Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LT963391 Pseudomonas syringae pv. cerasicola isolate CFBP6109 genome assembly, chromosome: 1 3 crisprs csa3,DEDDh,cas3,DinG,PD-DExK,PrimPol 0 0 15 0
LT963394 Pseudomonas syringae pv. cerasicola isolate CFBP6109 genome assembly, plasmid: PP3 0 crisprs NA 0 0 1 0
LT963393 Pseudomonas syringae pv. cerasicola isolate CFBP6109 genome assembly, plasmid: PP2 0 crisprs NA 0 0 1 0
LT963392 Pseudomonas syringae pv. cerasicola isolate CFBP6109 genome assembly, plasmid: PP1 0 crisprs NA 0 0 2 0

Results visualization

1. LT963391
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LT963391_1 3871479-3871590 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LT963391_2 3896271-3896406 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LT963391_3 4803319-4803427 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 572372 : 591869 18 Burkholderia_phage(28.57%) transposase,integrase attL 580740:580799|attR 598199:599412
DBSCAN-SWA_2 624615 : 656704 28 Burkholderia_phage(36.36%) transposase,integrase attL 620913:620972|attR 663234:664454
DBSCAN-SWA_3 734605 : 752623 23 Enterobacteria_phage(50.0%) transposase NA
DBSCAN-SWA_4 1654272 : 1667889 11 Enterobacteria_phage(50.0%) transposase NA
DBSCAN-SWA_5 1897184 : 1905678 9 Enterobacteria_phage(22.22%) transposase NA
DBSCAN-SWA_6 2439141 : 2447036 10 Enterobacteria_phage(57.14%) transposase NA
DBSCAN-SWA_7 2693025 : 2769358 59 Enterobacteria_phage(19.05%) transposase,protease,integrase attL 2692976:2693035|attR 2697401:2698714
DBSCAN-SWA_8 3088999 : 3092921 6 uncultured_Caudovirales_phage(83.33%) NA NA
DBSCAN-SWA_9 4300193 : 4336726 46 Pseudomonas_phage(55.56%) tail,tRNA,plate NA
DBSCAN-SWA_10 4441377 : 4449157 9 Burkholderia_phage(57.14%) transposase NA
DBSCAN-SWA_11 4730678 : 4789976 59 Enterobacteria_phage(20.0%) transposase,tRNA,protease NA
DBSCAN-SWA_12 4859414 : 4865381 6 Burkholderia_phage(33.33%) transposase NA
DBSCAN-SWA_13 5336685 : 5389579 51 Enterobacteria_phage(41.18%) transposase,holin NA
DBSCAN-SWA_14 5484657 : 5520467 31 Enterobacteria_phage(42.86%) transposase NA
DBSCAN-SWA_15 5970289 : 5978835 7 Burkholderia_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. LT963394
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 44295 : 51344 7 Burkholderia_phage(33.33%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. LT963393
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 73035 : 81632 9 Enterobacteria_phage(28.57%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. LT963392
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 8800 : 50171 47 Enterobacteria_phage(50.0%) transposase,integrase attL 42299:42330|attR 49098:49129
DBSCAN-SWA_2 55576 : 106495 63 Burkholderia_phage(38.89%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage