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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP036529 Streptococcus pneumoniae strain 521 chromosome, complete genome 2 crisprs DinG,cas3,PrimPol,RT 1 1 9 0

Results visualization

1. CP036529
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP036529_1 917406-917501 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP036529_2 1363064-1363181 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 CP036529.1 22798-22825 0 1.0
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 CP036529.1 975328-975355 0 1.0
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 CP036529.1 1404813-1404840 0 1.0

1. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to position: 22798-22825, mismatch: 0, identity: 1.0

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
gctctttgtcaactgtagtgggttgaaa	Protospacer
****************************

2. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to position: 975328-975355, mismatch: 0, identity: 1.0

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
gctctttgtcaactgtagtgggttgaaa	Protospacer
****************************

3. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to position: 1404813-1404840, mismatch: 0, identity: 1.0

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
gctctttgtcaactgtagtgggttgaaa	Protospacer
****************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 KY065475 Streptococcus phage IPP35, complete genome 21704-21731 0 1.0
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 MK448817 Streptococcus phage Javan59, complete genome 41452-41479 2 0.929
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 MK448405 Streptococcus satellite phage Javan293, complete genome 10770-10797 3 0.893
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 MH937476 Streptococcus phage CHPC933, partial genome 26091-26118 3 0.893
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NC_012642 Streptococcus parasanguinis plasmid pFW213, complete sequence 1560-1587 3 0.893
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP015284 Streptococcus salivarius strain ATCC 25975 plasmid, complete sequence 83115-83142 4 0.857
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP016699 Lactococcus lactis subsp. lactis strain 275 plasmid p275A, complete sequence 36883-36910 4 0.857
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP015284 Streptococcus salivarius strain ATCC 25975 plasmid, complete sequence 55243-55270 5 0.821
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 MN480762 Streptococcus salivarius strain NU10 plasmid pSsal-NU10, complete sequence 10598-10625 5 0.821
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 MN480762 Streptococcus salivarius strain NU10 plasmid pSsal-NU10, complete sequence 168253-168280 5 0.821
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP020429 Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence 118713-118740 5 0.821
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP020429 Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence 98135-98162 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NC_019430 Lactococcus lactis subsp. cremoris UC509.9 plasmid pCIS8, complete sequence 14620-14647 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP018832 Enterococcus faecium strain ISMMS_VRE_9 plasmid p1_ISMMS_VRE9, complete sequence 180660-180687 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP040906 Enterococcus faecium strain FB-1 plasmid punnamed, complete sequence 113824-113851 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP027518 Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence 150478-150505 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP027498 Enterococcus faecium strain AUSMDU00004167 plasmid unnamed1, complete sequence 174624-174651 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP016744 Lactococcus lactis subsp. cremoris strain JM2 plasmid pJM2C, complete sequence 19046-19073 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 MT074686 Enterococcus faecium strain E1077 plasmid pE1077-217, complete sequence 73336-73363 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP025756 Enterococcus faecium strain AALTL plasmid pEFA-99d7, complete sequence 63468-63495 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP031539 Lactococcus lactis subsp. cremoris strain 3107 plasmid p3107A, complete sequence 22007-22034 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_LR135476 Enterococcus faecium isolate E8423 plasmid 2 151354-151381 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP016738 Lactococcus lactis subsp. cremoris strain JM3 plasmid pJM3B, complete sequence 19022-19049 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NC_017493 Lactococcus lactis subsp. cremoris A76 plasmid pQA549, complete sequence 16777-16804 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NC_021987 Enterococcus faecium Aus0085 plasmid p1, complete sequence 76654-76681 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_LR135358 Enterococcus faecium isolate E7948 plasmid 2 169632-169659 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP044265 Enterococcus faecium strain V1836 plasmid pHVH-V1836-1, complete sequence 110148-110175 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP016708 Lactococcus lactis subsp. cremoris strain UC109 plasmid pUC109B, complete sequence 14623-14650 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NC_017478 Lactococcus lactis plasmid pSK11L, complete sequence 19224-19251 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP020439 Streptococcus equinus strain FDAARGOS_251 plasmid unamed1 sequence 76001-76028 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP018188 Streptococcus salivarius strain ICDC2 plasmid, complete sequence 47121-47148 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_AP022342 Enterococcus faecium strain KUHS13 plasmid pKO1, complete sequence 223062-223089 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NC_008506 Lactococcus lactis subsp. cremoris SK11 plasmid 4, complete sequence 44473-44500 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP016733 Lactococcus lactis subsp. cremoris strain JM4 plasmid pJM4E, complete sequence 19069-19096 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_LR135308 Enterococcus faecium isolate E7240 plasmid 2 140234-140261 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP018827 Enterococcus faecium strain ISMMS_VRE_12 plasmid p1_ISMMS_VRE12, complete sequence 180660-180687 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_MF150536 Lactococcus lactis subsp. lactis bv. diacetylactis strain FM03P plasmid pLd8, complete sequence 19158-19185 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP041262 Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R1, complete sequence 55029-55056 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP043524 Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 plasmid pSD96_05, complete sequence 28578-28605 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP013995 Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence 80441-80468 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP014450 Enterococcus faecium strain ATCC 700221 plasmid unnamed1, complete sequence 29008-29035 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP027502 Enterococcus faecium strain AUSMDU00004142 plasmid unnamed1, complete sequence 55406-55433 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP016715 Lactococcus lactis subsp. lactis strain UC063 plasmid pUC063A, complete sequence 20508-20535 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP040803 Streptococcus salivarius strain LAB813 plasmid pSAL813, complete sequence 65781-65808 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_LR135279 Enterococcus faecium isolate E6975 plasmid 2 44791-44818 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_LR135236 Enterococcus faecium isolate E7067 plasmid 2 36603-36630 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_AP018502 Lactococcus lactis subsp. cremoris strain C4 plasmid pC43, complete sequence 13248-13275 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP041256 Enterococcus faecium strain 515 plasmid p26, complete sequence 10619-10646 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_LR135220 Enterococcus faecium isolate E7040 plasmid 2 36627-36654 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_LR134106 Enterococcus faecium isolate E6043 plasmid 2 36627-36654 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP023514 Enterococcus sp. FDAARGOS_375 plasmid unnamed1, complete sequence 139819-139846 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP040876 Enterococcus faecium strain DB-1 plasmid punnamed2 74007-74034 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP019993 Enterococcus faecium isolate 2014-VREF-268 plasmid p268-1, complete sequence 46625-46652 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP035655 Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence 78878-78905 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP035661 Enterococcus faecium strain UAMSEF_09 plasmid unnamed1, complete sequence 72511-72538 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP035667 Enterococcus faecium strain UAMSEF_20 plasmid unnamed1, complete sequence 72513-72540 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP035649 Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence 78881-78908 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP051519 Lactococcus lactis subsp. cremoris strain F plasmid pScrF52, complete sequence 39090-39117 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP041271 Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S1, complete sequence 55028-55055 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP040237 Enterococcus faecium strain VB3025 plasmid unnamed1, complete sequence 55030-55057 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NC_020208 Enterococcus faecium ATCC 8459 = NRRL B-2354 plasmid pNB2354_1, complete sequence 121228-121255 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP034948 Enterococcus faecium strain NM213 plasmid unnamed5, complete sequence 64834-64861 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP012461 Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p1, complete sequence 55439-55466 6 0.786
CP036529_2 2.1|1363109|28|CP036529|CRISPRCasFinder 1363109-1363136 28 NZ_CP016687 Lactococcus lactis subsp. cremoris strain 158 plasmid p158C, complete sequence 17331-17358 6 0.786

1. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to KY065475 (Streptococcus phage IPP35, complete genome) position: , mismatch: 0, identity: 1.0

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
gctctttgtcaactgtagtgggttgaaa	Protospacer
****************************

2. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to MK448817 (Streptococcus phage Javan59, complete genome) position: , mismatch: 2, identity: 0.929

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
gctctttgtcaactgtagtgggttgatg	Protospacer
************************** .

3. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to MK448405 (Streptococcus satellite phage Javan293, complete genome) position: , mismatch: 3, identity: 0.893

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
gctctttgtcaactgtagtgggtagatg	Protospacer
*********************** ** .

4. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to MH937476 (Streptococcus phage CHPC933, partial genome) position: , mismatch: 3, identity: 0.893

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
gctctttgtcaactgtagtgggtagatg	Protospacer
*********************** ** .

5. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NC_012642 (Streptococcus parasanguinis plasmid pFW213, complete sequence) position: , mismatch: 3, identity: 0.893

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
gctcattgtcaactgtagtgggtggaca	Protospacer
**** ****************** ** *

6. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP015284 (Streptococcus salivarius strain ATCC 25975 plasmid, complete sequence) position: , mismatch: 4, identity: 0.857

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
gctctttgtcaactgtagtgggtgacga	Protospacer
*********************** . .*

7. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP016699 (Lactococcus lactis subsp. lactis strain 275 plasmid p275A, complete sequence) position: , mismatch: 4, identity: 0.857

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
gctctttgtcaaccgtagtgggtagatg	Protospacer
*************.********* ** .

8. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP015284 (Streptococcus salivarius strain ATCC 25975 plasmid, complete sequence) position: , mismatch: 5, identity: 0.821

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
gttctttgtcaactgtagtgggtgacga	Protospacer
*.********************* . .*

9. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to MN480762 (Streptococcus salivarius strain NU10 plasmid pSsal-NU10, complete sequence) position: , mismatch: 5, identity: 0.821

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
gctctctgtcaactgtagtgggtgacga	Protospacer
*****.***************** . .*

10. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to MN480762 (Streptococcus salivarius strain NU10 plasmid pSsal-NU10, complete sequence) position: , mismatch: 5, identity: 0.821

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
gctctctgtcaactgtagtgggtgacga	Protospacer
*****.***************** . .*

11. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP020429 (Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.821

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
gctccttgtcaactgtagtgggtgatga	Protospacer
****.****************** . .*

12. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP020429 (Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
gatccttgtcaactgtagtgggtgacga	Protospacer
* **.****************** . .*

13. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NC_019430 (Lactococcus lactis subsp. cremoris UC509.9 plasmid pCIS8, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

14. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP018832 (Enterococcus faecium strain ISMMS_VRE_9 plasmid p1_ISMMS_VRE9, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

15. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP040906 (Enterococcus faecium strain FB-1 plasmid punnamed, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

16. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP027518 (Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

17. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP027498 (Enterococcus faecium strain AUSMDU00004167 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

18. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP016744 (Lactococcus lactis subsp. cremoris strain JM2 plasmid pJM2C, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

19. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to MT074686 (Enterococcus faecium strain E1077 plasmid pE1077-217, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

20. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP025756 (Enterococcus faecium strain AALTL plasmid pEFA-99d7, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

21. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP031539 (Lactococcus lactis subsp. cremoris strain 3107 plasmid p3107A, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

22. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_LR135476 (Enterococcus faecium isolate E8423 plasmid 2) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

23. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP016738 (Lactococcus lactis subsp. cremoris strain JM3 plasmid pJM3B, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

24. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NC_017493 (Lactococcus lactis subsp. cremoris A76 plasmid pQA549, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

25. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NC_021987 (Enterococcus faecium Aus0085 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

26. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_LR135358 (Enterococcus faecium isolate E7948 plasmid 2) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

27. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP044265 (Enterococcus faecium strain V1836 plasmid pHVH-V1836-1, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

28. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP016708 (Lactococcus lactis subsp. cremoris strain UC109 plasmid pUC109B, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

29. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NC_017478 (Lactococcus lactis plasmid pSK11L, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

30. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP020439 (Streptococcus equinus strain FDAARGOS_251 plasmid unamed1 sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
gctctatgtcaattgtagtgggtgacga	Protospacer
***** ******.********** . .*

31. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP018188 (Streptococcus salivarius strain ICDC2 plasmid, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
gctcgatgtcaactgtagtgggtgacga	Protospacer
****  ***************** . .*

32. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_AP022342 (Enterococcus faecium strain KUHS13 plasmid pKO1, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

33. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NC_008506 (Lactococcus lactis subsp. cremoris SK11 plasmid 4, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

34. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP016733 (Lactococcus lactis subsp. cremoris strain JM4 plasmid pJM4E, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgatga	Protospacer
* *** ***************** . .*

35. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_LR135308 (Enterococcus faecium isolate E7240 plasmid 2) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

36. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP018827 (Enterococcus faecium strain ISMMS_VRE_12 plasmid p1_ISMMS_VRE12, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

37. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_MF150536 (Lactococcus lactis subsp. lactis bv. diacetylactis strain FM03P plasmid pLd8, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

38. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP041262 (Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R1, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

39. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP043524 (Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 plasmid pSD96_05, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

40. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP013995 (Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

41. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP014450 (Enterococcus faecium strain ATCC 700221 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

42. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP027502 (Enterococcus faecium strain AUSMDU00004142 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

43. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP016715 (Lactococcus lactis subsp. lactis strain UC063 plasmid pUC063A, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

44. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP040803 (Streptococcus salivarius strain LAB813 plasmid pSAL813, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
gctcttagtcaactgtagtgagtgacga	Protospacer
****** *************.** . .*

45. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_LR135279 (Enterococcus faecium isolate E6975 plasmid 2) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

46. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_LR135236 (Enterococcus faecium isolate E7067 plasmid 2) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

47. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_AP018502 (Lactococcus lactis subsp. cremoris strain C4 plasmid pC43, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

48. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP041256 (Enterococcus faecium strain 515 plasmid p26, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

49. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_LR135220 (Enterococcus faecium isolate E7040 plasmid 2) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

50. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_LR134106 (Enterococcus faecium isolate E6043 plasmid 2) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

51. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP023514 (Enterococcus sp. FDAARGOS_375 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

52. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP040876 (Enterococcus faecium strain DB-1 plasmid punnamed2) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

53. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP019993 (Enterococcus faecium isolate 2014-VREF-268 plasmid p268-1, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

54. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP035655 (Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

55. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP035661 (Enterococcus faecium strain UAMSEF_09 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

56. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP035667 (Enterococcus faecium strain UAMSEF_20 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

57. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP035649 (Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

58. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP051519 (Lactococcus lactis subsp. cremoris strain F plasmid pScrF52, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

59. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP041271 (Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S1, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

60. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP040237 (Enterococcus faecium strain VB3025 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

61. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NC_020208 (Enterococcus faecium ATCC 8459 = NRRL B-2354 plasmid pNB2354_1, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

62. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP034948 (Enterococcus faecium strain NM213 plasmid unnamed5, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

63. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP012461 (Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p1, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

64. spacer 2.1|1363109|28|CP036529|CRISPRCasFinder matches to NZ_CP016687 (Lactococcus lactis subsp. cremoris strain 158 plasmid p158C, complete sequence) position: , mismatch: 6, identity: 0.786

gctctttgtcaactgtagtgggttgaaa	CRISPR spacer
ggtctatgtcaactgtagtgggtgacga	Protospacer
* *** ***************** . .*

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 173008 : 184792 13 Streptococcus_phage(72.73%) NA NA
DBSCAN-SWA_2 689282 : 695649 8 Escherichia_phage(42.86%) transposase NA
DBSCAN-SWA_3 838172 : 890364 54 Staphylococcus_phage(25.0%) tRNA,bacteriocin,protease NA
DBSCAN-SWA_4 962190 : 973646 8 Cyanophage(33.33%) NA NA
DBSCAN-SWA_5 1001422 : 1061221 54 Streptococcus_phage(38.89%) tRNA,transposase,holin,protease NA
DBSCAN-SWA_6 1311507 : 1363579 51 Streptococcus_phage(45.45%) tRNA,transposase,bacteriocin,protease NA
DBSCAN-SWA_7 1747278 : 1753056 9 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_8 1848083 : 1906986 53 Bacillus_phage(17.65%) holin,protease NA
DBSCAN-SWA_9 1940802 : 1950906 11 Bacillus_phage(25.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage