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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LS398552 Orientia tsutsugamushi isolate UT76 genome assembly, chromosome: I 0 crisprs RT,DEDDh 0 0 27 0

Results visualization

1. LS398552
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 8500 : 51197 52 Tupanvirus(23.08%) integrase,transposase NA
DBSCAN-SWA_2 60317 : 84410 35 Shearwaterpox_virus(33.33%) integrase,transposase attL 51895:51911|attR 78005:78021
DBSCAN-SWA_3 98799 : 150661 48 Streptococcus_phage(22.22%) protease,tRNA,integrase,transposase attL 127682:127703|attR 134797:134818
DBSCAN-SWA_4 157050 : 201097 43 Streptococcus_phage(28.57%) integrase,transposase attL 160495:160518|attR 205778:205801
DBSCAN-SWA_5 215499 : 271701 48 Wolbachia_phage(33.33%) integrase,transposase attL 226851:226879|attR 258989:259017
DBSCAN-SWA_6 282693 : 414285 166 Pseudomonas_phage(12.5%) tRNA,integrase,transposase attL 282256:282279|attR 412517:412537
DBSCAN-SWA_7 425556 : 487992 53 Indivirus(15.38%) protease,tRNA,terminase,transposase NA
DBSCAN-SWA_8 499163 : 594749 113 Streptococcus_phage(16.67%) integrase,transposase attL 508198:508222|attR 539125:539149
DBSCAN-SWA_9 603407 : 646102 52 Wolbachia_phage(16.67%) integrase,transposase attL 602264:602285|attR 637750:637771
DBSCAN-SWA_10 659921 : 692545 37 Pseudomonas_phage(20.0%) tRNA,integrase,transposase attL 658367:658382|attR 690121:690136
DBSCAN-SWA_11 760892 : 825195 75 Bacillus_phage(20.0%) tRNA,integrase,transposase attL 760730:760773|attR 809277:810269
DBSCAN-SWA_12 840751 : 883845 39 Bodo_saltans_virus(16.67%) transposase NA
DBSCAN-SWA_13 899143 : 1022649 120 Tupanvirus(16.67%) tRNA,integrase,transposase attL 899018:899039|attR 946619:946640
DBSCAN-SWA_14 1043513 : 1066124 30 Bacillus_phage(20.0%) tRNA,integrase,transposase attL 1044834:1044849|attR 1053635:1053650
DBSCAN-SWA_15 1079285 : 1108701 26 Hokovirus(25.0%) integrase,transposase attL 1075688:1075705|attR 1113822:1113839
DBSCAN-SWA_16 1131943 : 1228876 106 Salmonella_phage(10.0%) integrase,transposase attL 1150444:1150471|attR 1197655:1197670
DBSCAN-SWA_17 1234759 : 1286784 48 Tetraselmis_virus(20.0%) tRNA,integrase,transposase attL 1257015:1257034|attR 1264949:1264968
DBSCAN-SWA_18 1404844 : 1457754 50 Xenohaliotis_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_19 1464725 : 1519578 58 uncultured_Mediterranean_phage(21.43%) protease,tRNA,integrase,transposase attL 1460437:1460470|attR 1491979:1492012
DBSCAN-SWA_20 1525363 : 1567013 52 Cafeteria_roenbergensis_virus(16.67%) tRNA,integrase,transposase attL 1542283:1542305|attR 1574132:1574154
DBSCAN-SWA_21 1576423 : 1625532 57 Streptococcus_phage(22.22%) integrase,transposase attL 1568573:1568589|attR 1601372:1601388
DBSCAN-SWA_22 1629598 : 1726365 103 Tupanvirus(13.33%) tRNA,integrase,transposase attL 1625328:1625343|attR 1642247:1642262
DBSCAN-SWA_23 1741316 : 1788196 51 Pseudomonas_virus(11.11%) protease,tRNA,integrase,transposase attL 1767743:1767763|attR 1781873:1781893
DBSCAN-SWA_24 1807659 : 1844834 36 Acinetobacter_phage(10.0%) tRNA,integrase,transposase attL 1822684:1822699|attR 1847669:1847684
DBSCAN-SWA_25 1862849 : 1893065 31 Streptococcus_phage(28.57%) integrase,transposase attL 1887304:1887323|attR 1893056:1893075
DBSCAN-SWA_26 1913806 : 1958572 51 Mycobacterium_virus(16.67%) tRNA,integrase,transposase attL 1937240:1937271|attR 1954258:1954289
DBSCAN-SWA_27 1975738 : 2020663 54 Xenohaliotis_phage(11.11%) tRNA,integrase,transposase attL 1984123:1984141|attR 2038874:2038892
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage