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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LS991409 Lactobacillus delbrueckii subsp. lactis isolate Lactobacillus delbrueckii subsp. lactis1 genome assembly, chromosome: I 1 crisprs c2c9_V-U4,cas14k,cas14j,cas3,Cas14u_CAS-V,DEDDh,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,csa3,DinG,WYL 3 37 4 0

Results visualization

1. LS991409
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LS991409_2 818084-821281 TypeI-E I-B,III-A,III-B
52 spacers
DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
LS991409_2 2.17|819091|33|LS991409|CRISPRCasFinder,CRT,PILER-CR 819091-819123 33 LS991409.1 1157128-1157160 1 0.97
LS991409_4 4.1|1799729|36|LS991409|CRT 1799729-1799764 36 LS991409.1 1799675-1799710 2 0.944
LS991409_4 4.9|1800095|18|LS991409|CRT 1800095-1800112 18 LS991409.1 1799675-1799692 2 0.889

1. spacer 2.17|819091|33|LS991409|CRISPRCasFinder,CRT,PILER-CR matches to position: 1157128-1157160, mismatch: 1, identity: 0.97

aagcacccaatagcagagtatattaaaatccca	CRISPR spacer
aagtacccaatagcagagtatattaaaatccca	Protospacer
***.*****************************

2. spacer 4.1|1799729|36|LS991409|CRT matches to position: 1799675-1799710, mismatch: 2, identity: 0.944

ttagttgacttcttggtagtcttagctgccttcttg	CRISPR spacer
ttagttgacttcttagcagtcttagctgccttcttg	Protospacer
**************.*.*******************

3. spacer 4.9|1800095|18|LS991409|CRT matches to position: 1799675-1799692, mismatch: 2, identity: 0.889

ttagctgacttcttggca	CRISPR spacer
ttagttgacttcttagca	Protospacer
****.*********.***

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
LS991409_2 2.2|818173|33|LS991409|CRISPRCasFinder,CRT 818173-818205 33 KJ564038 Lactobacillus phage Ld3, complete genome 4083-4115 0 1.0
LS991409_2 2.2|818173|33|LS991409|CRISPRCasFinder,CRT 818173-818205 33 NC_019449 Lactobacillus phage c5, complete genome 5706-5738 0 1.0
LS991409_2 2.2|818173|33|LS991409|CRISPRCasFinder,CRT 818173-818205 33 KJ564037 Lactobacillus phage Ld17, complete genome 5454-5486 0 1.0
LS991409_2 2.8|818541|33|LS991409|CRISPRCasFinder,CRT,PILER-CR 818541-818573 33 NC_022775 Lactobacillus phage phiJB, complete genome 33598-33630 0 1.0
LS991409_2 2.8|818541|33|LS991409|CRISPRCasFinder,CRT,PILER-CR 818541-818573 33 CP031025 Lactobacillus phage ViSo-2018b, partial genome 10316-10348 0 1.0
LS991409_2 2.12|818786|33|LS991409|CRISPRCasFinder,CRT,PILER-CR 818786-818818 33 NC_022775 Lactobacillus phage phiJB, complete genome 4650-4682 0 1.0
LS991409_2 2.32|820003|33|LS991409|CRISPRCasFinder,CRT 820003-820035 33 NC_022775 Lactobacillus phage phiJB, complete genome 8901-8933 0 1.0
LS991409_2 2.44|820734|33|LS991409|CRISPRCasFinder,CRT 820734-820766 33 EF455602 Lactobacillus phage LL-H, complete genome 26248-26280 0 1.0
LS991409_2 2.48|820977|33|LS991409|CRISPRCasFinder,CRT 820977-821009 33 MG913376 Lactobacillus phage P1174, complete genome 5766-5798 0 1.0
LS991409_2 2.48|820977|33|LS991409|CRISPRCasFinder,CRT 820977-821009 33 KJ564038 Lactobacillus phage Ld3, complete genome 5998-6030 0 1.0
LS991409_2 2.48|820977|33|LS991409|CRISPRCasFinder,CRT 820977-821009 33 KJ564036 Lactobacillus phage Ld25A, complete genome 6400-6432 0 1.0
LS991409_2 2.48|820977|33|LS991409|CRISPRCasFinder,CRT 820977-821009 33 KJ564037 Lactobacillus phage Ld17, complete genome 7354-7386 0 1.0
LS991409_2 2.49|821038|33|LS991409|CRISPRCasFinder,CRT 821038-821070 33 MG913376 Lactobacillus phage P1174, complete genome 3559-3591 0 1.0
LS991409_2 2.49|821038|33|LS991409|CRISPRCasFinder,CRT 821038-821070 33 NC_022762 Lactobacillus phage phiLdb, complete genome 6093-6125 0 1.0
LS991409_2 2.66|820016|33|LS991409|PILER-CR 820016-820048 33 NC_022775 Lactobacillus phage phiJB, complete genome 8901-8933 0 1.0
LS991409_2 2.78|820759|33|LS991409|PILER-CR 820759-820791 33 EF455602 Lactobacillus phage LL-H, complete genome 26248-26280 0 1.0
LS991409_2 2.82|821008|33|LS991409|PILER-CR 821008-821040 33 MG913376 Lactobacillus phage P1174, complete genome 5766-5798 0 1.0
LS991409_2 2.82|821008|33|LS991409|PILER-CR 821008-821040 33 KJ564038 Lactobacillus phage Ld3, complete genome 5998-6030 0 1.0
LS991409_2 2.82|821008|33|LS991409|PILER-CR 821008-821040 33 KJ564036 Lactobacillus phage Ld25A, complete genome 6400-6432 0 1.0
LS991409_2 2.82|821008|33|LS991409|PILER-CR 821008-821040 33 KJ564037 Lactobacillus phage Ld17, complete genome 7354-7386 0 1.0
LS991409_2 2.83|821069|33|LS991409|PILER-CR 821069-821101 33 MG913376 Lactobacillus phage P1174, complete genome 3559-3591 0 1.0
LS991409_2 2.83|821069|33|LS991409|PILER-CR 821069-821101 33 NC_022762 Lactobacillus phage phiLdb, complete genome 6093-6125 0 1.0
LS991409_2 2.10|818664|33|LS991409|CRISPRCasFinder,CRT,PILER-CR 818664-818696 33 NC_022775 Lactobacillus phage phiJB, complete genome 756-788 1 0.97
LS991409_2 2.12|818786|33|LS991409|CRISPRCasFinder,CRT,PILER-CR 818786-818818 33 CP031025 Lactobacillus phage ViSo-2018b, partial genome 38496-38528 1 0.97
LS991409_2 2.48|820977|33|LS991409|CRISPRCasFinder,CRT 820977-821009 33 NC_019449 Lactobacillus phage c5, complete genome 7606-7638 1 0.97
LS991409_2 2.49|821038|33|LS991409|CRISPRCasFinder,CRT 821038-821070 33 KJ564038 Lactobacillus phage Ld3, complete genome 3776-3808 1 0.97
LS991409_2 2.49|821038|33|LS991409|CRISPRCasFinder,CRT 821038-821070 33 KJ564036 Lactobacillus phage Ld25A, complete genome 4202-4234 1 0.97
LS991409_2 2.49|821038|33|LS991409|CRISPRCasFinder,CRT 821038-821070 33 NC_022989 Lactobacillus phage LL-Ku, complete genome 5233-5265 1 0.97
LS991409_2 2.49|821038|33|LS991409|CRISPRCasFinder,CRT 821038-821070 33 NC_019449 Lactobacillus phage c5, complete genome 5399-5431 1 0.97
LS991409_2 2.82|821008|33|LS991409|PILER-CR 821008-821040 33 NC_019449 Lactobacillus phage c5, complete genome 7606-7638 1 0.97
LS991409_2 2.83|821069|33|LS991409|PILER-CR 821069-821101 33 KJ564038 Lactobacillus phage Ld3, complete genome 3776-3808 1 0.97
LS991409_2 2.83|821069|33|LS991409|PILER-CR 821069-821101 33 KJ564036 Lactobacillus phage Ld25A, complete genome 4202-4234 1 0.97
LS991409_2 2.83|821069|33|LS991409|PILER-CR 821069-821101 33 NC_022989 Lactobacillus phage LL-Ku, complete genome 5233-5265 1 0.97
LS991409_2 2.83|821069|33|LS991409|PILER-CR 821069-821101 33 NC_019449 Lactobacillus phage c5, complete genome 5399-5431 1 0.97
LS991409_2 2.1|818112|33|LS991409|CRISPRCasFinder,CRT 818112-818144 33 CP031025 Lactobacillus phage ViSo-2018b, partial genome 36279-36311 2 0.939
LS991409_2 2.1|818112|33|LS991409|CRISPRCasFinder,CRT 818112-818144 33 NC_022775 Lactobacillus phage phiJB, complete genome 7643-7675 2 0.939
LS991409_2 2.2|818173|33|LS991409|CRISPRCasFinder,CRT 818173-818205 33 NC_022989 Lactobacillus phage LL-Ku, complete genome 5540-5572 2 0.939
LS991409_2 2.5|818356|34|LS991409|CRISPRCasFinder,CRT 818356-818389 34 MG913376 Lactobacillus phage P1174, complete genome 22907-22940 2 0.941
LS991409_2 2.6|818418|34|LS991409|CRISPRCasFinder,CRT 818418-818451 34 EF455602 Lactobacillus phage LL-H, complete genome 32188-32221 2 0.941
LS991409_2 2.7|818480|33|LS991409|CRISPRCasFinder,CRT 818480-818512 33 NC_022775 Lactobacillus phage phiJB, complete genome 808-840 2 0.939
LS991409_2 2.12|818786|33|LS991409|CRISPRCasFinder,CRT,PILER-CR 818786-818818 33 CP031025 Lactobacillus phage ViSo-2018b, partial genome 2191-2223 2 0.939
LS991409_2 2.48|820977|33|LS991409|CRISPRCasFinder,CRT 820977-821009 33 NC_022762 Lactobacillus phage phiLdb, complete genome 8299-8331 2 0.939
LS991409_2 2.48|820977|33|LS991409|CRISPRCasFinder,CRT 820977-821009 33 NC_022989 Lactobacillus phage LL-Ku, complete genome 7441-7473 2 0.939
LS991409_2 2.49|821038|33|LS991409|CRISPRCasFinder,CRT 821038-821070 33 KJ564037 Lactobacillus phage Ld17, complete genome 5147-5179 2 0.939
LS991409_2 2.51|821160|33|LS991409|CRISPRCasFinder,CRT 821160-821192 33 CP031025 Lactobacillus phage ViSo-2018b, partial genome 40238-40270 2 0.939
LS991409_2 2.54|818364|32|LS991409|PILER-CR 818364-818395 32 MG913376 Lactobacillus phage P1174, complete genome 22909-22940 2 0.938
LS991409_2 2.82|821008|33|LS991409|PILER-CR 821008-821040 33 NC_022762 Lactobacillus phage phiLdb, complete genome 8299-8331 2 0.939
LS991409_2 2.82|821008|33|LS991409|PILER-CR 821008-821040 33 NC_022989 Lactobacillus phage LL-Ku, complete genome 7441-7473 2 0.939
LS991409_2 2.83|821069|33|LS991409|PILER-CR 821069-821101 33 KJ564037 Lactobacillus phage Ld17, complete genome 5147-5179 2 0.939
LS991409_2 2.85|821191|33|LS991409|PILER-CR 821191-821223 33 CP031025 Lactobacillus phage ViSo-2018b, partial genome 40238-40270 2 0.939
LS991409_2 2.53|818303|25|LS991409|PILER-CR 818303-818327 25 KP054477 Lactobacillus phage LfeInf, complete genome 73267-73291 3 0.88
LS991409_4 4.4|1799885|24|LS991409|CRT 1799885-1799908 24 NZ_CP024394 Borrelia miyamotoi strain Izh-4 plasmid pIzh4-2 7008-7031 3 0.875
LS991409_4 4.4|1799885|24|LS991409|CRT 1799885-1799908 24 NZ_CP024319 Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-lp23, complete sequence 6942-6965 3 0.875
LS991409_4 4.4|1799885|24|LS991409|CRT 1799885-1799908 24 NZ_CP024396 Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp29, complete sequence 7057-7080 3 0.875
LS991409_4 4.4|1799885|24|LS991409|CRT 1799885-1799908 24 NZ_CP024212 Borrelia miyamotoi strain Izh-5 plasmid pIzh5-5 7073-7096 3 0.875
LS991409_4 4.4|1799885|24|LS991409|CRT 1799885-1799908 24 NZ_CP024354 Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp41-1, complete sequence 7165-7188 3 0.875
LS991409_4 4.4|1799885|24|LS991409|CRT 1799885-1799908 24 NZ_CP024359 Borrelia miyamotoi strain Izh-16 plasmid pIzh16-5 7108-7131 3 0.875
LS991409_2 2.13|818847|33|LS991409|CRISPRCasFinder,CRT,PILER-CR 818847-818879 33 NZ_CP031108 Escherichia coli strain AMSCJX02 plasmid pAMSC3, complete sequence 11326-11358 4 0.879
LS991409_2 2.13|818847|33|LS991409|CRISPRCasFinder,CRT,PILER-CR 818847-818879 33 NZ_CP031108 Escherichia coli strain AMSCJX02 plasmid pAMSC3, complete sequence 15837-15869 4 0.879
LS991409_2 2.41|820552|33|LS991409|CRISPRCasFinder,CRT 820552-820584 33 MH616963 CrAssphage sp. isolate ctbg_1, complete genome 50952-50984 5 0.848
LS991409_2 2.75|820571|33|LS991409|PILER-CR 820571-820603 33 MH616963 CrAssphage sp. isolate ctbg_1, complete genome 50952-50984 5 0.848
LS991409_2 2.27|819699|32|LS991409|CRISPRCasFinder,CRT 819699-819730 32 MT932211 Escherichia phage VEcB, complete genome 24258-24289 6 0.812
LS991409_2 2.27|819699|32|LS991409|CRISPRCasFinder,CRT 819699-819730 32 MN850573 Escherichia phage muut, complete genome 37631-37662 6 0.812
LS991409_2 2.27|819699|32|LS991409|CRISPRCasFinder,CRT 819699-819730 32 MN850601 Escherichia phage inny, complete genome 17674-17705 6 0.812
LS991409_2 2.27|819699|32|LS991409|CRISPRCasFinder,CRT 819699-819730 32 MN850584 Escherichia phage arall, complete genome 102999-103030 6 0.812
LS991409_2 2.61|819712|32|LS991409|PILER-CR 819712-819743 32 MT932211 Escherichia phage VEcB, complete genome 24258-24289 6 0.812
LS991409_2 2.61|819712|32|LS991409|PILER-CR 819712-819743 32 MN850573 Escherichia phage muut, complete genome 37631-37662 6 0.812
LS991409_2 2.61|819712|32|LS991409|PILER-CR 819712-819743 32 MN850601 Escherichia phage inny, complete genome 17674-17705 6 0.812
LS991409_2 2.61|819712|32|LS991409|PILER-CR 819712-819743 32 MN850584 Escherichia phage arall, complete genome 102999-103030 6 0.812
LS991409_4 4.5|1799927|30|LS991409|CRT 1799927-1799956 30 MK757446 Mycobacterium phage Candle, complete genome 6200-6229 6 0.8
LS991409_4 4.5|1799927|30|LS991409|CRT 1799927-1799956 30 KY969628 Mycobacterium phage Zenon, complete genome 6202-6231 6 0.8
LS991409_4 4.5|1799927|30|LS991409|CRT 1799927-1799956 30 MH001447 Mycobacterium phage Nilo, complete genome 6200-6229 6 0.8
LS991409_4 4.5|1799927|30|LS991409|CRT 1799927-1799956 30 JF704112 Mycobacterium phage Send513, complete sequence 6200-6229 6 0.8
LS991409_4 4.5|1799927|30|LS991409|CRT 1799927-1799956 30 NC_022053 Mycobacterium phage Papyrus, complete genome 5859-5888 6 0.8
LS991409_4 4.5|1799927|30|LS991409|CRT 1799927-1799956 30 KT591076 Mycobacterium phage Weiss13, complete genome 5889-5918 6 0.8
LS991409_2 2.21|819335|32|LS991409|CRISPRCasFinder,CRT 819335-819366 32 NZ_CP016083 Streptomyces sp. SAT1 plasmid unnamed3, complete sequence 563877-563908 7 0.781
LS991409_2 2.21|819335|32|LS991409|CRISPRCasFinder,CRT 819335-819366 32 NZ_CP016500 Agrobacterium sp. RAC06 plasmid pBSY240_1, complete sequence 52125-52156 7 0.781
LS991409_2 2.21|819335|32|LS991409|CRISPRCasFinder,CRT 819335-819366 32 NZ_CP045856 Agrobacterium sp. MA01 plasmid punanmed2, complete sequence 127244-127275 7 0.781
LS991409_2 2.26|819639|32|LS991409|CRISPRCasFinder,CRT 819639-819670 32 MK809530 Salmonella phage vB_SenS_SB6, complete genome 60059-60090 7 0.781
LS991409_2 2.26|819639|32|LS991409|CRISPRCasFinder,CRT 819639-819670 32 MF431738 Bacteriophage T5-like poul149, complete genome 59352-59383 7 0.781
LS991409_2 2.26|819639|32|LS991409|CRISPRCasFinder,CRT 819639-819670 32 MG065642 UNVERIFIED: Campylobacter phage A148, complete genome 97809-97840 7 0.781
LS991409_2 2.26|819639|32|LS991409|CRISPRCasFinder,CRT 819639-819670 32 MF431736 Bacteriophage T5-like chee130_1, complete genome 59352-59383 7 0.781
LS991409_2 2.26|819639|32|LS991409|CRISPRCasFinder,CRT 819639-819670 32 MT653145 Salmonella phage 8sent65, complete genome 60011-60042 7 0.781
LS991409_2 2.26|819639|32|LS991409|CRISPRCasFinder,CRT 819639-819670 32 MF431737 Bacteriophage T5-like saus132, complete genome 59352-59383 7 0.781
LS991409_2 2.26|819639|32|LS991409|CRISPRCasFinder,CRT 819639-819670 32 MF431739 Bacteriophage T5-like chee158, complete genome 59352-59383 7 0.781
LS991409_2 2.26|819639|32|LS991409|CRISPRCasFinder,CRT 819639-819670 32 MF431740 Bacteriophage T5-like cott162, complete genome 59352-59383 7 0.781
LS991409_2 2.26|819639|32|LS991409|CRISPRCasFinder,CRT 819639-819670 32 MF431741 Bacteriophage T5-like saus176N, complete genome 59352-59383 7 0.781
LS991409_2 2.26|819639|32|LS991409|CRISPRCasFinder,CRT 819639-819670 32 NC_048866 Salmonella phage bombadil, complete genome 59852-59883 7 0.781
LS991409_4 4.8|1800047|30|LS991409|CRT 1800047-1800076 30 KX077891 Streptococcus phage phiJH1301-1, complete genome 31480-31509 7 0.767
LS991409_4 4.8|1800047|30|LS991409|CRT 1800047-1800076 30 NZ_CP026273 Klebsiella oxytoca strain KONIH4 plasmid pKOX-ea2b, complete sequence 144198-144227 7 0.767
LS991409_2 2.8|818541|33|LS991409|CRISPRCasFinder,CRT,PILER-CR 818541-818573 33 NZ_LR594673 Variovorax sp. PBL-E5 plasmid 3 204376-204408 8 0.758
LS991409_2 2.41|820552|33|LS991409|CRISPRCasFinder,CRT 820552-820584 33 NZ_CP031270 Staphylococcus warneri strain 16A plasmid unnamed1, complete sequence 10812-10844 8 0.758
LS991409_2 2.41|820552|33|LS991409|CRISPRCasFinder,CRT 820552-820584 33 NZ_CP031270 Staphylococcus warneri strain 16A plasmid unnamed1, complete sequence 19211-19243 8 0.758
LS991409_2 2.46|820855|33|LS991409|CRISPRCasFinder,CRT 820855-820887 33 MK931297 Escherichia phage vB_EcoP_3HA13, complete genome 58652-58684 8 0.758
LS991409_2 2.46|820855|33|LS991409|CRISPRCasFinder,CRT 820855-820887 33 MH992123 UNVERIFIED: Escherichia phage OLB145, complete genome 58684-58716 8 0.758
LS991409_2 2.52|821221|33|LS991409|CRISPRCasFinder,CRT 821221-821253 33 AP013386 Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C23-MedDCM-OCT-S37-C51 26599-26631 8 0.758
LS991409_2 2.54|818364|32|LS991409|PILER-CR 818364-818395 32 NC_007968 Psychrobacter cryohalolentis K5 plasmid 1, complete sequence 13713-13744 8 0.75
LS991409_2 2.54|818364|32|LS991409|PILER-CR 818364-818395 32 NZ_CP022042 Psychrobacter cryohalolentis strain FDAARGOS_308 plasmid unnamed1, complete sequence 12268-12299 8 0.75
LS991409_2 2.54|818364|32|LS991409|PILER-CR 818364-818395 32 MF417908 Uncultured Caudovirales phage clone 10S_1, partial genome 30863-30894 8 0.75
LS991409_2 2.75|820571|33|LS991409|PILER-CR 820571-820603 33 NZ_CP031270 Staphylococcus warneri strain 16A plasmid unnamed1, complete sequence 10812-10844 8 0.758
LS991409_2 2.75|820571|33|LS991409|PILER-CR 820571-820603 33 NZ_CP031270 Staphylococcus warneri strain 16A plasmid unnamed1, complete sequence 19211-19243 8 0.758
LS991409_2 2.80|820886|33|LS991409|PILER-CR 820886-820918 33 MK931297 Escherichia phage vB_EcoP_3HA13, complete genome 58652-58684 8 0.758
LS991409_2 2.80|820886|33|LS991409|PILER-CR 820886-820918 33 MH992123 UNVERIFIED: Escherichia phage OLB145, complete genome 58684-58716 8 0.758
LS991409_4 4.5|1799927|30|LS991409|CRT 1799927-1799956 30 NC_048139 Streptomyces phage Hiyaa, complete genome 3798-3827 8 0.733
LS991409_4 4.5|1799927|30|LS991409|CRT 1799927-1799956 30 LR743524 Xylella phage Bacata genome assembly, chromosome: 1 32791-32820 8 0.733
LS991409_2 2.5|818356|34|LS991409|CRISPRCasFinder,CRT 818356-818389 34 MF417908 Uncultured Caudovirales phage clone 10S_1, partial genome 30861-30894 9 0.735
LS991409_2 2.8|818541|33|LS991409|CRISPRCasFinder,CRT,PILER-CR 818541-818573 33 NZ_CP012477 Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence 675760-675792 9 0.727
LS991409_2 2.13|818847|33|LS991409|CRISPRCasFinder,CRT,PILER-CR 818847-818879 33 NZ_CP024314 Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence 1539774-1539806 9 0.727
LS991409_2 2.21|819335|32|LS991409|CRISPRCasFinder,CRT 819335-819366 32 MT270409 Phaeobacter phage MD18, complete genome 121833-121864 9 0.719
LS991409_2 2.26|819639|32|LS991409|CRISPRCasFinder,CRT 819639-819670 32 LR597659 Escherichia phage T5_ev212 genome assembly, chromosome: 1 56053-56084 9 0.719
LS991409_2 2.26|819639|32|LS991409|CRISPRCasFinder,CRT 819639-819670 32 MT311645 Salmonella phage vB_Sen-E22, complete genome 99313-99344 9 0.719
LS991409_2 2.26|819639|32|LS991409|CRISPRCasFinder,CRT 819639-819670 32 MT074463 Salmonella phage gmork, complete genome 62618-62649 9 0.719
LS991409_2 2.26|819639|32|LS991409|CRISPRCasFinder,CRT 819639-819670 32 MK770410 Salmonella phage SE3, complete genome 55730-55761 9 0.719
LS991409_2 2.26|819639|32|LS991409|CRISPRCasFinder,CRT 819639-819670 32 MK972708 Salmonella phage SE7, complete genome 57530-57561 9 0.719
LS991409_2 2.26|819639|32|LS991409|CRISPRCasFinder,CRT 819639-819670 32 NC_048010 Salmonella phage S132, complete genome 53184-53215 9 0.719
LS991409_2 2.26|819639|32|LS991409|CRISPRCasFinder,CRT 819639-819670 32 MK005300 Salmonella phage STG2, complete genome 50849-50880 9 0.719
LS991409_2 2.28|819759|33|LS991409|CRISPRCasFinder,CRT 819759-819791 33 CP031732 Stenotrophomonas rhizophila strain GA1 plasmid unnamed3, complete sequence 187099-187131 9 0.727
LS991409_2 2.28|819759|33|LS991409|CRISPRCasFinder,CRT 819759-819791 33 NZ_CP029094 Pseudomonas aeruginosa strain AR441 plasmid unnamed3, complete sequence 267893-267925 9 0.727
LS991409_2 2.28|819759|33|LS991409|CRISPRCasFinder,CRT 819759-819791 33 NZ_CP027170 Pseudomonas aeruginosa strain AR_0356 plasmid unnamed2, complete sequence 91050-91082 9 0.727
LS991409_2 2.40|820491|33|LS991409|CRISPRCasFinder,CRT 820491-820523 33 NZ_CP032268 Acinetobacter sp. WCHAc010034 plasmid p1_010034, complete sequence 38639-38671 9 0.727
LS991409_2 2.41|820552|33|LS991409|CRISPRCasFinder,CRT 820552-820584 33 MG744354 Lactobacillus phage Satyr, complete genome 78607-78639 9 0.727
LS991409_2 2.51|821160|33|LS991409|CRISPRCasFinder,CRT 821160-821192 33 NZ_CP029232 Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence 1452964-1452996 9 0.727
LS991409_2 2.51|821160|33|LS991409|CRISPRCasFinder,CRT 821160-821192 33 NZ_CP039426 Citricoccus sp. SGAir0253 plasmid unnamed2, complete sequence 33689-33721 9 0.727
LS991409_2 2.51|821160|33|LS991409|CRISPRCasFinder,CRT 821160-821192 33 NZ_CP039431 Citricoccus sp. SGAir0453 plasmid unnamed2, complete sequence 33689-33721 9 0.727
LS991409_2 2.62|819772|33|LS991409|PILER-CR 819772-819804 33 CP031732 Stenotrophomonas rhizophila strain GA1 plasmid unnamed3, complete sequence 187099-187131 9 0.727
LS991409_2 2.62|819772|33|LS991409|PILER-CR 819772-819804 33 NZ_CP029094 Pseudomonas aeruginosa strain AR441 plasmid unnamed3, complete sequence 267893-267925 9 0.727
LS991409_2 2.62|819772|33|LS991409|PILER-CR 819772-819804 33 NZ_CP027170 Pseudomonas aeruginosa strain AR_0356 plasmid unnamed2, complete sequence 91050-91082 9 0.727
LS991409_2 2.74|820510|33|LS991409|PILER-CR 820510-820542 33 NZ_CP032268 Acinetobacter sp. WCHAc010034 plasmid p1_010034, complete sequence 38639-38671 9 0.727
LS991409_2 2.75|820571|33|LS991409|PILER-CR 820571-820603 33 MG744354 Lactobacillus phage Satyr, complete genome 78607-78639 9 0.727
LS991409_2 2.85|821191|33|LS991409|PILER-CR 821191-821223 33 NZ_CP029232 Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence 1452964-1452996 9 0.727
LS991409_2 2.85|821191|33|LS991409|PILER-CR 821191-821223 33 NZ_CP039426 Citricoccus sp. SGAir0253 plasmid unnamed2, complete sequence 33689-33721 9 0.727
LS991409_2 2.85|821191|33|LS991409|PILER-CR 821191-821223 33 NZ_CP039431 Citricoccus sp. SGAir0453 plasmid unnamed2, complete sequence 33689-33721 9 0.727
LS991409_4 4.5|1799927|30|LS991409|CRT 1799927-1799956 30 MH622920 Podoviridae sp. isolate ctda_1, complete genome 69864-69893 9 0.7
LS991409_4 4.5|1799927|30|LS991409|CRT 1799927-1799956 30 NZ_LR134469 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 27, complete sequence 3267-3296 9 0.7
LS991409_2 2.8|818541|33|LS991409|CRISPRCasFinder,CRT,PILER-CR 818541-818573 33 NZ_CP030772 Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence 290650-290682 10 0.697
LS991409_4 4.5|1799927|30|LS991409|CRT 1799927-1799956 30 NZ_CP045339 Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence 1457402-1457431 10 0.667

1. spacer 2.2|818173|33|LS991409|CRISPRCasFinder,CRT matches to KJ564038 (Lactobacillus phage Ld3, complete genome) position: , mismatch: 0, identity: 1.0

tatgttatttaaccaaaaggaattaaccgaaca	CRISPR spacer
tatgttatttaaccaaaaggaattaaccgaaca	Protospacer
*********************************

2. spacer 2.2|818173|33|LS991409|CRISPRCasFinder,CRT matches to NC_019449 (Lactobacillus phage c5, complete genome) position: , mismatch: 0, identity: 1.0

tatgttatttaaccaaaaggaattaaccgaaca	CRISPR spacer
tatgttatttaaccaaaaggaattaaccgaaca	Protospacer
*********************************

3. spacer 2.2|818173|33|LS991409|CRISPRCasFinder,CRT matches to KJ564037 (Lactobacillus phage Ld17, complete genome) position: , mismatch: 0, identity: 1.0

tatgttatttaaccaaaaggaattaaccgaaca	CRISPR spacer
tatgttatttaaccaaaaggaattaaccgaaca	Protospacer
*********************************

4. spacer 2.8|818541|33|LS991409|CRISPRCasFinder,CRT,PILER-CR matches to NC_022775 (Lactobacillus phage phiJB, complete genome) position: , mismatch: 0, identity: 1.0

tcatcaagtgcgccgccatcaaagcccttcgtg	CRISPR spacer
tcatcaagtgcgccgccatcaaagcccttcgtg	Protospacer
*********************************

5. spacer 2.8|818541|33|LS991409|CRISPRCasFinder,CRT,PILER-CR matches to CP031025 (Lactobacillus phage ViSo-2018b, partial genome) position: , mismatch: 0, identity: 1.0

tcatcaagtgcgccgccatcaaagcccttcgtg	CRISPR spacer
tcatcaagtgcgccgccatcaaagcccttcgtg	Protospacer
*********************************

6. spacer 2.12|818786|33|LS991409|CRISPRCasFinder,CRT,PILER-CR matches to NC_022775 (Lactobacillus phage phiJB, complete genome) position: , mismatch: 0, identity: 1.0

tatcgaaaatacacggctatctgaggagcttga	CRISPR spacer
tatcgaaaatacacggctatctgaggagcttga	Protospacer
*********************************

7. spacer 2.32|820003|33|LS991409|CRISPRCasFinder,CRT matches to NC_022775 (Lactobacillus phage phiJB, complete genome) position: , mismatch: 0, identity: 1.0

cccagctaaaagaccaatcccgccagtcaaaag	CRISPR spacer
cccagctaaaagaccaatcccgccagtcaaaag	Protospacer
*********************************

8. spacer 2.44|820734|33|LS991409|CRISPRCasFinder,CRT matches to EF455602 (Lactobacillus phage LL-H, complete genome) position: , mismatch: 0, identity: 1.0

tcgtttctggtgttgcgtacgccccgtgcttgc	CRISPR spacer
tcgtttctggtgttgcgtacgccccgtgcttgc	Protospacer
*********************************

9. spacer 2.48|820977|33|LS991409|CRISPRCasFinder,CRT matches to MG913376 (Lactobacillus phage P1174, complete genome) position: , mismatch: 0, identity: 1.0

ttcaagtgcttccaatcgtgacatgacgattag	CRISPR spacer
ttcaagtgcttccaatcgtgacatgacgattag	Protospacer
*********************************

10. spacer 2.48|820977|33|LS991409|CRISPRCasFinder,CRT matches to KJ564038 (Lactobacillus phage Ld3, complete genome) position: , mismatch: 0, identity: 1.0

ttcaagtgcttccaatcgtgacatgacgattag	CRISPR spacer
ttcaagtgcttccaatcgtgacatgacgattag	Protospacer
*********************************

11. spacer 2.48|820977|33|LS991409|CRISPRCasFinder,CRT matches to KJ564036 (Lactobacillus phage Ld25A, complete genome) position: , mismatch: 0, identity: 1.0

ttcaagtgcttccaatcgtgacatgacgattag	CRISPR spacer
ttcaagtgcttccaatcgtgacatgacgattag	Protospacer
*********************************

12. spacer 2.48|820977|33|LS991409|CRISPRCasFinder,CRT matches to KJ564037 (Lactobacillus phage Ld17, complete genome) position: , mismatch: 0, identity: 1.0

ttcaagtgcttccaatcgtgacatgacgattag	CRISPR spacer
ttcaagtgcttccaatcgtgacatgacgattag	Protospacer
*********************************

13. spacer 2.49|821038|33|LS991409|CRISPRCasFinder,CRT matches to MG913376 (Lactobacillus phage P1174, complete genome) position: , mismatch: 0, identity: 1.0

cttactggttggagctttggcttcaccgacaga	CRISPR spacer
cttactggttggagctttggcttcaccgacaga	Protospacer
*********************************

14. spacer 2.49|821038|33|LS991409|CRISPRCasFinder,CRT matches to NC_022762 (Lactobacillus phage phiLdb, complete genome) position: , mismatch: 0, identity: 1.0

cttactggttggagctttggcttcaccgacaga	CRISPR spacer
cttactggttggagctttggcttcaccgacaga	Protospacer
*********************************

15. spacer 2.66|820016|33|LS991409|PILER-CR matches to NC_022775 (Lactobacillus phage phiJB, complete genome) position: , mismatch: 0, identity: 1.0

cccagctaaaagaccaatcccgccagtcaaaag	CRISPR spacer
cccagctaaaagaccaatcccgccagtcaaaag	Protospacer
*********************************

16. spacer 2.78|820759|33|LS991409|PILER-CR matches to EF455602 (Lactobacillus phage LL-H, complete genome) position: , mismatch: 0, identity: 1.0

tcgtttctggtgttgcgtacgccccgtgcttgc	CRISPR spacer
tcgtttctggtgttgcgtacgccccgtgcttgc	Protospacer
*********************************

17. spacer 2.82|821008|33|LS991409|PILER-CR matches to MG913376 (Lactobacillus phage P1174, complete genome) position: , mismatch: 0, identity: 1.0

ttcaagtgcttccaatcgtgacatgacgattag	CRISPR spacer
ttcaagtgcttccaatcgtgacatgacgattag	Protospacer
*********************************

18. spacer 2.82|821008|33|LS991409|PILER-CR matches to KJ564038 (Lactobacillus phage Ld3, complete genome) position: , mismatch: 0, identity: 1.0

ttcaagtgcttccaatcgtgacatgacgattag	CRISPR spacer
ttcaagtgcttccaatcgtgacatgacgattag	Protospacer
*********************************

19. spacer 2.82|821008|33|LS991409|PILER-CR matches to KJ564036 (Lactobacillus phage Ld25A, complete genome) position: , mismatch: 0, identity: 1.0

ttcaagtgcttccaatcgtgacatgacgattag	CRISPR spacer
ttcaagtgcttccaatcgtgacatgacgattag	Protospacer
*********************************

20. spacer 2.82|821008|33|LS991409|PILER-CR matches to KJ564037 (Lactobacillus phage Ld17, complete genome) position: , mismatch: 0, identity: 1.0

ttcaagtgcttccaatcgtgacatgacgattag	CRISPR spacer
ttcaagtgcttccaatcgtgacatgacgattag	Protospacer
*********************************

21. spacer 2.83|821069|33|LS991409|PILER-CR matches to MG913376 (Lactobacillus phage P1174, complete genome) position: , mismatch: 0, identity: 1.0

cttactggttggagctttggcttcaccgacaga	CRISPR spacer
cttactggttggagctttggcttcaccgacaga	Protospacer
*********************************

22. spacer 2.83|821069|33|LS991409|PILER-CR matches to NC_022762 (Lactobacillus phage phiLdb, complete genome) position: , mismatch: 0, identity: 1.0

cttactggttggagctttggcttcaccgacaga	CRISPR spacer
cttactggttggagctttggcttcaccgacaga	Protospacer
*********************************

23. spacer 2.10|818664|33|LS991409|CRISPRCasFinder,CRT,PILER-CR matches to NC_022775 (Lactobacillus phage phiJB, complete genome) position: , mismatch: 1, identity: 0.97

tatcggtgtcttgactgactacatgcaggcaga	CRISPR spacer
tatcggtgtcttgactgactacacgcaggcaga	Protospacer
***********************.*********

24. spacer 2.12|818786|33|LS991409|CRISPRCasFinder,CRT,PILER-CR matches to CP031025 (Lactobacillus phage ViSo-2018b, partial genome) position: , mismatch: 1, identity: 0.97

tatcgaaaatacacggctatctgaggagcttga	CRISPR spacer
tatcgaaaatacacggctatctgaggagcttaa	Protospacer
*******************************.*

25. spacer 2.48|820977|33|LS991409|CRISPRCasFinder,CRT matches to NC_019449 (Lactobacillus phage c5, complete genome) position: , mismatch: 1, identity: 0.97

ttcaagtgcttccaatcgtgacatgacgattag	CRISPR spacer
ttcaagtgcttccaatcgtgacatgacgattaa	Protospacer
********************************.

26. spacer 2.49|821038|33|LS991409|CRISPRCasFinder,CRT matches to KJ564038 (Lactobacillus phage Ld3, complete genome) position: , mismatch: 1, identity: 0.97

cttactggttggagctttggcttcaccgacaga	CRISPR spacer
cttactggttggagctttggattcaccgacaga	Protospacer
******************** ************

27. spacer 2.49|821038|33|LS991409|CRISPRCasFinder,CRT matches to KJ564036 (Lactobacillus phage Ld25A, complete genome) position: , mismatch: 1, identity: 0.97

cttactggttggagctttggcttcaccgacaga	CRISPR spacer
cttactggttggagctttggcttcactgacaga	Protospacer
**************************.******

28. spacer 2.49|821038|33|LS991409|CRISPRCasFinder,CRT matches to NC_022989 (Lactobacillus phage LL-Ku, complete genome) position: , mismatch: 1, identity: 0.97

cttactggttggagctttggcttcaccgacaga	CRISPR spacer
cttactggttggagctttggcttcactgacaga	Protospacer
**************************.******

29. spacer 2.49|821038|33|LS991409|CRISPRCasFinder,CRT matches to NC_019449 (Lactobacillus phage c5, complete genome) position: , mismatch: 1, identity: 0.97

cttactggttggagctttggcttcaccgacaga	CRISPR spacer
cttactggttggagctttggattcaccgacaga	Protospacer
******************** ************

30. spacer 2.82|821008|33|LS991409|PILER-CR matches to NC_019449 (Lactobacillus phage c5, complete genome) position: , mismatch: 1, identity: 0.97

ttcaagtgcttccaatcgtgacatgacgattag	CRISPR spacer
ttcaagtgcttccaatcgtgacatgacgattaa	Protospacer
********************************.

31. spacer 2.83|821069|33|LS991409|PILER-CR matches to KJ564038 (Lactobacillus phage Ld3, complete genome) position: , mismatch: 1, identity: 0.97

cttactggttggagctttggcttcaccgacaga	CRISPR spacer
cttactggttggagctttggattcaccgacaga	Protospacer
******************** ************

32. spacer 2.83|821069|33|LS991409|PILER-CR matches to KJ564036 (Lactobacillus phage Ld25A, complete genome) position: , mismatch: 1, identity: 0.97

cttactggttggagctttggcttcaccgacaga	CRISPR spacer
cttactggttggagctttggcttcactgacaga	Protospacer
**************************.******

33. spacer 2.83|821069|33|LS991409|PILER-CR matches to NC_022989 (Lactobacillus phage LL-Ku, complete genome) position: , mismatch: 1, identity: 0.97

cttactggttggagctttggcttcaccgacaga	CRISPR spacer
cttactggttggagctttggcttcactgacaga	Protospacer
**************************.******

34. spacer 2.83|821069|33|LS991409|PILER-CR matches to NC_019449 (Lactobacillus phage c5, complete genome) position: , mismatch: 1, identity: 0.97

cttactggttggagctttggcttcaccgacaga	CRISPR spacer
cttactggttggagctttggattcaccgacaga	Protospacer
******************** ************

35. spacer 2.1|818112|33|LS991409|CRISPRCasFinder,CRT matches to CP031025 (Lactobacillus phage ViSo-2018b, partial genome) position: , mismatch: 2, identity: 0.939

tgttgatttctcaaggctctttctttcggttat	CRISPR spacer
tgttgatttctcaaggctctttcttttggctat	Protospacer
**************************.**.***

36. spacer 2.1|818112|33|LS991409|CRISPRCasFinder,CRT matches to NC_022775 (Lactobacillus phage phiJB, complete genome) position: , mismatch: 2, identity: 0.939

tgttgatttctcaaggctctttctttcggttat	CRISPR spacer
tgttgatttctcaaggctctttcttttgtttat	Protospacer
**************************.* ****

37. spacer 2.2|818173|33|LS991409|CRISPRCasFinder,CRT matches to NC_022989 (Lactobacillus phage LL-Ku, complete genome) position: , mismatch: 2, identity: 0.939

tatgttatttaaccaaaaggaattaaccgaaca	CRISPR spacer
aatgttatttaaccaaaaggaattaatcgaaca	Protospacer
 *************************.******

38. spacer 2.5|818356|34|LS991409|CRISPRCasFinder,CRT matches to MG913376 (Lactobacillus phage P1174, complete genome) position: , mismatch: 2, identity: 0.941

ttgtggatacccctattaacaaaaaagacgaggg	CRISPR spacer
ttgtggacacccctattaacaaaaatgacgaggg	Protospacer
*******.***************** ********

39. spacer 2.6|818418|34|LS991409|CRISPRCasFinder,CRT matches to EF455602 (Lactobacillus phage LL-H, complete genome) position: , mismatch: 2, identity: 0.941

ttttggccaacaggggcagttcacggcactaaca	CRISPR spacer
ttttggccaacaggggcagttcacggcaccagca	Protospacer
*****************************.*.**

40. spacer 2.7|818480|33|LS991409|CRISPRCasFinder,CRT matches to NC_022775 (Lactobacillus phage phiJB, complete genome) position: , mismatch: 2, identity: 0.939

tacacgtggtctagactcaagggggatgctggt	CRISPR spacer
tacacgtggtcaagactcaagggtgatgctggt	Protospacer
*********** *********** *********

41. spacer 2.12|818786|33|LS991409|CRISPRCasFinder,CRT,PILER-CR matches to CP031025 (Lactobacillus phage ViSo-2018b, partial genome) position: , mismatch: 2, identity: 0.939

tatcgaaaatacacggctatctgaggagcttga	CRISPR spacer
tatcgaaaatacacggctatctgaggagctttc	Protospacer
*******************************  

42. spacer 2.48|820977|33|LS991409|CRISPRCasFinder,CRT matches to NC_022762 (Lactobacillus phage phiLdb, complete genome) position: , mismatch: 2, identity: 0.939

ttcaagtgcttccaatcgtgacatgacgattag	CRISPR spacer
ttctaatgcttccaatcgtgacatgacgattag	Protospacer
*** *.***************************

43. spacer 2.48|820977|33|LS991409|CRISPRCasFinder,CRT matches to NC_022989 (Lactobacillus phage LL-Ku, complete genome) position: , mismatch: 2, identity: 0.939

ttcaagtgcttccaatcgtgacatgacgattag	CRISPR spacer
ttcaagtgcttccaaccgtaacatgacgattag	Protospacer
***************.***.*************

44. spacer 2.49|821038|33|LS991409|CRISPRCasFinder,CRT matches to KJ564037 (Lactobacillus phage Ld17, complete genome) position: , mismatch: 2, identity: 0.939

cttactggttggagctttggcttcaccgacaga	CRISPR spacer
ctaactggttggagctttggattcaccgacaga	Protospacer
** ***************** ************

45. spacer 2.51|821160|33|LS991409|CRISPRCasFinder,CRT matches to CP031025 (Lactobacillus phage ViSo-2018b, partial genome) position: , mismatch: 2, identity: 0.939

ccaggcggaaccggtcggcacaccgttcgtgca	CRISPR spacer
ccaagcggaaccggtcggcacgccgttcgtgca	Protospacer
***.*****************.***********

46. spacer 2.54|818364|32|LS991409|PILER-CR matches to MG913376 (Lactobacillus phage P1174, complete genome) position: , mismatch: 2, identity: 0.938

gtggatacccctattaacaaaaaagacgaggg	CRISPR spacer
gtggacacccctattaacaaaaatgacgaggg	Protospacer
*****.***************** ********

47. spacer 2.82|821008|33|LS991409|PILER-CR matches to NC_022762 (Lactobacillus phage phiLdb, complete genome) position: , mismatch: 2, identity: 0.939

ttcaagtgcttccaatcgtgacatgacgattag	CRISPR spacer
ttctaatgcttccaatcgtgacatgacgattag	Protospacer
*** *.***************************

48. spacer 2.82|821008|33|LS991409|PILER-CR matches to NC_022989 (Lactobacillus phage LL-Ku, complete genome) position: , mismatch: 2, identity: 0.939

ttcaagtgcttccaatcgtgacatgacgattag	CRISPR spacer
ttcaagtgcttccaaccgtaacatgacgattag	Protospacer
***************.***.*************

49. spacer 2.83|821069|33|LS991409|PILER-CR matches to KJ564037 (Lactobacillus phage Ld17, complete genome) position: , mismatch: 2, identity: 0.939

cttactggttggagctttggcttcaccgacaga	CRISPR spacer
ctaactggttggagctttggattcaccgacaga	Protospacer
** ***************** ************

50. spacer 2.85|821191|33|LS991409|PILER-CR matches to CP031025 (Lactobacillus phage ViSo-2018b, partial genome) position: , mismatch: 2, identity: 0.939

ccaggcggaaccggtcggcacaccgttcgtgca	CRISPR spacer
ccaagcggaaccggtcggcacgccgttcgtgca	Protospacer
***.*****************.***********

51. spacer 2.53|818303|25|LS991409|PILER-CR matches to KP054477 (Lactobacillus phage LfeInf, complete genome) position: , mismatch: 3, identity: 0.88

tttaccacccggccaagtaaaggtg	CRISPR spacer
tttaccacttggccaagtaaaggta	Protospacer
********..**************.

52. spacer 4.4|1799885|24|LS991409|CRT matches to NZ_CP024394 (Borrelia miyamotoi strain Izh-4 plasmid pIzh4-2) position: , mismatch: 3, identity: 0.875

ttagtgctcttagctaccttctta	CRISPR spacer
atcgtgctcttagctaccttccta	Protospacer
 * ******************.**

53. spacer 4.4|1799885|24|LS991409|CRT matches to NZ_CP024319 (Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-lp23, complete sequence) position: , mismatch: 3, identity: 0.875

ttagtgctcttagctaccttctta	CRISPR spacer
atcgtgctcttagctaccttccta	Protospacer
 * ******************.**

54. spacer 4.4|1799885|24|LS991409|CRT matches to NZ_CP024396 (Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp29, complete sequence) position: , mismatch: 3, identity: 0.875

ttagtgctcttagctaccttctta	CRISPR spacer
atcgtgctcttagctaccttccta	Protospacer
 * ******************.**

55. spacer 4.4|1799885|24|LS991409|CRT matches to NZ_CP024212 (Borrelia miyamotoi strain Izh-5 plasmid pIzh5-5) position: , mismatch: 3, identity: 0.875

ttagtgctcttagctaccttctta	CRISPR spacer
atcgtgctcttagctaccttccta	Protospacer
 * ******************.**

56. spacer 4.4|1799885|24|LS991409|CRT matches to NZ_CP024354 (Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp41-1, complete sequence) position: , mismatch: 3, identity: 0.875

ttagtgctcttagctaccttctta	CRISPR spacer
atcgtgctcttagctaccttccta	Protospacer
 * ******************.**

57. spacer 4.4|1799885|24|LS991409|CRT matches to NZ_CP024359 (Borrelia miyamotoi strain Izh-16 plasmid pIzh16-5) position: , mismatch: 3, identity: 0.875

ttagtgctcttagctaccttctta	CRISPR spacer
atcgtgctcttagctaccttccta	Protospacer
 * ******************.**

58. spacer 2.13|818847|33|LS991409|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031108 (Escherichia coli strain AMSCJX02 plasmid pAMSC3, complete sequence) position: , mismatch: 4, identity: 0.879

ccgtgttgattaacggggaaccgtggtttgttg	CRISPR spacer
tagtgatgattaacggcgaaccgtggtttgttg	Protospacer
. *** ********** ****************

59. spacer 2.13|818847|33|LS991409|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031108 (Escherichia coli strain AMSCJX02 plasmid pAMSC3, complete sequence) position: , mismatch: 4, identity: 0.879

ccgtgttgattaacggggaaccgtggtttgttg	CRISPR spacer
tagtgatgattaacggcgaaccgtggtttgttg	Protospacer
. *** ********** ****************

60. spacer 2.41|820552|33|LS991409|CRISPRCasFinder,CRT matches to MH616963 (CrAssphage sp. isolate ctbg_1, complete genome) position: , mismatch: 5, identity: 0.848

ttaaattaaaagaggtgttaaaaatg--actattc	CRISPR spacer
taaaattaagagaggtcttaaaaatggtactat--	Protospacer
* *******.****** *********  *****  

61. spacer 2.75|820571|33|LS991409|PILER-CR matches to MH616963 (CrAssphage sp. isolate ctbg_1, complete genome) position: , mismatch: 5, identity: 0.848

ttaaattaaaagaggtgttaaaaatg--actattc	CRISPR spacer
taaaattaagagaggtcttaaaaatggtactat--	Protospacer
* *******.****** *********  *****  

62. spacer 2.27|819699|32|LS991409|CRISPRCasFinder,CRT matches to MT932211 (Escherichia phage VEcB, complete genome) position: , mismatch: 6, identity: 0.812

tgttgtcattggtgacattgctga---ggaatgga	CRISPR spacer
tgttgtgattagtgacattgctgattttgaat---	Protospacer
****** ***.*************    ****   

63. spacer 2.27|819699|32|LS991409|CRISPRCasFinder,CRT matches to MN850573 (Escherichia phage muut, complete genome) position: , mismatch: 6, identity: 0.812

tgttgtcattggtgacattgctga---ggaatgga	CRISPR spacer
tgttgtgattagtgacattgctgattttgaat---	Protospacer
****** ***.*************    ****   

64. spacer 2.27|819699|32|LS991409|CRISPRCasFinder,CRT matches to MN850601 (Escherichia phage inny, complete genome) position: , mismatch: 6, identity: 0.812

tgttgtcattggtgacattgctga---ggaatgga	CRISPR spacer
tgttgtgattagtgacattgctgattttgaat---	Protospacer
****** ***.*************    ****   

65. spacer 2.27|819699|32|LS991409|CRISPRCasFinder,CRT matches to MN850584 (Escherichia phage arall, complete genome) position: , mismatch: 6, identity: 0.812

tgttgtcattggtgacattgctga---ggaatgga	CRISPR spacer
tgttgtgattagtgacattgctgattttgaat---	Protospacer
****** ***.*************    ****   

66. spacer 2.61|819712|32|LS991409|PILER-CR matches to MT932211 (Escherichia phage VEcB, complete genome) position: , mismatch: 6, identity: 0.812

tgttgtcattggtgacattgctga---ggaatgga	CRISPR spacer
tgttgtgattagtgacattgctgattttgaat---	Protospacer
****** ***.*************    ****   

67. spacer 2.61|819712|32|LS991409|PILER-CR matches to MN850573 (Escherichia phage muut, complete genome) position: , mismatch: 6, identity: 0.812

tgttgtcattggtgacattgctga---ggaatgga	CRISPR spacer
tgttgtgattagtgacattgctgattttgaat---	Protospacer
****** ***.*************    ****   

68. spacer 2.61|819712|32|LS991409|PILER-CR matches to MN850601 (Escherichia phage inny, complete genome) position: , mismatch: 6, identity: 0.812

tgttgtcattggtgacattgctga---ggaatgga	CRISPR spacer
tgttgtgattagtgacattgctgattttgaat---	Protospacer
****** ***.*************    ****   

69. spacer 2.61|819712|32|LS991409|PILER-CR matches to MN850584 (Escherichia phage arall, complete genome) position: , mismatch: 6, identity: 0.812

tgttgtcattggtgacattgctga---ggaatgga	CRISPR spacer
tgttgtgattagtgacattgctgattttgaat---	Protospacer
****** ***.*************    ****   

70. spacer 4.5|1799927|30|LS991409|CRT matches to MK757446 (Mycobacterium phage Candle, complete genome) position: , mismatch: 6, identity: 0.8

tttgcagccttcttggttgccttctttgca	CRISPR spacer
tttgcagccttcttgctggccttcactggc	Protospacer
*************** * ****** .**  

71. spacer 4.5|1799927|30|LS991409|CRT matches to KY969628 (Mycobacterium phage Zenon, complete genome) position: , mismatch: 6, identity: 0.8

tttgcagccttcttggttgccttctttgca	CRISPR spacer
tttgcagccttcttgctggccttcactggc	Protospacer
*************** * ****** .**  

72. spacer 4.5|1799927|30|LS991409|CRT matches to MH001447 (Mycobacterium phage Nilo, complete genome) position: , mismatch: 6, identity: 0.8

tttgcagccttcttggttgccttctttgca	CRISPR spacer
tttgcagccttcttgctggccttcactggc	Protospacer
*************** * ****** .**  

73. spacer 4.5|1799927|30|LS991409|CRT matches to JF704112 (Mycobacterium phage Send513, complete sequence) position: , mismatch: 6, identity: 0.8

tttgcagccttcttggttgccttctttgca	CRISPR spacer
tttgcagccttcttgctggccttcactggc	Protospacer
*************** * ****** .**  

74. spacer 4.5|1799927|30|LS991409|CRT matches to NC_022053 (Mycobacterium phage Papyrus, complete genome) position: , mismatch: 6, identity: 0.8

tttgcagccttcttggttgccttctttgca	CRISPR spacer
tttgcagccttcttgctggccttcactggc	Protospacer
*************** * ****** .**  

75. spacer 4.5|1799927|30|LS991409|CRT matches to KT591076 (Mycobacterium phage Weiss13, complete genome) position: , mismatch: 6, identity: 0.8

tttgcagccttcttggttgccttctttgca	CRISPR spacer
tttgcagccttcttgctggccttcactggc	Protospacer
*************** * ****** .**  

76. spacer 2.21|819335|32|LS991409|CRISPRCasFinder,CRT matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.781

ttctggtttggcgtcactatctccgacatcga	CRISPR spacer
gtccgctacggcgtcaccgtctccgacatcga	Protospacer
 **.* * .********..*************

77. spacer 2.21|819335|32|LS991409|CRISPRCasFinder,CRT matches to NZ_CP016500 (Agrobacterium sp. RAC06 plasmid pBSY240_1, complete sequence) position: , mismatch: 7, identity: 0.781

ttctggtt--tggcgtcactatctccgacatcga	CRISPR spacer
--caggctgccggcgtcaccatctccgatatcga	Protospacer
  * **.*  .********.********.*****

78. spacer 2.21|819335|32|LS991409|CRISPRCasFinder,CRT matches to NZ_CP045856 (Agrobacterium sp. MA01 plasmid punanmed2, complete sequence) position: , mismatch: 7, identity: 0.781

ttctggtt--tggcgtcactatctccgacatcga	CRISPR spacer
--caggctgccggcgtcaccatctccgatatcga	Protospacer
  * **.*  .********.********.*****

79. spacer 2.26|819639|32|LS991409|CRISPRCasFinder,CRT matches to MK809530 (Salmonella phage vB_SenS_SB6, complete genome) position: , mismatch: 7, identity: 0.781

atggtgctcgtccaagtaacccaggtaggcga	CRISPR spacer
caggtgctcgtccatttaacccaggtaaacaa	Protospacer
  ************  ***********..*.*

80. spacer 2.26|819639|32|LS991409|CRISPRCasFinder,CRT matches to MF431738 (Bacteriophage T5-like poul149, complete genome) position: , mismatch: 7, identity: 0.781

atggtgctcgtccaagtaacccaggtaggcga	CRISPR spacer
caggtgctcgtccatttaacccaggtaaacaa	Protospacer
  ************  ***********..*.*

81. spacer 2.26|819639|32|LS991409|CRISPRCasFinder,CRT matches to MG065642 (UNVERIFIED: Campylobacter phage A148, complete genome) position: , mismatch: 7, identity: 0.781

atggtgctcgtccaagtaacccaggtaggcga	CRISPR spacer
caggtgctcgtccatttaacccaggtaaacaa	Protospacer
  ************  ***********..*.*

82. spacer 2.26|819639|32|LS991409|CRISPRCasFinder,CRT matches to MF431736 (Bacteriophage T5-like chee130_1, complete genome) position: , mismatch: 7, identity: 0.781

atggtgctcgtccaagtaacccaggtaggcga	CRISPR spacer
caggtgctcgtccatttaacccaggtaaacaa	Protospacer
  ************  ***********..*.*

83. spacer 2.26|819639|32|LS991409|CRISPRCasFinder,CRT matches to MT653145 (Salmonella phage 8sent65, complete genome) position: , mismatch: 7, identity: 0.781

atggtgctcgtccaagtaacccaggtaggcga	CRISPR spacer
caggtgctcgtccatttaacccaggtaaacaa	Protospacer
  ************  ***********..*.*

84. spacer 2.26|819639|32|LS991409|CRISPRCasFinder,CRT matches to MF431737 (Bacteriophage T5-like saus132, complete genome) position: , mismatch: 7, identity: 0.781

atggtgctcgtccaagtaacccaggtaggcga	CRISPR spacer
caggtgctcgtccatttaacccaggtaaacaa	Protospacer
  ************  ***********..*.*

85. spacer 2.26|819639|32|LS991409|CRISPRCasFinder,CRT matches to MF431739 (Bacteriophage T5-like chee158, complete genome) position: , mismatch: 7, identity: 0.781

atggtgctcgtccaagtaacccaggtaggcga	CRISPR spacer
caggtgctcgtccatttaacccaggtaaacaa	Protospacer
  ************  ***********..*.*

86. spacer 2.26|819639|32|LS991409|CRISPRCasFinder,CRT matches to MF431740 (Bacteriophage T5-like cott162, complete genome) position: , mismatch: 7, identity: 0.781

atggtgctcgtccaagtaacccaggtaggcga	CRISPR spacer
caggtgctcgtccatttaacccaggtaaacaa	Protospacer
  ************  ***********..*.*

87. spacer 2.26|819639|32|LS991409|CRISPRCasFinder,CRT matches to MF431741 (Bacteriophage T5-like saus176N, complete genome) position: , mismatch: 7, identity: 0.781

atggtgctcgtccaagtaacccaggtaggcga	CRISPR spacer
caggtgctcgtccatttaacccaggtaaacaa	Protospacer
  ************  ***********..*.*

88. spacer 2.26|819639|32|LS991409|CRISPRCasFinder,CRT matches to NC_048866 (Salmonella phage bombadil, complete genome) position: , mismatch: 7, identity: 0.781

atggtgctcgtccaagtaacccaggtaggcga	CRISPR spacer
caggtgctcgtccatttaacccaggtaaacaa	Protospacer
  ************  ***********..*.*

89. spacer 4.8|1800047|30|LS991409|CRT matches to KX077891 (Streptococcus phage phiJH1301-1, complete genome) position: , mismatch: 7, identity: 0.767

tttgcagccttcttagctgacttcttggca	CRISPR spacer
tttgctgccttcttagctgatttagcagta	Protospacer
***** **************.**  ..*.*

90. spacer 4.8|1800047|30|LS991409|CRT matches to NZ_CP026273 (Klebsiella oxytoca strain KONIH4 plasmid pKOX-ea2b, complete sequence) position: , mismatch: 7, identity: 0.767

tttgcagccttcttagctgacttcttggca	CRISPR spacer
cttgcagccttcttaggtgactcgtcatca	Protospacer
.*************** *****. *.. **

91. spacer 2.8|818541|33|LS991409|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594673 (Variovorax sp. PBL-E5 plasmid 3) position: , mismatch: 8, identity: 0.758

tcatcaagtgcgccgccatcaaagcccttcgtg	CRISPR spacer
tcatcaagagcgccggcatcaaagccgactgat	Protospacer
******** ****** **********  ..*  

92. spacer 2.41|820552|33|LS991409|CRISPRCasFinder,CRT matches to NZ_CP031270 (Staphylococcus warneri strain 16A plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

ttaaattaaaagaggtgttaaaaatgactattc	CRISPR spacer
ataaataaaaagaggtgataaaaatgaacttaa	Protospacer
 ***** ********** ********* . *  

93. spacer 2.41|820552|33|LS991409|CRISPRCasFinder,CRT matches to NZ_CP031270 (Staphylococcus warneri strain 16A plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

ttaaattaaaagaggtgttaaaaatgactattc	CRISPR spacer
ataaataaaaagaggtgataaaaatgaacttaa	Protospacer
 ***** ********** ********* . *  

94. spacer 2.46|820855|33|LS991409|CRISPRCasFinder,CRT matches to MK931297 (Escherichia phage vB_EcoP_3HA13, complete genome) position: , mismatch: 8, identity: 0.758

----tagtctataggggatccccggctttttggataa	CRISPR spacer
aacagagcc----ggggatacccggctttttcgataa	Protospacer
     **.*    ****** *********** *****

95. spacer 2.46|820855|33|LS991409|CRISPRCasFinder,CRT matches to MH992123 (UNVERIFIED: Escherichia phage OLB145, complete genome) position: , mismatch: 8, identity: 0.758

----tagtctataggggatccccggctttttggataa	CRISPR spacer
aacagagcc----ggggatacccggctttttcgataa	Protospacer
     **.*    ****** *********** *****

96. spacer 2.52|821221|33|LS991409|CRISPRCasFinder,CRT matches to AP013386 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C23-MedDCM-OCT-S37-C51) position: , mismatch: 8, identity: 0.758

ttaaagggggaaatcatgagatataagcgaaaa	CRISPR spacer
taaaagggggaaataatgatatataaaatatta	Protospacer
* ************ **** ******.  *  *

97. spacer 2.54|818364|32|LS991409|PILER-CR matches to NC_007968 (Psychrobacter cryohalolentis K5 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.75

gtggatacccctattaacaaaaaagacgaggg	CRISPR spacer
gctaacgcccctattaataaaaaagatgagtg	Protospacer
*. .*..**********.********.*** *

98. spacer 2.54|818364|32|LS991409|PILER-CR matches to NZ_CP022042 (Psychrobacter cryohalolentis strain FDAARGOS_308 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gtggatacccctattaacaaaaaagacgaggg	CRISPR spacer
gctaacgcccctattaataaaaaagatgagtg	Protospacer
*. .*..**********.********.*** *

99. spacer 2.54|818364|32|LS991409|PILER-CR matches to MF417908 (Uncultured Caudovirales phage clone 10S_1, partial genome) position: , mismatch: 8, identity: 0.75

gtggatacccctattaacaaaaaagacgaggg	CRISPR spacer
gttgatacccctattaacacaaatgttaaaga	Protospacer
** **************** *** * ..*.*.

100. spacer 2.75|820571|33|LS991409|PILER-CR matches to NZ_CP031270 (Staphylococcus warneri strain 16A plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

ttaaattaaaagaggtgttaaaaatgactattc	CRISPR spacer
ataaataaaaagaggtgataaaaatgaacttaa	Protospacer
 ***** ********** ********* . *  

101. spacer 2.75|820571|33|LS991409|PILER-CR matches to NZ_CP031270 (Staphylococcus warneri strain 16A plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

ttaaattaaaagaggtgttaaaaatgactattc	CRISPR spacer
ataaataaaaagaggtgataaaaatgaacttaa	Protospacer
 ***** ********** ********* . *  

102. spacer 2.80|820886|33|LS991409|PILER-CR matches to MK931297 (Escherichia phage vB_EcoP_3HA13, complete genome) position: , mismatch: 8, identity: 0.758

----tagtctataggggatccccggctttttggataa	CRISPR spacer
aacagagcc----ggggatacccggctttttcgataa	Protospacer
     **.*    ****** *********** *****

103. spacer 2.80|820886|33|LS991409|PILER-CR matches to MH992123 (UNVERIFIED: Escherichia phage OLB145, complete genome) position: , mismatch: 8, identity: 0.758

----tagtctataggggatccccggctttttggataa	CRISPR spacer
aacagagcc----ggggatacccggctttttcgataa	Protospacer
     **.*    ****** *********** *****

104. spacer 4.5|1799927|30|LS991409|CRT matches to NC_048139 (Streptomyces phage Hiyaa, complete genome) position: , mismatch: 8, identity: 0.733

tttgcagccttcttggttgccttctttgca	CRISPR spacer
gccgcagccttcttggctgccttccgtcct	Protospacer
 ..*************.*******. * * 

105. spacer 4.5|1799927|30|LS991409|CRT matches to LR743524 (Xylella phage Bacata genome assembly, chromosome: 1) position: , mismatch: 8, identity: 0.733

tttgcagccttcttggttgccttctttgca	CRISPR spacer
ggagtggccttcttggtggccttcttggcg	Protospacer
   *..*********** ******** **.

106. spacer 2.5|818356|34|LS991409|CRISPRCasFinder,CRT matches to MF417908 (Uncultured Caudovirales phage clone 10S_1, partial genome) position: , mismatch: 9, identity: 0.735

ttgtggatacccctattaacaaaaaagacgaggg	CRISPR spacer
ctgttgatacccctattaacacaaatgttaaaga	Protospacer
.*** **************** *** * ..*.*.

107. spacer 2.8|818541|33|LS991409|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012477 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

tcatcaagtgcgccgccatcaaagcccttcgtg	CRISPR spacer
ttcgccagtgcgacgccatcaatgcccttctgc	Protospacer
*.  * ****** ********* *******   

108. spacer 2.13|818847|33|LS991409|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 9, identity: 0.727

ccgtgttgattaacggggaaccgtggtttgttg	CRISPR spacer
agctgttgattaccgtggaaccgtggtcttggg	Protospacer
   ********* ** ***********.*   *

109. spacer 2.21|819335|32|LS991409|CRISPRCasFinder,CRT matches to MT270409 (Phaeobacter phage MD18, complete genome) position: , mismatch: 9, identity: 0.719

ttctggtttggcgtcactatctccgacatcga	CRISPR spacer
ttggcctttggagacactatctccgacattac	Protospacer
**    ***** * ***************.. 

110. spacer 2.26|819639|32|LS991409|CRISPRCasFinder,CRT matches to LR597659 (Escherichia phage T5_ev212 genome assembly, chromosome: 1) position: , mismatch: 9, identity: 0.719

atggtgctcgtccaagtaacccaggtaggcga	CRISPR spacer
caggtgctcgtccatttaacccaggcaaacag	Protospacer
  ************  *********.*..*..

111. spacer 2.26|819639|32|LS991409|CRISPRCasFinder,CRT matches to MT311645 (Salmonella phage vB_Sen-E22, complete genome) position: , mismatch: 9, identity: 0.719

atggtgctcgtccaagtaacccaggtaggcga	CRISPR spacer
cgggtgctcgtccatttaacccaggcaaacag	Protospacer
  ************  *********.*..*..

112. spacer 2.26|819639|32|LS991409|CRISPRCasFinder,CRT matches to MT074463 (Salmonella phage gmork, complete genome) position: , mismatch: 9, identity: 0.719

atggtgctcgtccaagtaacccaggtaggcga	CRISPR spacer
caggtgctcgtccatttaacccaggcaaacag	Protospacer
  ************  *********.*..*..

113. spacer 2.26|819639|32|LS991409|CRISPRCasFinder,CRT matches to MK770410 (Salmonella phage SE3, complete genome) position: , mismatch: 9, identity: 0.719

atggtgctcgtccaagtaacccaggtaggcga	CRISPR spacer
caggtgctcgtccatttaacccaggcaaacag	Protospacer
  ************  *********.*..*..

114. spacer 2.26|819639|32|LS991409|CRISPRCasFinder,CRT matches to MK972708 (Salmonella phage SE7, complete genome) position: , mismatch: 9, identity: 0.719

atggtgctcgtccaagtaacccaggtaggcga	CRISPR spacer
caggtgctcgtccatttaacccaggcaaacag	Protospacer
  ************  *********.*..*..

115. spacer 2.26|819639|32|LS991409|CRISPRCasFinder,CRT matches to NC_048010 (Salmonella phage S132, complete genome) position: , mismatch: 9, identity: 0.719

atggtgctcgtccaagtaacccaggtaggcga	CRISPR spacer
caggtgctcgtccatttaacccaggcaaacag	Protospacer
  ************  *********.*..*..

116. spacer 2.26|819639|32|LS991409|CRISPRCasFinder,CRT matches to MK005300 (Salmonella phage STG2, complete genome) position: , mismatch: 9, identity: 0.719

atggtgctcgtccaagtaacccaggtaggcga	CRISPR spacer
caggtgctcgtccatttaacccaggcaaacag	Protospacer
  ************  *********.*..*..

117. spacer 2.28|819759|33|LS991409|CRISPRCasFinder,CRT matches to CP031732 (Stenotrophomonas rhizophila strain GA1 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.727

tcaatgcagagcaggctgagacgttcgacaagg	CRISPR spacer
acccagtcgagcaggctgcgacgttcgaccaga	Protospacer
 *   *. ********** ********** **.

118. spacer 2.28|819759|33|LS991409|CRISPRCasFinder,CRT matches to NZ_CP029094 (Pseudomonas aeruginosa strain AR441 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.727

tcaatgcagagcaggctgagacgttcgacaagg	CRISPR spacer
acccagtcgagcaggctgcgacgttcgaccaga	Protospacer
 *   *. ********** ********** **.

119. spacer 2.28|819759|33|LS991409|CRISPRCasFinder,CRT matches to NZ_CP027170 (Pseudomonas aeruginosa strain AR_0356 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

tcaatgcagagcaggctgagacgttcgacaagg	CRISPR spacer
acccagtcgagcaggctgcgacgttcgaccaga	Protospacer
 *   *. ********** ********** **.

120. spacer 2.40|820491|33|LS991409|CRISPRCasFinder,CRT matches to NZ_CP032268 (Acinetobacter sp. WCHAc010034 plasmid p1_010034, complete sequence) position: , mismatch: 9, identity: 0.727

cgatcagaccaaagcgactctaaagcgaatcaa	CRISPR spacer
aagccaagacaaaaagactctaaagcgaatcaa	Protospacer
 ...**.. ****. ******************

121. spacer 2.41|820552|33|LS991409|CRISPRCasFinder,CRT matches to MG744354 (Lactobacillus phage Satyr, complete genome) position: , mismatch: 9, identity: 0.727

ttaaattaaaagaggtgttaaaaatgactattc	CRISPR spacer
ataaattaaaggaggtgataaaaatggtttacg	Protospacer
 *********.****** ********..*  . 

122. spacer 2.51|821160|33|LS991409|CRISPRCasFinder,CRT matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 9, identity: 0.727

ccaggcggaaccggtcggcacaccgttcgtgca	CRISPR spacer
cggagcgcatccggtcggcacaccgttcttaag	Protospacer
* ..*** * ****************** *. .

123. spacer 2.51|821160|33|LS991409|CRISPRCasFinder,CRT matches to NZ_CP039426 (Citricoccus sp. SGAir0253 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

ccaggcggaaccggtcggcacaccgttcgtgca	CRISPR spacer
aggaactgaaccggtcgggacaccggtcgtgga	Protospacer
  ...* *********** ****** ***** *

124. spacer 2.51|821160|33|LS991409|CRISPRCasFinder,CRT matches to NZ_CP039431 (Citricoccus sp. SGAir0453 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

ccaggcggaaccggtcggcacaccgttcgtgca	CRISPR spacer
aggaactgaaccggtcgggacaccggtcgtgga	Protospacer
  ...* *********** ****** ***** *

125. spacer 2.62|819772|33|LS991409|PILER-CR matches to CP031732 (Stenotrophomonas rhizophila strain GA1 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.727

tcaatgcagagcaggctgagacgttcgacaagg	CRISPR spacer
acccagtcgagcaggctgcgacgttcgaccaga	Protospacer
 *   *. ********** ********** **.

126. spacer 2.62|819772|33|LS991409|PILER-CR matches to NZ_CP029094 (Pseudomonas aeruginosa strain AR441 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.727

tcaatgcagagcaggctgagacgttcgacaagg	CRISPR spacer
acccagtcgagcaggctgcgacgttcgaccaga	Protospacer
 *   *. ********** ********** **.

127. spacer 2.62|819772|33|LS991409|PILER-CR matches to NZ_CP027170 (Pseudomonas aeruginosa strain AR_0356 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

tcaatgcagagcaggctgagacgttcgacaagg	CRISPR spacer
acccagtcgagcaggctgcgacgttcgaccaga	Protospacer
 *   *. ********** ********** **.

128. spacer 2.74|820510|33|LS991409|PILER-CR matches to NZ_CP032268 (Acinetobacter sp. WCHAc010034 plasmid p1_010034, complete sequence) position: , mismatch: 9, identity: 0.727

cgatcagaccaaagcgactctaaagcgaatcaa	CRISPR spacer
aagccaagacaaaaagactctaaagcgaatcaa	Protospacer
 ...**.. ****. ******************

129. spacer 2.75|820571|33|LS991409|PILER-CR matches to MG744354 (Lactobacillus phage Satyr, complete genome) position: , mismatch: 9, identity: 0.727

ttaaattaaaagaggtgttaaaaatgactattc	CRISPR spacer
ataaattaaaggaggtgataaaaatggtttacg	Protospacer
 *********.****** ********..*  . 

130. spacer 2.85|821191|33|LS991409|PILER-CR matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 9, identity: 0.727

ccaggcggaaccggtcggcacaccgttcgtgca	CRISPR spacer
cggagcgcatccggtcggcacaccgttcttaag	Protospacer
* ..*** * ****************** *. .

131. spacer 2.85|821191|33|LS991409|PILER-CR matches to NZ_CP039426 (Citricoccus sp. SGAir0253 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

ccaggcggaaccggtcggcacaccgttcgtgca	CRISPR spacer
aggaactgaaccggtcgggacaccggtcgtgga	Protospacer
  ...* *********** ****** ***** *

132. spacer 2.85|821191|33|LS991409|PILER-CR matches to NZ_CP039431 (Citricoccus sp. SGAir0453 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

ccaggcggaaccggtcggcacaccgttcgtgca	CRISPR spacer
aggaactgaaccggtcgggacaccggtcgtgga	Protospacer
  ...* *********** ****** ***** *

133. spacer 4.5|1799927|30|LS991409|CRT matches to MH622920 (Podoviridae sp. isolate ctda_1, complete genome) position: , mismatch: 9, identity: 0.7

tttgcagccttcttggttgccttctttgca	CRISPR spacer
gcagcggtcttcttggttgccttcttgctg	Protospacer
 . **.*.******************  ..

134. spacer 4.5|1799927|30|LS991409|CRT matches to NZ_LR134469 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 27, complete sequence) position: , mismatch: 9, identity: 0.7

tttgcagccttcttggttgccttctttgca	CRISPR spacer
gccgccgccttcttggtggccttcttcttc	Protospacer
 ..** *********** ********. . 

135. spacer 2.8|818541|33|LS991409|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 10, identity: 0.697

tcatcaagtgcgccgccatcaaagcccttcgtg	CRISPR spacer
cccgcaagggcgccgccatcaaggccctcgccc	Protospacer
.*  **** *************.*****.  . 

136. spacer 4.5|1799927|30|LS991409|CRT matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 10, identity: 0.667

tttgcagccttcttggttgccttctttgca	CRISPR spacer
gacattgccttgttggttgccttctttcgc	Protospacer
  ... ***** ***************   

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 267954 : 283295 14 Planktothrix_phage(20.0%) NA NA
DBSCAN-SWA_2 1167283 : 1177678 9 Erwinia_phage(16.67%) tRNA,protease NA
DBSCAN-SWA_3 1324359 : 1332930 8 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_4 1837143 : 1845919 11 Clostridioides_phage(22.22%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage