613_-	hypothetical protein	Q8VNP9	Enterobacteria_phage	3.6e-43	100.0
QBJ43010.1\|3254721_3254916_-	Cro/Cl family transcriptional regulator	K7PLQ6	Enterobacteria_phage	1.8e-28	100.0
QBJ43011.1\|3255022_3255739_+	helix-turn-helix domain-containing protein	K7PGR7	Enterobacteria_phage	9.2e-123	100.0
QBJ43012.1\|3255757_3256126_+	hypothetical protein	K7PJJ3	Enterobacteria_phage	1.3e-56	100.0
QBJ43013.1\|3256493_3256799_+	hypothetical protein	A5VW99	Enterobacteria_phage	1.3e-25	92.8
QBJ43014.1\|3257069_3257264_+	restriction endonuclease	A0A2H4FS18	Salmonella_phage	2.5e-30	100.0
QBJ44618.1\|3257347_3258358_+	hypothetical protein	Q5G8T6	Enterobacteria_phage	7.2e-73	80.4
QBJ43015.1\|3258552_3258726_+\|protease	protease FtsH-inhibitory lysogeny factor CIII	I6R987	Salmonella_phage	8.9e-24	100.0
QBJ43016.1\|3258706_3258895_+	protein kil	I6S647	Salmonella_phage	3.7e-31	100.0
QBJ43017.1\|3259024_3259732_+	recombinase	B8K1D9	Salmonella_phage	6.7e-134	96.2
QBJ43018.1\|3259732_3260191_+	single-stranded DNA-binding protein	C6ZR36	Salmonella_phage	2.6e-70	89.0
QBJ43019.1\|3260199_3260679_+	hypothetical protein	Q716E9	Shigella_phage	1.6e-86	91.2
QBJ43020.1\|3260687_3261236_+	3'-5' exoribonuclease	C6ZR35	Salmonella_phage	2.1e-106	100.0
QBJ43021.1\|3261251_3261545_+	RecBCD nuclease inhibitor	A0A1V0E5L7	Salmonella_phage	5.5e-50	100.0
QBJ43022.1\|3261555_3261729_+	DUF2737 domain-containing protein	A0A2H4FUQ1	Salmonella_phage	2.1e-25	96.5
QBJ44619.1\|3261740_3262265_+	hypothetical protein	Q5G8U6	Enterobacteria_phage	1.6e-39	64.8
QBJ43023.1\|3262261_3262858_+	hypothetical protein	A0A2H4FRZ0	Salmonella_phage	8.7e-42	55.2
QBJ43024.1\|3262859_3263078_+	sugar acetyltransferase inhibitor	C6ZR28	Salmonella_phage	7.0e-34	97.2
QBJ43025.1\|3263081_3263315_+	hypothetical protein	A0A1V0E5L6	Salmonella_phage	6.0e-15	91.1
QBJ43026.1\|3263384_3264359_+	hypothetical protein	Q5G8V2	Enterobacteria_phage	5.2e-28	44.0
QBJ43027.1\|3264535_3264754_+	excisionase	A0A1V0E5M4	Salmonella_phage	5.7e-36	100.0
QBJ43028.1\|3264731_3265802_+\|integrase	integrase	A0A1V0E5M7	Salmonella_phage	3.0e-154	99.6
3265868:3265892	attR	NA	NA	NA	NA

DBSCAN-SWA_11

4493377 : 4538153

Burkholderia_phage(40.91%)

tail,tRNA,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBJ44114.1\|4493377_4494376_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
QBJ44115.1\|4494463_4495774_-	conjugal transfer protein	NA	NA	NA	NA
QBJ44116.1\|4496020_4496536_+	transcriptional regulator Zur	NA	NA	NA	NA
QBJ44117.1\|4496635_4496845_-	CsbD family protein	NA	NA	NA	NA
QBJ44674.1\|4496866_4496980_-	hypothetical protein	NA	NA	NA	NA
QBJ44118.1\|4496976_4498302_-	MATE family efflux transporter	NA	NA	NA	NA
QBJ44119.1\|4498480_4499089_-	LexA repressor	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
QBJ44120.1\|4499197_4499566_-	diacylglycerol kinase	NA	NA	NA	NA
QBJ44121.1\|4499736_4502157_+	glycerol-3-phosphate 1-O-acyltransferase	NA	NA	NA	NA
QBJ44122.1\|4502255_4503128_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
QBJ44123.1\|4503141_4503639_-	chorismate--pyruvate lyase	NA	NA	NA	NA
QBJ44124.1\|4503819_4504737_-	maltose operon protein MalM	NA	NA	NA	NA
QBJ44125.1\|4504900_4506259_-	maltoporin	NA	NA	NA	NA
QBJ44126.1\|4506347_4507457_-	maltose/maltodextrin import ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
QBJ44127.1\|4507818_4509009_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
QBJ44128.1\|4509140_4510685_+	maltose ABC transporter permease MalF	NA	NA	NA	NA
QBJ44129.1\|4510699_4511590_+	maltose ABC transporter permease	NA	NA	NA	NA
QBJ44130.1\|4511755_4512166_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
QBJ44131.1\|4512308_4514405_-	YjbH domain-containing protein	NA	NA	NA	NA
QBJ44132.1\|4514404_4515142_-	hypothetical protein	NA	NA	NA	NA
QBJ44133.1\|4515138_4515777_-	YjbF family lipoprotein	NA	NA	NA	NA
QBJ44134.1\|4515840_4516083_-	outer membrane protein	NA	NA	NA	NA
QBJ44135.1\|4516526_4518176_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
QBJ44136.1\|4518520_4519870_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
QBJ44137.1\|4520000_4520348_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5
QBJ44138.1\|4520925_4521213_+	hypothetical protein	Q6QIC8	Burkholderia_phage	2.3e-16	49.1
QBJ44139.1\|4521215_4521821_+	lytic transglycosylase domain-containing protein	Q5ZQZ1	Pseudomonas_phage	2.5e-60	59.9
QBJ44140.1\|4521833_4522148_+	hypothetical protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
QBJ44141.1\|4522307_4522763_+	hypothetical protein	NA	NA	NA	NA
QBJ44142.1\|4522759_4522957_+	hypothetical protein	Q6QIB1	Burkholderia_phage	8.6e-07	52.9
QBJ44143.1\|4522946_4524374_+\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	1.8e-194	70.9
QBJ44144.1\|4524373_4524898_+\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	2.8e-68	69.5
QBJ44145.1\|4524949_4525267_+\|tail	phage tail assembly protein	NA	NA	NA	NA
QBJ44146.1\|4525226_4525355_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
QBJ44147.1\|4525451_4527806_+\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	2.8e-67	30.8
QBJ44148.1\|4527805_4528759_+	chemotaxis protein	A4JWL1	Burkholderia_virus	2.3e-36	50.8
QBJ44149.1\|4528758_4528968_+	hypothetical protein	A4JWL2	Burkholderia_virus	9.8e-17	60.3
QBJ44150.1\|4528955_4529999_+	phage protein D	Q6QIA2	Burkholderia_phage	3.2e-76	45.1
QBJ44151.1\|4530008_4530731_+\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	2.3e-12	42.0
QBJ44152.1\|4530739_4530979_+	hypothetical protein	NA	NA	NA	NA
QBJ44153.1\|4531054_4531417_+	GtrA family protein	U5P0S6	Shigella_phage	9.6e-44	70.8
QBJ44154.1\|4531413_4532343_+	glycosyltransferase	S5FKN0	Shigella_phage	6.7e-150	83.8
QBJ44155.1\|4532342_4533890_+	hypothetical protein	B9UDL6	Salmonella_phage	1.6e-50	30.4
QBJ44156.1\|4534053_4534413_+\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
QBJ44157.1\|4534403_4535519_+\|plate	baseplate protein	Q6QI99	Burkholderia_phage	5.3e-101	52.2
QBJ44158.1\|4535511_4536144_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	1.1e-23	56.4
QBJ44159.1\|4536146_4537628_+\|tail	phage tail protein	A0A0M3ULF6	Salmonella_phage	1.6e-52	52.7
QBJ44160.1\|4537637_4538153_+\|tail	tail fiber assembly protein	A0A0U2QV64	Escherichia_phage	1.3e-33	40.7

DBSCAN-SWA_12

4686985 : 4722703

Salmonella_phage(45.24%)

terminase,tail,capsid,holin,head,portal,plate,integrase

attL 4686778:4686824|attR 4717757:4717803

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4686778:4686824	attL	NA	NA	NA	NA
QBJ44279.1\|4686985_4687402_+	hypothetical protein	S4TTB4	Salmonella_phage	1.8e-33	52.3
QBJ44280.1\|4687436_4687655_-	transcriptional regulator	S4TNZ3	Salmonella_phage	4.7e-38	100.0
QBJ44281.1\|4687732_4688902_-	hypothetical protein	S4TRX8	Salmonella_phage	1.4e-205	95.6
QBJ44282.1\|4688898_4689384_-\|tail	phage tail protein	S4TUC3	Salmonella_phage	5.9e-81	94.4
QBJ44283.1\|4689395_4691837_-\|tail	phage tail tape measure protein	A0A0M3UL85	Salmonella_phage	0.0e+00	93.1
QBJ44284.1\|4691829_4691985_-\|tail	GpE family phage tail protein	Q6K1G8	Salmonella_virus	8.8e-23	98.0
QBJ44285.1\|4691981_4692317_-\|tail	phage tail assembly protein	A0A0M4S5P8	Salmonella_phage	1.8e-52	100.0
QBJ44286.1\|4692379_4692898_-\|tail	phage major tail tube protein	S4TNZ0	Salmonella_phage	1.4e-93	99.4
QBJ44287.1\|4692913_4694101_-\|tail	phage tail protein	Q6K1H0	Salmonella_virus	2.0e-223	100.0
QBJ44288.1\|4694235_4694805_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	3.0e-92	86.8
QBJ44289.1\|4694804_4696547_-	hypothetical protein	A0A0M3ULF6	Salmonella_phage	1.5e-267	97.1
QBJ44290.1\|4696557_4697088_-\|tail	phage tail protein I	A0A0M4R4W9	Salmonella_phage	1.9e-104	100.0
QBJ44291.1\|4697080_4697989_-\|plate	baseplate assembly protein	A0A1J0I2M3	Salmonella_phage	1.7e-158	98.7
QBJ44292.1\|4697995_4698343_-\|plate	baseplate assembly protein	A0A0M4RE59	Salmonella_phage	2.1e-56	98.3
QBJ44293.1\|4698339_4698981_-\|plate	phage baseplate assembly protein V	Q6K1H6	Salmonella_virus	2.4e-98	85.0
QBJ44294.1\|4699057_4700434_-	DUF4062 domain-containing protein	NA	NA	NA	NA
QBJ44295.1\|4700438_4700906_-	phage virion morphogenesis protein	O80313	Escherichia_phage	9.8e-49	67.8
QBJ44296.1\|4700898_4701366_-\|tail	phage tail protein	U5N0S7	Enterobacteria_phage	2.2e-56	69.0
QBJ44297.1\|4701328_4701574_-\|holin	holin	S4TNY4	Salmonella_phage	5.5e-27	73.1
QBJ44298.1\|4701473_4701887_-	protein lysB	O80310	Escherichia_phage	8.4e-36	59.9
QBJ44299.1\|4701883_4702393_-	lysozyme	A0A218M4K3	Erwinia_phage	4.6e-76	82.6
QBJ44300.1\|4702376_4702598_-	primosomal protein	A0A218M4L5	Erwinia_phage	8.7e-24	71.2
QBJ44301.1\|4702588_4702792_-\|tail	phage tail protein	U5N3E7	Enterobacteria_phage	8.9e-23	76.1
QBJ44302.1\|4702791_4703292_-\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	3.8e-59	68.5
QBJ44303.1\|4703389_4704148_-\|terminase	terminase	Q94MJ2	Enterobacteria_phage	2.7e-80	67.1
QBJ44304.1\|4704151_4705312_-\|capsid	phage major capsid protein, P2 family	A0A0M4R4W2	Salmonella_phage	2.8e-129	62.5
QBJ44305.1\|4705343_4706207_-\|capsid	capsid scaffolding protein	A0A218M4L9	Erwinia_phage	4.5e-100	64.8
QBJ44306.1\|4706371_4708141_+	oxidoreductase	Q9T0R3	Escherichia_phage	3.2e-286	81.0
QBJ44307.1\|4708140_4709178_+\|portal	phage portal protein	Q6K1J0	Salmonella_virus	7.7e-163	78.7
QBJ44308.1\|4709698_4709890_-	hypothetical protein	S4TRZ0	Salmonella_phage	1.1e-27	100.0
QBJ44309.1\|4709888_4710320_+	hypothetical protein	S4TUD6	Salmonella_phage	1.1e-75	100.0
QBJ44310.1\|4710453_4711494_+	cell filamentation protein Fic	S4TP71	Salmonella_phage	6.3e-197	100.0
QBJ44311.1\|4711490_4711688_-	hypothetical protein	NA	NA	NA	NA
QBJ44312.1\|4711866_4714143_-	replication endonuclease	S4TTC1	Salmonella_phage	0.0e+00	88.0
QBJ44313.1\|4714132_4714408_-	hypothetical protein	M1TAP2	Escherichia_phage	7.0e-31	72.5
QBJ44314.1\|4714404_4714629_-	hypothetical protein	A0A0F7LDG9	Escherichia_phage	2.0e-23	75.7
QBJ44315.1\|4714930_4715155_-	DUF2732 domain-containing protein	Q7Y4C2	Escherichia_virus	3.4e-23	78.4
QBJ44316.1\|4715218_4715719_-	replication protein B	M1SV55	Escherichia_phage	1.8e-85	91.0
QBJ44317.1\|4715888_4716161_-	hypothetical protein	Q1JS36	Enterobacteria_phage	1.0e-42	87.8
QBJ44318.1\|4716297_4716591_+	XRE family transcriptional regulator	Q1JS45	Enterobacteria_phage	1.6e-36	75.3
QBJ44319.1\|4716660_4717641_+\|integrase	integrase	S4TP66	Salmonella_phage	1.5e-179	96.0
QBJ44320.1\|4717825_4718326_-	stress adaptor protein CpxP	NA	NA	NA	NA
4717757:4717803	attR	NA	NA	NA	NA
QBJ44321.1\|4718476_4719175_+	DNA-binding response regulator	Q6XM27	Feldmannia_irregularis_virus	5.3e-06	30.3
QBJ44322.1\|4719171_4720545_+	two-component system sensor histidine kinase CpxA	W8CYF6	Bacillus_phage	7.2e-15	25.6
QBJ44323.1\|4720592_4720796_-	hypothetical protein	NA	NA	NA	NA
QBJ44324.1\|4720916_4721312_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
QBJ44325.1\|4721323_4722076_-	MOSC domain-containing protein	NA	NA	NA	NA
QBJ44326.1\|4722082_4722703_-	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	2.4e-63	58.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP025275

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

9880 : 63050

Escherichia_phage(23.08%)

tail,head,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBJ44696.1\|9880_11143_+\|transposase	IS1380 family transposase ISEc9	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
QBJ44697.1\|11466_12612_+	class C beta-lactamase CMY-2	NA	NA	NA	NA
QBJ44698.1\|12705_13239_+	hypothetical protein	A0A1W6JNX6	Morganella_phage	6.1e-47	54.1
QBJ44699.1\|13235_13553_-	quaternary ammonium compound-resistance protein SugE	NA	NA	NA	NA
QBJ44700.1\|13809_14235_+	LuxR family transcriptional regulator	NA	NA	NA	NA
QBJ44701.1\|19914_20622_+	disulfide isomerase	NA	NA	NA	NA
QBJ44702.1\|22563_22956_-	conjugal transfer protein TraA	NA	NA	NA	NA
QBJ44703.1\|22959_23538_-	type IV conjugative transfer system protein TraV	NA	NA	NA	NA
QBJ44704.1\|23534_24851_-	conjugal transfer protein TraB	NA	NA	NA	NA
QBJ44705.1\|24847_25765_-	conjugal transfer protein TraK	NA	NA	NA	NA
QBJ44706.1\|25748_26375_-	pilus assembly protein	NA	NA	NA	NA
QBJ44707.1\|26371_26653_-	type IV conjugative transfer system protein TraL	NA	NA	NA	NA
QBJ44708.1\|26797_27175_-	hypothetical protein	NA	NA	NA	NA
QBJ44709.1\|27498_28161_-	hypothetical protein	NA	NA	NA	NA
QBJ44710.1\|28160_28538_-	hypothetical protein	NA	NA	NA	NA
QBJ44711.1\|28547_28994_-	hypothetical protein	NA	NA	NA	NA
QBJ44712.1\|29003_29633_-	DUF4400 domain-containing protein	NA	NA	NA	NA
QBJ44713.1\|29589_30174_-	hypothetical protein	NA	NA	NA	NA
QBJ44714.1\|30184_32050_-	conjugal transfer protein	NA	NA	NA	NA
QBJ44715.1\|32046_35019_-	conjugal transfer protein TraI	NA	NA	NA	NA
QBJ44716.1\|35186_35804_+	hypothetical protein	NA	NA	NA	NA
QBJ44717.1\|35785_36019_+	hypothetical protein	NA	NA	NA	NA
QBJ44718.1\|36018_38211_+	DNA topoisomerase III	A0A1X9I6W8	Streptococcus_phage	9.9e-43	29.4
QBJ44719.1\|38225_38714_+	hypothetical protein	NA	NA	NA	NA
QBJ44720.1\|38804_39104_-	RNA-binding protein	A0A0K1LLW2	Caulobacter_phage	3.6e-20	55.4
QBJ44721.1\|39108_39315_-	hypothetical protein	NA	NA	NA	NA
QBJ44722.1\|39315_39933_-\|head,tail	phage head-tail adapter protein	NA	NA	NA	NA
QBJ44723.1\|39988_40645_-	hypothetical protein	NA	NA	NA	NA
QBJ44724.1\|40644_42072_-	DNA cytosine methyltransferase	NA	NA	NA	NA
QBJ44725.1\|42075_42576_-	hypothetical protein	I3UMJ0	Colwellia_phage	9.5e-18	38.4
QBJ44726.1\|42584_42917_-	hypothetical protein	NA	NA	NA	NA
QBJ44824.1\|42901_43333_-	hypothetical protein	NA	NA	NA	NA
QBJ44727.1\|43400_44075_-	thymidylate kinase	NA	NA	NA	NA
QBJ44728.1\|44049_44331_-	hypothetical protein	NA	NA	NA	NA
QBJ44729.1\|44323_44701_-	hypothetical protein	A0A2H4P7P5	Pseudomonas_phage	1.7e-22	49.6
QBJ44730.1\|45262_45898_+	restriction endonuclease subunit M	NA	NA	NA	NA
QBJ44731.1\|45950_46223_-	hypothetical protein	NA	NA	NA	NA
QBJ44732.1\|46271_47453_-	chromosome partitioning protein ParB	I3NLC2	Bifidobacterium_phage	2.4e-11	28.7
QBJ44733.1\|47456_48242_-	ParA family protein	A0A1X9IGI7	Lactococcus_phage	6.1e-11	26.4
QBJ44734.1\|48415_48727_-	hypothetical protein	NA	NA	NA	NA
QBJ44735.1\|49033_49849_+	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	5.9e-09	27.6
QBJ44736.1\|49909_50713_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
QBJ44737.1\|50712_51549_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
QBJ44738.1\|51854_52097_+	relaxase	NA	NA	NA	NA
QBJ44739.1\|52128_52806_-	TetR family transcriptional regulator	NA	NA	NA	NA
QBJ44740.1\|52884_54084_+	tetracycline efflux MFS transporter Tet(A)	NA	NA	NA	NA
QBJ44741.1\|54350_54656_-	LysR family transcriptional regulator	NA	NA	NA	NA
QBJ44742.1\|54683_55898_-	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	3.2e-19	28.7
QBJ44743.1\|56114_56999_-	DUF3363 domain-containing protein	NA	NA	NA	NA
QBJ44744.1\|57029_58523_-\|transposase	IS91 family transposase	NA	NA	NA	NA
QBJ44745.1\|58733_58958_-	hypothetical protein	NA	NA	NA	NA
QBJ44746.1\|58954_59692_-	resolvase	NA	NA	NA	NA
QBJ44747.1\|59798_60290_+	hypothetical protein	NA	NA	NA	NA
QBJ44748.1\|60323_61028_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QBJ44749.1\|61090_61795_-\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
QBJ44750.1\|62345_63050_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP025273

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP025275

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection