Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LS398588 Bordetella pertussis strain VS67 genome assembly, chromosome: I 5 crisprs csa3,cas3,DinG,DEDDh 0 0 25 0

Results visualization

1. LS398588
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LS398588_1 251639-251723 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LS398588_2 434132-434225 Orphan NA
1 spacers
DEDDh

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LS398588_3 1000551-1000645 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LS398588_4 1875704-1875831 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LS398588_5 3460328-3460437 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 59497 55 Natrialba_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_2 165941 : 226452 54 Planktothrix_phage(11.11%) transposase,tRNA,protease NA
DBSCAN-SWA_3 234384 : 287972 51 Bacillus_phage(22.22%) transposase,tRNA,protease NA
DBSCAN-SWA_4 355966 : 415435 58 Streptococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_5 637838 : 761345 123 uncultured_Caudovirales_phage(13.79%) terminase,transposase,tail,tRNA NA
DBSCAN-SWA_6 764364 : 830520 53 Streptococcus_phage(20.0%) transposase NA
DBSCAN-SWA_7 911580 : 961742 46 Bacillus_phage(25.0%) transposase NA
DBSCAN-SWA_8 1070650 : 1130698 50 uncultured_Mediterranean_phage(37.5%) transposase,tRNA,protease NA
DBSCAN-SWA_9 1138325 : 1203168 48 Bacillus_phage(40.0%) protease,tRNA,transposase NA
DBSCAN-SWA_10 1322142 : 1390629 59 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_11 1494351 : 1552595 55 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_12 1604106 : 1662252 53 Streptococcus_virus(11.11%) transposase NA
DBSCAN-SWA_13 1670524 : 1733321 51 Planktothrix_phage(11.11%) transposase NA
DBSCAN-SWA_14 1754112 : 1810427 57 uncultured_Caudovirales_phage(13.33%) transposase,tRNA NA
DBSCAN-SWA_15 1823928 : 1874297 45 Lake_Baikal_phage(18.18%) transposase,tRNA,protease NA
DBSCAN-SWA_16 1997720 : 2032177 35 Mycobacterium_phage(25.0%) transposase NA
DBSCAN-SWA_17 2715859 : 2756528 41 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_18 2817052 : 2887908 58 Moraxella_phage(12.5%) transposase NA
DBSCAN-SWA_19 2895933 : 2952719 44 uncultured_Mediterranean_phage(33.33%) transposase,protease NA
DBSCAN-SWA_20 2983105 : 3022294 39 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_21 3212293 : 3285065 60 Xanthomonas_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_22 3304764 : 3346978 39 Erwinia_phage(50.0%) transposase,protease NA
DBSCAN-SWA_23 3408881 : 3463671 51 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_24 3506455 : 3564374 55 Acinetobacter_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_25 4059549 : 4112981 47 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage