CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LT717094	Escherichia coli strain LF82_P10 genome assembly, chromosome: I	0 crisprs	NA	0	0	1	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

134 : 87227

131

Salmonella_phage(39.23%)

plate,capsid,terminase,tail,lysis

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SIW61226.1\|134_479_+	Phage protein	M1FGL4	Enterobacteriaphage	2.6e-59	100.0
SIW61227.1\|478_1060_+	Phage protein	A0A2I6PH01	Salmonella_phage	1.3e-106	97.9
SIW61228.1\|1143_1362_+	Phage protein	A0A0E3T8W3	Escherichia_phage	5.7e-36	100.0
SIW61229.1\|1358_1862_+	Phage protein	S4TPM4	Salmonella_phage	9.4e-90	97.6
SIW61230.1\|1937_2162_+	Phage protein	M1FN51	Enterobacteriaphage	1.1e-21	100.0
SIW61231.1\|2215_2671_+	Phage protein	A0A0A0RKD9	Escherichia_phage	1.6e-80	98.7
SIW61232.1\|2633_3098_+	Phage protein	A0A1B1PD48	Escherichia_phage	6.4e-85	99.4
SIW61233.1\|3111_3660_+	Phage protein	A0A0F6TIW2	Escherichia_coli_O157_typing_phage	3.8e-100	97.3
SIW61234.1\|5328_5577_-	Phage protein	S4TWK2	Salmonella_phage	3.8e-44	100.0
SIW61235.1\|5643_5907_-	Phage protein	S4TSV8	Salmonella_phage	3.8e-42	98.9
SIW61236.1\|5973_6504_-	Phage protein	M1FLK0	Enterobacteriaphage	8.4e-89	93.8
SIW61237.1\|6724_7066_-	Phage protein	A0A0E3XBQ8	Escherichia_phage	8.4e-58	97.3
SIW61238.1\|7157_7391_-	Phage protein	A0A0B5H8F8	Salmonella_phage	1.7e-38	98.7
SIW61239.1\|7457_8000_-	Phage protein	A0A0H3UDU2	Escherichia_phage	2.2e-100	98.3
SIW61240.1\|8087_8291_-	Phage protein	A0A0E3T9V4	Escherichia_phage	1.2e-30	100.0
SIW61241.1\|8394_8799_-	Phage protein	S4TU39	Salmonella_phage	1.1e-67	100.0
SIW61242.1\|8885_9158_-	Phage protein	A0A0E3XDD1	Escherichia_phage	4.6e-43	93.3
SIW61243.1\|9183_9342_-	hypothetical protein	NA	NA	NA	NA
SIW61244.1\|9431_9764_-	Phage protein	S4TR26	Salmonella_phage	9.4e-38	100.0
SIW61245.1\|9757_10054_-	Phage protein	S4TU44	Salmonella_phage	7.3e-50	100.0
SIW61246.1\|10146_10659_-	Phage protein	S4TQX7	Salmonella_phage	1.2e-89	97.6
SIW61247.1\|10744_11038_-	Phage protein	S4TUI9	Salmonella_phage	2.2e-46	100.0
SIW61248.1\|11124_11508_-	Phage protein	M1FGN5	Enterobacteriaphage	5.9e-68	100.0
SIW61249.1\|11597_11804_-	Phage protein	K9K907	Salmonella_phage	6.2e-32	95.6
SIW61250.1\|11803_11992_-	hypothetical protein	S4TVW0	Salmonella_phage	1.7e-28	100.0
SIW61251.1\|12512_13298_-	Phage protein	A0A0H3UCL8	Escherichia_phage	1.4e-148	98.9
SIW61252.1\|13298_13499_-	Phage protein	A0A0F6TIV2	Escherichia_coli_O157_typing_phage	5.3e-36	100.0
SIW61253.1\|13491_13719_-	Phage protein	A0A0E3T9U8	Escherichia_phage	4.6e-36	100.0
SIW61254.1\|13693_14020_-	Phage protein	S4TUG9	Salmonella_phage	1.2e-56	98.1
SIW61255.1\|14022_14292_-	Phage protein	M1FLL0	Enterobacteriaphage	1.8e-47	100.0
SIW61256.1\|14288_14486_-	Phage protein	A0A222YYC4	Salmonella_phage	6.1e-29	98.5
SIW61257.1\|14451_14799_-	Phage protein	M1FN59	Enterobacteriaphage	3.1e-60	100.0
SIW61258.1\|14851_15316_-	Phage protein	A0A222YX99	Salmonella_phage	1.5e-73	99.4
SIW61259.1\|15326_16022_-	Phage protein	M1FNE1	Enterobacteriaphage	1.7e-129	98.7
SIW61260.1\|15999_16548_-	Phage protein	S4TPC9	Salmonella_phage	3.2e-99	100.0
SIW61261.1\|16648_17758_-\|lysis	Phage rIIB lysis inhibitor	M1FGP6	Enterobacteriaphage	3.2e-199	95.9
SIW61262.1\|17837_20204_-\|lysis	Phage rIIA lysis inhibitor	S4TVQ8	Salmonella_phage	0.0e+00	98.7
SIW61263.1\|20232_20409_-	Phage protein	S4TQW4	Salmonella_phage	3.2e-29	100.0
SIW61264.1\|20390_20726_-	Phage protein	S4TTW9	Salmonella_phage	5.3e-57	98.2
SIW61265.1\|20779_22561_-	Nicotinamide phosphoribosyltransferase	A0A0E3T907	Escherichia_phage	0.0e+00	98.8
SIW61266.1\|22606_23488_-	Ribose-phosphate pyrophosphokinase	S4TVQ4	Salmonella_phage	4.5e-164	99.3
SIW61267.1\|23503_23782_-	Phage protein	A0A0A0RQ15	Escherichia_phage	8.1e-51	100.0
SIW61268.1\|23774_24290_-	Phage protein	A0A0E3XCE8	Escherichia_phage	5.8e-95	98.2
SIW61269.1\|24341_24662_-	Phage protein	A0A0B5HA30	Salmonella_phage	5.8e-53	100.0
SIW61270.1\|24664_24931_-	Phage protein	S4TPR2	Salmonella_phage	1.2e-35	95.5
SIW61271.1\|24945_25266_-	Phage protein	A0A0A0RQ28	Citrobacter_phage	5.3e-46	85.8
SIW61272.1\|25228_25714_-	Ribonucleotide reductase of class III (anaerobic), activating protein	K9K8K5	Salmonella_phage	3.2e-95	100.0
SIW61273.1\|25723_26023_-	Phage protein	S4TTV9	Salmonella_phage	2.3e-51	100.0
SIW61274.1\|26019_26415_-	Phage protein	S4TWF8	Salmonella_phage	5.3e-72	98.5
SIW61275.1\|26411_26543_-	Phage protein	S4TR80	Salmonella_phage	2.9e-19	100.0
SIW61276.1\|26587_26704_-	Phage protein	M1FNE7	Enterobacteriaphage	6.8e-12	92.1
SIW61277.1\|26769_28914_-	Ribonucleotide reductase of class III (anaerobic), large subunit	S4TVP8	Salmonella_phage	0.0e+00	99.4
SIW61278.1\|28962_29169_-	Phage protein	A0A2I6PH13	Salmonella_phage	2.2e-29	100.0
SIW61279.1\|29161_29404_-	Phage protein	A0A222YXK2	Salmonella_phage	2.5e-40	100.0
SIW61280.1\|29403_30477_-	Ribonucleotide reductase of class Ia (aerobic), beta subunit	D2K069	Staphylococcus_phage	3.5e-203	100.0
SIW61281.1\|30473_30731_-	Phage protein	A0A0H3UE47	Escherichia_phage	7.5e-43	100.0
SIW61282.1\|30786_33021_-	Ribonucleotide reductase of class Ia (aerobic), alpha subunit	A0A0A0RKA8	Escherichia_phage	0.0e+00	100.0
SIW61283.1\|33067_33406_-	Phage protein	A0A0D4DAP8	Salmonella_phage	1.7e-58	97.3
SIW61284.1\|33398_33722_-	Phage protein	A0A0F6TJC5	Escherichia_coli_O157_typing_phage	3.0e-57	100.0
SIW61285.1\|33702_34458_-	Phage protein	A0A0E3XD51	Escherichia_phage	1.5e-144	98.8
SIW61286.1\|34450_34681_-	Phage protein	M1FGR4	Enterobacteriaphage	5.3e-32	100.0
SIW61287.1\|34702_35200_-	Phage protein	M1FN68	Enterobacteriaphage	1.8e-93	100.0
SIW61288.1\|35189_36230_-	Phage exonuclease	A0A0F6THC7	Escherichia_coli_O157_typing_phage	5.3e-204	99.4
SIW61289.1\|36291_37149_-	Phage protein	A0A0F6TJS0	Escherichia_coli_O157_typing_phage	9.3e-146	100.0
SIW61290.1\|37221_37371_-	Phage protein	M1FLN3	Enterobacteriaphage	2.5e-19	100.0
SIW61291.1\|37367_37649_-	Phage protein	S4TR65	Salmonella_phage	6.5e-48	100.0
SIW61292.1\|37623_39609_-	DNA primase/helicase, phage-associated	A0A1B1PE47	Salmonella_phage	0.0e+00	99.7
SIW61293.1\|39601_39796_-	Phage protein	M1FQ36	Enterobacteriaphage	1.6e-26	100.0
SIW61294.1\|39810_40554_-	Deoxynucleotide monophosphate kinase	A0A0F6R8J6	Escherichia_coli_O157_typing_phage	1.8e-137	99.6
SIW61295.1\|40615_41428_-\|tail	Phage minor tail protein	A0A2I6PHL6	Salmonella_phage	4.1e-127	90.4
SIW61296.1\|41429_41852_-	Phage protein	A0A222YYU0	Salmonella_phage	8.8e-73	100.0
SIW61297.1\|42109_44809_+	DNA polymerase, phage-associated	A0A1B1PDC5	Escherichia_phage	0.0e+00	99.6
SIW61298.1\|44780_45344_+	Phage-associated homing endonuclease	A0A1B1PDC2	Escherichia_phage	1.3e-95	90.4
SIW61299.1\|45395_45608_+	Phage protein	A0A0D4DAN2	Salmonella_phage	1.6e-30	97.1
SIW61300.1\|45625_45781_+	hypothetical protein	S5MDW5	Escherichia_phage	3.7e-21	98.0
SIW61301.1\|45770_46025_+	hypothetical protein	K4IC51	Escherichia_phage	1.0e-39	94.0
SIW61302.1\|46034_46241_+	Phage protein	A0A0F6TJ05	Escherichia_coli_O157_typing_phage	6.2e-32	97.1
SIW61303.1\|46237_46429_+	Phage protein	A0A0F6TJJ6	Escherichia_coli_O157_typing_phage	1.0e-33	98.4
SIW61304.1\|46430_47534_+	DNA ligase, phage-associated	A0A1W6DWB0	Salmonella_phage	6.4e-216	98.9
SIW61305.1\|48146_48530_+	Phage protein	A0A0E3TAY7	Escherichia_phage	4.4e-63	96.9
SIW61306.1\|48531_48744_+	Phage protein	A0A0F6TJ78	Escherichia_coli_O157_typing_phage	3.7e-32	100.0
SIW61307.1\|48736_49036_+	Phage protein	A0A0A0RKL3	Escherichia_phage	1.8e-51	100.0
SIW61308.1\|49037_49397_+	Phage protein	M1FGT9	Enterobacteriaphage	3.7e-64	99.2
SIW61309.1\|49410_49926_+	Phage protein	D2K049	Staphylococcus_phage	1.1e-88	96.5
SIW61310.1\|49926_50187_+	Phage protein	A0A0E3TAY4	Escherichia_phage	9.2e-49	100.0
SIW61311.1\|50183_50729_+	Dihydrofolate reductase	M1FNG3	Enterobacteriaphage	3.7e-100	97.8
SIW61312.1\|50730_51630_+	Thymidylate synthase	K4I1B4	Salmonella_phage	1.8e-176	98.3
SIW61313.1\|51666_52038_-	Phage protein	A0A0F6TJH9	Escherichia_coli_O157_typing_phage	6.3e-59	99.2
SIW61314.1\|52038_52233_-	Phage protein	A0A0F6TJ72	Escherichia_coli_O157_typing_phage	3.3e-27	100.0
SIW61315.1\|52312_54694_-\|tail	Phage tail fibers	A0A0A0RLH0	Escherichia_phage	1.8e-271	72.5
SIW61316.1\|54740_55928_-\|tail	Phage tail fiber protein	A0A0E3T9Y3	Escherichia_phage	1.6e-143	84.6
SIW61317.1\|55930_56233_-	Phage protein	S4TRA3	Salmonella_phage	1.2e-52	98.0
SIW61318.1\|56232_57090_-	Phage protein	A0A0A0RPT9	Escherichia_phage	1.7e-136	98.2
SIW61319.1\|57092_58562_-	putative bacteriophage protein	A0A1B1PD94	Escherichia_phage	1.3e-272	99.8
SIW61320.1\|58561_58981_-	Phage protein	M1FQ46	Enterobacteriaphage	2.5e-72	100.0
SIW61321.1\|58980_59604_-\|plate	Phage baseplate	M1FNG8	Enterobacteriaphage	2.2e-120	100.0
SIW61322.1\|59603_60581_-	Phage protein	A0A0E3XD38	Escherichia_phage	5.5e-187	100.0
SIW61323.1\|60580_60922_-	Phage protein	M1FGV4	Enterobacteriaphage	4.0e-60	100.0
SIW61324.1\|60921_61722_-	IS, phage, Tn; Transposon-related functions	M1FN84	Enterobacteriaphage	1.0e-122	100.0
SIW61325.1\|61721_63950_-\|tail	Phage tail length tape-measure protein	A0A0A0RLG1	Escherichia_phage	0.0e+00	99.1
SIW61326.1\|63949_64189_-	Phage protein	M1FNH1	Enterobacteriaphage	9.7e-37	100.0
SIW61327.1\|64191_64590_-	Phage protein	S4TPV0	Salmonella_phage	1.5e-66	100.0
SIW61328.1\|64663_65110_-	Phage protein	M1FGV8	Enterobacteriaphage	1.7e-79	100.0
SIW61329.1\|65125_66478_-	Phage protein	K4I520	Salmonella_phage	1.1e-246	98.4
SIW61330.1\|66478_67078_-	Phage protein	M1FQ49	Enterobacteriaphage	2.2e-109	100.0
SIW61331.1\|67052_67454_-	Phage protein	A0A0F6TJ62	Escherichia_coli_O157_typing_phage	8.3e-73	100.0
SIW61332.1\|67450_67933_-	Phage protein	K4IC26	Escherichia_phage	6.3e-83	100.0
SIW61333.1\|67932_68382_-	Phage protein	M1FGW1	Enterobacteriaphage	5.8e-83	100.0
SIW61334.1\|68403_69516_-\|capsid	major capsid protein	K4I0P2	Escherichia_phage	6.5e-208	97.8
SIW61335.1\|69549_69927_-	Phage protein	A0A2I6PHQ4	Salmonella_phage	3.9e-64	98.4
SIW61336.1\|69938_71285_-\|tail	Head-tail preconnector protein GP5	D2K026	Staphylococcus_phage	1.3e-239	100.0
SIW61337.1\|71296_71629_-	Phage protein	A0A0F6R8H5	Escherichia_coli_O157_typing_phage	1.7e-55	100.0
SIW61338.1\|71628_72129_-	Phage protein	A0A2I6PGN0	Salmonella_phage	1.8e-88	100.0
SIW61339.1\|72128_73595_-	Phage protein	A0A0F6TJ57	Escherichia_coli_O157_typing_phage	6.0e-286	100.0
SIW61340.1\|73612_75214_-\|terminase	Phage terminase, large subunit	M1FQ52	Enterobacteriaphage	0.0e+00	100.0
SIW61341.1\|75235_75436_-	Phage protein	S4TU96	Salmonella_phage	1.3e-26	100.0
SIW61342.1\|75832_76567_-	Phage protein	D2K0D0	Staphylococcus_phage	4.6e-77	91.4
SIW61343.1\|77018_77576_-	Phage protein	A0A1B1PDY2	Salmonella_phage	7.2e-107	97.3
SIW61344.1\|77572_77815_-	hypothetical protein	A0A0F6TJV7	Escherichia_coli_O157_typing_phage	4.3e-40	98.8
SIW61345.1\|78814_79156_-	hypothetical protein	H6WXE7	Vibrio_phage	1.5e-14	39.3
SIW61346.1\|79958_80138_-	Phage protein	K4I0N5	Salmonella_phage	1.6e-28	98.3
SIW61347.1\|81409_82825_-	Phage protein	S4TV93	Salmonella_phage	7.6e-270	99.2
SIW61348.1\|82906_83278_-	Phage protein	S4TSP3	Salmonella_phage	2.8e-59	100.0
SIW61349.1\|83527_83689_+	Phage protein	A0A0F6TJ52	Escherichia_coli_O157_typing_phage	1.1e-23	100.0
SIW61350.1\|83897_84488_+	Phage protein	S4TPL8	Salmonella_phage	8.4e-106	99.0
SIW61351.1\|84535_84907_+	Phage protein	D2K0A3	Staphylococcus_phage	4.8e-67	99.2
SIW61352.1\|84903_85788_+	Phage protein	S4TPW2	Salmonella_phage	1.1e-160	98.3
SIW61353.1\|85787_86252_+	Phage lysin # Phage lysozyme or muramidase	A0A0H3UCP7	Escherichia_phage	3.9e-82	99.4
SIW61354.1\|86303_86702_+	Phage protein	A0A1B1PDY1	Salmonella_phage	5.0e-70	98.5
SIW61355.1\|86694_87090_+	Phage protein	A0A2H4YE38	Salmonella_virus	5.3e-72	97.7
SIW61356.1\|87089_87227_+	Phage protein	S4TUA4	Salmonella_phage	1.7e-17	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage