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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LS483299 Mannheimia haemolytica strain NCTC10609 genome assembly, chromosome: 1 2 crisprs RT,cas3,PD-DExK,DEDDh,WYL,DinG,cas2,cas1,cas4,cas7,cas8c,cas5 1 8 8 0

Results visualization

1. LS483299
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LS483299_1 764494-764645 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LS483299_2 1994844-1996000 TypeI NA
17 spacers
cas2,cas1,cas4,cas7,cas8c,cas5

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
LS483299_2 2.17|1995935|34|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995935-1995968 34 LS483299.1 1969543-1969576 0 1.0

1. spacer 2.17|1995935|34|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to position: 1969543-1969576, mismatch: 0, identity: 1.0

agtttcaaggcagtttctatcgcttgtaagtcaa	CRISPR spacer
agtttcaaggcagtttctatcgcttgtaagtcaa	Protospacer
**********************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
LS483299_2 2.7|1995274|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995274-1995308 35 NC_028743 Mannheimia phage vB_MhS_587AP2, complete genome 18425-18459 0 1.0
LS483299_2 2.14|1995738|33|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995738-1995770 33 NC_028853 Mannheimia phage vB_MhS_535AP2, complete genome 16830-16862 0 1.0
LS483299_2 2.14|1995738|33|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995738-1995770 33 KP137439 Mannheimia phage vB_MhS_3927AP1, complete genome 16830-16862 0 1.0
LS483299_2 2.14|1995738|33|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995738-1995770 33 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 16992-17024 0 1.0
LS483299_2 2.14|1995738|33|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995738-1995770 33 NC_028743 Mannheimia phage vB_MhS_587AP2, complete genome 16817-16849 0 1.0
LS483299_2 2.15|1995803|34|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995803-1995836 34 NC_028743 Mannheimia phage vB_MhS_587AP2, complete genome 18494-18527 0 1.0
LS483299_2 2.16|1995869|34|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995869-1995902 34 NC_028853 Mannheimia phage vB_MhS_535AP2, complete genome 23300-23333 0 1.0
LS483299_2 2.16|1995869|34|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995869-1995902 34 KP137439 Mannheimia phage vB_MhS_3927AP1, complete genome 23300-23333 0 1.0
LS483299_2 2.16|1995869|34|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995869-1995902 34 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 23407-23440 0 1.0
LS483299_2 2.16|1995869|34|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995869-1995902 34 NC_028743 Mannheimia phage vB_MhS_587AP2, complete genome 22380-22413 0 1.0
LS483299_2 2.7|1995274|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995274-1995308 35 NC_028853 Mannheimia phage vB_MhS_535AP2, complete genome 18493-18527 2 0.943
LS483299_2 2.7|1995274|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995274-1995308 35 KP137439 Mannheimia phage vB_MhS_3927AP1, complete genome 18493-18527 2 0.943
LS483299_2 2.7|1995274|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995274-1995308 35 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 18600-18634 2 0.943
LS483299_2 2.15|1995803|34|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995803-1995836 34 NC_028853 Mannheimia phage vB_MhS_535AP2, complete genome 18562-18595 3 0.912
LS483299_2 2.15|1995803|34|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995803-1995836 34 KP137439 Mannheimia phage vB_MhS_3927AP1, complete genome 18562-18595 3 0.912
LS483299_2 2.15|1995803|34|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995803-1995836 34 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 18669-18702 3 0.912
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP022446 Bacillus cereus C1L plasmid pC1L1, complete sequence 305528-305562 6 0.829
LS483299_1 1.1|764519|27|LS483299|CRISPRCasFinder 764519-764545 27 NZ_CP024444 Moraxella osloensis strain NP7 plasmid pNP7-1, complete sequence 88793-88819 7 0.741
LS483299_1 1.1|764519|27|LS483299|CRISPRCasFinder 764519-764545 27 NZ_CP040258 Moraxella osloensis strain MOXF1 plasmid pMOXF1, complete sequence 106467-106493 7 0.741
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP011146 Bacillus cereus strain FORC_013 plasmid pFORC13, complete sequence 20980-21014 7 0.8
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP013038 Clostridium perfringens strain JP838 plasmid pJFP838E, complete sequence 8123-8157 7 0.8
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP019924 Borreliella burgdorferi strain PAbe plasmid p_lp36, complete sequence 12475-12509 7 0.8
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NC_018986 Borrelia burgdorferi 297 plasmid 297_lp36, complete sequence 9276-9310 7 0.8
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NC_017411 Borreliella burgdorferi JD1 plasmid JD1 lp36, complete sequence 9628-9662 7 0.8
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NC_015918 Borreliella bissettii DN127 plasmid lp28-7, complete sequence 17878-17912 7 0.8
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NC_011778 Borreliella burgdorferi ZS7 plasmid ZS7_lp36, complete sequence 12474-12508 7 0.8
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NC_001855 Borreliella burgdorferi B31 plasmid lp36, complete sequence 12475-12509 7 0.8
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP019852 Borreliella burgdorferi plasmid lp36, complete sequence 12343-12377 7 0.8
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP019763 Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp36, complete sequence 12409-12443 7 0.8
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP015808 Borrelia mayonii strain MN14-1539 plasmid lp36 17517-17551 7 0.8
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP017216 Borreliella burgdorferi strain B331 plasmid B331_lp36, complete sequence 10057-10091 7 0.8
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP015793 Borrelia mayonii strain MN14-1420 plasmid lp36, complete sequence 17517-17551 7 0.8
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NC_019358 Clostridium perfringens plasmid pCP8533S12 DNA, complete sequence 9440-9474 7 0.8
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_MK275624 Clostridium perfringens strain JXJA17 plasmid p6, complete sequence 7385-7419 7 0.8
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP013045 Clostridium perfringens strain JP55 plasmid pJFP55K, complete sequence 8006-8040 7 0.8
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 KP836355 Marinitoga camini virus 1, complete genome 4240-4274 7 0.8
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 AY082070 Bacteriophage phi3626, complete genome 30251-30285 8 0.771
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NC_003524 Clostridium phage phi3626, complete genome 30251-30285 8 0.771
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP040855 Lactobacillus johnsonii strain G2A plasmid unnamed1 71361-71395 8 0.771
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP040855 Lactobacillus johnsonii strain G2A plasmid unnamed1 71340-71374 8 0.771
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP013040 Clostridium perfringens strain JP838 plasmid pJFP838C, complete sequence 17585-17619 8 0.771
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_KT020842 Clostridium perfringens strain JP838 plasmid pJP838B, complete sequence 41383-41417 8 0.771
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NC_011412 Clostridium perfringens plasmid pCP8533etx, complete sequence 3532-3566 8 0.771
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NC_010937 Clostridium perfringens plasmid pCW3, complete sequence 26111-26145 8 0.771
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP009558 Clostridium perfringens strain FORC_003 plasmid pFORC3, complete sequence 38268-38302 8 0.771
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NC_019687 Clostridium perfringens plasmid pCpb2-CP1, complete sequence 15880-15914 8 0.771
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NC_019688 Clostridium perfringens plasmid pNetB-NE10, complete sequence 16446-16480 8 0.771
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NC_008014 Lawsonia intracellularis PHE/MN1-00 plasmid 3, complete sequence 174908-174942 8 0.771
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 LN835295 Clostridium perfringens plasmid pJIR4150, complete sequence, strain JIR12708 16932-16966 8 0.771
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NC_020130 Lawsonia intracellularis N343 plasmid 3, complete sequence 174930-174964 8 0.771
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP023413 Clostridium perfringens strain LLY_N11 plasmid pLLY_N11_3, complete sequence 2837-2871 8 0.771
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_AP017631 Clostridium perfringens strain CBA7123 plasmid pCBA7123-01, complete sequence 2838-2872 8 0.771
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NC_019257 Clostridium perfringens plasmid pJIR3844, complete sequence 16428-16462 8 0.771
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NC_019259 Clostridium perfringens plasmid pJIR3537, complete sequence 16817-16851 8 0.771
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NC_015712 Clostridium perfringens plasmid pCPPB-1, complete sequence 43188-43222 8 0.771
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 AP014503 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S42-C30, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces 17692-17726 8 0.771
LS483299_2 2.9|1995407|33|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995407-1995439 33 CP016281 Clostridium tyrobutyricum strain W428 plasmid pW428, complete sequence 55015-55047 9 0.727
LS483299_2 2.9|1995407|33|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995407-1995439 33 NZ_CP014171 Clostridium tyrobutyricum strain KCTC 5387 plasmid pCTK01, complete sequence 44553-44585 9 0.727
LS483299_2 2.10|1995472|33|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995472-1995504 33 CP016281 Clostridium tyrobutyricum strain W428 plasmid pW428, complete sequence 55015-55047 9 0.727
LS483299_2 2.10|1995472|33|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995472-1995504 33 NZ_CP014171 Clostridium tyrobutyricum strain KCTC 5387 plasmid pCTK01, complete sequence 44553-44585 9 0.727
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP022446 Bacillus cereus C1L plasmid pC1L1, complete sequence 305525-305559 9 0.743
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NC_009966 Fluoribacter dumoffii Tex-KL plasmid pLD-TEX-KL, complete sequence 65008-65042 9 0.743
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP053307 Spiroplasma citri strain C5 plasmid pScpC5-3, complete sequence 2943-2977 9 0.743
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP037428 Myroides odoratimimus strain G13 plasmid pFM-G13, complete sequence 21598-21632 9 0.743
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 JX569801 Campylobacter phage CP30A, complete genome 15952-15986 10 0.714
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NC_015679 Blattabacterium sp. (Blattella germanica) str. Bge plasmid pBge, complete sequence 1613-1647 10 0.714
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 MK448599 Streptococcus satellite phage Javan651, complete genome 3402-3436 10 0.714
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NC_007773 Clostridium perfringens plasmid pCPF5603, complete sequence 243-277 11 0.686
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP013039 Clostridium perfringens strain JP838 plasmid pJFP838D, complete sequence 48303-48337 12 0.657
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP025502 Clostridium perfringens strain EHE-NE18 plasmid pJIR3535, complete sequence 4995-5029 12 0.657
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP025503 Clostridium perfringens strain EHE-NE18 plasmid pJIR3844, complete sequence 11610-11644 12 0.657
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP025504 Clostridium perfringens strain EHE-NE18 plasmid pJIR3537, complete sequence 43646-43680 12 0.657
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 CP031285 Escherichia fergusonii strain 40A plasmid p46_40A, complete sequence 25766-25800 12 0.657
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 NZ_CP022502 Salmonella enterica subsp. enterica serovar Kentucky str. SA20030505 plasmid unnamed2, complete sequence 35202-35236 12 0.657
LS483299_2 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR 1995537-1995571 35 MN693472 Marine virus AFVG_25M86, complete genome 12077-12111 12 0.657

1. spacer 2.7|1995274|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_028743 (Mannheimia phage vB_MhS_587AP2, complete genome) position: , mismatch: 0, identity: 1.0

gcagttttaacttccgtgagccatacgttacaggt	CRISPR spacer
gcagttttaacttccgtgagccatacgttacaggt	Protospacer
***********************************

2. spacer 2.14|1995738|33|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_028853 (Mannheimia phage vB_MhS_535AP2, complete genome) position: , mismatch: 0, identity: 1.0

caggggctttccagatgaacgcaaacaaaaaga	CRISPR spacer
caggggctttccagatgaacgcaaacaaaaaga	Protospacer
*********************************

3. spacer 2.14|1995738|33|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to KP137439 (Mannheimia phage vB_MhS_3927AP1, complete genome) position: , mismatch: 0, identity: 1.0

caggggctttccagatgaacgcaaacaaaaaga	CRISPR spacer
caggggctttccagatgaacgcaaacaaaaaga	Protospacer
*********************************

4. spacer 2.14|1995738|33|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 0, identity: 1.0

caggggctttccagatgaacgcaaacaaaaaga	CRISPR spacer
caggggctttccagatgaacgcaaacaaaaaga	Protospacer
*********************************

5. spacer 2.14|1995738|33|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_028743 (Mannheimia phage vB_MhS_587AP2, complete genome) position: , mismatch: 0, identity: 1.0

caggggctttccagatgaacgcaaacaaaaaga	CRISPR spacer
caggggctttccagatgaacgcaaacaaaaaga	Protospacer
*********************************

6. spacer 2.15|1995803|34|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_028743 (Mannheimia phage vB_MhS_587AP2, complete genome) position: , mismatch: 0, identity: 1.0

atacttctgttccggtccaaatcggaatcgcacg	CRISPR spacer
atacttctgttccggtccaaatcggaatcgcacg	Protospacer
**********************************

7. spacer 2.16|1995869|34|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_028853 (Mannheimia phage vB_MhS_535AP2, complete genome) position: , mismatch: 0, identity: 1.0

caacacccgatttgtcaatagctccgtttggctg	CRISPR spacer
caacacccgatttgtcaatagctccgtttggctg	Protospacer
**********************************

8. spacer 2.16|1995869|34|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to KP137439 (Mannheimia phage vB_MhS_3927AP1, complete genome) position: , mismatch: 0, identity: 1.0

caacacccgatttgtcaatagctccgtttggctg	CRISPR spacer
caacacccgatttgtcaatagctccgtttggctg	Protospacer
**********************************

9. spacer 2.16|1995869|34|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 0, identity: 1.0

caacacccgatttgtcaatagctccgtttggctg	CRISPR spacer
caacacccgatttgtcaatagctccgtttggctg	Protospacer
**********************************

10. spacer 2.16|1995869|34|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_028743 (Mannheimia phage vB_MhS_587AP2, complete genome) position: , mismatch: 0, identity: 1.0

caacacccgatttgtcaatagctccgtttggctg	CRISPR spacer
caacacccgatttgtcaatagctccgtttggctg	Protospacer
**********************************

11. spacer 2.7|1995274|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_028853 (Mannheimia phage vB_MhS_535AP2, complete genome) position: , mismatch: 2, identity: 0.943

gcagttttaacttccgtgagccatacgttacaggt	CRISPR spacer
gcagttttaacttccgtgagccatacatcacaggt	Protospacer
**************************.*.******

12. spacer 2.7|1995274|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to KP137439 (Mannheimia phage vB_MhS_3927AP1, complete genome) position: , mismatch: 2, identity: 0.943

gcagttttaacttccgtgagccatacgttacaggt	CRISPR spacer
gcagttttaacttccgtgagccatacatcacaggt	Protospacer
**************************.*.******

13. spacer 2.7|1995274|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 2, identity: 0.943

gcagttttaacttccgtgagccatacgttacaggt	CRISPR spacer
gcagttttaacttccgtgagccatacatcacaggt	Protospacer
**************************.*.******

14. spacer 2.15|1995803|34|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_028853 (Mannheimia phage vB_MhS_535AP2, complete genome) position: , mismatch: 3, identity: 0.912

atacttctgttccggtccaaatcggaatcgcacg	CRISPR spacer
agacttccgtgccggtccaaatcggaatcgcacg	Protospacer
* *****.** ***********************

15. spacer 2.15|1995803|34|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to KP137439 (Mannheimia phage vB_MhS_3927AP1, complete genome) position: , mismatch: 3, identity: 0.912

atacttctgttccggtccaaatcggaatcgcacg	CRISPR spacer
agacttccgtgccggtccaaatcggaatcgcacg	Protospacer
* *****.** ***********************

16. spacer 2.15|1995803|34|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 3, identity: 0.912

atacttctgttccggtccaaatcggaatcgcacg	CRISPR spacer
agacttccgtgccggtccaaatcggaatcgcacg	Protospacer
* *****.** ***********************

17. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 6, identity: 0.829

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
ataaatattatatttttttaaaaaaattttatata	Protospacer
******** ***** ************ *  * **

18. spacer 1.1|764519|27|LS483299|CRISPRCasFinder matches to NZ_CP024444 (Moraxella osloensis strain NP7 plasmid pNP7-1, complete sequence) position: , mismatch: 7, identity: 0.741

aaataatttgacagctatttctagttt	CRISPR spacer
caataatttgacagctattttgacaaa	Protospacer
 *******************. *    

19. spacer 1.1|764519|27|LS483299|CRISPRCasFinder matches to NZ_CP040258 (Moraxella osloensis strain MOXF1 plasmid pMOXF1, complete sequence) position: , mismatch: 7, identity: 0.741

aaataatttgacagctatttctagttt	CRISPR spacer
caataatttgacagctattttgacaaa	Protospacer
 *******************. *    

20. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP011146 (Bacillus cereus strain FORC_013 plasmid pFORC13, complete sequence) position: , mismatch: 7, identity: 0.8

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
ttacatataatattattttaaacaaataaaatgtt	Protospacer
 ** ****************** ***** * * * 

21. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP013038 (Clostridium perfringens strain JP838 plasmid pJFP838E, complete sequence) position: , mismatch: 7, identity: 0.8

ataaatataatattattttaaaaaaatatatttta-	CRISPR spacer
cttaatataataatattttaaaaatata-ataatag	Protospacer
 * ********* *********** *** **  ** 

22. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP019924 (Borreliella burgdorferi strain PAbe plasmid p_lp36, complete sequence) position: , mismatch: 7, identity: 0.8

---ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
tctataaa---aattttattttaaaaaaagatatttat	Protospacer
   *****   *** ************** ******  

23. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_018986 (Borrelia burgdorferi 297 plasmid 297_lp36, complete sequence) position: , mismatch: 7, identity: 0.8

---ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
tctataaa---aattttattttaaaaaaagatatttat	Protospacer
   *****   *** ************** ******  

24. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_017411 (Borreliella burgdorferi JD1 plasmid JD1 lp36, complete sequence) position: , mismatch: 7, identity: 0.8

---ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
tctataaa---aattttattttaaaaaaagatatttat	Protospacer
   *****   *** ************** ******  

25. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_015918 (Borreliella bissettii DN127 plasmid lp28-7, complete sequence) position: , mismatch: 7, identity: 0.8

---ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
tctataaa---aattttattttaaaaaaagatatttat	Protospacer
   *****   *** ************** ******  

26. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_011778 (Borreliella burgdorferi ZS7 plasmid ZS7_lp36, complete sequence) position: , mismatch: 7, identity: 0.8

---ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
tctataaa---aattttattttaaaaaaagatatttat	Protospacer
   *****   *** ************** ******  

27. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_001855 (Borreliella burgdorferi B31 plasmid lp36, complete sequence) position: , mismatch: 7, identity: 0.8

---ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
tctataaa---aattttattttaaaaaaagatatttat	Protospacer
   *****   *** ************** ******  

28. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP019852 (Borreliella burgdorferi plasmid lp36, complete sequence) position: , mismatch: 7, identity: 0.8

---ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
tctataaa---aattttattttaaaaaaagatatttat	Protospacer
   *****   *** ************** ******  

29. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP019763 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp36, complete sequence) position: , mismatch: 7, identity: 0.8

---ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
tctataaa---aattttattttaaaaaaagatatttat	Protospacer
   *****   *** ************** ******  

30. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP015808 (Borrelia mayonii strain MN14-1539 plasmid lp36) position: , mismatch: 7, identity: 0.8

---ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
gctataaa---aattttattttaaaaaaagatatttat	Protospacer
   *****   *** ************** ******  

31. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP017216 (Borreliella burgdorferi strain B331 plasmid B331_lp36, complete sequence) position: , mismatch: 7, identity: 0.8

---ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
tctataaa---aattttattttaaaaaaagatatttat	Protospacer
   *****   *** ************** ******  

32. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP015793 (Borrelia mayonii strain MN14-1420 plasmid lp36, complete sequence) position: , mismatch: 7, identity: 0.8

---ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
gctataaa---aattttattttaaaaaaagatatttat	Protospacer
   *****   *** ************** ******  

33. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_019358 (Clostridium perfringens plasmid pCP8533S12 DNA, complete sequence) position: , mismatch: 7, identity: 0.8

ataaatataatattattttaaaaaaatatatttta-	CRISPR spacer
cttaatataataatattttaaaaatata-ataatag	Protospacer
 * ********* *********** *** **  ** 

34. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_MK275624 (Clostridium perfringens strain JXJA17 plasmid p6, complete sequence) position: , mismatch: 7, identity: 0.8

ataaatataatattattttaaaaaaatatatttta-	CRISPR spacer
cttaatataataatattttaaaaatata-ataatag	Protospacer
 * ********* *********** *** **  ** 

35. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP013045 (Clostridium perfringens strain JP55 plasmid pJFP55K, complete sequence) position: , mismatch: 7, identity: 0.8

ataaatataatattattttaaaaaaatatatttta-	CRISPR spacer
cttaatataataatattttaaaaatata-ataatag	Protospacer
 * ********* *********** *** **  ** 

36. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to KP836355 (Marinitoga camini virus 1, complete genome) position: , mismatch: 7, identity: 0.8

ataaatataatattattttaaaaaaatatatttta-	CRISPR spacer
acaaatataatattattttgataaaat-tgtgtaaa	Protospacer
*.*****************.* ***** *.* * * 

37. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to AY082070 (Bacteriophage phi3626, complete genome) position: , mismatch: 8, identity: 0.771

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
tgtgagataatattattgtaaaaaaatattttttt	Protospacer
   .* *********** *********** **** 

38. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_003524 (Clostridium phage phi3626, complete genome) position: , mismatch: 8, identity: 0.771

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
tgtgagataatattattgtaaaaaaatattttttt	Protospacer
   .* *********** *********** **** 

39. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP040855 (Lactobacillus johnsonii strain G2A plasmid unnamed1) position: , mismatch: 8, identity: 0.771

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
ttttttctaatataattttataaaaatatattttt	Protospacer
 *   * ****** ****** ************* 

40. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP040855 (Lactobacillus johnsonii strain G2A plasmid unnamed1) position: , mismatch: 8, identity: 0.771

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
actaagtaaatataattttataaaaatatattttt	Protospacer
*. **   ***** ****** ************* 

41. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP013040 (Clostridium perfringens strain JP838 plasmid pJFP838C, complete sequence) position: , mismatch: 8, identity: 0.771

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
agacactaaattttattttaaaataatatattttt	Protospacer
* * *.  *** *********** ********** 

42. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_KT020842 (Clostridium perfringens strain JP838 plasmid pJP838B, complete sequence) position: , mismatch: 8, identity: 0.771

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
agatactaaattttattttaaaataatatattttt	Protospacer
* * *.  *** *********** ********** 

43. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_011412 (Clostridium perfringens plasmid pCP8533etx, complete sequence) position: , mismatch: 8, identity: 0.771

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
agacactaaattttattttaaaataatatattttt	Protospacer
* * *.  *** *********** ********** 

44. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_010937 (Clostridium perfringens plasmid pCW3, complete sequence) position: , mismatch: 8, identity: 0.771

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
agacactaaattttattttaaaataatatattttt	Protospacer
* * *.  *** *********** ********** 

45. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP009558 (Clostridium perfringens strain FORC_003 plasmid pFORC3, complete sequence) position: , mismatch: 8, identity: 0.771

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
agacactaaattttattttaaaataatatattttt	Protospacer
* * *.  *** *********** ********** 

46. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_019687 (Clostridium perfringens plasmid pCpb2-CP1, complete sequence) position: , mismatch: 8, identity: 0.771

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
agacactaaattttattttaaaataatatattttt	Protospacer
* * *.  *** *********** ********** 

47. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_019688 (Clostridium perfringens plasmid pNetB-NE10, complete sequence) position: , mismatch: 8, identity: 0.771

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
agacactaaattttattttaaaataatatattttt	Protospacer
* * *.  *** *********** ********** 

48. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_008014 (Lawsonia intracellularis PHE/MN1-00 plasmid 3, complete sequence) position: , mismatch: 8, identity: 0.771

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
ttatttataatattattaaaaaaaaatatagatga	Protospacer
 **  ************  ***********  * *

49. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to LN835295 (Clostridium perfringens plasmid pJIR4150, complete sequence, strain JIR12708) position: , mismatch: 8, identity: 0.771

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
agacactaaattttattttaaaataatatattttt	Protospacer
* * *.  *** *********** ********** 

50. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_020130 (Lawsonia intracellularis N343 plasmid 3, complete sequence) position: , mismatch: 8, identity: 0.771

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
ttatttataatattattaaaaaaaaatatagatga	Protospacer
 **  ************  ***********  * *

51. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP023413 (Clostridium perfringens strain LLY_N11 plasmid pLLY_N11_3, complete sequence) position: , mismatch: 8, identity: 0.771

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
agatactaaattttattttaaaataatatattttt	Protospacer
* * *.  *** *********** ********** 

52. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_AP017631 (Clostridium perfringens strain CBA7123 plasmid pCBA7123-01, complete sequence) position: , mismatch: 8, identity: 0.771

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
agatactaaattttattttaaaataatatattttt	Protospacer
* * *.  *** *********** ********** 

53. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_019257 (Clostridium perfringens plasmid pJIR3844, complete sequence) position: , mismatch: 8, identity: 0.771

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
agacactaaattttattttaaaataatatattttt	Protospacer
* * *.  *** *********** ********** 

54. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_019259 (Clostridium perfringens plasmid pJIR3537, complete sequence) position: , mismatch: 8, identity: 0.771

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
agacactaaattttattttaaaataatatattttt	Protospacer
* * *.  *** *********** ********** 

55. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_015712 (Clostridium perfringens plasmid pCPPB-1, complete sequence) position: , mismatch: 8, identity: 0.771

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
agacactaaattttattttaaaacaatatattttt	Protospacer
* * *.  *** *********** ********** 

56. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to AP014503 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S42-C30, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 8, identity: 0.771

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
ataaatataatataattataaaaaaagagggtaaa	Protospacer
************* *** ******** * . *  *

57. spacer 2.9|1995407|33|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to CP016281 (Clostridium tyrobutyricum strain W428 plasmid pW428, complete sequence) position: , mismatch: 9, identity: 0.727

aaaactaataatctaatatcaaaaaaagcatta	CRISPR spacer
ataactcataatctaatttcaaaaaatcacctc	Protospacer
* **** ********** ********    .* 

58. spacer 2.9|1995407|33|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP014171 (Clostridium tyrobutyricum strain KCTC 5387 plasmid pCTK01, complete sequence) position: , mismatch: 9, identity: 0.727

aaaactaataatctaatatcaaaaaaagcatta	CRISPR spacer
ataactcataatctaatttcaaaaaatcacctc	Protospacer
* **** ********** ********    .* 

59. spacer 2.10|1995472|33|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to CP016281 (Clostridium tyrobutyricum strain W428 plasmid pW428, complete sequence) position: , mismatch: 9, identity: 0.727

aaaactaataatctaatatcaaaaaaagcatta	CRISPR spacer
ataactcataatctaatttcaaaaaatcacctc	Protospacer
* **** ********** ********    .* 

60. spacer 2.10|1995472|33|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP014171 (Clostridium tyrobutyricum strain KCTC 5387 plasmid pCTK01, complete sequence) position: , mismatch: 9, identity: 0.727

aaaactaataatctaatatcaaaaaaagcatta	CRISPR spacer
ataactcataatctaatttcaaaaaatcacctc	Protospacer
* **** ********** ********    .* 

61. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 9, identity: 0.743

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
tcctatataaaatttttttaaaaaaatataatatt	Protospacer
 .  ****** *** *************** * * 

62. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_009966 (Fluoribacter dumoffii Tex-KL plasmid pLD-TEX-KL, complete sequence) position: , mismatch: 9, identity: 0.743

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
ttaaaaataatattatttttaaaaaattaacctgc	Protospacer
 **** ************* *******  *..*  

63. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP053307 (Spiroplasma citri strain C5 plasmid pScpC5-3, complete sequence) position: , mismatch: 9, identity: 0.743

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
ttcatatttatattattttcaaaaaatttattttn	Protospacer
 * *   * ********** ******* ****** 

64. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP037428 (Myroides odoratimimus strain G13 plasmid pFM-G13, complete sequence) position: , mismatch: 9, identity: 0.743

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
ttcattataatattattttatacaaatatagcatt	Protospacer
 * * *************** * ******* . * 

65. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to JX569801 (Campylobacter phage CP30A, complete genome) position: , mismatch: 10, identity: 0.714

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
gattctataataatattttaaagaaatatattact	Protospacer
.    ******* *********.********* . 

66. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_015679 (Blattabacterium sp. (Blattella germanica) str. Bge plasmid pBge, complete sequence) position: , mismatch: 10, identity: 0.714

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
agaagtataatattatgttaaaaaaatgcaaggat	Protospacer
* **.*********** **********..*     

67. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to MK448599 (Streptococcus satellite phage Javan651, complete genome) position: , mismatch: 10, identity: 0.714

ataaatataatattattttaaaaaaatatatttta	CRISPR spacer
ttttgcatacttttattttaaaaaaatatatcatc	Protospacer
 *  ..*** * *******************. * 

68. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NC_007773 (Clostridium perfringens plasmid pCPF5603, complete sequence) position: , mismatch: 11, identity: 0.686

ataaatataatattattttaaaaaaatatatttta---	CRISPR spacer
---aaaaatatattattttaaaataaaatttagtatct	Protospacer
   ** *  ************** ** ** *  **   

69. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP013039 (Clostridium perfringens strain JP838 plasmid pJFP838D, complete sequence) position: , mismatch: 12, identity: 0.657

ataaatataatattattttaaaaaaatatatttta---	CRISPR spacer
---aaaaatatattattttaaaataaaatttagtgtct	Protospacer
   ** *  ************** ** ** *  *.   

70. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP025502 (Clostridium perfringens strain EHE-NE18 plasmid pJIR3535, complete sequence) position: , mismatch: 12, identity: 0.657

ataaatataatattattttaaaaaaatatatttta---	CRISPR spacer
---aaaaatatattattttaaaataaaatttagtgtct	Protospacer
   ** *  ************** ** ** *  *.   

71. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP025503 (Clostridium perfringens strain EHE-NE18 plasmid pJIR3844, complete sequence) position: , mismatch: 12, identity: 0.657

ataaatataatattattttaaaaaaatatatttta---	CRISPR spacer
---aaaaatatattattttaaaataaaatttagtgtct	Protospacer
   ** *  ************** ** ** *  *.   

72. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP025504 (Clostridium perfringens strain EHE-NE18 plasmid pJIR3537, complete sequence) position: , mismatch: 12, identity: 0.657

ataaatataatattattttaaaaaaatatatttta---	CRISPR spacer
---aaaaatatattattttaaaataaaatttagtgtct	Protospacer
   ** *  ************** ** ** *  *.   

73. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to CP031285 (Escherichia fergusonii strain 40A plasmid p46_40A, complete sequence) position: , mismatch: 12, identity: 0.657

ataaatataatattattttaaaaaaatatatttta---	CRISPR spacer
--agatat-atattttattgaaataatattattgctga	Protospacer
  *.**** ***** * **.*** *****  **     

74. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP022502 (Salmonella enterica subsp. enterica serovar Kentucky str. SA20030505 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

ataaatataatattattttaaaaaaatatatttta---	CRISPR spacer
--agatat-atattttattgaaataatattattgctga	Protospacer
  *.**** ***** * **.*** *****  **     

75. spacer 2.11|1995537|35|LS483299|CRT,CRISPRCasFinder,PILER-CR matches to MN693472 (Marine virus AFVG_25M86, complete genome) position: , mismatch: 12, identity: 0.657

ataaatataatattattttaaaaaaatat--atttta-	CRISPR spacer
---gttaataaatttttttaaaaaaatattaggattag	Protospacer
   . **  * *** **************  .  *** 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 158570 : 181163 28 Burkholderia_virus(10.0%) protease,integrase,terminase,capsid attL 169935:169950|attR 181358:181373
DBSCAN-SWA_2 1459599 : 1512856 59 Acinetobacter_phage(16.67%) capsid,tail,protease,integrase,tRNA attL 1504141:1504160|attR 1508246:1508265
DBSCAN-SWA_3 1568234 : 1572548 7 Haemophilus_phage(50.0%) NA NA
DBSCAN-SWA_4 1924207 : 1931041 9 Bacillus_phage(33.33%) tRNA NA
DBSCAN-SWA_5 1971051 : 1981602 14 Mannheimia_phage(70.0%) NA NA
DBSCAN-SWA_6 2012928 : 2021999 7 Erysipelothrix_phage(50.0%) NA NA
DBSCAN-SWA_7 2147229 : 2207178 86 Mannheimia_phage(39.58%) capsid,tail,portal,terminase,protease,tRNA,head NA
DBSCAN-SWA_8 2217306 : 2224563 12 uncultured_virus(33.33%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage