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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LS398549 Orientia tsutsugamushi isolate TA686 genome assembly, chromosome: I 0 crisprs DEDDh,RT 0 0 28 0

Results visualization

1. LS398549
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 8740 : 89505 109 Mannheimia_phage(15.38%) integrase,transposase NA
DBSCAN-SWA_2 92690 : 133399 49 Indivirus(50.0%) integrase,transposase attL 91715:91774|attR 105615:106590
DBSCAN-SWA_3 148623 : 198208 47 Wolbachia_phage(40.0%) integrase,transposase,tRNA attL 167574:167607|attR 190499:190532
DBSCAN-SWA_4 205602 : 316303 115 Bodo_saltans_virus(15.38%) integrase,transposase,tRNA attL 228520:228554|attR 291697:291720
DBSCAN-SWA_5 323247 : 359709 46 uncultured_Mediterranean_phage(100.0%) tRNA,transposase,terminase NA
DBSCAN-SWA_6 367988 : 415261 53 Streptococcus_phage(30.0%) transposase NA
DBSCAN-SWA_7 453481 : 539869 90 uncultured_Mediterranean_phage(16.67%) integrase,transposase,tRNA,capsid attL 474487:474528|attR 531029:531070
DBSCAN-SWA_8 551880 : 591486 47 Pseudomonas_phage(33.33%) integrase,transposase,tRNA attL 553444:553503|attR 591527:594704
DBSCAN-SWA_9 601741 : 631685 33 Wolbachia_phage(20.0%) transposase NA
DBSCAN-SWA_10 648833 : 698063 50 Pseudomonas_phage(20.0%) protease,transposase,tRNA NA
DBSCAN-SWA_11 703182 : 746703 57 Bacillus_phage(25.0%) integrase,transposase attL 697843:697876|attR 759823:759856
DBSCAN-SWA_12 759575 : 794512 31 Streptococcus_phage(33.33%) integrase,transposase attL 759571:759599|attR 777556:777584
DBSCAN-SWA_13 810848 : 842567 40 Pseudomonas_phage(20.0%) transposase NA
DBSCAN-SWA_14 871701 : 888173 22 Streptococcus_phage(33.33%) integrase,transposase,tRNA attL 886588:886603|attR 892085:892100
DBSCAN-SWA_15 905980 : 975939 101 Pseudomonas_phage(23.08%) integrase,transposase,tRNA attL 917301:917330|attR 968208:968244
DBSCAN-SWA_16 992375 : 1034928 55 Streptococcus_phage(50.0%) integrase,transposase,tRNA attL 997476:997517|attR 1016030:1016071
DBSCAN-SWA_17 1042300 : 1080978 49 Wolbachia_phage(42.86%) transposase NA
DBSCAN-SWA_18 1091922 : 1210910 117 Streptococcus_phage(21.43%) integrase,transposase,tRNA attL 1141266:1141282|attR 1209579:1209620
DBSCAN-SWA_19 1219874 : 1304906 103 Streptococcus_phage(30.0%) integrase,protease,transposase,tRNA attL 1224748:1224773|attR 1311114:1311413
DBSCAN-SWA_20 1314416 : 1423098 118 Wolbachia_phage(23.08%) integrase,transposase attL 1336445:1336469|attR 1427676:1427717
DBSCAN-SWA_21 1428333 : 1640472 237 Wolbachia_phage(12.5%) integrase,transposase,tRNA attL 1417643:1417679|attR 1620436:1620472
DBSCAN-SWA_22 1658111 : 1689063 41 Canarypox_virus(50.0%) protease,transposase NA
DBSCAN-SWA_23 1694730 : 1748506 58 Wolbachia_phage(16.67%) integrase,transposase,protease,tRNA attL 1735350:1735409|attR 1753664:1753811
DBSCAN-SWA_24 1751957 : 1797071 47 Pseudomonas_phage(20.0%) integrase,transposase,tRNA attL 1763669:1763728|attR 1778999:1779141
DBSCAN-SWA_25 1803757 : 1952528 169 Wolbachia_phage(20.0%) integrase,protease,transposase,tRNA attL 1849738:1849753|attR 1871421:1871436
DBSCAN-SWA_26 1966071 : 2006028 56 Bacillus_phage(33.33%) integrase,transposase attL 1967854:1967887|attR 1985858:1985891
DBSCAN-SWA_27 2126785 : 2158232 29 Streptococcus_phage(28.57%) integrase,transposase attL 2156502:2156517|attR 2164163:2164178
DBSCAN-SWA_28 2177887 : 2234482 57 Pneumococcus_phage(20.0%) integrase,transposase attL 2192812:2192871|attR 2215605:2215723
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage