CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LS483303	Escherichia coli strain NCTC9967 genome assembly, chromosome: 1	8 crisprs	cas3,csa3,cas3HD,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,RT,DinG,c2c9_V-U4	0	47	13	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LS483303_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483303_1

952437-954236

Unclear

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

29 spacers

The CRISPR arrays of LS483303_1

>merge|LS483303|1|952437-954236|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGCCTCGCTGTAAATTCCAAAAACGATCTCTATAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCGTTTTTCGCAGCATTAACTTTTTGCCGCGGTGTTCCCCGCGCCAGCGGGGATAAACCGTATTCGTAGGGTTTGCGCCGGAAATAGGCGCTGTGTTCCCCGCGCCAGCGGGGATAAACCTTGATCCGCGACCGCCAGATGGCGCGGCCTGTCGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGCGCCAGCTATAAAAAACTCACCATCAACAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCCACCAGCGATAGAGCCGCAAACAGAGCCGGTGTTCCCCGCGCCAGCGGGGATAAACCGGATATGGCAATGAGTAAATATACATATTTAAACGTGTTCCCCGCGCCAGCGGGGATAAACCGATCCCCTGCGTCCTCTTTTGAATAATCGCGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCCATGACTATAAAAGCTTATATTTTGATAAATGTGTCCCCCGCGCCAGCGGGGATAAACCGGCGTCTCGAGCGCCGGACGATTCAAAACCAGCGTGTTCCCCGCGCCAGCGGGGATAAACCCAGGTCCTCGTCAGATACAGTAGTCACAACACCGTGTTCCCCGCGCCAGCGGGGATAAACCGCACTGACAGTGAAGCTGAATTACAGGCAGAGGGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGCTGTGGCTTTGTTTTTTGCTCTGATATATGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGTCCGTCAAAGAGGAAGCCAAAGCCATGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGACCACGCAGAGCGGCGACAACCTGACGTTGTGTTCCCCGCGCCAGCGGGGATAAACCGCTATAGCAGCACTCCACCAGCTCGAGCAGCAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCAAAAAAATAATATCCGGCAGTCTGTACGGTAGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGCAGGCCGGTAATATGAAAACGACAGAGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGTCGGTTTGCGCGTATTGTTGTTCGGGGTCTATGTGTTCCCCGCGCCAGCGGGGATAAACCGTAGGTAAATCACAGCTATTTGATAAGGGCATGTGTGTTCCCCGCGCCTGCGGGGATAAACCGCAGTTGAAGCGCTTTAAAAAATTCTGGACGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGAGATCGACATGAGCCGCCGCGCGACGAATAACGTGTTCCCCGCGCCAGCGGGGATAAACCGGACTATCGCGGGCTGCTGAAATCAACCGGCGAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGTCGAAATGAGGCGCGTGTTCTGGAGGATATGTGTTCCCCGCGCCAGCGGGGATAAACCTGTGTTTGCGGCATTAACGCTCACCAGCATTTCGTGTTCCCCGCGCCAGCGGGGATAAACCGACGTGGTCATGGGTGCTGCTGTTGCAGAGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGCAGATACACGGCTTTGTATTCCGTGCGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGAATAGCAATAGTCCATAGATTTGCGAAAACAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGAGCCTGACGAGACTACTGAGGCCGTTCTGTCGAGTTCCCCGCGCCAGCGGGGATAAACCA

>LS483303|1|1|952437-954235|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCTCGCTGTAAATTCCAAAAACGATCTCTATA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTTCGTTTTTCGCAGCATTAACTTTTTGCCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTATTCGTAGGGTTTGCGCCGGAAATAGGCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACC	TTGATCCGCGACCGCCAGATGGCGCGGCCTGTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGTGCGCCAGCTATAAAAAACTCACCATCAACA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGCCACCAGCGATAGAGCCGCAAACAGAGCCG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGATATGGCAATGAGTAAATATACATATTTAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GATCCCCTGCGTCCTCTTTTGAATAATCGCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCATGACTATAAAAGCTTATATTTTGATAAAT
GTGTCCCCCGCGCCAGCGGGGATAAACC	GGCGTCTCGAGCGCCGGACGATTCAAAACCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	CAGGTCCTCGTCAGATACAGTAGTCACAACACC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCACTGACAGTGAAGCTGAATTACAGGCAGAGG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTGGCTGTGGCTTTGTTTTTTGCTCTGATATAT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCGTCCGTCAAAGAGGAAGCCAAAGCCATGCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCGACCACGCAGAGCGGCGACAACCTGACGTT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCTATAGCAGCACTCCACCAGCTCGAGCAGCAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCAAAAAAATAATATCCGGCAGTCTGTACGGTA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTGGCAGGCCGGTAATATGAAAACGACAGAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTCGGTTTGCGCGTATTGTTGTTCGGGGTCTAT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTAGGTAAATCACAGCTATTTGATAAGGGCATGT
GTGTTCCCCGCGCCTGCGGGGATAAACC	GCAGTTGAAGCGCTTTAAAAAATTCTGGACGGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGATCGACATGAGCCGCCGCGCGACGAATAAC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGACTATCGCGGGCTGCTGAAATCAACCGGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGTCGAAATGAGGCGCGTGTTCTGGAGGATAT
GTGTTCCCCGCGCCAGCGGGGATAAACC	TGTGTTTGCGGCATTAACGCTCACCAGCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACC

>LS483303|1|1|952437-954236|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTCGCTGTAAATTCCAAAAACGATCTCTATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCGTTTTTCGCAGCATTAACTTTTTGCCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATTCGTAGGGTTTGCGCCGGAAATAGGCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCT	TGATCCGCGACCGCCAGATGGCGCGGCCTGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGCGCCAGCTATAAAAAACTCACCATCAACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCACCAGCGATAGAGCCGCAAACAGAGCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATATGGCAATGAGTAAATATACATATTTAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCCCTGCGTCCTCTTTTGAATAATCGCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATGACTATAAAAGCTTATATTTTGATAAAT
GTGTCCCCCGCGCCAGCGGGGATAAACCG	GCGTCTCGAGCGCCGGACGATTCAAAACCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCC	AGGTCCTCGTCAGATACAGTAGTCACAACACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACTGACAGTGAAGCTGAATTACAGGCAGAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCTGTGGCTTTGTTTTTTGCTCTGATATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTCCGTCAAAGAGGAAGCCAAAGCCATGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGACCACGCAGAGCGGCGACAACCTGACGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTATAGCAGCACTCCACCAGCTCGAGCAGCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAAAAAATAATATCCGGCAGTCTGTACGGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCAGGCCGGTAATATGAAAACGACAGAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGGTTTGCGCGTATTGTTGTTCGGGGTCTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAGGTAAATCACAGCTATTTGATAAGGGCATGT
GTGTTCCCCGCGCCTGCGGGGATAAACCG	CAGTTGAAGCGCTTTAAAAAATTCTGGACGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGATCGACATGAGCCGCCGCGCGACGAATAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACTATCGCGGGCTGCTGAAATCAACCGGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTCGAAATGAGGCGCGTGTTCTGGAGGATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GTGTTTGCGGCATTAACGCTCACCAGCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCA

>LS483303|1|1|952437-954236|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTCGCTGTAAATTCCAAAAACGATCTCTATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCGTTTTTCGCAGCATTAACTTTTTGCCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATTCGTAGGGTTTGCGCCGGAAATAGGCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCT	TGATCCGCGACCGCCAGATGGCGCGGCCTGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGCGCCAGCTATAAAAAACTCACCATCAACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCCACCAGCGATAGAGCCGCAAACAGAGCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATATGGCAATGAGTAAATATACATATTTAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCCCTGCGTCCTCTTTTGAATAATCGCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATGACTATAAAAGCTTATATTTTGATAAAT
GTGTCCCCCGCGCCAGCGGGGATAAACCG	GCGTCTCGAGCGCCGGACGATTCAAAACCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCC	AGGTCCTCGTCAGATACAGTAGTCACAACACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACTGACAGTGAAGCTGAATTACAGGCAGAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCTGTGGCTTTGTTTTTTGCTCTGATATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTCCGTCAAAGAGGAAGCCAAAGCCATGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGACCACGCAGAGCGGCGACAACCTGACGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTATAGCAGCACTCCACCAGCTCGAGCAGCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAAAAAATAATATCCGGCAGTCTGTACGGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCAGGCCGGTAATATGAAAACGACAGAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGGTTTGCGCGTATTGTTGTTCGGGGTCTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAGGTAAATCACAGCTATTTGATAAGGGCATGT
GTGTTCCCCGCGCCTGCGGGGATAAACCG	CAGTTGAAGCGCTTTAAAAAATTCTGGACGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGATCGACATGAGCCGCCGCGCGACGAATAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACTATCGCGGGCTGCTGAAATCAACCGGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTCGAAATGAGGCGCGTGTTCTGGAGGATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GTGTTTGCGGCATTAACGCTCACCAGCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCA

Protein	Signature genes	Signature genes Name	Protein_function
LS483303.1\|SQE42920.1\|951425_952097_+\|7-carboxy-7-deazaguanine-synthase;-queosine-biosynthesis	unknown	unknown	gnl\|CDD\|275126
LS483303.1\|SQE42916.1\|947177_948815_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
LS483303.1\|SQE42912.1\|943192_945427_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
LS483303.1\|SQE42922.1\|954782_955076_-\|IS1-protein-InsB	unknown	unknown	gnl\|CDD\|281403
LS483303.1\|SQE42911.1\|941843_943145_+\|23s-rRNA-(uracil-5-)-methyltransferase	unknown	unknown	gnl\|CDD\|237291
LS483303.1\|SQE42917.1\|948902_950201_+\|enolase	unknown	unknown	gnl\|CDD\|234617
LS483303.1\|SQE42919.1\|951146_951287_-\|small-protein-involved-in-the-cell-envelope-stress-response	unknown	unknown	unknown
LS483303.1\|SQE42926.1\|958763_959549_+\|putative-short-chain-dehydrogenase	unknown	unknown	gnl\|CDD\|187605
LS483303.1\|SQE42918.1\|950260_951133_-\|protein	unknown	unknown	gnl\|CDD\|224429
LS483303.1\|SQE42914.1\|945752_946088_+\|toxin-ChpA	unknown	unknown	gnl\|CDD\|182138
LS483303.1\|SQE42923.1\|955231_955447_+\|Insertion-element-protein	unknown	unknown	unknown
LS483303.1\|SQE42931.1\|961871_963281_+\|major-facilitator-superfamily-protein	unknown	unknown	gnl\|CDD\|340929
LS483303.1\|SQE42927.1\|959618_959714_+\|putative-FAD-binding-oxidoreductase	unknown	unknown	unknown
LS483303.1\|SQE42930.1\|960536_961850_+\|putative-FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
LS483303.1\|SQE42924.1\|955662_957141_-\|putative-sugar-kinase	unknown	unknown	gnl\|CDD\|212662
LS483303.1\|SQE42928.1\|959797_960013_-\|Insertion-element-protein	unknown	unknown	unknown
LS483303.1\|SQE42915.1\|946158_946950_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
LS483303.1\|SQE42929.1\|960168_960462_+\|IS1-protein-InsB	unknown	unknown	gnl\|CDD\|281403
LS483303.1\|SQE42913.1\|945504_945753_+\|antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
LS483303.1\|SQE42925.1\|957167_958445_-\|major-facilitator-superfamily-protein	unknown	unknown	gnl\|CDD\|349949

Protein	Function_ID	Function_description	E-value
LS483303.1\|SQE42920.1\|951425_952097_+\|7-carboxy-7-deazaguanine-synthase;-queosine-biosynthesis	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.93317e-154
LS483303.1\|SQE42916.1\|947177_948815_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
LS483303.1\|SQE42912.1\|943192_945427_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
LS483303.1\|SQE42922.1\|954782_955076_-\|IS1-protein-InsB	gnl\|CDD\|281403	pfam03400, DDE_Tnp_IS1, IS1 transposase. Transposase proteins are necessary for efficient DNA transposition. This family represents bacterial IS1 transposases.	8.42603e-54
LS483303.1\|SQE42911.1\|941843_943145_+\|23s-rRNA-(uracil-5-)-methyltransferase	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
LS483303.1\|SQE42917.1\|948902_950201_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
LS483303.1\|SQE42926.1\|958763_959549_+\|putative-short-chain-dehydrogenase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.9939e-139
LS483303.1\|SQE42918.1\|950260_951133_-\|protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	3.25867e-100
LS483303.1\|SQE42914.1\|945752_946088_+\|toxin-ChpA	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
LS483303.1\|SQE42925.1\|957167_958445_-\|major-facilitator-superfamily-protein	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	9.34062e-30
LS483303.1\|SQE42931.1\|961871_963281_+\|major-facilitator-superfamily-protein	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.64351e-51
LS483303.1\|SQE42930.1\|960536_961850_+\|putative-FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	2.4039e-80
LS483303.1\|SQE42924.1\|955662_957141_-\|putative-sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.27376e-109
LS483303.1\|SQE42915.1\|946158_946950_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
LS483303.1\|SQE42929.1\|960168_960462_+\|IS1-protein-InsB	gnl\|CDD\|281403	pfam03400, DDE_Tnp_IS1, IS1 transposase. Transposase proteins are necessary for efficient DNA transposition. This family represents bacterial IS1 transposases.	8.42603e-54
LS483303.1\|SQE42913.1\|945504_945753_+\|antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48

>LS483303.1|SQE42920.1|951425_952097_+|7-carboxy-7-deazaguanine-synthase;-queosine-biosynthesis
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCILDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>LS483303.1|SQE42919.1|951146_951287_-|small-protein-involved-in-the-cell-envelope-stress-response
MSEENKENGFNHVKTFTKIIFIFSVLVFNDNEYKITDAAVNLFIQI
>LS483303.1|SQE42918.1|950260_951133_-|protein
MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTHKLESIFNNTQVQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIVVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAKGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGRSYHSDNSGSAGGSDSGGFSGGGGSSGGGGASGRW
>LS483303.1|SQE42917.1|948902_950201_+|enolase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>LS483303.1|SQE42916.1|947177_948815_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>LS483303.1|SQE42915.1|946158_946950_+|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>LS483303.1|SQE42914.1|945752_946088_+|toxin-ChpA
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>LS483303.1|SQE42913.1|945504_945753_+|antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>LS483303.1|SQE42912.1|943192_945427_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>LS483303.1|SQE42911.1|941843_943145_+|23s-rRNA-(uracil-5-)-methyltransferase
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>LS483303.1|SQE42922.1|954782_955076_-|IS1-protein-InsB
MAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
>LS483303.1|SQE42923.1|955231_955447_+|Insertion-element-protein
MAENRVEANAHNAGGCPASNAIHGHINDFLVRTGLRSGVSELQLPCFTAVRAEIALMSGSAFAVTHHPVSS
>LS483303.1|SQE42924.1|955662_957141_-|putative-sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>LS483303.1|SQE42925.1|957167_958445_-|major-facilitator-superfamily-protein
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATNPPLWVMLCIQIAFAITTILMLWSVSIKATSLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLTLTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALGMVIVFTFLLFQKIRTADSAPAMASSK
>LS483303.1|SQE42926.1|958763_959549_+|putative-short-chain-dehydrogenase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASQASNYVNGHLLVVDGGYLVR
>LS483303.1|SQE42927.1|959618_959714_+|putative-FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKR
>LS483303.1|SQE42928.1|959797_960013_-|Insertion-element-protein
MAENRVEANAHNAGGCPASNAIHGHINDFLVRTGLRSGVSELQLPCFTAVRAEIALMSGSAFAVTHHPVSS
>LS483303.1|SQE42929.1|960168_960462_+|IS1-protein-InsB
MAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
>LS483303.1|SQE42930.1|960536_961850_+|putative-FAD-binding-oxidoreductase
MPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>LS483303.1|SQE42931.1|961871_963281_+|major-facilitator-superfamily-protein
MTGRCLFGFSGEKPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRIAVLTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV

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Crispr_ID: LS483303_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483303_2

977330-977907

Unclear

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GNGTTCCCCGCGNCAGCGGGGATAAACCG	CRT
GTTCCCCGCGTCAGCGGGGATAAACCG	PILER-CR

9 spacers

cas2,cas1,cas6e,cas5,cas7,cas3HD

The CRISPR arrays of LS483303_2

>merge|LS483303|2|977330-977907|CRISPRCasFinder,CRT,PILER-CR
GAGTTCCCCGCGTCAGCGGGGATAAACCGAATGGCCGGGTGGTGATGGGTTCCCGTTCACTGAGTTCCCCGCGTCAGCGGGGATAAACCGTGGCTGAGTACTTCGGCAAACGACACGGCGATGAGTTCCCCGCGTCAGCGGGGATAAACCGTGTTTTCCTGCAATAAAACGACGCTCGTTACGGAGTTCCCCGCGTCAGCGGGGATAAACCGAGATTGGTTTTCCAGTCTTTGGCGGTTGGCAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCTGTGCCGGTAGCCCCCTCCCTGTTCAGCCTCGTGTTCCCCGCGCCAGCGGGGATAAACCGTGTTTTAGAGATGTGTATTCAAAATCAGATAGGAGTTCCCCGCGTCAGCGGGGATAAACCGAAATTGATCCCAGGGTGATTATCGTGGGGATCGTGTTCCCCGCGCCAGCGGGGATAAACCGATTTCTTTAATTATTTAGCTGATGCTTTTAAAGTGTTCCCCACGCCAGCGGGGATAAACCGGGTAAAAACACGGTCTGAACCGACATTCATGTGTGTTCCCCGCGTCAGCGGGGATAAACCG

>LS483303|2|2|977330-977907|CRISPRCasFinder
GAGTTCCCCGCGTCAGCGGGGATAAACCG	AATGGCCGGGTGGTGATGGGTTCCCGTTCACT
GAGTTCCCCGCGTCAGCGGGGATAAACCG	TGGCTGAGTACTTCGGCAAACGACACGGCGAT
GAGTTCCCCGCGTCAGCGGGGATAAACCG	TGTTTTCCTGCAATAAAACGACGCTCGTTACG
GAGTTCCCCGCGTCAGCGGGGATAAACCG	AGATTGGTTTTCCAGTCTTTGGCGGTTGGCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGTGCCGGTAGCCCCCTCCCTGTTCAGCCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTTTTAGAGATGTGTATTCAAAATCAGATAG
GAGTTCCCCGCGTCAGCGGGGATAAACCG	AAATTGATCCCAGGGTGATTATCGTGGGGATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTCTTTAATTATTTAGCTGATGCTTTTAAA
GTGTTCCCCACGCCAGCGGGGATAAACCG	GGTAAAAACACGGTCTGAACCGACATTCATGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG

>LS483303|2|2|977330-977907|CRT
GAGTTCCCCGCGTCAGCGGGGATAAACCG	AATGGCCGGGTGGTGATGGGTTCCCGTTCACT
GAGTTCCCCGCGTCAGCGGGGATAAACCG	TGGCTGAGTACTTCGGCAAACGACACGGCGAT
GAGTTCCCCGCGTCAGCGGGGATAAACCG	TGTTTTCCTGCAATAAAACGACGCTCGTTACG
GAGTTCCCCGCGTCAGCGGGGATAAACCG	AGATTGGTTTTCCAGTCTTTGGCGGTTGGCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGTGCCGGTAGCCCCCTCCCTGTTCAGCCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTTTTAGAGATGTGTATTCAAAATCAGATAG
GAGTTCCCCGCGTCAGCGGGGATAAACCG	AAATTGATCCCAGGGTGATTATCGTGGGGATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTCTTTAATTATTTAGCTGATGCTTTTAAA
GTGTTCCCCACGCCAGCGGGGATAAACCG	GGTAAAAACACGGTCTGAACCGACATTCATGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG

>LS483303|2|2|977393-977907|PILER-CR
GTTCCCCGCGTCAGCGGGGATAAACCG	TGGCTGAGTACTTCGGCAAACGACACGGCGATGA
GTTCCCCGCGTCAGCGGGGATAAACCG	TGTTTTCCTGCAATAAAACGACGCTCGTTACGGA
GTTCCCCGCGTCAGCGGGGATAAACCG	AGATTGGTTTTCCAGTCTTTGGCGGTTGGCAAGT
GTTCCCCGCGCCAGCGGGGATAAACCG	CTGTGCCGGTAGCCCCCTCCCTGTTCAGCCTCGT
GTTCCCCGCGCCAGCGGGGATAAACCG	TGTTTTAGAGATGTGTATTCAAAATCAGATAGGA
GTTCCCCGCGTCAGCGGGGATAAACCG	AAATTGATCCCAGGGTGATTATCGTGGGGATCGT
GTTCCCCGCGCCAGCGGGGATAAACCG	ATTTCTTTAATTATTTAGCTGATGCTTTTAAAGT
GTTCCCCACGCCAGCGGGGATAAACCG	GGTAAAAACACGGTCTGAACCGACATTCATGTGT
GTTCCCCGCGTCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
LS483303.1\|SQE42946.1\|975405_976005_+\|CRISPR-associated-Cse3-family-protein	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
LS483303.1\|SQE42958.1\|985332_986094_+\|stationary-phase-survival-protein-SurE	unknown	unknown	gnl\|CDD\|234732
LS483303.1\|SQE42944.1\|974487_974742_+\|CRISPR-associated-Cse4-family-protein	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
LS483303.1\|SQE42939.1\|969714_971427_+\|sulfite-reductase-(NADPH)-hemoprotein-beta-subunit	unknown	unknown	gnl\|CDD\|237402
LS483303.1\|SQE42950.1\|979277_980186_+\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235375
LS483303.1\|SQE42947.1\|976020_976938_+\|putative-CRISPR-associated-protein-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
LS483303.1\|SQE42949.1\|977988_979026_-\|alkaline-phosphatase-isozyme-conversion-protein	unknown	unknown	gnl\|CDD\|182299
LS483303.1\|SQE42951.1\|980187_981615_+\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235349
LS483303.1\|SQE42954.1\|982786_983098_+\|cell-division-protein	unknown	unknown	gnl\|CDD\|179156
LS483303.1\|SQE42955.1\|983116_983827_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
LS483303.1\|SQE42945.1\|974744_975419_+\|CRISPR-associated-Cas5-family-Ecoli-subtype-protein	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|273842
LS483303.1\|SQE42942.1\|973094_973397_+\|transposase-Orf1-of-IS3-family-IS-element	unknown	unknown	gnl\|CDD\|225511
LS483303.1\|SQE42940.1\|971500_972235_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
LS483303.1\|SQE42957.1\|984302_985352_+\|tRNA-pseudouridine-synthase-D	unknown	unknown	gnl\|CDD\|234884
LS483303.1\|SQE42956.1\|983826_984306_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
LS483303.1\|SQE42943.1\|973609_974242_+\|putative-transposase	unknown	unknown	gnl\|CDD\|222853
LS483303.1\|SQE42953.1\|982269_982593_+\|putative-cytochrome-oxidase-subunit	unknown	unknown	gnl\|CDD\|371891
LS483303.1\|SQE42948.1\|976939_977224_+\|CRISPR-associated-protein-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
LS483303.1\|SQE42941.1\|972593_973025_+\|CRISPR-associated-helicase-Cas3	cas3HD	cd09641_cas3HD_CAS-I	gnl\|CDD\|182031
LS483303.1\|SQE42952.1\|981614_982220_+\|adenosine-5-phosphosulfate-kinase	unknown	unknown	gnl\|CDD\|179661

Protein	Function_ID	Function_description	E-value
LS483303.1\|SQE42946.1\|975405_976005_+\|CRISPR-associated-Cse3-family-protein	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.98387e-100
LS483303.1\|SQE42958.1\|985332_986094_+\|stationary-phase-survival-protein-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
LS483303.1\|SQE42944.1\|974487_974742_+\|CRISPR-associated-Cse4-family-protein	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	1.72054e-16
LS483303.1\|SQE42939.1\|969714_971427_+\|sulfite-reductase-(NADPH)-hemoprotein-beta-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
LS483303.1\|SQE42950.1\|979277_980186_+\|sulfate-adenylyltransferase	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
LS483303.1\|SQE42947.1\|976020_976938_+\|putative-CRISPR-associated-protein-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	7.0738e-159
LS483303.1\|SQE42949.1\|977988_979026_-\|alkaline-phosphatase-isozyme-conversion-protein	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
LS483303.1\|SQE42951.1\|980187_981615_+\|sulfate-adenylyltransferase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
LS483303.1\|SQE42954.1\|982786_983098_+\|cell-division-protein	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
LS483303.1\|SQE42955.1\|983116_983827_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121
LS483303.1\|SQE42945.1\|974744_975419_+\|CRISPR-associated-Cas5-family-Ecoli-subtype-protein	gnl\|CDD\|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	1.89481e-101
LS483303.1\|SQE42942.1\|973094_973397_+\|transposase-Orf1-of-IS3-family-IS-element	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	4.19813e-15
LS483303.1\|SQE42940.1\|971500_972235_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	3.61111e-137
LS483303.1\|SQE42957.1\|984302_985352_+\|tRNA-pseudouridine-synthase-D	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
LS483303.1\|SQE42956.1\|983826_984306_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
LS483303.1\|SQE42943.1\|973609_974242_+\|putative-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.90852e-118
LS483303.1\|SQE42953.1\|982269_982593_+\|putative-cytochrome-oxidase-subunit	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
LS483303.1\|SQE42948.1\|976939_977224_+\|CRISPR-associated-protein-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.9552e-61
LS483303.1\|SQE42941.1\|972593_973025_+\|CRISPR-associated-helicase-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	7.19503e-72
LS483303.1\|SQE42952.1\|981614_982220_+\|adenosine-5-phosphosulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148

>LS483303.1|SQE42948.1|976939_977224_+|CRISPR-associated-protein-Cas2
MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGVVSARIREMIWEQISGLAEEGNVVMAWATNTESGFEFQTFGVNRRTPVDLDGLRLVSFLPV
>LS483303.1|SQE42947.1|976020_976938_+|putative-CRISPR-associated-protein-Cas1
MAWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTVNQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS
>LS483303.1|SQE42946.1|975405_976005_+|CRISPR-associated-Cse3-family-protein
MYLSKIIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGEGKNGKIQTVCFEGVLTINDAPALIDLLQQGIGPAKSMGCGLLSLAPL
>LS483303.1|SQE42945.1|974744_975419_+|CRISPR-associated-Cas5-family-Ecoli-subtype-protein
MKSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTIAIWLTPQATMVMSELEKAVLKPRYTPYLGRRSCPLTHPLFLATCQASDPQKALLNYEPVGGDIYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ
>LS483303.1|SQE42944.1|974487_974742_+|CRISPR-associated-Cse4-family-protein
MVNFSDMPLSMANAFEKAVKAKDGFLQPSLQAFNQYWDRVANGYGLNGAAAQFSLSDVDPITGQVQQMPTLEQLKSWVRNNGEA
>LS483303.1|SQE42943.1|973609_974242_+|putative-transposase
MGRWLAGRLMKELGLVSCQQPTYRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKPVGVMFHSDQGSHYTSRQFRQLLWRYRIRQSMSRRGNCWDNSPMERFFRSLKNEWVPATGYVSFSDAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKKL
>LS483303.1|SQE42942.1|973094_973397_+|transposase-Orf1-of-IS3-family-IS-element
MKKRNFSAEFKRESAQLVVDQNYTVADAASAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATALLMSDSLNSSR
>LS483303.1|SQE42941.1|972593_973025_+|CRISPR-associated-helicase-Cas3
MEPFKYICHYWGKSSKSLTKGNDIHLLIYHCLDVAAVADCWWDQSVVLQNTFCRNEMLSKQRVKAWLLFFIALHDIGKFDIRFQYKSAESWLKLNPATPSLNGPSTQMCRKFNHGAAGLYWFNQDSLSEQSLGDFFSFFDAAP
>LS483303.1|SQE42940.1|971500_972235_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAQLEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>LS483303.1|SQE42939.1|969714_971427_+|sulfite-reductase-(NADPH)-hemoprotein-beta-subunit
MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
>LS483303.1|SQE42949.1|977988_979026_-|alkaline-phosphatase-isozyme-conversion-protein
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>LS483303.1|SQE42950.1|979277_980186_+|sulfate-adenylyltransferase
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>LS483303.1|SQE42951.1|980187_981615_+|sulfate-adenylyltransferase
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>LS483303.1|SQE42952.1|981614_982220_+|adenosine-5-phosphosulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>LS483303.1|SQE42953.1|982269_982593_+|putative-cytochrome-oxidase-subunit
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>LS483303.1|SQE42954.1|982786_983098_+|cell-division-protein
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>LS483303.1|SQE42955.1|983116_983827_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>LS483303.1|SQE42956.1|983826_984306_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>LS483303.1|SQE42957.1|984302_985352_+|tRNA-pseudouridine-synthase-D
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>LS483303.1|SQE42958.1|985332_986094_+|stationary-phase-survival-protein-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW

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Crispr_ID: LS483303_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483303_3

1504419-1504536

Orphan

Consensus_repeat	Method
CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of LS483303_3

>merge|LS483303|3|1504419-1504536|CRISPRCasFinder
CCGAGCCGTAGGCCGGATAAGGCGTTCACGCTGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAACCGAGCCGTAGGCCGGATAAGGCGTTTACGC

>LS483303|3|3|1504419-1504536|CRISPRCasFinder
CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	TGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAA
CCGAGCCGTAGGCCGGATAAGGCGTTTACGC

Protein	Signature genes	Signature genes Name	Protein_function
LS483303.1\|SQE43448.1\|1516746_1517370_+\|protein	unknown	unknown	gnl\|CDD\|225774
LS483303.1\|SQE43433.1\|1493899_1494802_-\|transposase-YhgA-family-protein	unknown	unknown	gnl\|CDD\|182167
LS483303.1\|SQE43434.1\|1494994_1496185_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
LS483303.1\|SQE43452.1\|1524412_1525597_-\|acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
LS483303.1\|SQE43451.1\|1523562_1524339_+\|DUF2135-family-protein,-function-uncharacterised	unknown	unknown	gnl\|CDD\|227021
LS483303.1\|SQE43445.1\|1511416_1512139_-\|3-demethylubiquinone-9-3-methyltransferase	unknown	unknown	gnl\|CDD\|235350
LS483303.1\|SQE43450.1\|1521908_1523558_+\|protein	unknown	unknown	gnl\|CDD\|227732
LS483303.1\|SQE43444.1\|1507536_1511289_+\|adhesin	unknown	unknown	gnl\|CDD\|182059
LS483303.1\|SQE43440.1\|1502233_1502884_+\|pH-inducible-protein-involved-in-stress-response-(putative-kinase)	unknown	unknown	gnl\|CDD\|182136
LS483303.1\|SQE43442.1\|1503191_1504322_-\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|181647
LS483303.1\|SQE43437.1\|1499331_1500690_+\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
LS483303.1\|SQE43443.1\|1504555_1506841_-\|ribonucleoside-diphosphate-reductase	unknown	unknown	gnl\|CDD\|181649
LS483303.1\|SQE43439.1\|1501812_1502019_-\|yfaH	unknown	unknown	gnl\|CDD\|182050
LS483303.1\|SQE43446.1\|1512285_1514913_+\|DNA-gyrase-subunit-A	unknown	unknown	gnl\|CDD\|235502
LS483303.1\|SQE43441.1\|1502937_1503192_-\|putative-ferredoxin	unknown	unknown	gnl\|CDD\|182668
LS483303.1\|SQE43449.1\|1517513_1521908_+\|large-extracellular-alpha-helical-protein	unknown	unknown	gnl\|CDD\|225248
LS483303.1\|SQE43447.1\|1515061_1516750_+\|putative-membrane-protein-YfaA	unknown	unknown	gnl\|CDD\|227030
LS483303.1\|SQE43436.1\|1497430_1499059_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
LS483303.1\|SQE43438.1\|1500694_1501771_+\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
LS483303.1\|SQE43435.1\|1496181_1497441_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-B	unknown	unknown	gnl\|CDD\|225617

Protein	Function_ID	Function_description	E-value
LS483303.1\|SQE43448.1\|1516746_1517370_+\|protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	7.99004e-141
LS483303.1\|SQE43433.1\|1493899_1494802_-\|transposase-YhgA-family-protein	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0
LS483303.1\|SQE43434.1\|1494994_1496185_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
LS483303.1\|SQE43452.1\|1524412_1525597_-\|acetyl-CoA-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
LS483303.1\|SQE43451.1\|1523562_1524339_+\|DUF2135-family-protein,-function-uncharacterised	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	4.17009e-153
LS483303.1\|SQE43445.1\|1511416_1512139_-\|3-demethylubiquinone-9-3-methyltransferase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	1.58484e-171
LS483303.1\|SQE43450.1\|1521908_1523558_+\|protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	2.23972e-127
LS483303.1\|SQE43444.1\|1507536_1511289_+\|adhesin	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0
LS483303.1\|SQE43440.1\|1502233_1502884_+\|pH-inducible-protein-involved-in-stress-response-(putative-kinase)	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	2.86156e-158
LS483303.1\|SQE43442.1\|1503191_1504322_-\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
LS483303.1\|SQE43437.1\|1499331_1500690_+\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
LS483303.1\|SQE43443.1\|1504555_1506841_-\|ribonucleoside-diphosphate-reductase	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
LS483303.1\|SQE43439.1\|1501812_1502019_-\|yfaH	gnl\|CDD\|182050	PRK09729, PRK09729, hypothetical protein; Provisional.	1.13329e-36
LS483303.1\|SQE43446.1\|1512285_1514913_+\|DNA-gyrase-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
LS483303.1\|SQE43441.1\|1502937_1503192_-\|putative-ferredoxin	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53
LS483303.1\|SQE43449.1\|1517513_1521908_+\|large-extracellular-alpha-helical-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
LS483303.1\|SQE43447.1\|1515061_1516750_+\|putative-membrane-protein-YfaA	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
LS483303.1\|SQE43436.1\|1497430_1499059_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
LS483303.1\|SQE43438.1\|1500694_1501771_+\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
LS483303.1\|SQE43435.1\|1496181_1497441_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-B	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0

>LS483303.1|SQE43442.1|1503191_1504322_-|ribonucleotide-diphosphate-reductase-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL
>LS483303.1|SQE43441.1|1502937_1503192_-|putative-ferredoxin
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>LS483303.1|SQE43440.1|1502233_1502884_+|pH-inducible-protein-involved-in-stress-response-(putative-kinase)
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGNAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>LS483303.1|SQE43439.1|1501812_1502019_-|yfaH
MNFIRQGLGIALQPELTLKSIAGELCSVPLEPTFYRQISLLAKEKPVEGSPLFLLQMCMEQLVAIGKI
>LS483303.1|SQE43438.1|1500694_1501771_+|glycerophosphodiester-phosphodiesterase
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>LS483303.1|SQE43437.1|1499331_1500690_+|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRNGG
>LS483303.1|SQE43436.1|1497430_1499059_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>LS483303.1|SQE43435.1|1496181_1497441_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-B
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVADIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVHQGGVLMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
>LS483303.1|SQE43434.1|1494994_1496185_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSIAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>LS483303.1|SQE43433.1|1493899_1494802_-|transposase-YhgA-family-protein
MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLEQGFDRDQVLAATQLSEADLAANNH
>LS483303.1|SQE43443.1|1504555_1506841_-|ribonucleoside-diphosphate-reductase
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>LS483303.1|SQE43444.1|1507536_1511289_+|adhesin
MRIIFLRKEYLSLLPSMIASLFSANGVAAVTDSCQGYDVKASCQASRQSLSGITQDWSIADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIVNNTAFTNNTAEGYGGAIYTNSVTAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDQYQNQAELNVGSTQQTFVHALTGFQNGTLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVVDASDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITSDVDTRSDAAGHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDIQSIDAISSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSNVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVMNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPEPDPTPDPDPTPDPDPTPDPAPVPVYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGTDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWFSNDVSEQEDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANRARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTISDDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW
>LS483303.1|SQE43445.1|1511416_1512139_-|3-demethylubiquinone-9-3-methyltransferase
MNAEKSPENHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQNK
>LS483303.1|SQE43446.1|1512285_1514913_+|DNA-gyrase-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>LS483303.1|SQE43447.1|1515061_1516750_+|putative-membrane-protein-YfaA
MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETVPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIAGDLLSGKKRWQASFGLEERTAEKTPVRQRIVVSARWLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDESASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGAAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKPFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQTLNKTRPAMVDVIPTDGIVPLYINPQGIAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>LS483303.1|SQE43448.1|1516746_1517370_+|protein
MRHGLLALICWLCCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGLSSQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>LS483303.1|SQE43449.1|1517513_1521908_+|large-extracellular-alpha-helical-protein
MRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVEQFRYPLWQAKPFEPQQGVKLEGASSNFISPQPGNIYIPLGQQEPGLYLVEAMVGGYRATTVVFVSDTVALSKVSGKELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGVTDDSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVIGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVNVTLDARNGGQGSFRLPENAVAGGYELRLAYRNQVYSSSFRVANYIKPHFEIGLALDKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDASGHVTLNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTAHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLPFVDNSWPVEQQKNVMLGGGDNALMLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYADWQASQAIGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKTEDFSEEDTRDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQTAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEDWRWVGQGVPDILSFGDELSPQNVQVRWREPAKTAQQSNIPVTVERQLYRLIPGEEEMSFTLQPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAAKQQGQLLEKARNEMGELAYMVPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPAQQSVAAGSEWTGMQVK
>LS483303.1|SQE43450.1|1521908_1523558_+|protein
MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGVTKVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVNPGVLNGHYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWTQDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQAETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>LS483303.1|SQE43451.1|1523562_1524339_+|DUF2135-family-protein,-function-uncharacterised
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPIHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>LS483303.1|SQE43452.1|1524412_1525597_-|acetyl-CoA-acetyltransferase
MKNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKANSTAEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESAALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKNLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN

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Crispr_ID: LS483303_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483303_4

2124102-2124225

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of LS483303_4

>merge|LS483303|4|2124102-2124225|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>LS483303|4|4|2124102-2124225|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
LS483303.1\|SQE44030.1\|2134780_2135362_-\|superoxide-dismutase	unknown	unknown	gnl\|CDD\|182534
LS483303.1\|SQE44019.1\|2120318_2121104_+\|putative-oxidoreductase,-cytochrome-b-subunit	unknown	unknown	gnl\|CDD\|184968
LS483303.1\|SQE44015.1\|2116189_2116816_+\|putative-oxidoreductase-Fe-S-subunit	unknown	unknown	gnl\|CDD\|182135
LS483303.1\|SQE44029.1\|2133376_2134546_+\|major-facilitator-superfamily-protein	unknown	unknown	gnl\|CDD\|225371
LS483303.1\|SQE44028.1\|2131797_2132823_-\|purine-nucleotide-synthesis-repressor	unknown	unknown	gnl\|CDD\|236739
LS483303.1\|SQE44031.1\|2135489_2136305_-\|putative-exported-hydrolase	unknown	unknown	gnl\|CDD\|366353
LS483303.1\|SQE44025.1\|2128105_2129254_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
LS483303.1\|SQE44018.1\|2119653_2120322_+\|putative-oxidoreductase-Fe-S-subunit	unknown	unknown	gnl\|CDD\|274451
LS483303.1\|SQE44027.1\|2130868_2131801_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
LS483303.1\|SQE44021.1\|2121931_2123536_-\|conserved-protein-with-FAD/NAD(P)-binding-domain	unknown	unknown	gnl\|CDD\|182134
LS483303.1\|SQE44024.1\|2127424_2128066_+\|riboflavin-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|183846
LS483303.1\|SQE44014.1\|2115525_2115735_+\|protein	unknown	unknown	gnl\|CDD\|182359
LS483303.1\|SQE44012.1\|2113009_2113246_-\|murein-lipoprotein	unknown	unknown	gnl\|CDD\|185294
LS483303.1\|SQE44026.1\|2129544_2130756_-\|major-facilitator-superfamily-protein	unknown	unknown	gnl\|CDD\|182924
LS483303.1\|SQE44022.1\|2124539_2125796_+\|Fluffing-protein	unknown	unknown	gnl\|CDD\|137602
LS483303.1\|SQE44013.1\|2113556_2114969_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|181699
LS483303.1\|SQE44017.1\|2118951_2119590_+\|putative-oxidoreductase-subunit	unknown	unknown	gnl\|CDD\|182160
LS483303.1\|SQE44023.1\|2125836_2127210_-\|multidrug-resistance-protein	unknown	unknown	gnl\|CDD\|234981
LS483303.1\|SQE44020.1\|2121155_2121920_+\|putative-oxidoreductase-subunit	unknown	unknown	gnl\|CDD\|182159
LS483303.1\|SQE44016.1\|2116836_2118939_+\|putative-aldehyde-ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|236629

Protein	Function_ID	Function_description	E-value
LS483303.1\|SQE44030.1\|2134780_2135362_-\|superoxide-dismutase	gnl\|CDD\|182534	PRK10543, PRK10543, superoxide dismutase [Fe].	3.82658e-138
LS483303.1\|SQE44019.1\|2120318_2121104_+\|putative-oxidoreductase,-cytochrome-b-subunit	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	1.09976e-163
LS483303.1\|SQE44015.1\|2116189_2116816_+\|putative-oxidoreductase-Fe-S-subunit	gnl\|CDD\|182135	PRK09898, PRK09898, ferredoxin-like protein.	6.99609e-140
LS483303.1\|SQE44029.1\|2133376_2134546_+\|major-facilitator-superfamily-protein	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	1.92383e-98
LS483303.1\|SQE44028.1\|2131797_2132823_-\|purine-nucleotide-synthesis-repressor	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
LS483303.1\|SQE44031.1\|2135489_2136305_-\|putative-exported-hydrolase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	3.24602e-46
LS483303.1\|SQE44025.1\|2128105_2129254_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
LS483303.1\|SQE44018.1\|2119653_2120322_+\|putative-oxidoreductase-Fe-S-subunit	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	7.32003e-76
LS483303.1\|SQE44027.1\|2130868_2131801_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
LS483303.1\|SQE44021.1\|2121931_2123536_-\|conserved-protein-with-FAD/NAD(P)-binding-domain	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
LS483303.1\|SQE44024.1\|2127424_2128066_+\|riboflavin-synthase-subunit-alpha	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	2.24506e-123
LS483303.1\|SQE44014.1\|2115525_2115735_+\|protein	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	2.11502e-34
LS483303.1\|SQE44012.1\|2113009_2113246_-\|murein-lipoprotein	gnl\|CDD\|185294	PRK15396, PRK15396, major outer membrane lipoprotein.	2.83509e-37
LS483303.1\|SQE44026.1\|2129544_2130756_-\|major-facilitator-superfamily-protein	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
LS483303.1\|SQE44022.1\|2124539_2125796_+\|Fluffing-protein	gnl\|CDD\|137602	PRK09945, PRK09945, hypothetical protein; Provisional.	0
LS483303.1\|SQE44013.1\|2113556_2114969_-\|pyruvate-kinase	gnl\|CDD\|181699	PRK09206, PRK09206, pyruvate kinase PykF.	0
LS483303.1\|SQE44017.1\|2118951_2119590_+\|putative-oxidoreductase-subunit	gnl\|CDD\|182160	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein.	7.60222e-120
LS483303.1\|SQE44023.1\|2125836_2127210_-\|multidrug-resistance-protein	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
LS483303.1\|SQE44020.1\|2121155_2121920_+\|putative-oxidoreductase-subunit	gnl\|CDD\|182159	PRK09946, PRK09946, hypothetical protein; Provisional.	5.77446e-163
LS483303.1\|SQE44016.1\|2116836_2118939_+\|putative-aldehyde-ferredoxin-oxidoreductase	gnl\|CDD\|236629	PRK09849, PRK09849, putative oxidoreductase; Provisional.	0

>LS483303.1|SQE44021.1|2121931_2123536_-|conserved-protein-with-FAD/NAD(P)-binding-domain
MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPIYCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARKQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVIATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVVFHRDNASEKLNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYKMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFHGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD
>LS483303.1|SQE44020.1|2121155_2121920_+|putative-oxidoreductase-subunit
MYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGERPFCSQFARSDDHARIGCCEDNARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVASNGDLVQIASFGANARVANSGDNVHIIASGENSTVVSTGVVDSIILGPGGSAALVYHDGERVRFAVAIEGENNIRAGVRYRLNEQHQFVEC
>LS483303.1|SQE44019.1|2120318_2121104_+|putative-oxidoreductase,-cytochrome-b-subunit
MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSATDHGEKIYLYSKAVRLWHWSNALLFVLLLASGLINHFALVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGGNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQTHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH
>LS483303.1|SQE44018.1|2119653_2120322_+|putative-oxidoreductase-Fe-S-subunit
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQDNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
>LS483303.1|SQE44017.1|2118951_2119590_+|putative-oxidoreductase-subunit
MNHQDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYLVAEEELSVLLESIKQNGDYADIACLTGSKDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
>LS483303.1|SQE44016.1|2116836_2118939_+|putative-aldehyde-ferredoxin-oxidoreductase
MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIRWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPA
>LS483303.1|SQE44015.1|2116189_2116816_+|putative-oxidoreductase-Fe-S-subunit
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
>LS483303.1|SQE44014.1|2115525_2115735_+|protein
MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAMETVINALVK
>LS483303.1|SQE44013.1|2113556_2114969_-|pyruvate-kinase
MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
>LS483303.1|SQE44012.1|2113009_2113246_-|murein-lipoprotein
MKATKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNMATKYRK
>LS483303.1|SQE44022.1|2124539_2125796_+|Fluffing-protein
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGTGWLKVATGGIVKCTQYGNNGTLSVSDGAIATDVVQSEGGAISLSTLATVNGRHPEGEFSVDQGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGAELQQSTITVQQGGVLILDGSTVKGDSVTFIVGNINLNGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIRVEITDASRQTLCNALKLQPDEDGIGATLQPA
>LS483303.1|SQE44023.1|2125836_2127210_-|multidrug-resistance-protein
MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALAEKAVGYLRALLWGAPGYLFFQVARNLCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDSAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSAIILQRASR
>LS483303.1|SQE44024.1|2127424_2128066_+|riboflavin-synthase-subunit-alpha
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA
>LS483303.1|SQE44025.1|2128105_2129254_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>LS483303.1|SQE44026.1|2129544_2130756_-|major-facilitator-superfamily-protein
MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH
>LS483303.1|SQE44027.1|2130868_2131801_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRLVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
>LS483303.1|SQE44028.1|2131797_2132823_-|purine-nucleotide-synthesis-repressor
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>LS483303.1|SQE44029.1|2133376_2134546_+|major-facilitator-superfamily-protein
MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS
>LS483303.1|SQE44030.1|2134780_2135362_-|superoxide-dismutase
MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGELADAITASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA
>LS483303.1|SQE44031.1|2135489_2136305_-|putative-exported-hydrolase
MARINRISITLCALLFTTLPLTPMAHASKQARESSATTHITKKTDKKKSTATTKKTQKTAKKAASKSTTKSKTASSVKKSSITASKNAKTRSKHAVNKTASASFTEKCTKRKGYKSHCVKVKNAASGTLADAHKAKVQKATKVAMNKLMQQIGKPYLWGGSSPRTGFDCSGLVYYAYKDLVKIRIPRTANEMYHLRDAAPIERSELKNGDLVFFRTQGRGTADHVGVYVGNGKFIQSPRTGQEIQITSLSEDYWQRHYVGARRVMTPKTLR

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Crispr_ID: LS483303_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483303_6

2941039-2941244

Orphan

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRISPRCasFinder
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRT
TTTCTAAGCTGCCTGTACGGCAGTGAACG	PILER-CR

3 spacers

The CRISPR arrays of LS483303_6

>merge|LS483303|6|2941039-2941244|CRISPRCasFinder,CRT,PILER-CR
CATTTTATCTGTCTGTACGGCAGTGAACATGGTGGGTGGAGTATGTTACCTGTGAATTTCTAAGCTGCCTGTACGGCAGTGAACGCCAACTTTCACAGCCTTTGCAAGATTGTTCCTTTCTAAGCTGCCTGTACGGCAGTGAACGTTCGCTGCAACCGCTAGCCAAGACGGTAGGTTTTTCTAAGCTGCCTGTACGGCAGTGAACT

>LS483303|6|6|2941039-2941243|CRISPRCasFinder
CATTTTATCTGTCTGTACGGCAGTGAAC	ATGGTGGGTGGAGTATGTTACCTGTGAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCCAACTTTCACAGCCTTTGCAAGATTGTTCC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTCGCTGCAACCGCTAGCCAAGACGGTAGGTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>LS483303|6|3|2941039-2941243|CRT
CATTTTATCTGTCTGTACGGCAGTGAAC	ATGGTGGGTGGAGTATGTTACCTGTGAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCCAACTTTCACAGCCTTTGCAAGATTGTTCC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTCGCTGCAACCGCTAGCCAAGACGGTAGGTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>LS483303|6|3|2941095-2941244|PILER-CR
TTTCTAAGCTGCCTGTACGGCAGTGAACG	CCAACTTTCACAGCCTTTGCAAGATTGTTCC
TTTCTAAGCTGCCTGTACGGCAGTGAACG	TTCGCTGCAACCGCTAGCCAAGACGGTAGGTT
TTTCTAAGCTGCCTGTACGGCAGTGAACT

Protein	Signature genes	Signature genes Name	Protein_function
LS483303.1\|SQE44773.1\|2941454_2943731_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|236828
LS483303.1\|SQE44771.1\|2939446_2940151_+\|leucyl/phenylalanyl-tRNA-protein-transferase	unknown	unknown	gnl\|CDD\|234720
LS483303.1\|SQE44780.1\|2950947_2951643_+\|aquaporin-Z	unknown	unknown	gnl\|CDD\|235453
LS483303.1\|SQE44765.1\|2928900_2929512_-\|outer-membrane-lipoprotein-carrier-protein	unknown	unknown	gnl\|CDD\|129638
LS483303.1\|SQE44782.1\|2953142_2954795_+\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
LS483303.1\|SQE44769.1\|2935916_2937683_+\|ABC-transporter-ATP-binding-protein/permease	unknown	unknown	gnl\|CDD\|236870
LS483303.1\|SQE44779.1\|2948863_2950522_-\|nucleoside-triphosphate-hydrolase-domain	unknown	unknown	gnl\|CDD\|226121
LS483303.1\|SQE44777.1\|2946644_2947760_-\|macrolide-specific-efflux-protein	unknown	unknown	gnl\|CDD\|183211
LS483303.1\|SQE44772.1\|2940435_2940654_+\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
LS483303.1\|SQE44781.1\|2952099_2952999_+\|transporter	unknown	unknown	gnl\|CDD\|225287
LS483303.1\|SQE44764.1\|2927546_2928890_-\|putative-ATPase	unknown	unknown	gnl\|CDD\|237355
LS483303.1\|SQE44763.1\|2926163_2927456_-\|seryl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|235461
LS483303.1\|SQE44775.1\|2944404_2944629_+\|stationary-phase/starvation-inducible-regulatory-protein-CspD	unknown	unknown	gnl\|CDD\|77494
LS483303.1\|SQE44766.1\|2929666_2933449_-\|cell-division-protein-FtsK	unknown	unknown	gnl\|CDD\|236669
LS483303.1\|SQE44768.1\|2934828_2935794_+\|thioredoxin-reductase	unknown	unknown	gnl\|CDD\|182343
LS483303.1\|SQE44774.1\|2943761_2944082_-\|ATP-dependent-Clp-protease-adaptor-protein	unknown	unknown	gnl\|CDD\|178809
LS483303.1\|SQE44767.1\|2933789_2934284_-\|leucine-responsive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|183009
LS483303.1\|SQE44778.1\|2947874_2948867_+\|virulence-protein	unknown	unknown	gnl\|CDD\|225537
LS483303.1\|SQE44776.1\|2944701_2946648_-\|macrolide-export-ATP-binding/permease-protein	unknown	unknown	gnl\|CDD\|182528
LS483303.1\|SQE44770.1\|2937683_2939405_+\|ABC-transporter-ATP-binding-protein/permease	unknown	unknown	gnl\|CDD\|236865

Protein	Function_ID	Function_description	E-value
LS483303.1\|SQE44773.1\|2941454_2943731_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0
LS483303.1\|SQE44771.1\|2939446_2940151_+\|leucyl/phenylalanyl-tRNA-protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	3.45002e-139
LS483303.1\|SQE44780.1\|2950947_2951643_+\|aquaporin-Z	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	7.82992e-144
LS483303.1\|SQE44765.1\|2928900_2929512_-\|outer-membrane-lipoprotein-carrier-protein	gnl\|CDD\|129638	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA. This protein, LolA, is known so far only in the gamma and beta subdivisions of the Proteobacteria. The E. coli major outer lipoprotein (Lpp) of E. coli is released from the inner membrane as a complex with this chaperone in an energy-requiring process, and is then delivered to LolB for insertion into the outer membrane. LolA is involved in the delivery of lipoproteins generally, rather than just Lpp, and is an essential protein in E. coli, unlike Lpp itself. [Protein fate, Protein and peptide secretion and trafficking].	1.48786e-125
LS483303.1\|SQE44782.1\|2953142_2954795_+\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
LS483303.1\|SQE44769.1\|2935916_2937683_+\|ABC-transporter-ATP-binding-protein/permease	gnl\|CDD\|236870	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
LS483303.1\|SQE44779.1\|2948863_2950522_-\|nucleoside-triphosphate-hydrolase-domain	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
LS483303.1\|SQE44777.1\|2946644_2947760_-\|macrolide-specific-efflux-protein	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
LS483303.1\|SQE44772.1\|2940435_2940654_+\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	8.41354e-49
LS483303.1\|SQE44781.1\|2952099_2952999_+\|transporter	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	4.37433e-118
LS483303.1\|SQE44764.1\|2927546_2928890_-\|putative-ATPase	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
LS483303.1\|SQE44763.1\|2926163_2927456_-\|seryl-tRNA-synthetase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
LS483303.1\|SQE44775.1\|2944404_2944629_+\|stationary-phase/starvation-inducible-regulatory-protein-CspD	gnl\|CDD\|77494	PRK09937, PRK09937, cold shock-like protein CspD.	1.48016e-47
LS483303.1\|SQE44766.1\|2929666_2933449_-\|cell-division-protein-FtsK	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0
LS483303.1\|SQE44768.1\|2934828_2935794_+\|thioredoxin-reductase	gnl\|CDD\|182343	PRK10262, PRK10262, thioredoxin reductase; Provisional.	0
LS483303.1\|SQE44774.1\|2943761_2944082_-\|ATP-dependent-Clp-protease-adaptor-protein	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	2.48686e-49
LS483303.1\|SQE44767.1\|2933789_2934284_-\|leucine-responsive-transcriptional-regulator	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	5.32926e-117
LS483303.1\|SQE44778.1\|2947874_2948867_+\|virulence-protein	gnl\|CDD\|225537	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown].	1.19096e-132
LS483303.1\|SQE44776.1\|2944701_2946648_-\|macrolide-export-ATP-binding/permease-protein	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
LS483303.1\|SQE44770.1\|2937683_2939405_+\|ABC-transporter-ATP-binding-protein/permease	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0

>LS483303.1|SQE44772.1|2940435_2940654_+|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>LS483303.1|SQE44771.1|2939446_2940151_+|leucyl/phenylalanyl-tRNA-protein-transferase
MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLPNNFWVPRCLFSPQE
>LS483303.1|SQE44770.1|2937683_2939405_+|ABC-transporter-ATP-binding-protein/permease
MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTVGLSFLDFTLAFTLGGIMLLTLFLMPPLFYRAGKSAGQNMTHLRGQYRQQLTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRISDLTDQKPEVTFPDTQTRVADRVSLTLRDVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALSEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMREKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRYYQFKQGL
>LS483303.1|SQE44769.1|2935916_2937683_+|ABC-transporter-ATP-binding-protein/permease
MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWFMARILQHMIMENIPREALLLPFTLLVLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQVLDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFPSNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGELDFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAHPQRGEAELALTDPLTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDASEQELQAALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGQIIEQGRYAELSVTGGPFATLLAHRQEEI
>LS483303.1|SQE44768.1|2934828_2935794_+|thioredoxin-reductase
MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK
>LS483303.1|SQE44767.1|2933789_2934284_-|leucine-responsive-transcriptional-regulator
MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR
>LS483303.1|SQE44766.1|2929666_2933449_-|cell-division-protein-FtsK
MVGRYAVLYFWRDGLHHSVIIVGGCWFAWRHQSSDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYEDDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDEEITYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPAQPTVAWQPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNAEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQPQQPVPPQPQYQQPQQPVAPQPQYQQPQQPVAPQQQYQQPQQPVAPQQQYQQPQQPVAPQPQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD
>LS483303.1|SQE44765.1|2928900_2929512_-|outer-membrane-lipoprotein-carrier-protein
MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
>LS483303.1|SQE44764.1|2927546_2928890_-|putative-ATPase
MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR
>LS483303.1|SQE44763.1|2926163_2927456_-|seryl-tRNA-synthetase
MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG
>LS483303.1|SQE44773.1|2941454_2943731_-|ATP-dependent-Clp-protease-ATP-binding-subunit
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKAKNELTYGFQSAQKHKAEAAH
>LS483303.1|SQE44774.1|2943761_2944082_-|ATP-dependent-Clp-protease-adaptor-protein
MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
>LS483303.1|SQE44775.1|2944404_2944629_+|stationary-phase/starvation-inducible-regulatory-protein-CspD
MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVPVEVEAAVA
>LS483303.1|SQE44776.1|2944701_2946648_-|macrolide-export-ATP-binding/permease-protein
MTPLLELKDIRRSYPAGDEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAIEKVNVAGGTEPVVNTVSGWRQFVSGFNEALTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE
>LS483303.1|SQE44777.1|2946644_2947760_-|macrolide-specific-efflux-protein
MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ
>LS483303.1|SQE44778.1|2947874_2948867_+|virulence-protein
MVKSTSCITIDFMNMSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQKFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEALRYHYALLRGCMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLELTMMISMDKEGDSTILFRNSEGIPLAEITFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVMEAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWESVGGVCDAERHYRLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFRG
>LS483303.1|SQE44779.1|2948863_2950522_-|nucleoside-triphosphate-hydrolase-domain
MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRVAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD
>LS483303.1|SQE44780.1|2950947_2951643_+|aquaporin-Z
MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRN
>LS483303.1|SQE44781.1|2952099_2952999_+|transporter
MFSGLLIILVPLIVGYLIPLRQKAALKVINQLLSWMVYLILFFMGISLAFLDNLASNLLAILHYSAVSITVILLCNIAALMWLERGLPWRNHHQQEKLPSRIAMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQIVLNRRGMIVAVVVVASSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMVPAAIVHGFILSLLVPILIAFFSA
>LS483303.1|SQE44782.1|2953142_2954795_+|hydroxylamine-reductase
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVRHLDGDDFSAVITQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA

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Crispr_ID: LS483303_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483303_7

3061127-3061271

Orphan

Consensus_repeat	Method
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of LS483303_7

>merge|LS483303|7|3061127-3061271|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGCTGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTCGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

>LS483303|7|7|3061127-3061271|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	TGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTC
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

Protein	Signature genes	Signature genes Name	Protein_function
LS483303.1\|SQE44890.1\|3069050_3069740_-\|molybdenum-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|181841
LS483303.1\|SQE44882.1\|3059777_3061061_+\|acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
LS483303.1\|SQE44874.1\|3050411_3051320_+\|transferase-with-NAD(P)-binding-Rossmann-fold-domain;-UPF0052-family	unknown	unknown	gnl\|CDD\|211689
LS483303.1\|SQE44884.1\|3063738_3065043_-\|putative-Sodium:sulfate-symporter	unknown	unknown	gnl\|CDD\|279307
LS483303.1\|SQE44883.1\|3061294_3063556_-\|putative-aconitase	unknown	unknown	gnl\|CDD\|183125
LS483303.1\|SQE44880.1\|3057801_3059091_+\|adenosylmethionine-8-amino-7-oxononanoate-aminotransferase	unknown	unknown	gnl\|CDD\|181189
LS483303.1\|SQE44877.1\|3054781_3055537_-\|biotin-biosynthesis-protein-BioC	unknown	unknown	gnl\|CDD\|182340
LS483303.1\|SQE44881.1\|3059149_3059626_+\|putative-phosphatidylethanolamine-binding-protein	unknown	unknown	gnl\|CDD\|182339
LS483303.1\|SQE44888.1\|3067170_3067989_+\|Phosphotransferase	unknown	unknown	gnl\|CDD\|182523
LS483303.1\|SQE44875.1\|3051511_3053533_-\|UvrABC-system-protein-B-(excinuclease-ABC-subunit-B)	unknown	unknown	gnl\|CDD\|235395
LS483303.1\|SQE44873.1\|3048491_3049004_-\|molybdenum-cofactor-biosynthesis-protein-B	unknown	unknown	gnl\|CDD\|131715
LS483303.1\|SQE44879.1\|3056674_3057715_-\|biotin-synthetase	unknown	unknown	gnl\|CDD\|185063
LS483303.1\|SQE44887.1\|3066020_3067016_-\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|182912
LS483303.1\|SQE44889.1\|3067989_3069048_-\|molybdenum-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|182993
LS483303.1\|SQE44885.1\|3065141_3065357_-\|Insertion-element-protein	unknown	unknown	unknown
LS483303.1\|SQE44886.1\|3065512_3065806_+\|IS1-protein-InsB	unknown	unknown	gnl\|CDD\|281403
LS483303.1\|SQE44878.1\|3055523_3056678_-\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
LS483303.1\|SQE44876.1\|3054111_3054789_-\|dithiobiotin-synthetase	unknown	unknown	gnl\|CDD\|234625
LS483303.1\|SQE44891.1\|3069739_3070513_-\|molybdate-transporter-periplasmic-protein	unknown	unknown	gnl\|CDD\|182641
LS483303.1\|SQE44892.1\|3070679_3070829_-\|outer-membrane-or-exported-protein	unknown	unknown	gnl\|CDD\|371231

Protein	Function_ID	Function_description	E-value
LS483303.1\|SQE44890.1\|3069050_3069740_-\|molybdenum-ABC-transporter-permease	gnl\|CDD\|181841	PRK09421, modB, molybdate ABC transporter permease subunit.	2.41762e-146
LS483303.1\|SQE44882.1\|3059777_3061061_+\|acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
LS483303.1\|SQE44874.1\|3050411_3051320_+\|transferase-with-NAD(P)-binding-Rossmann-fold-domain;-UPF0052-family	gnl\|CDD\|211689	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam01933. [Hypothetical proteins, Conserved].	2.22556e-139
LS483303.1\|SQE44884.1\|3063738_3065043_-\|putative-Sodium:sulfate-symporter	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	1.56236e-176
LS483303.1\|SQE44883.1\|3061294_3063556_-\|putative-aconitase	gnl\|CDD\|183125	PRK11413, PRK11413, putative hydratase; Provisional.	0
LS483303.1\|SQE44880.1\|3057801_3059091_+\|adenosylmethionine-8-amino-7-oxononanoate-aminotransferase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
LS483303.1\|SQE44877.1\|3054781_3055537_-\|biotin-biosynthesis-protein-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	7.9121e-172
LS483303.1\|SQE44881.1\|3059149_3059626_+\|putative-phosphatidylethanolamine-binding-protein	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	9.34882e-118
LS483303.1\|SQE44888.1\|3067170_3067989_+\|Phosphotransferase	gnl\|CDD\|182523	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional.	0
LS483303.1\|SQE44875.1\|3051511_3053533_-\|UvrABC-system-protein-B-(excinuclease-ABC-subunit-B)	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
LS483303.1\|SQE44873.1\|3048491_3049004_-\|molybdenum-cofactor-biosynthesis-protein-B	gnl\|CDD\|131715	TIGR02667, Molybdenum_cofactor_biosynthesis_protein_B., molybdenum cofactor biosynthesis protein B, proteobacterial. This model represents the MoaB protein molybdopterin biosynthesis regions in Proteobacteria. This crystallized but incompletely characterized protein is thought to be involved in, though not required for, early steps in molybdopterin biosynthesis. It may bind a molybdopterin precursor. A distinctive conserved motif PCN near the C-terminus helps distinguish this clade from other homologs, including sets of proteins designated MogA. [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	1.65287e-105
LS483303.1\|SQE44879.1\|3056674_3057715_-\|biotin-synthetase	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
LS483303.1\|SQE44887.1\|3066020_3067016_-\|6-phosphogluconolactonase	gnl\|CDD\|182912	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional.	0
LS483303.1\|SQE44889.1\|3067989_3069048_-\|molybdenum-ABC-transporter-ATP-binding-protein	gnl\|CDD\|182993	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC.	0
LS483303.1\|SQE44886.1\|3065512_3065806_+\|IS1-protein-InsB	gnl\|CDD\|281403	pfam03400, DDE_Tnp_IS1, IS1 transposase. Transposase proteins are necessary for efficient DNA transposition. This family represents bacterial IS1 transposases.	8.42603e-54
LS483303.1\|SQE44878.1\|3055523_3056678_-\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
LS483303.1\|SQE44876.1\|3054111_3054789_-\|dithiobiotin-synthetase	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	3.39733e-110
LS483303.1\|SQE44891.1\|3069739_3070513_-\|molybdate-transporter-periplasmic-protein	gnl\|CDD\|182641	PRK10677, modA, molybdate transporter periplasmic protein; Provisional.	0
LS483303.1\|SQE44892.1\|3070679_3070829_-\|outer-membrane-or-exported-protein	gnl\|CDD\|371231	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ. AcrZ is associated with the AcrA-TolC multidrug efflux pump, it may enhance the ability of the pump to recognize and export certain substrates.	1.04381e-17

>LS483303.1|SQE44882.1|3059777_3061061_+|acyl-CoA-thioester-hydrolase
MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPILSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK
>LS483303.1|SQE44881.1|3059149_3059626_+|putative-phosphatidylethanolamine-binding-protein
MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLSQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMFS
>LS483303.1|SQE44880.1|3057801_3059091_+|adenosylmethionine-8-amino-7-oxononanoate-aminotransferase
MTTDDLAFDQRHIWHPYTSMTSPLPVYPVVSAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKMCDREGILLIADEIATGFGRTGKLFACEYAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAIIESGEWQQQVAAIEVQLREQLAPARDAEMVADVRVLGAIGVVETTRPVNMAALQKFFVEQGVWIRPFGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ
>LS483303.1|SQE44879.1|3056674_3057715_-|biotin-synthetase
MAHRPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMTPDTDEYYNAAAL
>LS483303.1|SQE44878.1|3055523_3056678_-|8-amino-7-oxononanoate-synthase
MSWQEKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG
>LS483303.1|SQE44877.1|3054781_3055537_-|biotin-biosynthesis-protein-BioC
MATVNKQAIAAAFGRAAAHYEQHADLQRQSADALLAMLPQRKYTHVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATATFDLAWSNLAVQWCGNLSTALRELYRVVRPKGVVAFTTLVQGSLPELHQAWQAVDERPHANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRILTRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE
>LS483303.1|SQE44876.1|3054111_3054789_-|dithiobiotin-synthetase
MSKRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPEGLRNSDALALQRNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTAQVIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGKYINLALL
>LS483303.1|SQE44875.1|3051511_3053533_-|UvrABC-system-protein-B-(excinuclease-ABC-subunit-B)
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
>LS483303.1|SQE44874.1|3050411_3051320_+|transferase-with-NAD(P)-binding-Rossmann-fold-domain;-UPF0052-family
MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTPIQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVLEASDIPYRHDRQLLHNALEKALQALG
>LS483303.1|SQE44873.1|3048491_3049004_-|molybdenum-cofactor-biosynthesis-protein-B
MSQVSTEFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREVEGFGEVFRMLSFEEIGTSTLQSRAVAGVANKTLIFAMPGSTKACRTAWENIIAPQLDARTRPCNFHPHLKK
>LS483303.1|SQE44883.1|3061294_3063556_-|putative-aconitase
MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFLGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVSALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVSRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFNKNRQM
>LS483303.1|SQE44884.1|3063738_3065043_-|putative-Sodium:sulfate-symporter
MGLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML
>LS483303.1|SQE44885.1|3065141_3065357_-|Insertion-element-protein
MAENRVEANAHNAGGCPASNAIHGHINDFLVRTGLRSGVSELQLPCFTAVRAEIALMSGSAFAVTHHPVSS
>LS483303.1|SQE44886.1|3065512_3065806_+|IS1-protein-InsB
MAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
>LS483303.1|SQE44887.1|3066020_3067016_-|6-phosphogluconolactonase
MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH
>LS483303.1|SQE44888.1|3067170_3067989_+|Phosphotransferase
MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVIKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI
>LS483303.1|SQE44889.1|3067989_3069048_-|molybdenum-ABC-transporter-ATP-binding-protein
MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAISGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMSKSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLDIPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWGSSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELAIKPGLWLYAQIKSVSITA
>LS483303.1|SQE44890.1|3069050_3069740_-|molybdenum-ABC-transporter-permease
MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGKALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEWLARISRERAGR
>LS483303.1|SQE44891.1|3069739_3070513_-|molybdate-transporter-periplasmic-protein
MARKWLNLFAGAALSFAVAGNALADEGKITVFAAASLTNAMQDIATQFKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQTLLGNSLVVVAPKASVQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKVEYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTIK
>LS483303.1|SQE44892.1|3070679_3070829_-|outer-membrane-or-exported-protein
MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQPGQNH

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Crispr_ID: LS483303_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483303_8

3308334-3308430

Orphan

Consensus_repeat	Method
TTGTAGGCCTGATAAGATGCGTCAAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of LS483303_8

>merge|LS483303|8|3308334-3308430|CRISPRCasFinder
TTGTAGGCCTGATAAGATGCGTCAAGCATCGCATCAGGCATTGTGCACCAATTGCCGGATGCGGCACCGGTTGTAGGCCTGATAAGACGCGTCAAGC

>LS483303|8|8|3308334-3308430|CRISPRCasFinder
TTGTAGGCCTGATAAGATGCGTCAAGC	ATCGCATCAGGCATTGTGCACCAATTGCCGGATGCGGCACCGG
TTGTAGGCCTGATAAGACGCGTCAAGC

Protein	Signature genes	Signature genes Name	Protein_function
LS483303.1\|SQE45101.1\|3303242_3303764_+\|putative-membrane-bound-metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|224899
LS483303.1\|SQE45103.1\|3305358_3305853_+\|peptidyl-prolyl-cis-trans-isomerase-B	unknown	unknown	gnl\|CDD\|182734
LS483303.1\|SQE45115.1\|3315532_3316516_+\|allantoate-amidohydrolase	unknown	unknown	gnl\|CDD\|274471
LS483303.1\|SQE45104.1\|3305855_3306578_+\|UDP-2,3-diacylglucosamine-hydrolase	unknown	unknown	gnl\|CDD\|235420
LS483303.1\|SQE45105.1\|3306695_3307205_+\|phosphoribosylaminoimidazole-carboxylase-catalytic-subunit	unknown	unknown	gnl\|CDD\|223119
LS483303.1\|SQE45116.1\|3316526_3317312_+\|putative-glyoxylate-utilization	unknown	unknown	gnl\|CDD\|225796
LS483303.1\|SQE45097.1\|3300129_3300822_-\|fimbrial-chaperone	unknown	unknown	gnl\|CDD\|185117
LS483303.1\|SQE45114.1\|3315214_3315430_+\|Insertion-element-protein	unknown	unknown	unknown
LS483303.1\|SQE45111.1\|3313432_3314482_+\|ureidoglycolate-dehydrogenase	unknown	unknown	gnl\|CDD\|184985
LS483303.1\|SQE45109.1\|3310179_3311439_-\|putative-cytoplasmic-protein	unknown	unknown	gnl\|CDD\|377673
LS483303.1\|SQE45112.1\|3314503_3314755_+\|allantoate-amidohydrolase	unknown	unknown	gnl\|CDD\|274471
LS483303.1\|SQE45102.1\|3303799_3305185_-\|cysteinyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|234705
LS483303.1\|SQE45108.1\|3309353_3310169_-\|putative-carboxylase	unknown	unknown	gnl\|CDD\|378658
LS483303.1\|SQE45110.1\|3311448_3313116_-\|FdrA-protein	unknown	unknown	gnl\|CDD\|180395
LS483303.1\|SQE45113.1\|3314765_3315059_-\|IS1-protein-InsB	unknown	unknown	gnl\|CDD\|281403
LS483303.1\|SQE45106.1\|3307201_3308269_+\|phosphoribosylaminoimidazole-carboxylase-ATPase-subunit	unknown	unknown	gnl\|CDD\|235674
LS483303.1\|SQE45107.1\|3308463_3309357_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|181831
LS483303.1\|SQE45099.1\|3302054_3302921_+\|5,10-methylene-tetrahydrofolate-dehydrogenase	unknown	unknown	gnl\|CDD\|236760
LS483303.1\|SQE45098.1\|3301041_3301584_-\|fimbrial-like-protein	unknown	unknown	gnl\|CDD\|237920
LS483303.1\|SQE45100.1\|3302922_3303135_+\|putative-RNA-binding-protein	unknown	unknown	gnl\|CDD\|183166

Protein	Function_ID	Function_description	E-value
LS483303.1\|SQE45101.1\|3303242_3303764_+\|putative-membrane-bound-metal-dependent-hydrolase	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	1.17059e-30
LS483303.1\|SQE45103.1\|3305358_3305853_+\|peptidyl-prolyl-cis-trans-isomerase-B	gnl\|CDD\|182734	PRK10791, PRK10791, peptidylprolyl isomerase B.	9.12357e-121
LS483303.1\|SQE45115.1\|3315532_3316516_+\|allantoate-amidohydrolase	gnl\|CDD\|274471	TIGR03176, AllC, allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea. [Central intermediary metabolism, Nitrogen metabolism].	0
LS483303.1\|SQE45104.1\|3305855_3306578_+\|UDP-2,3-diacylglucosamine-hydrolase	gnl\|CDD\|235420	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional.	1.25513e-165
LS483303.1\|SQE45105.1\|3306695_3307205_+\|phosphoribosylaminoimidazole-carboxylase-catalytic-subunit	gnl\|CDD\|223119	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism].	1.14024e-91
LS483303.1\|SQE45116.1\|3316526_3317312_+\|putative-glyoxylate-utilization	gnl\|CDD\|225796	COG3257, GlxB, Uncharacterized protein, possibly involved in glyoxylate utilization [General function prediction only].	1.36316e-150
LS483303.1\|SQE45097.1\|3300129_3300822_-\|fimbrial-chaperone	gnl\|CDD\|185117	PRK15195, PRK15195, molecular chaperone FimC.	4.51168e-149
LS483303.1\|SQE45111.1\|3313432_3314482_+\|ureidoglycolate-dehydrogenase	gnl\|CDD\|184985	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional.	0
LS483303.1\|SQE45109.1\|3310179_3311439_-\|putative-cytoplasmic-protein	gnl\|CDD\|377673	pfam06545, DUF1116, Protein of unknown function (DUF1116). This family contains hypothetical bacterial proteins of unknown function.	1.8369e-131
LS483303.1\|SQE45112.1\|3314503_3314755_+\|allantoate-amidohydrolase	gnl\|CDD\|274471	TIGR03176, AllC, allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea. [Central intermediary metabolism, Nitrogen metabolism].	5.63896e-47
LS483303.1\|SQE45102.1\|3303799_3305185_-\|cysteinyl-tRNA-synthetase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
LS483303.1\|SQE45108.1\|3309353_3310169_-\|putative-carboxylase	gnl\|CDD\|378658	pfam11392, DUF2877, Protein of unknown function (DUF2877). This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.	1.79982e-37
LS483303.1\|SQE45110.1\|3311448_3313116_-\|FdrA-protein	gnl\|CDD\|180395	PRK06091, PRK06091, membrane protein FdrA; Validated.	0
LS483303.1\|SQE45113.1\|3314765_3315059_-\|IS1-protein-InsB	gnl\|CDD\|281403	pfam03400, DDE_Tnp_IS1, IS1 transposase. Transposase proteins are necessary for efficient DNA transposition. This family represents bacterial IS1 transposases.	8.42603e-54
LS483303.1\|SQE45106.1\|3307201_3308269_+\|phosphoribosylaminoimidazole-carboxylase-ATPase-subunit	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	5.70382e-179
LS483303.1\|SQE45107.1\|3308463_3309357_-\|carbamate-kinase	gnl\|CDD\|181831	PRK09411, PRK09411, carbamate kinase; Reviewed.	0
LS483303.1\|SQE45099.1\|3302054_3302921_+\|5,10-methylene-tetrahydrofolate-dehydrogenase	gnl\|CDD\|236760	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	0
LS483303.1\|SQE45098.1\|3301041_3301584_-\|fimbrial-like-protein	gnl\|CDD\|237920	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA.	9.67411e-92
LS483303.1\|SQE45100.1\|3302922_3303135_+\|putative-RNA-binding-protein	gnl\|CDD\|183166	PRK11507, PRK11507, ribosome-associated protein YbcJ.	1.38756e-42

>LS483303.1|SQE45106.1|3307201_3308269_+|phosphoribosylaminoimidazole-carboxylase-ATPase-subunit
MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQSVITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAERSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRADETEQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNNPSVMINLIGSDANYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG
>LS483303.1|SQE45105.1|3306695_3307205_+|phosphoribosylaminoimidazole-carboxylase-catalytic-subunit
MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGAA
>LS483303.1|SQE45104.1|3305855_3306578_+|UDP-2,3-diacylglucosamine-hydrolase
MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
>LS483303.1|SQE45103.1|3305358_3305853_+|peptidyl-prolyl-cis-trans-isomerase-B
MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE
>LS483303.1|SQE45102.1|3303799_3305185_-|cysteinyl-tRNA-synthetase
MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK
>LS483303.1|SQE45101.1|3303242_3303764_+|putative-membrane-bound-metal-dependent-hydrolase
MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFNFGVAYGNVFGHRGFTHSLVFAFVVPLLCVLIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTAYGHQVIISELMWVWLPGMLLMGMLWWRRR
>LS483303.1|SQE45100.1|3302922_3303135_+|putative-RNA-binding-protein
MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA
>LS483303.1|SQE45099.1|3302054_3302921_+|5,10-methylene-tetrahydrofolate-dehydrogenase
MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQDE
>LS483303.1|SQE45098.1|3301041_3301584_-|fimbrial-like-protein
MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE
>LS483303.1|SQE45097.1|3300129_3300822_-|fimbrial-chaperone
MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVNSQIPLPSGVQGNLKFQTVNDYGSVTPVREVNLN
>LS483303.1|SQE45107.1|3308463_3309357_-|carbamate-kinase
MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPKVTAVSGYVRSRGKPAWIGALSRIEETLAGEAGTCISL
>LS483303.1|SQE45108.1|3309353_3310169_-|putative-carboxylase
MTIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFDPGGWMLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAAAWMQRAEETGLFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLLAAWYYGALDARSGRQFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP
>LS483303.1|SQE45109.1|3310179_3311439_-|putative-cytoplasmic-protein
MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNEGKTLLHAGPPMRWQEMTGPMKGACVGACLFEGWAKDEAQALAILEQGEVNFIPCHHVNAVGPMGGITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLSAALGRMERGIDLTAMMAQGITMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEVMDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFTAPVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAARAVSEEMAEIYLERNMQLQIPGWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQIGAGTVRAPLACFEQALEALAESMGIG
>LS483303.1|SQE45110.1|3311448_3313116_-|FdrA-protein
MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNDATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQALTQVRRWDSACQKLPDASLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKSRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAITPASSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHHHGMMLDADGHQIIDLGDDFYTVGRPHPMIDPALRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARSDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIRPLSPATQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ
>LS483303.1|SQE45111.1|3313432_3314482_+|ureidoglycolate-dehydrogenase
MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHGAVRVEYYAERISKGGTNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAQQKGVAVVGISRMGHSGAISYFVQQAARAGLIGISMCQSDPMVVPFGGAEIYYGTNPLAFAAPGEGDEVLTFDMATTVQAWGKVLDARSRNMSIPDTWAVDKNGAPTTDPFAVHALLPAAGPKGYGLMMMIDVLSGVLLGLPFGRQVSSMYDDLHAGRNLGQLHVVINPNFFSSSELFRQHLSQTMRELNAITPAPGFNQVYYPGQDQDIKQRKAAVEGIEIVDDIYQYLISDALYNTSYETKNPFAQ
>LS483303.1|SQE45112.1|3314503_3314755_+|allantoate-amidohydrolase
MITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIG
>LS483303.1|SQE45113.1|3314765_3315059_-|IS1-protein-InsB
MAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
>LS483303.1|SQE45114.1|3315214_3315430_+|Insertion-element-protein
MAENRVEANAHNAGGCPASNAIHGHINDFLVRTGLRSGVSELQLPCFTAVRAEIALMSGSAFAVTHHPVSS
>LS483303.1|SQE45115.1|3315532_3316516_+|allantoate-amidohydrolase
MVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPDAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSIEKAKKMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKDLVATLTELCESEKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQK
>LS483303.1|SQE45116.1|3316526_3317312_+|putative-glyoxylate-utilization
MGYLNNVTGYRDDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAHAEDSQIFLYKRRYVPIEGHAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI

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Crispr_ID: LS483303_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483303_9

3859205-3859346

Orphan

Consensus_repeat	Method
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of LS483303_9

>merge|LS483303|9|3859205-3859346|CRISPRCasFinder
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATAGCTGTCGGATGCGGCATAAACGCCTTATCCAACCCGGCTGGAGAGCAACCGTAAGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA

>LS483303|9|9|3859205-3859346|CRISPRCasFinder
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	TAGCTGTCGGATGCGGCATAAACGCCTTATCCAACCCG
GCTGGAGAGCAACCGTAAGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA

Protein	Signature genes	Signature genes Name	Protein_function
LS483303.1\|SQE45607.1\|3866843_3867794_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	unknown	unknown	gnl\|CDD\|234893
LS483303.1\|SQE45604.1\|3863271_3864420_-\|carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
LS483303.1\|SQE45602.1\|3859375_3859771_-\|transcriptional-activator	unknown	unknown	gnl\|CDD\|183154
LS483303.1\|SQE45610.1\|3868863_3871680_-\|isoleucyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|235588
LS483303.1\|SQE45603.1\|3860032_3863254_-\|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|235393
LS483303.1\|SQE45605.1\|3864875_3865697_-\|dihydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366
LS483303.1\|SQE45593.1\|3848480_3849767_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182273
LS483303.1\|SQE45599.1\|3856123_3857677_+\|crotonobetaine/carnitine-CoA-ligase	unknown	unknown	gnl\|CDD\|181195
LS483303.1\|SQE45609.1\|3868369_3868864_-\|lipoprotein-signal-peptidase	unknown	unknown	gnl\|CDD\|234739
LS483303.1\|SQE45606.1\|3865863_3866778_-\|nonspecific-ribonucleoside-hydrolase-(purine/pyrimidine-ribonucleoside-hydrolase)	unknown	unknown	gnl\|CDD\|182713
LS483303.1\|SQE45597.1\|3853561_3854704_+\|crotonobetainyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|179566
LS483303.1\|SQE45601.1\|3858576_3859167_+\|carnitine-operon-protein-CaiE	unknown	unknown	gnl\|CDD\|184189
LS483303.1\|SQE45611.1\|3871722_3872664_-\|riboflavin-biosynthesis-protein-[includes:-riboflavin-kinase;-FMN-adenylyltransferase]	unknown	unknown	gnl\|CDD\|235536
LS483303.1\|SQE45596.1\|3852016_3853531_+\|L-carnitine/gamma-butyrobetaine-antiporter	unknown	unknown	gnl\|CDD\|179568
LS483303.1\|SQE45608.1\|3867795_3868245_-\|FkbB-type-16-kD-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|237908
LS483303.1\|SQE45592.1\|3848196_3848484_-\|ferredoxin-like-protein	unknown	unknown	gnl\|CDD\|185346
LS483303.1\|SQE45598.1\|3854832_3856050_+\|crotonobetainyl-CoA:carnitine-CoA-transferase	unknown	unknown	gnl\|CDD\|179589
LS483303.1\|SQE45594.1\|3849817_3850759_-\|electron-transfer-flavoprotein-subunit-of-oxidoreductase	unknown	unknown	gnl\|CDD\|235120
LS483303.1\|SQE45600.1\|3857785_3858571_+\|carnitinyl-CoA-dehydratase	unknown	unknown	gnl\|CDD\|179599
LS483303.1\|SQE45595.1\|3850773_3851544_-\|electron-transfer-flavoprotein-FixA	unknown	unknown	gnl\|CDD\|179569

Protein	Function_ID	Function_description	E-value
LS483303.1\|SQE45607.1\|3866843_3867794_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	gnl\|CDD\|234893	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed.	0
LS483303.1\|SQE45604.1\|3863271_3864420_-\|carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
LS483303.1\|SQE45602.1\|3859375_3859771_-\|transcriptional-activator	gnl\|CDD\|183154	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF.	1.42176e-74
LS483303.1\|SQE45610.1\|3868863_3871680_-\|isoleucyl-tRNA-synthetase	gnl\|CDD\|235588	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
LS483303.1\|SQE45603.1\|3860032_3863254_-\|carbamoyl-phosphate-synthase-large-subunit	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
LS483303.1\|SQE45605.1\|3864875_3865697_-\|dihydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	1.09638e-141
LS483303.1\|SQE45593.1\|3848480_3849767_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182273	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional.	0
LS483303.1\|SQE45599.1\|3856123_3857677_+\|crotonobetaine/carnitine-CoA-ligase	gnl\|CDD\|181195	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated.	0
LS483303.1\|SQE45609.1\|3868369_3868864_-\|lipoprotein-signal-peptidase	gnl\|CDD\|234739	PRK00376, lspA, lipoprotein signal peptidase.	8.43095e-76
LS483303.1\|SQE45606.1\|3865863_3866778_-\|nonspecific-ribonucleoside-hydrolase-(purine/pyrimidine-ribonucleoside-hydrolase)	gnl\|CDD\|182713	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional.	0
LS483303.1\|SQE45597.1\|3853561_3854704_+\|crotonobetainyl-CoA-dehydrogenase	gnl\|CDD\|179566	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated.	0
LS483303.1\|SQE45601.1\|3858576_3859167_+\|carnitine-operon-protein-CaiE	gnl\|CDD\|184189	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional.	6.23334e-142
LS483303.1\|SQE45611.1\|3871722_3872664_-\|riboflavin-biosynthesis-protein-[includes:-riboflavin-kinase;-FMN-adenylyltransferase]	gnl\|CDD\|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	3.93114e-173
LS483303.1\|SQE45596.1\|3852016_3853531_+\|L-carnitine/gamma-butyrobetaine-antiporter	gnl\|CDD\|179568	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter.	0
LS483303.1\|SQE45608.1\|3867795_3868245_-\|FkbB-type-16-kD-peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|237908	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional.	1.55694e-104
LS483303.1\|SQE45592.1\|3848196_3848484_-\|ferredoxin-like-protein	gnl\|CDD\|185346	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional.	1.84173e-69
LS483303.1\|SQE45598.1\|3854832_3856050_+\|crotonobetainyl-CoA:carnitine-CoA-transferase	gnl\|CDD\|179589	PRK03525, PRK03525, L-carnitine CoA-transferase.	0
LS483303.1\|SQE45594.1\|3849817_3850759_-\|electron-transfer-flavoprotein-subunit-of-oxidoreductase	gnl\|CDD\|235120	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein.	0
LS483303.1\|SQE45600.1\|3857785_3858571_+\|carnitinyl-CoA-dehydratase	gnl\|CDD\|179599	PRK03580, PRK03580, crotonobetainyl-CoA hydratase.	5.82869e-179
LS483303.1\|SQE45595.1\|3850773_3851544_-\|electron-transfer-flavoprotein-FixA	gnl\|CDD\|179569	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed.	6.8619e-170

>LS483303.1|SQE45601.1|3858576_3859167_+|carnitine-operon-protein-CaiE
MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFSGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRYHASLHETQPLRQMEENRPRLQGTTDVTPKR
>LS483303.1|SQE45600.1|3857785_3858571_+|carnitinyl-CoA-dehydratase
MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR
>LS483303.1|SQE45599.1|3856123_3857677_+|crotonobetaine/carnitine-CoA-ligase
MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATVTECIPMMIRTLMVQPPSANDRQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNCPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK
>LS483303.1|SQE45598.1|3854832_3856050_+|crotonobetainyl-CoA:carnitine-CoA-transferase
MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKARETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED
>LS483303.1|SQE45597.1|3853561_3854704_+|crotonobetainyl-CoA-dehydrogenase
MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR
>LS483303.1|SQE45596.1|3852016_3853531_+|L-carnitine/gamma-butyrobetaine-antiporter
MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD
>LS483303.1|SQE45595.1|3850773_3851544_-|electron-transfer-flavoprotein-FixA
MKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI
>LS483303.1|SQE45594.1|3849817_3850759_-|electron-transfer-flavoprotein-subunit-of-oxidoreductase
MNTFSQVWVFSDTPSRLPELMNGAQALANQINAFVLNDADGAQAIQLGANHVWKLNGKPDDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR
>LS483303.1|SQE45593.1|3848480_3849767_-|FAD-dependent-oxidoreductase
MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFAESAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSEPELMRKKILRHGKKVGFINLIKDGMKGVTVL
>LS483303.1|SQE45592.1|3848196_3848484_-|ferredoxin-like-protein
MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG
>LS483303.1|SQE45602.1|3859375_3859771_-|transcriptional-activator
MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQKWQMMLSKSMRR
>LS483303.1|SQE45603.1|3860032_3863254_-|carbamoyl-phosphate-synthase-large-subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK
>LS483303.1|SQE45604.1|3863271_3864420_-|carbamoyl-phosphate-synthase-small-subunit
MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK
>LS483303.1|SQE45605.1|3864875_3865697_-|dihydrodipicolinate-reductase
MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNSL
>LS483303.1|SQE45606.1|3865863_3866778_-|nonspecific-ribonucleoside-hydrolase-(purine/pyrimidine-ribonucleoside-hydrolase)
MRLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEKTTRNALQLLHFWNAEIPLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRKPLGIPAFLAIRDALMRAPEPVTLVAIGPLTNIALLLSQCPECKPYIRRLVIMGGSAGRGNCTPNAEFNIAADPEAAACVFRSGIEIVMCGLDVTNQAILTPDYLSTLPQLNRTGKMLHALFSHYRSGSMQSGLRMHDLCAIAWLVRPDLFTLKPCFVAVETQGEFTSGTTVVDIDGCLGKPANVQVALDLDVKGFQQWVAEVLALAS
>LS483303.1|SQE45607.1|3866843_3867794_-|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase
MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHVGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD
>LS483303.1|SQE45608.1|3867795_3868245_-|FkbB-type-16-kD-peptidyl-prolyl-cis-trans-isomerase
MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQLLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA
>LS483303.1|SQE45609.1|3868369_3868864_-|lipoprotein-signal-peptidase
MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSKAKKQ
>LS483303.1|SQE45610.1|3868863_3871680_-|isoleucyl-tRNA-synthetase
MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAKFAVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKDLVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHTAPGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGALLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILNAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGLADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELAAKLTALGDELRFVLLTSGATVADYNDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTRDVGKVAEHAEICGRCVSNVAGDGEKRKFA
>LS483303.1|SQE45611.1|3871722_3872664_-|riboflavin-biosynthesis-protein-[includes:-riboflavin-kinase;-FMN-adenylyltransferase]
MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKLLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEGGVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	NZ_CP038506	Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence	11835-11866	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	NZ_CP019283	Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence	42147-42178	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	CP042641	Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence	36520-36551	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	NZ_CP034821	Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence	1557-1588	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	NZ_CP027443	Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence	9506-9537	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	NZ_CP027575	Escherichia coli strain 2013C-4081 plasmid unnamed2	94756-94787	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	NZ_CP027223	Escherichia coli strain 2015C-3101 plasmid unnamed2	65534-65565	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	NZ_CP030188	Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence	61916-61947	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	NZ_CP027590	Escherichia coli strain 2014C-3011 plasmid unnamed2	64165-64196	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	NZ_CP039862	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence	20286-20317	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	NZ_CP033632	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence	119284-119315	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	NZ_AP018798	Escherichia coli strain E2855 plasmid pE2855-2, complete sequence	85099-85130	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	CP012494	Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence	46688-46719	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	CP027320	Escherichia coli strain 2014C-3084 plasmid unnamed1	42116-42147	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	NC_013370	Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence	87237-87268	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	NZ_CP026475	Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence	81853-81884	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	MN510445	Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence	70500-70531	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	MN510447	Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence	47861-47892	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	NZ_CP012491	Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence	62997-63028	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	MH422554	Escherichia phage P1, complete genome	87194-87225	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	NC_050152	Enterobacteria phage P7, complete genome	93995-94026	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	MH445380	Escherichia virus P1 isolate transconjugant 2(L-II), complete genome	58645-58676	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	NC_031129	Salmonella phage SJ46, complete genome	77363-77394	0	1.0
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	MH445381	Escherichia virus P1, complete genome	56870-56901	0	1.0
LS483303_5	5.1\|2798692\|40\|LS483303\|CRISPRCasFinder	2798692-2798731	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	0	1.0
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	NZ_CP038506	Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence	11833-11866	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	CP042641	Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence	36518-36551	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	NZ_CP027443	Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence	9504-9537	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	NZ_CP027223	Escherichia coli strain 2015C-3101 plasmid unnamed2	65532-65565	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	NZ_CP027590	Escherichia coli strain 2014C-3011 plasmid unnamed2	64163-64196	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	NZ_CP033632	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence	119282-119315	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	NZ_AP018798	Escherichia coli strain E2855 plasmid pE2855-2, complete sequence	85097-85130	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	CP027320	Escherichia coli strain 2014C-3084 plasmid unnamed1	42114-42147	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	NC_013370	Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence	87235-87268	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	MN510445	Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence	70498-70531	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	NZ_CP012491	Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence	62995-63028	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	MH422554	Escherichia phage P1, complete genome	87192-87225	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	NC_050152	Enterobacteria phage P7, complete genome	93993-94026	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	MH445380	Escherichia virus P1 isolate transconjugant 2(L-II), complete genome	58643-58676	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	MH445381	Escherichia virus P1, complete genome	56868-56901	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	NZ_CP019283	Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence	42147-42180	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	NZ_CP034821	Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence	1557-1590	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	NZ_CP027575	Escherichia coli strain 2013C-4081 plasmid unnamed2	94756-94789	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	NZ_CP030188	Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence	61916-61949	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	NZ_CP039862	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence	20286-20319	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	CP012494	Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence	46688-46721	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	NZ_CP026475	Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence	81853-81886	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	MN510447	Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence	47861-47894	1	0.971
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	NC_031129	Salmonella phage SJ46, complete genome	77363-77396	1	0.971
LS483303_2	2.3\|977481\|32\|LS483303\|CRISPRCasFinder,CRT	977481-977512	32	AP012539	Stx2-converting phage Stx2a_WGPS6 proviral DNA, complete genome	19681-19712	2	0.938
LS483303_2	2.8\|977786\|32\|LS483303\|CRISPRCasFinder,CRT	977786-977817	32	NZ_CP023851	Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence	71166-71197	2	0.938
LS483303_2	2.8\|977786\|32\|LS483303\|CRISPRCasFinder,CRT	977786-977817	32	NZ_CP048306	Escherichia coli strain 9 plasmid p009_B, complete sequence	71579-71610	2	0.938
LS483303_2	2.8\|977786\|32\|LS483303\|CRISPRCasFinder,CRT	977786-977817	32	NZ_CP041423	Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence	57771-57802	2	0.938
LS483303_2	2.8\|977786\|32\|LS483303\|CRISPRCasFinder,CRT	977786-977817	32	NZ_CP019013	Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence	49237-49268	2	0.938
LS483303_2	2.8\|977786\|32\|LS483303\|CRISPRCasFinder,CRT	977786-977817	32	NZ_CP022167	Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence	80644-80675	2	0.938
LS483303_2	2.8\|977786\|32\|LS483303\|CRISPRCasFinder,CRT	977786-977817	32	NZ_CP019027	Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence	43940-43971	2	0.938
LS483303_2	2.8\|977786\|32\|LS483303\|CRISPRCasFinder,CRT	977786-977817	32	NZ_CP031136	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence	30387-30418	2	0.938
LS483303_2	2.8\|977786\|32\|LS483303\|CRISPRCasFinder,CRT	977786-977817	32	NZ_MH257954	Escherichia coli strain 104 plasmid pHXH-2, complete sequence	71853-71884	2	0.938
LS483303_2	2.8\|977786\|32\|LS483303\|CRISPRCasFinder,CRT	977786-977817	32	CP053388	Escherichia phage CMS-2020a, complete sequence	69160-69191	2	0.938
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	NZ_KP453775	Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence	17440-17471	2	0.938
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	NZ_CP017632	Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence	122310-122341	2	0.938
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	NZ_CP030285	Escherichia coli strain E308 plasmid pLKSZ04, complete sequence	6029-6060	2	0.938
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	NZ_CP036204	Escherichia coli strain L725 plasmid punnamed2, complete sequence	15121-15152	2	0.938
LS483303_2	2.9\|977847\|32\|LS483303\|CRISPRCasFinder,CRT	977847-977878	32	MN510446	Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence	131402-131433	2	0.938
LS483303_4	4.1\|2124145\|38\|LS483303\|CRISPRCasFinder	2124145-2124182	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
LS483303_1	1.54\|953932\|32\|LS483303\|CRISPRCasFinder,CRT	953932-953963	32	NZ_LR134258	Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence	3574-3605	3	0.906
LS483303_1	1.54\|953932\|32\|LS483303\|CRISPRCasFinder,CRT	953932-953963	32	LR134281	Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6	3567-3598	3	0.906
LS483303_1	1.54\|953932\|32\|LS483303\|CRISPRCasFinder,CRT	953932-953963	32	KY271401	Klebsiella phage 1 LV-2017, complete genome	21043-21074	3	0.906
LS483303_2	2.16\|977786\|34\|LS483303\|PILER-CR	977786-977819	34	NZ_CP041423	Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence	57769-57802	3	0.912
LS483303_2	2.16\|977786\|34\|LS483303\|PILER-CR	977786-977819	34	NZ_CP019013	Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence	49235-49268	3	0.912
LS483303_2	2.16\|977786\|34\|LS483303\|PILER-CR	977786-977819	34	NZ_CP031136	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence	30385-30418	3	0.912
LS483303_2	2.16\|977786\|34\|LS483303\|PILER-CR	977786-977819	34	NZ_CP023851	Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence	71166-71199	3	0.912
LS483303_2	2.16\|977786\|34\|LS483303\|PILER-CR	977786-977819	34	NZ_CP048306	Escherichia coli strain 9 plasmid p009_B, complete sequence	71579-71612	3	0.912
LS483303_2	2.16\|977786\|34\|LS483303\|PILER-CR	977786-977819	34	NZ_CP022167	Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence	80644-80677	3	0.912
LS483303_2	2.16\|977786\|34\|LS483303\|PILER-CR	977786-977819	34	NZ_CP019027	Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence	43940-43973	3	0.912
LS483303_2	2.16\|977786\|34\|LS483303\|PILER-CR	977786-977819	34	NZ_MH257954	Escherichia coli strain 104 plasmid pHXH-2, complete sequence	71853-71886	3	0.912
LS483303_2	2.16\|977786\|34\|LS483303\|PILER-CR	977786-977819	34	CP053388	Escherichia phage CMS-2020a, complete sequence	69160-69193	3	0.912
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	NZ_KP453775	Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence	17438-17471	3	0.912
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	NZ_CP017632	Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence	122308-122341	3	0.912
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	NZ_CP030285	Escherichia coli strain E308 plasmid pLKSZ04, complete sequence	6027-6060	3	0.912
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	MN510446	Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence	131400-131433	3	0.912
LS483303_2	2.17\|977847\|34\|LS483303\|PILER-CR	977847-977880	34	NZ_CP036204	Escherichia coli strain L725 plasmid punnamed2, complete sequence	15121-15154	3	0.912
LS483303_1	1.25\|953931\|33\|LS483303\|PILER-CR	953931-953963	33	NZ_LR134258	Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence	3574-3606	4	0.879
LS483303_1	1.25\|953931\|33\|LS483303\|PILER-CR	953931-953963	33	LR134281	Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6	3567-3599	4	0.879
LS483303_1	1.25\|953931\|33\|LS483303\|PILER-CR	953931-953963	33	KY271401	Klebsiella phage 1 LV-2017, complete genome	21043-21075	4	0.879
LS483303_2	2.11\|977481\|34\|LS483303\|PILER-CR	977481-977514	34	AP012539	Stx2-converting phage Stx2a_WGPS6 proviral DNA, complete genome	19679-19712	4	0.882
LS483303_1	1.54\|953932\|32\|LS483303\|CRISPRCasFinder,CRT	953932-953963	32	KY653119	Morganella phage IME1369_02, complete genome	18217-18248	5	0.844
LS483303_2	2.2\|977420\|32\|LS483303\|CRISPRCasFinder,CRT	977420-977451	32	MN340231	Escherichia phage phiv205-1, complete genome	27201-27232	5	0.844
LS483303_2	2.2\|977420\|32\|LS483303\|CRISPRCasFinder,CRT	977420-977451	32	NC_049952	Escherichia virus Lambda_2B8 genome assembly, chromosome: 1	47909-47940	5	0.844
LS483303_2	2.4\|977542\|32\|LS483303\|CRISPRCasFinder,CRT	977542-977573	32	NZ_CP011408	Vibrio parahaemolyticus strain FORC_014 plasmid pFORC14, complete sequence	35508-35539	5	0.844
LS483303_1	1.25\|953931\|33\|LS483303\|PILER-CR	953931-953963	33	KY653119	Morganella phage IME1369_02, complete genome	18216-18248	6	0.818
LS483303_1	1.34\|952710\|32\|LS483303\|CRISPRCasFinder,CRT	952710-952741	32	MN693675	Marine virus AFVG_250M630, complete genome	14302-14333	6	0.812
LS483303_1	1.34\|952710\|32\|LS483303\|CRISPRCasFinder,CRT	952710-952741	32	MN693578	Marine virus AFVG_25M520, complete genome	14539-14570	6	0.812
LS483303_2	2.4\|977542\|32\|LS483303\|CRISPRCasFinder,CRT	977542-977573	32	NZ_CP054046	Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence	31692-31723	6	0.812
LS483303_2	2.10\|977420\|34\|LS483303\|PILER-CR	977420-977453	34	MN340231	Escherichia phage phiv205-1, complete genome	27199-27232	6	0.824
LS483303_2	2.10\|977420\|34\|LS483303\|PILER-CR	977420-977453	34	NC_049952	Escherichia virus Lambda_2B8 genome assembly, chromosome: 1	47909-47942	6	0.824
LS483303_2	2.12\|977542\|34\|LS483303\|PILER-CR	977542-977575	34	NZ_CP011408	Vibrio parahaemolyticus strain FORC_014 plasmid pFORC14, complete sequence	35508-35541	6	0.824
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24789-24826	6	0.842
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24902-24939	6	0.842
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4073-4110	6	0.842
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4072-4109	6	0.842
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4072-4109	6	0.842
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4072-4109	6	0.842
LS483303_1	1.5\|952709\|33\|LS483303\|PILER-CR	952709-952741	33	MN693675	Marine virus AFVG_250M630, complete genome	14301-14333	7	0.788
LS483303_1	1.5\|952709\|33\|LS483303\|PILER-CR	952709-952741	33	MN693578	Marine virus AFVG_25M520, complete genome	14538-14570	7	0.788
LS483303_1	1.24\|953870\|33\|LS483303\|PILER-CR	953870-953902	33	AP018375	Staphylococcus phage phiSA039 DNA, complete genome	139799-139831	7	0.788
LS483303_1	1.39\|953016\|32\|LS483303\|CRISPRCasFinder,CRT	953016-953047	32	NZ_KX893538	Pseudomonas fluorescens strain PC20 plasmid pG20, complete sequence	92280-92311	7	0.781
LS483303_1	1.51\|953749\|32\|LS483303\|CRISPRCasFinder,CRT	953749-953780	32	NZ_CP023000	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence	869978-870009	7	0.781
LS483303_1	1.53\|953871\|32\|LS483303\|CRISPRCasFinder,CRT	953871-953902	32	AP018375	Staphylococcus phage phiSA039 DNA, complete genome	139800-139831	7	0.781
LS483303_1	1.55\|953993\|32\|LS483303\|CRISPRCasFinder,CRT	953993-954024	32	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755173-755204	7	0.781
LS483303_2	2.3\|977481\|32\|LS483303\|CRISPRCasFinder,CRT	977481-977512	32	NZ_CP044489	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-6, complete sequence	4987-5018	7	0.781
LS483303_2	2.3\|977481\|32\|LS483303\|CRISPRCasFinder,CRT	977481-977512	32	NZ_CP033122	Acinetobacter wuhouensis strain WCHAW010062 plasmid p2_010062, complete sequence	1726-1757	7	0.781
LS483303_2	2.5\|977603\|32\|LS483303\|CRISPRCasFinder,CRT	977603-977634	32	NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	897526-897557	7	0.781
LS483303_2	2.5\|977603\|32\|LS483303\|CRISPRCasFinder,CRT	977603-977634	32	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	585720-585751	7	0.781
LS483303_2	2.5\|977603\|32\|LS483303\|CRISPRCasFinder,CRT	977603-977634	32	NZ_CP021367	Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence	89866-89897	7	0.781
LS483303_2	2.5\|977603\|32\|LS483303\|CRISPRCasFinder,CRT	977603-977634	32	NZ_CP021649	Acidovorax sp. T1 plasmid p1-T1, complete sequence	97239-97270	7	0.781
LS483303_2	2.5\|977603\|32\|LS483303\|CRISPRCasFinder,CRT	977603-977634	32	NZ_CP021363	Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence	75914-75945	7	0.781
LS483303_1	1.22\|953748\|33\|LS483303\|PILER-CR	953748-953780	33	NZ_CP007257	Rhodococcus erythropolis R138 plasmid pLRE138, complete sequence	225677-225709	8	0.758
LS483303_1	1.26\|953992\|33\|LS483303\|PILER-CR	953992-954024	33	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755172-755204	8	0.758
LS483303_1	1.33\|952649\|32\|LS483303\|CRISPRCasFinder,CRT	952649-952680	32	NZ_CP042483	Klebsiella pneumoniae strain C51 plasmid pC51_002, complete sequence	203564-203595	8	0.75
LS483303_1	1.33\|952649\|32\|LS483303\|CRISPRCasFinder,CRT	952649-952680	32	NZ_CP020440	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence	52827-52858	8	0.75
LS483303_1	1.38\|952955\|32\|LS483303\|CRISPRCasFinder,CRT	952955-952986	32	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	822257-822288	8	0.75
LS483303_1	1.38\|952955\|32\|LS483303\|CRISPRCasFinder,CRT	952955-952986	32	CP037991	Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence	265054-265085	8	0.75
LS483303_1	1.39\|953016\|32\|LS483303\|CRISPRCasFinder,CRT	953016-953047	32	CP027478	Pseudomonas koreensis strain P19E3 plasmid p1, complete sequence	337384-337415	8	0.75
LS483303_1	1.39\|953016\|32\|LS483303\|CRISPRCasFinder,CRT	953016-953047	32	CP027479	Pseudomonas koreensis strain P19E3 plasmid p2, complete sequence	189914-189945	8	0.75
LS483303_1	1.43\|953260\|32\|LS483303\|CRISPRCasFinder,CRT	953260-953291	32	NZ_CP039728	Bacillus sp. S3 plasmid unnamed, complete sequence	184222-184253	8	0.75
LS483303_1	1.44\|953321\|32\|LS483303\|CRISPRCasFinder,CRT	953321-953352	32	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	647701-647732	8	0.75
LS483303_1	1.46\|953443\|32\|LS483303\|CRISPRCasFinder,CRT	953443-953474	32	CP022610	Escherichia coli strain ATCC 700415 plasmid unnamed, complete sequence	10541-10572	8	0.75
LS483303_1	1.51\|953749\|32\|LS483303\|CRISPRCasFinder,CRT	953749-953780	32	NZ_CP007257	Rhodococcus erythropolis R138 plasmid pLRE138, complete sequence	225678-225709	8	0.75
LS483303_1	1.51\|953749\|32\|LS483303\|CRISPRCasFinder,CRT	953749-953780	32	MH651189	Gordonia phage Schmidt, complete genome	29725-29756	8	0.75
LS483303_1	1.51\|953749\|32\|LS483303\|CRISPRCasFinder,CRT	953749-953780	32	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	166348-166379	8	0.75
LS483303_1	1.51\|953749\|32\|LS483303\|CRISPRCasFinder,CRT	953749-953780	32	NC_007762	Rhizobium etli CFN 42 plasmid p42a, complete sequence	188284-188315	8	0.75
LS483303_1	1.51\|953749\|32\|LS483303\|CRISPRCasFinder,CRT	953749-953780	32	NZ_CP034302	Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-3, complete sequence	75791-75822	8	0.75
LS483303_1	1.51\|953749\|32\|LS483303\|CRISPRCasFinder,CRT	953749-953780	32	NZ_CP021811	Sinorhizobium meliloti strain Rm41 plasmid accessoryA, complete sequence	86860-86891	8	0.75
LS483303_1	1.51\|953749\|32\|LS483303\|CRISPRCasFinder,CRT	953749-953780	32	NC_018682	Sinorhizobium meliloti Rm41 plasmid pRM41A, complete sequence	243882-243913	8	0.75
LS483303_1	1.52\|953810\|32\|LS483303\|CRISPRCasFinder,CRT	953810-953841	32	NZ_CP050083	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence	401491-401522	8	0.75
LS483303_1	1.52\|953810\|32\|LS483303\|CRISPRCasFinder,CRT	953810-953841	32	NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	704613-704644	8	0.75
LS483303_1	1.52\|953810\|32\|LS483303\|CRISPRCasFinder,CRT	953810-953841	32	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	845591-845622	8	0.75
LS483303_1	1.52\|953810\|32\|LS483303\|CRISPRCasFinder,CRT	953810-953841	32	NZ_CP049733	Rhizobium leguminosarum strain A1 plasmid pRL10, complete sequence	389166-389197	8	0.75
LS483303_1	1.52\|953810\|32\|LS483303\|CRISPRCasFinder,CRT	953810-953841	32	NZ_CP053440	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eF, complete sequence	775329-775360	8	0.75
LS483303_1	1.52\|953810\|32\|LS483303\|CRISPRCasFinder,CRT	953810-953841	32	NZ_CP053207	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence	418264-418295	8	0.75
LS483303_1	1.55\|953993\|32\|LS483303\|CRISPRCasFinder,CRT	953993-954024	32	NZ_CP007070	Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence	191920-191951	8	0.75
LS483303_1	1.58\|954176\|32\|LS483303\|CRISPRCasFinder,CRT	954176-954207	32	MK814759	Gordonia phage Reyja, complete genome	4467-4498	8	0.75
LS483303_2	2.1\|977359\|32\|LS483303\|CRISPRCasFinder,CRT	977359-977390	32	NZ_CP011869	Pseudonocardia sp. HH130629-09 plasmid pLS1-1, complete sequence	176963-176994	8	0.75
LS483303_2	2.3\|977481\|32\|LS483303\|CRISPRCasFinder,CRT	977481-977512	32	LC467982	Enterobacter cloacae complex sp. Keio CL MIC 0002 plasmid pKeio-CL-MIC-0002-3 DNA, complete sequence	63093-63124	8	0.75
LS483303_2	2.5\|977603\|32\|LS483303\|CRISPRCasFinder,CRT	977603-977634	32	NZ_CP011054	Halomonas sp. KO116 plasmid unnamed2, complete sequence	177867-177898	8	0.75
LS483303_2	2.6\|977664\|32\|LS483303\|CRISPRCasFinder,CRT	977664-977695	32	NZ_CP046399	Bacillus sp. A260 plasmid unnamed11, complete sequence	34220-34251	8	0.75
LS483303_2	2.6\|977664\|32\|LS483303\|CRISPRCasFinder,CRT	977664-977695	32	NZ_CP018742	Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence	13805-13836	8	0.75
LS483303_2	2.12\|977542\|34\|LS483303\|PILER-CR	977542-977575	34	NZ_CP054046	Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence	31692-31725	8	0.765
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3331-3368	8	0.789
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3330-3367	8	0.789
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3330-3367	8	0.789
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3330-3367	8	0.789
LS483303_1	1.4\|952648\|33\|LS483303\|PILER-CR	952648-952680	33	NZ_CP020440	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence	52826-52858	9	0.727
LS483303_1	1.7\|952831\|34\|LS483303\|PILER-CR	952831-952864	34	CP000617	Burkholderia vietnamiensis G4 plasmid pBVIE01, complete sequence	189338-189371	9	0.735
LS483303_1	1.17\|953442\|33\|LS483303\|PILER-CR	953442-953474	33	CP022610	Escherichia coli strain ATCC 700415 plasmid unnamed, complete sequence	10540-10572	9	0.727
LS483303_1	1.22\|953748\|33\|LS483303\|PILER-CR	953748-953780	33	MH651189	Gordonia phage Schmidt, complete genome	29725-29757	9	0.727
LS483303_1	1.23\|953809\|33\|LS483303\|PILER-CR	953809-953841	33	NZ_CP050083	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence	401491-401523	9	0.727
LS483303_1	1.23\|953809\|33\|LS483303\|PILER-CR	953809-953841	33	NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	704613-704645	9	0.727
LS483303_1	1.23\|953809\|33\|LS483303\|PILER-CR	953809-953841	33	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	845591-845623	9	0.727
LS483303_1	1.23\|953809\|33\|LS483303\|PILER-CR	953809-953841	33	NZ_CP049733	Rhizobium leguminosarum strain A1 plasmid pRL10, complete sequence	389166-389198	9	0.727
LS483303_1	1.23\|953809\|33\|LS483303\|PILER-CR	953809-953841	33	NZ_CP053440	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eF, complete sequence	775329-775361	9	0.727
LS483303_1	1.23\|953809\|33\|LS483303\|PILER-CR	953809-953841	33	NZ_CP053207	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence	418264-418296	9	0.727
LS483303_1	1.33\|952649\|32\|LS483303\|CRISPRCasFinder,CRT	952649-952680	32	NZ_CP033509	Mesorhizobium jarvisii strain ATCC 700743 plasmid pMJ700743b, complete sequence	2242-2273	9	0.719
LS483303_1	1.33\|952649\|32\|LS483303\|CRISPRCasFinder,CRT	952649-952680	32	NZ_CP033370	Mesorhizobium loti strain SU343 plasmid pMLSU343b, complete sequence	6520-6551	9	0.719
LS483303_1	1.33\|952649\|32\|LS483303\|CRISPRCasFinder,CRT	952649-952680	32	NZ_CP035181	Klebsiella pneumoniae strain BA33875 plasmid pBA33875_KPC2, complete sequence	37575-37606	9	0.719
LS483303_1	1.33\|952649\|32\|LS483303\|CRISPRCasFinder,CRT	952649-952680	32	NZ_CP007257	Rhodococcus erythropolis R138 plasmid pLRE138, complete sequence	14954-14985	9	0.719
LS483303_1	1.33\|952649\|32\|LS483303\|CRISPRCasFinder,CRT	952649-952680	32	NZ_CP022567	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK03, complete sequence	33848-33879	9	0.719
LS483303_1	1.34\|952710\|32\|LS483303\|CRISPRCasFinder,CRT	952710-952741	32	NZ_LT960613	Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600 plasmid P, complete sequence	10510-10541	9	0.719
LS483303_1	1.34\|952710\|32\|LS483303\|CRISPRCasFinder,CRT	952710-952741	32	NZ_CP018682	Vibrio harveyi isolate QT520 plasmid p1, complete sequence	47003-47034	9	0.719
LS483303_1	1.36\|952832\|33\|LS483303\|CRISPRCasFinder,CRT	952832-952864	33	CP000617	Burkholderia vietnamiensis G4 plasmid pBVIE01, complete sequence	189338-189370	9	0.727
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP037435	Lactobacillus plantarum strain EM plasmid pEM6, complete sequence	3042-3073	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP015858	Lactobacillus plantarum strain LZ227 plasmid LZ227p1, complete sequence	16081-16112	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP040857	Lactobacillus plantarum strain 202195 plasmid unnamed, complete sequence	41945-41976	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP021502	Lactobacillus plantarum strain SRCM102022 plasmid pPL2022-1, complete sequence	12929-12960	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP035175	Lactobacillus plantarum strain SRCM103426 plasmid unnamed1	30517-30548	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP035135	Lactobacillus plantarum strain SRCM103311 plasmid unnamed4	27893-27924	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP035148	Lactobacillus plantarum strain SRCM103361 plasmid unnamed1	68623-68654	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP032745	Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed1, complete sequence	66138-66169	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP016271	Lactobacillus plantarum subsp. plantarum strain CGMCC 1.557 plasmid pLp1, complete sequence	22368-22399	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP018325	Lactobacillus plantarum subsp. plantarum strain TS12 plasmid pLP12-1, complete sequence	1708-1739	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP035021	Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pA	15638-15669	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP035114	Lactobacillus plantarum strain SRCM103295 plasmid unnamed1	76727-76758	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP035115	Lactobacillus plantarum strain SRCM103295 plasmid unnamed2	10384-10415	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP046263	Lactobacillus plantarum strain KCCP11226 plasmid pKCCP11226_01, complete sequence	35228-35259	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP035567	Lactobacillus plantarum strain SRCM103300 plasmid unnamed1	42777-42808	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP012657	Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK01, complete sequence	13696-13727	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP017955	Lactobacillus plantarum strain C410L1 plasmid unnamed1, complete sequence	23171-23202	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP023176	Lactobacillus plantarum strain BDGP2 plasmid pLtBDGP2B, complete sequence	18976-19007	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP025417	Lactobacillus plantarum strain X7021 plasmid unnamed5, complete sequence	66390-66421	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NC_021519	Lactobacillus plantarum 16 plasmid Lp16H, complete sequence	35034-35065	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP046662	Lactobacillus plantarum strain 83-18 plasmid p83-18.2, complete sequence	49955-49986	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP035146	Lactobacillus plantarum strain SRCM103357 plasmid unnamed3	3599-3630	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP035146	Lactobacillus plantarum strain SRCM103357 plasmid unnamed3	64047-64078	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP028262	Lactobacillus plantarum strain SRCM102737 plasmid unnamed1, complete sequence	9071-9102	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP048024	Lactobacillus plantarum strain CACC 558 plasmid p2CACC558, complete sequence	38050-38081	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP040376	Lactobacillus plantarum subsp. plantarum strain BNH17 plasmid unnamed2, complete sequence	67968-67999	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP028223	Lactobacillus plantarum strain SRCM101105 plasmid unnamed1, complete sequence	10870-10901	9	0.719
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NZ_CP028278	Lactobacillus plantarum strain SRCM100995 plasmid unnamed3, complete sequence	44455-44486	9	0.719
LS483303_1	1.38\|952955\|32\|LS483303\|CRISPRCasFinder,CRT	952955-952986	32	NC_021623	Borrelia hermsii strain HS1 plasmid lp174, complete sequence	4388-4419	9	0.719
LS483303_1	1.38\|952955\|32\|LS483303\|CRISPRCasFinder,CRT	952955-952986	32	NZ_CP014350	Borrelia hermsii HS1 isolate Browne Mountain plasmid megaplasmid, complete sequence	4514-4545	9	0.719
LS483303_1	1.38\|952955\|32\|LS483303\|CRISPRCasFinder,CRT	952955-952986	32	MK250029	Prevotella phage Lak-C1, complete genome	109932-109963	9	0.719
LS483303_1	1.38\|952955\|32\|LS483303\|CRISPRCasFinder,CRT	952955-952986	32	MK250016	Prevotella phage Lak-A1, complete genome	149385-149416	9	0.719
LS483303_1	1.38\|952955\|32\|LS483303\|CRISPRCasFinder,CRT	952955-952986	32	MK250019	Prevotella phage Lak-A2, complete genome	72432-72463	9	0.719
LS483303_1	1.44\|953321\|32\|LS483303\|CRISPRCasFinder,CRT	953321-953352	32	NZ_LR134465	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence	208628-208659	9	0.719
LS483303_1	1.45\|953382\|32\|LS483303\|CRISPRCasFinder,CRT	953382-953413	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	4515488-4515519	9	0.719
LS483303_1	1.50\|953688\|32\|LS483303\|CRISPRCasFinder,CRT	953688-953719	32	KY744233	Sulfolobus islandicus rod-shaped virus 5, partial genome	27590-27621	9	0.719
LS483303_1	1.50\|953688\|32\|LS483303\|CRISPRCasFinder,CRT	953688-953719	32	KY744235	Sulfolobus islandicus rod-shaped virus 6, partial genome	26951-26982	9	0.719
LS483303_1	1.50\|953688\|32\|LS483303\|CRISPRCasFinder,CRT	953688-953719	32	KY744230	Sulfolobus islandicus rod-shaped virus 10, partial genome	25744-25775	9	0.719
LS483303_1	1.50\|953688\|32\|LS483303\|CRISPRCasFinder,CRT	953688-953719	32	KY744234	Sulfolobus islandicus rod-shaped virus 11, partial genome	25140-25171	9	0.719
LS483303_1	1.50\|953688\|32\|LS483303\|CRISPRCasFinder,CRT	953688-953719	32	KY744229	Sulfolobus islandicus rod-shaped virus 8, partial genome	28776-28807	9	0.719
LS483303_1	1.50\|953688\|32\|LS483303\|CRISPRCasFinder,CRT	953688-953719	32	KY744228	Sulfolobus islandicus rod-shaped virus 9, partial genome	27717-27748	9	0.719
LS483303_1	1.50\|953688\|32\|LS483303\|CRISPRCasFinder,CRT	953688-953719	32	KY744231	Sulfolobus islandicus rod-shaped virus 4, partial genome	26249-26280	9	0.719
LS483303_1	1.50\|953688\|32\|LS483303\|CRISPRCasFinder,CRT	953688-953719	32	KY744232	Sulfolobus islandicus rod-shaped virus 7, partial genome	26993-27024	9	0.719
LS483303_1	1.51\|953749\|32\|LS483303\|CRISPRCasFinder,CRT	953749-953780	32	NC_005128	Vibrio vulnificus YJ016 plasmid pYJ016, complete sequence	46387-46418	9	0.719
LS483303_1	1.51\|953749\|32\|LS483303\|CRISPRCasFinder,CRT	953749-953780	32	NZ_CP012741	Vibrio vulnificus strain FORC_017 plasmid unnamed, complete sequence	57062-57093	9	0.719
LS483303_1	1.52\|953810\|32\|LS483303\|CRISPRCasFinder,CRT	953810-953841	32	NZ_CP020950	Rhizobium sp. CIAT894 plasmid pRheCIAT894c, complete sequence	52168-52199	9	0.719
LS483303_2	2.6\|977664\|32\|LS483303\|CRISPRCasFinder,CRT	977664-977695	32	MT028491	Ochrobactrum phage vB_OspM_OC, complete genome	50790-50821	9	0.719
LS483303_2	2.8\|977786\|32\|LS483303\|CRISPRCasFinder,CRT	977786-977817	32	NZ_CP011009	Bacillus simplex strain SH-B26 plasmid pSHB26, complete sequence	147371-147402	9	0.719
LS483303_2	2.8\|977786\|32\|LS483303\|CRISPRCasFinder,CRT	977786-977817	32	MN693961	Marine virus AFVG_250M531, complete genome	39943-39974	9	0.719
LS483303_2	2.13\|977603\|34\|LS483303\|PILER-CR	977603-977636	34	NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	897526-897559	9	0.735
LS483303_2	2.13\|977603\|34\|LS483303\|PILER-CR	977603-977636	34	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	585718-585751	9	0.735
LS483303_2	2.13\|977603\|34\|LS483303\|PILER-CR	977603-977636	34	NZ_CP021367	Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence	89864-89897	9	0.735
LS483303_2	2.13\|977603\|34\|LS483303\|PILER-CR	977603-977636	34	NZ_CP021649	Acidovorax sp. T1 plasmid p1-T1, complete sequence	97237-97270	9	0.735
LS483303_2	2.13\|977603\|34\|LS483303\|PILER-CR	977603-977636	34	NZ_CP021363	Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence	75912-75945	9	0.735
LS483303_2	2.14\|977664\|34\|LS483303\|PILER-CR	977664-977697	34	NZ_CP046399	Bacillus sp. A260 plasmid unnamed11, complete sequence	34220-34253	9	0.735
LS483303_2	2.14\|977664\|34\|LS483303\|PILER-CR	977664-977697	34	NZ_CP018742	Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence	13803-13836	9	0.735
LS483303_6	6.3\|2941183\|33\|LS483303\|CRISPRCasFinder,CRT	2941183-2941215	33	MN855903	Myoviridae sp. isolate 490, partial genome	4171-4203	9	0.727
LS483303_6	6.5\|2941184\|32\|LS483303\|PILER-CR	2941184-2941215	32	MN855903	Myoviridae sp. isolate 490, partial genome	4171-4202	9	0.719
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14114-14151	9	0.763
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	51843-51880	9	0.763
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229388-229425	9	0.763
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239882-239919	9	0.763
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230794-230831	9	0.763
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211764-211801	9	0.763
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	40383-40420	9	0.763
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313601-313638	9	0.763
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	386517-386554	9	0.763
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	397090-397127	9	0.763
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	404135-404172	9	0.763
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	114998-115035	9	0.763
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40307-40344	9	0.763
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	MT230112	Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence	103-140	9	0.763
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31308-31345	9	0.763
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	8897-8934	9	0.763
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	17901-17938	9	0.763
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP037435	Lactobacillus plantarum strain EM plasmid pEM6, complete sequence	3042-3074	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP015858	Lactobacillus plantarum strain LZ227 plasmid LZ227p1, complete sequence	16080-16112	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP040857	Lactobacillus plantarum strain 202195 plasmid unnamed, complete sequence	41944-41976	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP021502	Lactobacillus plantarum strain SRCM102022 plasmid pPL2022-1, complete sequence	12928-12960	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP035175	Lactobacillus plantarum strain SRCM103426 plasmid unnamed1	30516-30548	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP035135	Lactobacillus plantarum strain SRCM103311 plasmid unnamed4	27893-27925	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP035148	Lactobacillus plantarum strain SRCM103361 plasmid unnamed1	68622-68654	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP032745	Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed1, complete sequence	66137-66169	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP016271	Lactobacillus plantarum subsp. plantarum strain CGMCC 1.557 plasmid pLp1, complete sequence	22367-22399	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP018325	Lactobacillus plantarum subsp. plantarum strain TS12 plasmid pLP12-1, complete sequence	1708-1740	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP035021	Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pA	15637-15669	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP035114	Lactobacillus plantarum strain SRCM103295 plasmid unnamed1	76726-76758	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP035115	Lactobacillus plantarum strain SRCM103295 plasmid unnamed2	10383-10415	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP046263	Lactobacillus plantarum strain KCCP11226 plasmid pKCCP11226_01, complete sequence	35227-35259	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP035567	Lactobacillus plantarum strain SRCM103300 plasmid unnamed1	42776-42808	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP012657	Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK01, complete sequence	13695-13727	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP017955	Lactobacillus plantarum strain C410L1 plasmid unnamed1, complete sequence	23171-23203	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP023176	Lactobacillus plantarum strain BDGP2 plasmid pLtBDGP2B, complete sequence	18976-19008	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP025417	Lactobacillus plantarum strain X7021 plasmid unnamed5, complete sequence	66390-66422	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NC_021519	Lactobacillus plantarum 16 plasmid Lp16H, complete sequence	35033-35065	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP046662	Lactobacillus plantarum strain 83-18 plasmid p83-18.2, complete sequence	49955-49987	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP035146	Lactobacillus plantarum strain SRCM103357 plasmid unnamed3	3599-3631	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP035146	Lactobacillus plantarum strain SRCM103357 plasmid unnamed3	64047-64079	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP028262	Lactobacillus plantarum strain SRCM102737 plasmid unnamed1, complete sequence	9071-9103	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP048024	Lactobacillus plantarum strain CACC 558 plasmid p2CACC558, complete sequence	38050-38082	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP040376	Lactobacillus plantarum subsp. plantarum strain BNH17 plasmid unnamed2, complete sequence	67967-67999	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP028223	Lactobacillus plantarum strain SRCM101105 plasmid unnamed1, complete sequence	10869-10901	10	0.697
LS483303_1	1.8\|952893\|33\|LS483303\|PILER-CR	952893-952925	33	NZ_CP028278	Lactobacillus plantarum strain SRCM100995 plasmid unnamed3, complete sequence	44454-44486	10	0.697
LS483303_1	1.22\|953748\|33\|LS483303\|PILER-CR	953748-953780	33	NZ_CP031081	Paracoccus yeei strain CCUG 32053 plasmid pYEE3, complete sequence	150698-150730	10	0.697
LS483303_1	1.22\|953748\|33\|LS483303\|PILER-CR	953748-953780	33	NZ_CP031084	Paracoccus yeei strain CCUG 32053 plasmid pYEE6, complete sequence	3458-3490	10	0.697
LS483303_1	1.22\|953748\|33\|LS483303\|PILER-CR	953748-953780	33	NZ_CP039905	Agrobacterium tumefaciens strain CFBP6623 plasmid pAtCFBP6623a, complete sequence	98771-98803	10	0.697
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	KT361653	Paenibacillus phage Paisley, complete genome	28717-28748	10	0.688
LS483303_1	1.37\|952894\|32\|LS483303\|CRISPRCasFinder,CRT	952894-952925	32	NC_028746	Paenibacillus phage Harrison, complete genome	28719-28750	10	0.688
LS483303_1	1.38\|952955\|32\|LS483303\|CRISPRCasFinder,CRT	952955-952986	32	NZ_CP041068	Bacillus megaterium strain KNU-01 plasmid pKNU_01_4, complete sequence	15222-15253	10	0.688
LS483303_1	1.38\|952955\|32\|LS483303\|CRISPRCasFinder,CRT	952955-952986	32	CP041516	Bacillus aryabhattai strain KNU10 plasmid unnamed, complete sequence	38867-38898	10	0.688
LS483303_1	1.38\|952955\|32\|LS483303\|CRISPRCasFinder,CRT	952955-952986	32	NC_019506	Clostridium phage phiCP13O, complete genome	20539-20570	10	0.688
LS483303_1	1.38\|952955\|32\|LS483303\|CRISPRCasFinder,CRT	952955-952986	32	NC_019508	Clostridium phage phiCP34O, complete genome	20153-20184	10	0.688
LS483303_1	1.38\|952955\|32\|LS483303\|CRISPRCasFinder,CRT	952955-952986	32	JF767208	Clostridium phage phi13O, complete genome	20539-20570	10	0.688
LS483303_1	1.38\|952955\|32\|LS483303\|CRISPRCasFinder,CRT	952955-952986	32	GQ443085	Clostridium phage CP26F, complete genome	20369-20400	10	0.688
LS483303_1	1.38\|952955\|32\|LS483303\|CRISPRCasFinder,CRT	952955-952986	32	JF767210	Clostridium phage phi9O, complete genome	20774-20805	10	0.688
LS483303_1	1.38\|952955\|32\|LS483303\|CRISPRCasFinder,CRT	952955-952986	32	JF767209	Clostridium phage phi34O, complete genome	20153-20184	10	0.688
LS483303_1	1.38\|952955\|32\|LS483303\|CRISPRCasFinder,CRT	952955-952986	32	NC_011318	Clostridium phage 39-O, complete genome	19873-19904	10	0.688
LS483303_1	1.38\|952955\|32\|LS483303\|CRISPRCasFinder,CRT	952955-952986	32	NC_019496	Clostridium phage phiCP26F, complete genome	20369-20400	10	0.688
LS483303_1	1.43\|953260\|32\|LS483303\|CRISPRCasFinder,CRT	953260-953291	32	NZ_KM406416	Bifidobacterium breve strain JCM 7017 plasmid megaplasmid pMP7017, complete sequence	35146-35177	10	0.688
LS483303_1	1.44\|953321\|32\|LS483303\|CRISPRCasFinder,CRT	953321-953352	32	NZ_CP011667	Streptomyces sp. Mg1 plasmid pSMg1-3, complete sequence	178017-178048	10	0.688
LS483303_1	1.44\|953321\|32\|LS483303\|CRISPRCasFinder,CRT	953321-953352	32	MN224564	Streptomyces phage Araceli, complete genome	8348-8379	10	0.688
LS483303_1	1.51\|953749\|32\|LS483303\|CRISPRCasFinder,CRT	953749-953780	32	NZ_CP039905	Agrobacterium tumefaciens strain CFBP6623 plasmid pAtCFBP6623a, complete sequence	98772-98803	10	0.688
LS483303_1	1.51\|953749\|32\|LS483303\|CRISPRCasFinder,CRT	953749-953780	32	NZ_CP031081	Paracoccus yeei strain CCUG 32053 plasmid pYEE3, complete sequence	150698-150729	10	0.688
LS483303_1	1.51\|953749\|32\|LS483303\|CRISPRCasFinder,CRT	953749-953780	32	NZ_CP031084	Paracoccus yeei strain CCUG 32053 plasmid pYEE6, complete sequence	3458-3489	10	0.688
LS483303_1	1.54\|953932\|32\|LS483303\|CRISPRCasFinder,CRT	953932-953963	32	MF158039	Shigella phage Sf12, complete genome	4975-5006	10	0.688
LS483303_1	1.54\|953932\|32\|LS483303\|CRISPRCasFinder,CRT	953932-953963	32	MF158042	Shigella phage Sd1, complete genome	938-969	10	0.688
LS483303_2	2.6\|977664\|32\|LS483303\|CRISPRCasFinder,CRT	977664-977695	32	NZ_CP020079	Vibrio campbellii strain 20130629003S01 plasmid pVCGX2, complete sequence	149847-149878	10	0.688
LS483303_2	2.6\|977664\|32\|LS483303\|CRISPRCasFinder,CRT	977664-977695	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	225034-225065	10	0.688
LS483303_2	2.6\|977664\|32\|LS483303\|CRISPRCasFinder,CRT	977664-977695	32	NZ_CP019295	Vibrio campbellii strain LMB29 plasmid pLMB157, complete sequence	148571-148602	10	0.688
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56040-56077	10	0.737
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_CP053046	Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence	58275-58312	10	0.737
LS483303_9	9.1\|3859257\|38\|LS483303\|CRISPRCasFinder	3859257-3859294	38	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	30215-30252	10	0.737
LS483303_1	1.25\|953931\|33\|LS483303\|PILER-CR	953931-953963	33	MF158039	Shigella phage Sf12, complete genome	4974-5006	11	0.667
LS483303_1	1.25\|953931\|33\|LS483303\|PILER-CR	953931-953963	33	MF158042	Shigella phage Sd1, complete genome	937-969	11	0.667

1. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

2. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

3. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

4. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

5. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

6. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

7. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

8. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

9. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP027590 (Escherichia coli strain 2014C-3011 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

10. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

11. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

12. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to NZ_AP018798 (Escherichia coli strain E2855 plasmid pE2855-2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

13. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

14. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

15. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

16. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

17. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to MN510445 (Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

18. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

19. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

20. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

21. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

22. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

23. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

24. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

25. spacer 5.1|2798692|40|LS483303|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

26. spacer 2.17|977847|34|LS483303|PILER-CR matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

27. spacer 2.17|977847|34|LS483303|PILER-CR matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

28. spacer 2.17|977847|34|LS483303|PILER-CR matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

29. spacer 2.17|977847|34|LS483303|PILER-CR matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

30. spacer 2.17|977847|34|LS483303|PILER-CR matches to NZ_CP027590 (Escherichia coli strain 2014C-3011 plasmid unnamed2) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

31. spacer 2.17|977847|34|LS483303|PILER-CR matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

32. spacer 2.17|977847|34|LS483303|PILER-CR matches to NZ_AP018798 (Escherichia coli strain E2855 plasmid pE2855-2, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

33. spacer 2.17|977847|34|LS483303|PILER-CR matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

34. spacer 2.17|977847|34|LS483303|PILER-CR matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

35. spacer 2.17|977847|34|LS483303|PILER-CR matches to MN510445 (Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

36. spacer 2.17|977847|34|LS483303|PILER-CR matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

37. spacer 2.17|977847|34|LS483303|PILER-CR matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

38. spacer 2.17|977847|34|LS483303|PILER-CR matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

39. spacer 2.17|977847|34|LS483303|PILER-CR matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

40. spacer 2.17|977847|34|LS483303|PILER-CR matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

41. spacer 2.17|977847|34|LS483303|PILER-CR matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

42. spacer 2.17|977847|34|LS483303|PILER-CR matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

43. spacer 2.17|977847|34|LS483303|PILER-CR matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

44. spacer 2.17|977847|34|LS483303|PILER-CR matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

45. spacer 2.17|977847|34|LS483303|PILER-CR matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

46. spacer 2.17|977847|34|LS483303|PILER-CR matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

47. spacer 2.17|977847|34|LS483303|PILER-CR matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

48. spacer 2.17|977847|34|LS483303|PILER-CR matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

49. spacer 2.17|977847|34|LS483303|PILER-CR matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

50. spacer 2.3|977481|32|LS483303|CRISPRCasFinder,CRT matches to AP012539 (Stx2-converting phage Stx2a_WGPS6 proviral DNA, complete genome) position: , mismatch: 2, identity: 0.938

tgttttcctgcaataaaacgacgctcgttacg	CRISPR spacer
tgttttcctgcaataaaacgacattcgttacg	Protospacer
**********************..********

51. spacer 2.8|977786|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP023851 (Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

52. spacer 2.8|977786|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

53. spacer 2.8|977786|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP041423 (Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

54. spacer 2.8|977786|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP019013 (Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

55. spacer 2.8|977786|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP022167 (Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

56. spacer 2.8|977786|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

57. spacer 2.8|977786|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP031136 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

58. spacer 2.8|977786|32|LS483303|CRISPRCasFinder,CRT matches to NZ_MH257954 (Escherichia coli strain 104 plasmid pHXH-2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

59. spacer 2.8|977786|32|LS483303|CRISPRCasFinder,CRT matches to CP053388 (Escherichia phage CMS-2020a, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

60. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

61. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

62. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP030285 (Escherichia coli strain E308 plasmid pLKSZ04, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

63. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP036204 (Escherichia coli strain L725 plasmid punnamed2, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

64. spacer 2.9|977847|32|LS483303|CRISPRCasFinder,CRT matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacgttatgaaccgacattcatgt	Protospacer
************ * *****************

65. spacer 4.1|2124145|38|LS483303|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

66. spacer 1.54|953932|32|LS483303|CRISPRCasFinder,CRT matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

67. spacer 1.54|953932|32|LS483303|CRISPRCasFinder,CRT matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

68. spacer 1.54|953932|32|LS483303|CRISPRCasFinder,CRT matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

69. spacer 2.16|977786|34|LS483303|PILER-CR matches to NZ_CP041423 (Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

70. spacer 2.16|977786|34|LS483303|PILER-CR matches to NZ_CP019013 (Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

71. spacer 2.16|977786|34|LS483303|PILER-CR matches to NZ_CP031136 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

72. spacer 2.16|977786|34|LS483303|PILER-CR matches to NZ_CP023851 (Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

73. spacer 2.16|977786|34|LS483303|PILER-CR matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

74. spacer 2.16|977786|34|LS483303|PILER-CR matches to NZ_CP022167 (Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

75. spacer 2.16|977786|34|LS483303|PILER-CR matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

76. spacer 2.16|977786|34|LS483303|PILER-CR matches to NZ_MH257954 (Escherichia coli strain 104 plasmid pHXH-2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

77. spacer 2.16|977786|34|LS483303|PILER-CR matches to CP053388 (Escherichia phage CMS-2020a, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

78. spacer 2.17|977847|34|LS483303|PILER-CR matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgttt	Protospacer
***.******** ******************* *

79. spacer 2.17|977847|34|LS483303|PILER-CR matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgttt	Protospacer
***.******** ******************* *

80. spacer 2.17|977847|34|LS483303|PILER-CR matches to NZ_CP030285 (Escherichia coli strain E308 plasmid pLKSZ04, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgttt	Protospacer
****************.***** ********* *

81. spacer 2.17|977847|34|LS483303|PILER-CR matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacgttatgaaccgacattcatgttt	Protospacer
************ * ***************** *

82. spacer 2.17|977847|34|LS483303|PILER-CR matches to NZ_CP036204 (Escherichia coli strain L725 plasmid punnamed2, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgttt	Protospacer
****************.***** ********* *

83. spacer 1.25|953931|33|LS483303|PILER-CR matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

84. spacer 1.25|953931|33|LS483303|PILER-CR matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

85. spacer 1.25|953931|33|LS483303|PILER-CR matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

86. spacer 2.11|977481|34|LS483303|PILER-CR matches to AP012539 (Stx2-converting phage Stx2a_WGPS6 proviral DNA, complete genome) position: , mismatch: 4, identity: 0.882

tgttttcctgcaataaaacgacgctcgttacgga	CRISPR spacer
tgttttcctgcaataaaacgacattcgttacgtt	Protospacer
**********************..********

87. spacer 1.54|953932|32|LS483303|CRISPRCasFinder,CRT matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 5, identity: 0.844

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggttgtgcggcgttaacgctgaccagcatttc	Protospacer
*  * ******.******** ***********

88. spacer 2.2|977420|32|LS483303|CRISPRCasFinder,CRT matches to MN340231 (Escherichia phage phiv205-1, complete genome) position: , mismatch: 5, identity: 0.844

tggctgagtacttcggcaaacgacacggcgat	CRISPR spacer
ttgccaagtacttcggcaagcgacacggtgat	Protospacer
* **..*************.********.***

89. spacer 2.2|977420|32|LS483303|CRISPRCasFinder,CRT matches to NC_049952 (Escherichia virus Lambda_2B8 genome assembly, chromosome: 1) position: , mismatch: 5, identity: 0.844

tggctgagtacttcggcaaacgacacggcgat	CRISPR spacer
ttgccaagtacttcggcaagcgacacggtgat	Protospacer
* **..*************.********.***

90. spacer 2.4|977542|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP011408 (Vibrio parahaemolyticus strain FORC_014 plasmid pFORC14, complete sequence) position: , mismatch: 5, identity: 0.844

agattggttttccagtctttggcggttggcaa	CRISPR spacer
agattggttttccagtctttcgcggtcggagt	Protospacer
******************** *****.** .

91. spacer 1.25|953931|33|LS483303|PILER-CR matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 6, identity: 0.818

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
aggttgtgcggcgttaacgctgaccagcatttc	Protospacer
 *  * ******.******** ***********

92. spacer 1.34|952710|32|LS483303|CRISPRCasFinder,CRT matches to MN693675 (Marine virus AFVG_250M630, complete genome) position: , mismatch: 6, identity: 0.812

-gtgcgccagctataaaaaactcaccatcaaca	CRISPR spacer
agtgt-ccagttataaaaaacccaccatcatta	Protospacer
 ***. ****.**********.******** .*

93. spacer 1.34|952710|32|LS483303|CRISPRCasFinder,CRT matches to MN693578 (Marine virus AFVG_25M520, complete genome) position: , mismatch: 6, identity: 0.812

-gtgcgccagctataaaaaactcaccatcaaca	CRISPR spacer
agtgt-ccagttataaaaaacccaccatcatta	Protospacer
 ***. ****.**********.******** .*

94. spacer 2.4|977542|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP054046 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

agattggttttccagtctttggcggttggcaa	CRISPR spacer
aagttggttttccagtctttggcggtcgggtt	Protospacer
*..***********************.**

95. spacer 2.10|977420|34|LS483303|PILER-CR matches to MN340231 (Escherichia phage phiv205-1, complete genome) position: , mismatch: 6, identity: 0.824

tggctgagtacttcggcaaacgacacggcgatga	CRISPR spacer
ttgccaagtacttcggcaagcgacacggtgatgt	Protospacer
* **..*************.********.****

96. spacer 2.10|977420|34|LS483303|PILER-CR matches to NC_049952 (Escherichia virus Lambda_2B8 genome assembly, chromosome: 1) position: , mismatch: 6, identity: 0.824

tggctgagtacttcggcaaacgacacggcgatga	CRISPR spacer
ttgccaagtacttcggcaagcgacacggtgatgt	Protospacer
* **..*************.********.****

97. spacer 2.12|977542|34|LS483303|PILER-CR matches to NZ_CP011408 (Vibrio parahaemolyticus strain FORC_014 plasmid pFORC14, complete sequence) position: , mismatch: 6, identity: 0.824

agattggttttccagtctttggcggttggcaagt	CRISPR spacer
agattggttttccagtctttcgcggtcggagtga	Protospacer
******************** *****.** . *

98. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttgatgtcggatgcggcgtaaacgccttatccgaccta	Protospacer
* * *************.**************.***..

99. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttgatgtcggatgcggcgtaaacgccttatccgaccta	Protospacer
* * *************.**************.***..

100. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

101. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

102. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

103. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

104. spacer 1.5|952709|33|LS483303|PILER-CR matches to MN693675 (Marine virus AFVG_250M630, complete genome) position: , mismatch: 7, identity: 0.788

-ggtgcgccagctataaaaaactcaccatcaaca	CRISPR spacer
aagtgt-ccagttataaaaaacccaccatcatta	Protospacer
 .***. ****.**********.******** .*

105. spacer 1.5|952709|33|LS483303|PILER-CR matches to MN693578 (Marine virus AFVG_25M520, complete genome) position: , mismatch: 7, identity: 0.788

-ggtgcgccagctataaaaaactcaccatcaaca	CRISPR spacer
aagtgt-ccagttataaaaaacccaccatcatta	Protospacer
 .***. ****.**********.******** .*

106. spacer 1.24|953870|33|LS483303|PILER-CR matches to AP018375 (Staphylococcus phage phiSA039 DNA, complete genome) position: , mismatch: 7, identity: 0.788

gagtcgaa--atgaggcgcgtgttctggaggatat	CRISPR spacer
--gtcagacgatgaggagcgtgttatggaggataa	Protospacer
  ***..*  ****** ******* *********

107. spacer 1.39|953016|32|LS483303|CRISPRCasFinder,CRT matches to NZ_KX893538 (Pseudomonas fluorescens strain PC20 plasmid pG20, complete sequence) position: , mismatch: 7, identity: 0.781

gcgtctcgagcgccggacgattcaaaaccagc	CRISPR spacer
acgattacagcgccggccgattcaaaaccagt	Protospacer
.** .*  ******** **************.

108. spacer 1.51|953749|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP023000 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence) position: , mismatch: 7, identity: 0.781

agatcgacatgagccgccgcgcgacgaataac	CRISPR spacer
agtcggccatgagcagccgagcgacgaatatc	Protospacer
** . * ******* **** ********** *

109. spacer 1.53|953871|32|LS483303|CRISPRCasFinder,CRT matches to AP018375 (Staphylococcus phage phiSA039 DNA, complete genome) position: , mismatch: 7, identity: 0.781

agtcgaa--atgaggcgcgtgttctggaggatat	CRISPR spacer
--tcagacgatgaggagcgtgttatggaggataa	Protospacer
  **..*  ****** ******* *********

110. spacer 1.55|953993|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

acgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
ccgtggtcgtgggtgctgctgttgctggagcg	Protospacer
 *******.**************** *.. *.

111. spacer 2.3|977481|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP044489 (Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-6, complete sequence) position: , mismatch: 7, identity: 0.781

tgttttcctgcaataaaacgacgct-cgttacg	CRISPR spacer
tatttttctgcaataaaacgacactatattat-	Protospacer
*.****.***************.** ..***.

112. spacer 2.3|977481|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP033122 (Acinetobacter wuhouensis strain WCHAW010062 plasmid p2_010062, complete sequence) position: , mismatch: 7, identity: 0.781

tgttttcctgcaataaaacgacgct-cgttacg	CRISPR spacer
tatttttctgcaataaaacgacactatattat-	Protospacer
*.****.***************.** ..***.

113. spacer 2.5|977603|32|LS483303|CRISPRCasFinder,CRT matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ttacgccggtatcccgctccctgttcagccga	Protospacer
.*..******* *** **************

114. spacer 2.5|977603|32|LS483303|CRISPRCasFinder,CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccc	Protospacer
**********.*** ********* *.. *.*

115. spacer 2.5|977603|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP021367 (Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccc	Protospacer
**********.*** ********* *.. *.*

116. spacer 2.5|977603|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP021649 (Acidovorax sp. T1 plasmid p1-T1, complete sequence) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccc	Protospacer
**********.*** ********* *.. *.*

117. spacer 2.5|977603|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP021363 (Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccc	Protospacer
**********.*** ********* *.. *.*

118. spacer 1.22|953748|33|LS483303|PILER-CR matches to NZ_CP007257 (Rhodococcus erythropolis R138 plasmid pLRE138, complete sequence) position: , mismatch: 8, identity: 0.758

gagatcgacatgagccgccgcgcgacgaataac	CRISPR spacer
gagatcgacatgatccgctgcgcgaccttggcc	Protospacer
************* ****.*******    . *

119. spacer 1.26|953992|33|LS483303|PILER-CR matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.758

gacgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
tccgtggtcgtgggtgctgctgttgctggagcg	Protospacer
  *******.**************** *.. *.

120. spacer 1.33|952649|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP042483 (Klebsiella pneumoniae strain C51 plasmid pC51_002, complete sequence) position: , mismatch: 8, identity: 0.75

tgatccgcgaccgccagatggcgcggcctgtc	CRISPR spacer
ttatccgcgaccgccaggcggcgcggggggat	Protospacer
* ***************..*******   * .

121. spacer 1.33|952649|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

tgatccgcgaccgccagatggcgcggcctgtc	CRISPR spacer
acccccgccagcgccagatggcgcggcccgcc	Protospacer
   .**** * *****************.*.*

122. spacer 1.38|952955|32|LS483303|CRISPRCasFinder,CRT matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 8, identity: 0.75

ccatgactataaaagcttatattttgataaat	CRISPR spacer
gcaggacaataaaagcttatatttggggatag	Protospacer
 ** *** **************** *. * *

123. spacer 1.38|952955|32|LS483303|CRISPRCasFinder,CRT matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ccatga-ctataaaagcttatattttgataaat	CRISPR spacer
-aataatctataaaaccttatatttttatatta	Protospacer
  **.* ******** ********** ***

124. spacer 1.39|953016|32|LS483303|CRISPRCasFinder,CRT matches to CP027478 (Pseudomonas koreensis strain P19E3 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgtctcgagcgccggacgattcaaaaccagc	CRISPR spacer
acgatcacagcgccggccgattcaaaaccagt	Protospacer
.** ..  ******** **************.

125. spacer 1.39|953016|32|LS483303|CRISPRCasFinder,CRT matches to CP027479 (Pseudomonas koreensis strain P19E3 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

gcgtctcgagcgccggacgattcaaaaccagc	CRISPR spacer
acgatcacagcgccggccgattcaaaaccagt	Protospacer
.** ..  ******** **************.

126. spacer 1.43|953260|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP039728 (Bacillus sp. S3 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gcgtccgtcaaagaggaagccaaagccatgca	CRISPR spacer
gctcatttgaacgaggaagccaaaaccatgca	Protospacer
** . . * ** ************.*******

127. spacer 1.44|953321|32|LS483303|CRISPRCasFinder,CRT matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 8, identity: 0.75

-gcgaccacgcagagcggcgacaacctgacgtt	CRISPR spacer
cttgatc-cgcagagcggcgacaacccggcggc	Protospacer
  .**.* ******************.*.** .

128. spacer 1.46|953443|32|LS483303|CRISPRCasFinder,CRT matches to CP022610 (Escherichia coli strain ATCC 700415 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

caaaaaaataatatccggcagtctgtacggta	CRISPR spacer
aagaaaaatcatatccggcagtctttagcgag	Protospacer
 *.****** ************** **  * .

129. spacer 1.51|953749|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP007257 (Rhodococcus erythropolis R138 plasmid pLRE138, complete sequence) position: , mismatch: 8, identity: 0.75

agatcgacatgagccgccgcgcgacgaataac	CRISPR spacer
agatcgacatgatccgctgcgcgaccttggcc	Protospacer
************ ****.*******    . *

130. spacer 1.51|953749|32|LS483303|CRISPRCasFinder,CRT matches to MH651189 (Gordonia phage Schmidt, complete genome) position: , mismatch: 8, identity: 0.75

agatcgacatgagccgccgcgcgacgaataac	CRISPR spacer
ctatcgccatcagccgccgcgcgacgtactcc	Protospacer
  **** *** *************** *.  *

131. spacer 1.51|953749|32|LS483303|CRISPRCasFinder,CRT matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 8, identity: 0.75

agatcgacatgagccgccgcgcgacgaataac	CRISPR spacer
gcaccgtcatgagccgctgcgcgacgaccgac	Protospacer
. *.** **********.********* ..**

132. spacer 1.51|953749|32|LS483303|CRISPRCasFinder,CRT matches to NC_007762 (Rhizobium etli CFN 42 plasmid p42a, complete sequence) position: , mismatch: 8, identity: 0.75

agatcgacatgagccgccgcgcgacgaataac--	CRISPR spacer
cgatgtacatgagccgccgcgcga--aatcgttc	Protospacer
 ***  ******************  *** ..

133. spacer 1.51|953749|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP034302 (Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-3, complete sequence) position: , mismatch: 8, identity: 0.75

agatcgacatgagccgccgcgcgacgaataac	CRISPR spacer
cgaagcccatgaggagccgcgcgacgaatacc	Protospacer
 **    ******  *************** *

134. spacer 1.51|953749|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP021811 (Sinorhizobium meliloti strain Rm41 plasmid accessoryA, complete sequence) position: , mismatch: 8, identity: 0.75

agatcgacatgagccgccgcgcgacgaataac--	CRISPR spacer
cgatatacatgagccgccgcgcga--aatcgttg	Protospacer
 ***  ******************  *** ..

135. spacer 1.51|953749|32|LS483303|CRISPRCasFinder,CRT matches to NC_018682 (Sinorhizobium meliloti Rm41 plasmid pRM41A, complete sequence) position: , mismatch: 8, identity: 0.75

agatcgacatgagccgccgcgcgacgaataac--	CRISPR spacer
cgatatacatgagccgccgcgcga--aatcgttg	Protospacer
 ***  ******************  *** ..

136. spacer 1.52|953810|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP050083 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence) position: , mismatch: 8, identity: 0.75

gactatcgcgggctgctgaaatcaaccggcga	CRISPR spacer
gcatcgcgcgggctgctgaaattgaccggctt	Protospacer
*  *  ****************..******

137. spacer 1.52|953810|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP050098 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence) position: , mismatch: 8, identity: 0.75

gactatcgcgggctgctgaaatcaaccggcga	CRISPR spacer
gcgtcgcgcgggctgctgaaattgaccggctt	Protospacer
*  *  ****************..******

138. spacer 1.52|953810|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 8, identity: 0.75

gactatcgcgggctgctgaaatcaaccggcga	CRISPR spacer
gcatcgcgcgggctgctgaaattgaccggctt	Protospacer
*  *  ****************..******

139. spacer 1.52|953810|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP049733 (Rhizobium leguminosarum strain A1 plasmid pRL10, complete sequence) position: , mismatch: 8, identity: 0.75

gactatcgcgggctgctgaaatcaaccggcga	CRISPR spacer
gcatcgcgcgggctgctgaaattgaccggctt	Protospacer
*  *  ****************..******

140. spacer 1.52|953810|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP053440 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eF, complete sequence) position: , mismatch: 8, identity: 0.75

gactatcgcgggctgctgaaatcaaccggcga	CRISPR spacer
gcgtcgcgcgggctgctgaaattgaccggctt	Protospacer
*  *  ****************..******

141. spacer 1.52|953810|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP053207 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence) position: , mismatch: 8, identity: 0.75

gactatcgcgggctgctgaaatcaaccggcga	CRISPR spacer
gcatcgcgcgggctgctgaaattgaccggctt	Protospacer
*  *  ****************..******

142. spacer 1.55|953993|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP007070 (Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

acgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
atgcggtcatggatgctgatgttgcagtgatg	Protospacer
*.*.********.***** ******** * ..

143. spacer 1.58|954176|32|LS483303|CRISPRCasFinder,CRT matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75

gagcctgacgagactactgaggccgttctgtc-	CRISPR spacer
aagcctgacgaggctactggggcca-gcggtgg	Protospacer
.***********.******.****.  * **

144. spacer 2.1|977359|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP011869 (Pseudonocardia sp. HH130629-09 plasmid pLS1-1, complete sequence) position: , mismatch: 8, identity: 0.75

aatggccgggtggtgatgggttcccgttcact	CRISPR spacer
gacggccgggtggtgatggagtcccgcgccca	Protospacer
.*.****************. *****. * *

145. spacer 2.3|977481|32|LS483303|CRISPRCasFinder,CRT matches to LC467982 (Enterobacter cloacae complex sp. Keio CL MIC 0002 plasmid pKeio-CL-MIC-0002-3 DNA, complete sequence) position: , mismatch: 8, identity: 0.75

tgttttcctgcaataaaacgacgctcgttacg	CRISPR spacer
cgctttccagcaataaaaagacgctcataaga	Protospacer
.*.***** ********* *******.* * .

146. spacer 2.5|977603|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP011054 (Halomonas sp. KO116 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ctgtgc---cggtagccccctccctgttcagcctc	CRISPR spacer
---tgcgagcggtaacccccaccctgttcagctct	Protospacer
   ***   *****.***** ***********...

147. spacer 2.6|977664|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP046399 (Bacillus sp. A260 plasmid unnamed11, complete sequence) position: , mismatch: 8, identity: 0.75

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
taatttagaggtgtttattcaaaatcatcttc	Protospacer
*. *******.*** ************  *

148. spacer 2.6|977664|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP018742 (Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence) position: , mismatch: 8, identity: 0.75

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
taatttagaggtgtttattcaaaatcatcttc	Protospacer
*. *******.*** ************  *

149. spacer 2.12|977542|34|LS483303|PILER-CR matches to NZ_CP054046 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

agattggttttccagtctttggcggttggcaagt	CRISPR spacer
aagttggttttccagtctttggcggtcgggttaa	Protospacer
*..***********************.**   .

150. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

151. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

152. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

153. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

154. spacer 1.4|952648|33|LS483303|PILER-CR matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

ttgatccgcgaccgccagatggcgcggcctgtc	CRISPR spacer
gacccccgccagcgccagatggcgcggcccgcc	Protospacer
    .**** * *****************.*.*

155. spacer 1.7|952831|34|LS483303|PILER-CR matches to CP000617 (Burkholderia vietnamiensis G4 plasmid pBVIE01, complete sequence) position: , mismatch: 9, identity: 0.735

ggatatggcaatgagtaaatatacatatttaaac-------	CRISPR spacer
ggatctggcaatgagcaaatatac-------aacggggttc	Protospacer
**** **********.********       ***

156. spacer 1.17|953442|33|LS483303|PILER-CR matches to CP022610 (Escherichia coli strain ATCC 700415 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

gcaaaaaaataatatccggcagtctgtacggta	CRISPR spacer
taagaaaaatcatatccggcagtctttagcgag	Protospacer
  *.****** ************** **  * .

157. spacer 1.22|953748|33|LS483303|PILER-CR matches to MH651189 (Gordonia phage Schmidt, complete genome) position: , mismatch: 9, identity: 0.727

gagatcgacatgagccgccgcgcgacgaataac	CRISPR spacer
tctatcgccatcagccgccgcgcgacgtactcc	Protospacer
   **** *** *************** *.  *

158. spacer 1.23|953809|33|LS483303|PILER-CR matches to NZ_CP050083 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence) position: , mismatch: 9, identity: 0.727

ggactatcgcgggctgctgaaatcaaccggcga	CRISPR spacer
cgcatcgcgcgggctgctgaaattgaccggctt	Protospacer
 *  *  ****************..******

159. spacer 1.23|953809|33|LS483303|PILER-CR matches to NZ_CP050098 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence) position: , mismatch: 9, identity: 0.727

ggactatcgcgggctgctgaaatcaaccggcga	CRISPR spacer
cgcgtcgcgcgggctgctgaaattgaccggctt	Protospacer
 *  *  ****************..******

160. spacer 1.23|953809|33|LS483303|PILER-CR matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 9, identity: 0.727

ggactatcgcgggctgctgaaatcaaccggcga	CRISPR spacer
cgcatcgcgcgggctgctgaaattgaccggctt	Protospacer
 *  *  ****************..******

161. spacer 1.23|953809|33|LS483303|PILER-CR matches to NZ_CP049733 (Rhizobium leguminosarum strain A1 plasmid pRL10, complete sequence) position: , mismatch: 9, identity: 0.727

ggactatcgcgggctgctgaaatcaaccggcga	CRISPR spacer
cgcatcgcgcgggctgctgaaattgaccggctt	Protospacer
 *  *  ****************..******

162. spacer 1.23|953809|33|LS483303|PILER-CR matches to NZ_CP053440 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eF, complete sequence) position: , mismatch: 9, identity: 0.727

ggactatcgcgggctgctgaaatcaaccggcga	CRISPR spacer
cgcgtcgcgcgggctgctgaaattgaccggctt	Protospacer
 *  *  ****************..******

163. spacer 1.23|953809|33|LS483303|PILER-CR matches to NZ_CP053207 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence) position: , mismatch: 9, identity: 0.727

ggactatcgcgggctgctgaaatcaaccggcga	CRISPR spacer
cgcatcgcgcgggctgctgaaattgaccggctt	Protospacer
 *  *  ****************..******

164. spacer 1.33|952649|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP033509 (Mesorhizobium jarvisii strain ATCC 700743 plasmid pMJ700743b, complete sequence) position: , mismatch: 9, identity: 0.719

tgatccgcgaccgccagatggcgcggcctgtc	CRISPR spacer
gtccccgcgcacgccagatggcgcggcagggc	Protospacer
   .*****  ****************  * *

165. spacer 1.33|952649|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP033370 (Mesorhizobium loti strain SU343 plasmid pMLSU343b, complete sequence) position: , mismatch: 9, identity: 0.719

tgatccgcgaccgccagatggcgcggcctgtc	CRISPR spacer
gtccccgcgcacgccagatggcgcggcagggc	Protospacer
   .*****  ****************  * *

166. spacer 1.33|952649|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP035181 (Klebsiella pneumoniae strain BA33875 plasmid pBA33875_KPC2, complete sequence) position: , mismatch: 9, identity: 0.719

tgatccgcgaccgccagatggcgcggcctgtc	CRISPR spacer
ttttccgcgaccgccaggcggcgcgggggatg	Protospacer
*  **************..*******   .*

167. spacer 1.33|952649|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP007257 (Rhodococcus erythropolis R138 plasmid pLRE138, complete sequence) position: , mismatch: 9, identity: 0.719

tgatccgcgaccgccagatggcgcggcctgtc	CRISPR spacer
tgatccgcgacggccggatggcgggaaacaac	Protospacer
*********** ***.******* *.  .. *

168. spacer 1.33|952649|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP022567 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK03, complete sequence) position: , mismatch: 9, identity: 0.719

tgatccgcgaccgccagatggcgcggcctgtc	CRISPR spacer
tcatgcgcgaccggcagatggcgcgaacccga	Protospacer
* ** ******** ***********. *.

169. spacer 1.34|952710|32|LS483303|CRISPRCasFinder,CRT matches to NZ_LT960613 (Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600 plasmid P, complete sequence) position: , mismatch: 9, identity: 0.719

gtgcgccagctataaaaaactcaccatcaaca	CRISPR spacer
aggcgccagctacaaaaagctcaccttgagtt	Protospacer
. **********.*****.****** * *..

170. spacer 1.34|952710|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP018682 (Vibrio harveyi isolate QT520 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

gtgcgccagctataaaaaactcaccatcaaca	CRISPR spacer
aggctccagctacaaaaaactcaccttgagtt	Protospacer
. ** *******.************ * *..

171. spacer 1.36|952832|33|LS483303|CRISPRCasFinder,CRT matches to CP000617 (Burkholderia vietnamiensis G4 plasmid pBVIE01, complete sequence) position: , mismatch: 9, identity: 0.727

gatatggcaatgagtaaatatacatatttaaac-------	CRISPR spacer
gatctggcaatgagcaaatatac-------aacggggttc	Protospacer
*** **********.********       ***

172. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP037435 (Lactobacillus plantarum strain EM plasmid pEM6, complete sequence) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

173. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP015858 (Lactobacillus plantarum strain LZ227 plasmid LZ227p1, complete sequence) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

174. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP040857 (Lactobacillus plantarum strain 202195 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

175. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP021502 (Lactobacillus plantarum strain SRCM102022 plasmid pPL2022-1, complete sequence) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

176. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP035175 (Lactobacillus plantarum strain SRCM103426 plasmid unnamed1) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

177. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP035135 (Lactobacillus plantarum strain SRCM103311 plasmid unnamed4) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

178. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP035148 (Lactobacillus plantarum strain SRCM103361 plasmid unnamed1) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

179. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP032745 (Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

180. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP016271 (Lactobacillus plantarum subsp. plantarum strain CGMCC 1.557 plasmid pLp1, complete sequence) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

181. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP018325 (Lactobacillus plantarum subsp. plantarum strain TS12 plasmid pLP12-1, complete sequence) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

182. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP035021 (Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pA) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

183. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP035114 (Lactobacillus plantarum strain SRCM103295 plasmid unnamed1) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

184. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP035115 (Lactobacillus plantarum strain SRCM103295 plasmid unnamed2) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

185. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP046263 (Lactobacillus plantarum strain KCCP11226 plasmid pKCCP11226_01, complete sequence) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

186. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP035567 (Lactobacillus plantarum strain SRCM103300 plasmid unnamed1) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

187. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP012657 (Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK01, complete sequence) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

188. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP017955 (Lactobacillus plantarum strain C410L1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

189. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP023176 (Lactobacillus plantarum strain BDGP2 plasmid pLtBDGP2B, complete sequence) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

190. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP025417 (Lactobacillus plantarum strain X7021 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

191. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NC_021519 (Lactobacillus plantarum 16 plasmid Lp16H, complete sequence) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

192. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP046662 (Lactobacillus plantarum strain 83-18 plasmid p83-18.2, complete sequence) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

193. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP035146 (Lactobacillus plantarum strain SRCM103357 plasmid unnamed3) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

194. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP035146 (Lactobacillus plantarum strain SRCM103357 plasmid unnamed3) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

195. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP028262 (Lactobacillus plantarum strain SRCM102737 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

196. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP048024 (Lactobacillus plantarum strain CACC 558 plasmid p2CACC558, complete sequence) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

197. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP040376 (Lactobacillus plantarum subsp. plantarum strain BNH17 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

198. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP028223 (Lactobacillus plantarum strain SRCM101105 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

199. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP028278 (Lactobacillus plantarum strain SRCM100995 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
agcccctgccgcctcttttgaataattttttg	Protospacer
* *******  ***************. .

200. spacer 1.38|952955|32|LS483303|CRISPRCasFinder,CRT matches to NC_021623 (Borrelia hermsii strain HS1 plasmid lp174, complete sequence) position: , mismatch: 9, identity: 0.719

ccatgactataaaagcttatattttgataaat	CRISPR spacer
tgaggcagataaaagcttatatttggctaaag	Protospacer
. * *   **************** * ****

201. spacer 1.38|952955|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP014350 (Borrelia hermsii HS1 isolate Browne Mountain plasmid megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ccatgactataaaagcttatattttgataaat	CRISPR spacer
tgaggcagataaaagcttatatttggctaaag	Protospacer
. * *   **************** * ****

202. spacer 1.38|952955|32|LS483303|CRISPRCasFinder,CRT matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 9, identity: 0.719

ccatgactataaaagcttatattttgataaat	CRISPR spacer
ggatgactataaaggattatatttttttgata	Protospacer
  ***********.* *********  *.*

203. spacer 1.38|952955|32|LS483303|CRISPRCasFinder,CRT matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 9, identity: 0.719

ccatgactataaaagcttatattttgataaat	CRISPR spacer
ggatgactataaaggattatatttttttgata	Protospacer
  ***********.* *********  *.*

204. spacer 1.38|952955|32|LS483303|CRISPRCasFinder,CRT matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 9, identity: 0.719

ccatgactataaaagcttatattttgataaat	CRISPR spacer
ggatgactataaaggattatatttttttgata	Protospacer
  ***********.* *********  *.*

205. spacer 1.44|953321|32|LS483303|CRISPRCasFinder,CRT matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaccacgcagagcggcgacaacctgacgtt	CRISPR spacer
accgtcgcgcagatcggcgacgacctgacgcc	Protospacer
.* ..*.****** *******.********..

206. spacer 1.45|953382|32|LS483303|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.719

ctatagcagcactccaccagctcgagcagcag	CRISPR spacer
cgggtgtgtcactcgaccagctccagcagcag	Protospacer
* .  *.. ***** ******** ********

207. spacer 1.50|953688|32|LS483303|CRISPRCasFinder,CRT matches to KY744233 (Sulfolobus islandicus rod-shaped virus 5, partial genome) position: , mismatch: 9, identity: 0.719

cagttgaagcgctttaaaaaattctggacggc	CRISPR spacer
gactgtaaacgcttttaaaaattctggactaa	Protospacer
 * *  **.****** ************* .

208. spacer 1.50|953688|32|LS483303|CRISPRCasFinder,CRT matches to KY744235 (Sulfolobus islandicus rod-shaped virus 6, partial genome) position: , mismatch: 9, identity: 0.719

cagttgaagcgctttaaaaaattctggacggc	CRISPR spacer
gactgtaaacgcttttaaaaattctggactaa	Protospacer
 * *  **.****** ************* .

209. spacer 1.50|953688|32|LS483303|CRISPRCasFinder,CRT matches to KY744230 (Sulfolobus islandicus rod-shaped virus 10, partial genome) position: , mismatch: 9, identity: 0.719

cagttgaagcgctttaaaaaattctggacggc	CRISPR spacer
gactataaacgcttttaaaaattctggactaa	Protospacer
 * *  **.****** ************* .

210. spacer 1.50|953688|32|LS483303|CRISPRCasFinder,CRT matches to KY744234 (Sulfolobus islandicus rod-shaped virus 11, partial genome) position: , mismatch: 9, identity: 0.719

cagttgaagcgctttaaaaaattctggacggc	CRISPR spacer
gactgtaaacgcttttaaaaattctggactaa	Protospacer
 * *  **.****** ************* .

211. spacer 1.50|953688|32|LS483303|CRISPRCasFinder,CRT matches to KY744229 (Sulfolobus islandicus rod-shaped virus 8, partial genome) position: , mismatch: 9, identity: 0.719

cagttgaagcgctttaaaaaattctggacggc	CRISPR spacer
gacattaaacgcttttaaaaattctggactaa	Protospacer
 *  * **.****** ************* .

212. spacer 1.50|953688|32|LS483303|CRISPRCasFinder,CRT matches to KY744228 (Sulfolobus islandicus rod-shaped virus 9, partial genome) position: , mismatch: 9, identity: 0.719

cagttgaagcgctttaaaaaattctggacggc	CRISPR spacer
gacattaaacgcttttaaaaattctggactaa	Protospacer
 *  * **.****** ************* .

213. spacer 1.50|953688|32|LS483303|CRISPRCasFinder,CRT matches to KY744231 (Sulfolobus islandicus rod-shaped virus 4, partial genome) position: , mismatch: 9, identity: 0.719

cagttgaagcgctttaaaaaattctggacggc	CRISPR spacer
gactgtaaacgcttttaaaaattctggactaa	Protospacer
 * *  **.****** ************* .

214. spacer 1.50|953688|32|LS483303|CRISPRCasFinder,CRT matches to KY744232 (Sulfolobus islandicus rod-shaped virus 7, partial genome) position: , mismatch: 9, identity: 0.719

cagttgaagcgctttaaaaaattctggacggc	CRISPR spacer
gactgtaaacgcttttaaaaattctggactaa	Protospacer
 * *  **.****** ************* .

215. spacer 1.51|953749|32|LS483303|CRISPRCasFinder,CRT matches to NC_005128 (Vibrio vulnificus YJ016 plasmid pYJ016, complete sequence) position: , mismatch: 9, identity: 0.719

agatcgacatgagccgccgcgcgacgaataac	CRISPR spacer
agtgtttcatgagtcgctgcgcgacgaatact	Protospacer
**  .  ******.***.************ .

216. spacer 1.51|953749|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP012741 (Vibrio vulnificus strain FORC_017 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

agatcgacatgagccgccgcgcgacgaataac	CRISPR spacer
agtgtttcatgagtcgctgcgcgacgaatact	Protospacer
**  .  ******.***.************ .

217. spacer 1.52|953810|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP020950 (Rhizobium sp. CIAT894 plasmid pRheCIAT894c, complete sequence) position: , mismatch: 9, identity: 0.719

gactatcgcgggctgctgaaatcaaccggcga	CRISPR spacer
gtaaagggcaggctgctgaaatcatccggcag	Protospacer
*   *  **.************** *****..

218. spacer 2.6|977664|32|LS483303|CRISPRCasFinder,CRT matches to MT028491 (Ochrobactrum phage vB_OspM_OC, complete genome) position: , mismatch: 9, identity: 0.719

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
tcgtttagagtggtgtattcaaaatctttgac	Protospacer
*  *******  **************    *

219. spacer 2.8|977786|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP011009 (Bacillus simplex strain SH-B26 plasmid pSHB26, complete sequence) position: , mismatch: 9, identity: 0.719

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
ttatctttaattattgagatgatgctccgcat	Protospacer
 * ************ ** *******..  *

220. spacer 2.8|977786|32|LS483303|CRISPRCasFinder,CRT matches to MN693961 (Marine virus AFVG_250M531, complete genome) position: , mismatch: 9, identity: 0.719

atttcttt-----aattatttagctgatgcttttaaa	CRISPR spacer
-----tatgaaagaattatttagctgatgcagttaag	Protospacer
     * *     *****************  ****.

221. spacer 2.13|977603|34|LS483303|PILER-CR matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ttacgccggtatcccgctccctgttcagccgacc	Protospacer
.*..******* *** **************   .

222. spacer 2.13|977603|34|LS483303|PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccctg	Protospacer
**********.*** ********* *.. *.*

223. spacer 2.13|977603|34|LS483303|PILER-CR matches to NZ_CP021367 (Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccctg	Protospacer
**********.*** ********* *.. *.*

224. spacer 2.13|977603|34|LS483303|PILER-CR matches to NZ_CP021649 (Acidovorax sp. T1 plasmid p1-T1, complete sequence) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccctg	Protospacer
**********.*** ********* *.. *.*

225. spacer 2.13|977603|34|LS483303|PILER-CR matches to NZ_CP021363 (Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccctg	Protospacer
**********.*** ********* *.. *.*

226. spacer 2.14|977664|34|LS483303|PILER-CR matches to NZ_CP046399 (Bacillus sp. A260 plasmid unnamed11, complete sequence) position: , mismatch: 9, identity: 0.735

tgttttagagatgtgtattcaaaatcagatagga	CRISPR spacer
taatttagaggtgtttattcaaaatcatcttcta	Protospacer
*. *******.*** ************  *   *

227. spacer 2.14|977664|34|LS483303|PILER-CR matches to NZ_CP018742 (Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence) position: , mismatch: 9, identity: 0.735

tgttttagagatgtgtattcaaaatcagatagga	CRISPR spacer
taatttagaggtgtttattcaaaatcatcttcta	Protospacer
*. *******.*** ************  *   *

228. spacer 6.3|2941183|33|LS483303|CRISPRCasFinder,CRT matches to MN855903 (Myoviridae sp. isolate 490, partial genome) position: , mismatch: 9, identity: 0.727

gttcgctgcaaccgctagccaagacggtaggtt	CRISPR spacer
gttcgctgcaaccgttcgccaagaccacaaagg	Protospacer
**************.* ******** ..*..

229. spacer 6.5|2941184|32|LS483303|PILER-CR matches to MN855903 (Myoviridae sp. isolate 490, partial genome) position: , mismatch: 9, identity: 0.719

ttcgctgcaaccgctagccaagacggtaggtt	CRISPR spacer
ttcgctgcaaccgttcgccaagaccacaaagg	Protospacer
*************.* ******** ..*..

230. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tgattgccggatgcggcgtaaacgccttatccggccta	Protospacer
*...**.**********.**************..**..

231. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ctggtgccggatgcggcgtaaacgccttatccggccta	Protospacer
. * **.**********.**************..**..

232. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

233. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

234. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

235. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

236. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tttttgccggatgcggcgtaaacgccttatccggccta	Protospacer
*  .**.**********.**************..**..

237. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
aaaatgccggatgcggcgtaaacgccttatccggccta	Protospacer
 *. **.**********.**************..**..

238. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caagtgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*. **.**********.**************..**..

239. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caattgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*..**.**********.**************..**..

240. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttcttgccggatgcggcgtaaacgccttatccggccta	Protospacer
*  .**.**********.**************..**..

241. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ccactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
. .***.**********.**************. **..

242. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tttatgccggatgcggcgtaaacgccttatccggccta	Protospacer
*   **.**********.**************..**..

243. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
atgttgccggatgcggcgtaaacgccttatccggccta	Protospacer
  *.**.**********.**************..**..

244. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caaatgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*. **.**********.**************..**..

245. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cggttgccggatgcggcgtaaacgccttatccggccta	Protospacer
..*.**.**********.**************..**..

246. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
gacttgccggatgcggcgtaaacgccttatccggccac	Protospacer
 * .**.**********.**************..**

247. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP037435 (Lactobacillus plantarum strain EM plasmid pEM6, complete sequence) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

248. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP015858 (Lactobacillus plantarum strain LZ227 plasmid LZ227p1, complete sequence) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

249. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP040857 (Lactobacillus plantarum strain 202195 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

250. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP021502 (Lactobacillus plantarum strain SRCM102022 plasmid pPL2022-1, complete sequence) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

251. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP035175 (Lactobacillus plantarum strain SRCM103426 plasmid unnamed1) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

252. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP035135 (Lactobacillus plantarum strain SRCM103311 plasmid unnamed4) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

253. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP035148 (Lactobacillus plantarum strain SRCM103361 plasmid unnamed1) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

254. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP032745 (Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

255. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP016271 (Lactobacillus plantarum subsp. plantarum strain CGMCC 1.557 plasmid pLp1, complete sequence) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

256. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP018325 (Lactobacillus plantarum subsp. plantarum strain TS12 plasmid pLP12-1, complete sequence) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

257. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP035021 (Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pA) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

258. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP035114 (Lactobacillus plantarum strain SRCM103295 plasmid unnamed1) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

259. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP035115 (Lactobacillus plantarum strain SRCM103295 plasmid unnamed2) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

260. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP046263 (Lactobacillus plantarum strain KCCP11226 plasmid pKCCP11226_01, complete sequence) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

261. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP035567 (Lactobacillus plantarum strain SRCM103300 plasmid unnamed1) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

262. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP012657 (Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK01, complete sequence) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

263. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP017955 (Lactobacillus plantarum strain C410L1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

264. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP023176 (Lactobacillus plantarum strain BDGP2 plasmid pLtBDGP2B, complete sequence) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

265. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP025417 (Lactobacillus plantarum strain X7021 plasmid unnamed5, complete sequence) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

266. spacer 1.8|952893|33|LS483303|PILER-CR matches to NC_021519 (Lactobacillus plantarum 16 plasmid Lp16H, complete sequence) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

267. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP046662 (Lactobacillus plantarum strain 83-18 plasmid p83-18.2, complete sequence) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

268. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP035146 (Lactobacillus plantarum strain SRCM103357 plasmid unnamed3) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

269. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP035146 (Lactobacillus plantarum strain SRCM103357 plasmid unnamed3) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

270. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP028262 (Lactobacillus plantarum strain SRCM102737 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

271. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP048024 (Lactobacillus plantarum strain CACC 558 plasmid p2CACC558, complete sequence) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

272. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP040376 (Lactobacillus plantarum subsp. plantarum strain BNH17 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

273. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP028223 (Lactobacillus plantarum strain SRCM101105 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

274. spacer 1.8|952893|33|LS483303|PILER-CR matches to NZ_CP028278 (Lactobacillus plantarum strain SRCM100995 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.697

gatcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
aagcccctgccgcctcttttgaataattttttg	Protospacer
.* *******  ***************. .

275. spacer 1.22|953748|33|LS483303|PILER-CR matches to NZ_CP031081 (Paracoccus yeei strain CCUG 32053 plasmid pYEE3, complete sequence) position: , mismatch: 10, identity: 0.697

gagatcgacatgagccgccgcgcgacgaataac	CRISPR spacer
gggatcgtcatgagccgccgcgcaacttcgtct	Protospacer
*.***** ***************.**      .

276. spacer 1.22|953748|33|LS483303|PILER-CR matches to NZ_CP031084 (Paracoccus yeei strain CCUG 32053 plasmid pYEE6, complete sequence) position: , mismatch: 10, identity: 0.697

gagatcgacatgagccgccgcgcgacgaataac	CRISPR spacer
gggatcgtcatgagccgccgcgcaacttcgtct	Protospacer
*.***** ***************.**      .

277. spacer 1.22|953748|33|LS483303|PILER-CR matches to NZ_CP039905 (Agrobacterium tumefaciens strain CFBP6623 plasmid pAtCFBP6623a, complete sequence) position: , mismatch: 10, identity: 0.697

gagatcgacatgagccgccgcgcgacgaataac	CRISPR spacer
gggatcgtcatgagccgccgtgcgacatcctcg	Protospacer
*.***** ************.*****.  .

278. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to KT361653 (Paenibacillus phage Paisley, complete genome) position: , mismatch: 10, identity: 0.688

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
ctttcctgcgtcctcttttgattgatctatta	Protospacer
 *..***************** *.***

279. spacer 1.37|952894|32|LS483303|CRISPRCasFinder,CRT matches to NC_028746 (Paenibacillus phage Harrison, complete genome) position: , mismatch: 10, identity: 0.688

atcccctgcgtcctcttttgaataatcgcggc	CRISPR spacer
ctttcctgcgtcctcttttgattgatctatta	Protospacer
 *..***************** *.***

280. spacer 1.38|952955|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP041068 (Bacillus megaterium strain KNU-01 plasmid pKNU_01_4, complete sequence) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
tttggtaaataaatgcttattttttgataaaa	Protospacer
..  *   ***** ****** **********

281. spacer 1.38|952955|32|LS483303|CRISPRCasFinder,CRT matches to CP041516 (Bacillus aryabhattai strain KNU10 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
tttggtaaataaatgcttattttttgataaaa	Protospacer
..  *   ***** ****** **********

282. spacer 1.38|952955|32|LS483303|CRISPRCasFinder,CRT matches to NC_019506 (Clostridium phage phiCP13O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************

283. spacer 1.38|952955|32|LS483303|CRISPRCasFinder,CRT matches to NC_019508 (Clostridium phage phiCP34O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************

284. spacer 1.38|952955|32|LS483303|CRISPRCasFinder,CRT matches to JF767208 (Clostridium phage phi13O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************

285. spacer 1.38|952955|32|LS483303|CRISPRCasFinder,CRT matches to GQ443085 (Clostridium phage CP26F, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************

286. spacer 1.38|952955|32|LS483303|CRISPRCasFinder,CRT matches to JF767210 (Clostridium phage phi9O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************

287. spacer 1.38|952955|32|LS483303|CRISPRCasFinder,CRT matches to JF767209 (Clostridium phage phi34O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************

288. spacer 1.38|952955|32|LS483303|CRISPRCasFinder,CRT matches to NC_011318 (Clostridium phage 39-O, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************

289. spacer 1.38|952955|32|LS483303|CRISPRCasFinder,CRT matches to NC_019496 (Clostridium phage phiCP26F, complete genome) position: , mismatch: 10, identity: 0.688

ccatgactataaaagcttatattttgataaat	CRISPR spacer
aaagcgttataaaggctcatattttgataata	Protospacer
  *  ..******.***.************

290. spacer 1.43|953260|32|LS483303|CRISPRCasFinder,CRT matches to NZ_KM406416 (Bifidobacterium breve strain JCM 7017 plasmid megaplasmid pMP7017, complete sequence) position: , mismatch: 10, identity: 0.688

gcgtccgtcaaagaggaagccaaagccatgca	CRISPR spacer
taaacaatcgaagaggaagccaaaaccatgac	Protospacer
  . * .**.**************.*****

291. spacer 1.44|953321|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP011667 (Streptomyces sp. Mg1 plasmid pSMg1-3, complete sequence) position: , mismatch: 10, identity: 0.688

gcgaccacgcagagcggcgacaacctgacgtt	CRISPR spacer
atcaccccgcagagcggcgacgacctcttcgt	Protospacer
.. *** **************.****  .  *

292. spacer 1.44|953321|32|LS483303|CRISPRCasFinder,CRT matches to MN224564 (Streptomyces phage Araceli, complete genome) position: , mismatch: 10, identity: 0.688

gcgaccacgcagagcggcgacaacctgacgtt	CRISPR spacer
aagaccacgcagacgggcgacaaccccaacaa	Protospacer
. ***********  **********. *

293. spacer 1.51|953749|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP039905 (Agrobacterium tumefaciens strain CFBP6623 plasmid pAtCFBP6623a, complete sequence) position: , mismatch: 10, identity: 0.688

agatcgacatgagccgccgcgcgacgaataac	CRISPR spacer
ggatcgtcatgagccgccgtgcgacatcctcg	Protospacer
.***** ************.*****.  .

294. spacer 1.51|953749|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP031081 (Paracoccus yeei strain CCUG 32053 plasmid pYEE3, complete sequence) position: , mismatch: 10, identity: 0.688

agatcgacatgagccgccgcgcgacgaataac	CRISPR spacer
ggatcgtcatgagccgccgcgcaacttcgtct	Protospacer
.***** ***************.**      .

295. spacer 1.51|953749|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP031084 (Paracoccus yeei strain CCUG 32053 plasmid pYEE6, complete sequence) position: , mismatch: 10, identity: 0.688

agatcgacatgagccgccgcgcgacgaataac	CRISPR spacer
ggatcgtcatgagccgccgcgcaacttcgtct	Protospacer
.***** ***************.**      .

296. spacer 1.54|953932|32|LS483303|CRISPRCasFinder,CRT matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 10, identity: 0.688

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ttgtttgcagcattaacgctccccaagtgccg	Protospacer
 *******.************ ***.   ..

297. spacer 1.54|953932|32|LS483303|CRISPRCasFinder,CRT matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 10, identity: 0.688

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ttgtttgcagcattaacgctctccaagtgccg	Protospacer
 *******.************ ***.   ..

298. spacer 2.6|977664|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP020079 (Vibrio campbellii strain 20130629003S01 plasmid pVCGX2, complete sequence) position: , mismatch: 10, identity: 0.688

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
tgttttagagctgtgtattaaaacgtttttgt	Protospacer
********** ******** ***  .   *.

299. spacer 2.6|977664|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 10, identity: 0.688

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
tgttttagagctgtgtattaaaacgtttttgt	Protospacer
********** ******** ***  .   *.

300. spacer 2.6|977664|32|LS483303|CRISPRCasFinder,CRT matches to NZ_CP019295 (Vibrio campbellii strain LMB29 plasmid pLMB157, complete sequence) position: , mismatch: 10, identity: 0.688

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
tgttttagagctgtgtattaaaacgtttttgt	Protospacer
********** ******** ***  .   *.

301. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ccattgccggatgcggcgtaaacgccttatccggccta	Protospacer
. ..**.**********.**************..**..

302. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_CP053046 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
aggttgccggatgcggcgtaaacgccttatccggcata	Protospacer
 .*.**.**********.**************..* ..

303. spacer 9.1|3859257|38|LS483303|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caaatgccggatgcggcgtaaacgccttatctggccta	Protospacer
.*. **.**********.*************...**..

304. spacer 1.25|953931|33|LS483303|PILER-CR matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctccccaagtgccg	Protospacer
  *******.************ ***.   ..

305. spacer 1.25|953931|33|LS483303|PILER-CR matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctctccaagtgccg	Protospacer
  *******.************ ***.   ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

724164 : 760029

Shigella_phage(66.67%)

transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQE42716.1\|724164_724659_+\|protease	hydrogenase 2 maturation protease	NA	NA	NA	NA
SQE42717.1\|724651_725140_+	hydrogenase-2 component protein	NA	NA	NA	NA
SQE42718.1\|725132_725474_+	hydrogenase nickel incorporation protein HybF	NA	NA	NA	NA
SQE42719.1\|725486_725735_+	hydrogenase-2 component protein	NA	NA	NA	NA
SQE42720.1\|725857_726724_-	glutathione S-transferase	NA	NA	NA	NA
SQE42721.1\|726928_728788_+	bifunctional glutathionylspermidine synthetase/amidase [includes glutathionylspermidine synthase;glutathionylspermidine amidase]	NA	NA	NA	NA
SQE42722.1\|729079_730579_+	low-affinity inorganic phosphate transporter 2	NA	NA	NA	NA
SQE42723.1\|730627_731320_-	ATP-binding protein YghT	NA	NA	NA	NA
SQE42724.1\|731508_732207_+	nucleoside triphosphate hydrolase domain	NA	NA	NA	NA
SQE42725.1\|732238_732997_+	ATP-binding protein yghR	NA	NA	NA	NA
SQE42726.1\|733042_734392_+	membrane protein, conserved protein	NA	NA	NA	NA
SQE42727.1\|734391_735216_+	ybl138	NA	NA	NA	NA
SQE42728.1\|735227_735788_+	transcriptional regulator	NA	NA	NA	NA
SQE42729.1\|735818_736889_+	putative permease	NA	NA	NA	NA
SQE42730.1\|736885_737965_+	putative permease	NA	NA	NA	NA
SQE42731.1\|738000_739173_-	putative aminotransferase	D2TEZ5	Emiliania_huxleyi_virus	7.2e-40	31.0
SQE42732.1\|739172_739421_-	putative acyl carrier protein	NA	NA	NA	NA
SQE42733.1\|739452_740367_-	putative epimerase	NA	NA	NA	NA
SQE42734.1\|740363_742085_-	AMP-binding protein	NA	NA	NA	NA
SQE42735.1\|742460_743603_+	DNA-binding transcriptional regulator	NA	NA	NA	NA
SQE42736.1\|743609_744374_-	DNA-binding transcriptional regulator GlcC	NA	NA	NA	NA
SQE42737.1\|744624_746124_+	glycolate oxidase subunit	NA	NA	NA	NA
SQE42738.1\|746123_747176_+	glycolate oxidase subunit	NA	NA	NA	NA
SQE42739.1\|747186_748410_+	glycolate oxidase iron-sulfur subunit	NA	NA	NA	NA
SQE42740.1\|748414_748819_+	protein GlcG	NA	NA	NA	NA
SQE42741.1\|748840_751012_+	malate synthase G	NA	NA	NA	NA
SQE42742.1\|751366_753049_+	glycolate permease	NA	NA	NA	NA
SQE42743.1\|753534_754704_+	inner membrane lipoprotein	NA	NA	NA	NA
SQE42744.1\|754707_755556_-\|transposase	IS911 transposase orfB	Q716C2	Shigella_phage	4.6e-89	58.3
SQE42745.1\|755895_756633_+	Putative peptide transport periplasmic protein	NA	NA	NA	NA
SQE42746.1\|757052_757523_+	Putative regulatory protein	NA	NA	NA	NA
SQE42747.1\|757560_758139_-\|transposase	IS5 transposase and trans-activator	Q38213	Escherichia_phage	1.3e-103	98.4
SQE42748.1\|758239_758872_-\|transposase	putative transposase	Q716C2	Shigella_phage	9.0e-122	96.6
SQE42749.1\|759084_759387_-\|transposase	transposase Orf1 of IS3 family IS element	Q716C1	Shigella_phage	1.2e-44	98.0
SQE42750.1\|759486_760029_+\|transposase	IS2, transposase orfB, truncation	Q9ZXG3	Shigella_phage	9.8e-101	95.0

DBSCAN-SWA_2

985332 : 998514

Escherichia_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQE42958.1\|985332_986094_+	stationary phase survival protein SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-59	48.0
SQE42959.1\|986087_986714_+	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	5.7e-36	49.7
SQE42960.1\|986853_987993_+	lipoprotein NlpD	D7RWE0	Brochothrix_phage	1.7e-06	35.6
SQE42961.1\|988055_988268_+	RNA polymerase sigma factor RpoS	NA	NA	NA	NA
SQE42962.1\|988213_989047_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	5.1e-32	37.6
SQE42963.1\|989140_990505_-	inner membrane permease YgbN	NA	NA	NA	NA
SQE42964.1\|990593_991370_-	hydroxypyruvate isomerase	NA	NA	NA	NA
SQE42965.1\|991374_992013_-	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
SQE42966.1\|992009_993272_-\|tRNA	paral putative tRNA synthase	A0A077SLJ7	Escherichia_phage	1.7e-135	61.4
SQE42967.1\|993268_994177_-	oxidoreductase YgbJ	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
SQE42968.1\|994372_995140_+	DeoR family transcriptional regulator	A0A077SK06	Escherichia_phage	7.4e-70	56.3
SQE42969.1\|995190_995847_-	serine/threonine-specific protein phosphatase 2	A0A222YWF0	Escherichia_phage	6.2e-49	46.3
SQE42970.1\|995952_998514_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.3e-30	20.6

DBSCAN-SWA_3

1049594 : 1055666

Bacillus_virus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQE43021.1\|1049594_1050797_-	glycine betaine/L-proline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.9e-28	39.4
SQE43022.1\|1051169_1051385_-	Insertion element protein	NA	NA	NA	NA
SQE43023.1\|1051540_1051834_+	IS1 protein InsB	U5P0U6	Shigella_phage	8.3e-46	92.8
SQE43024.1\|1051927_1052887_-	ribonucleoside-diphosphate reductase 2 beta chain	R4TBI6	Mycobacterium_phage	3.5e-133	71.8
SQE43025.1\|1052896_1055041_-	ribonucleoside-diphosphate reductase 2 alpha chain	A8E2R1	Enterococcus_phage	2.2e-196	48.4
SQE43026.1\|1055013_1055424_-	ribonucleotide reductase stimulatory protein	A0A142F1R4	Bacillus_phage	4.6e-18	44.4
SQE43027.1\|1055420_1055666_-	glutaredoxin-like protein	Q5K5J3	Oenococcus_phage	1.8e-06	35.3

DBSCAN-SWA_4

1381146 : 1387110

Shigella_phage(50.0%)

transposase,integrase

attL 1381058:1381073|attR 1386027:1386042

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1381058:1381073	attL	NA	NA	NA	NA
SQE43322.1\|1381146_1381347_-	response regulator inhibitor for tor operon	K7P7V0	Enterobacteria_phage	2.4e-33	100.0
SQE43323.1\|1381471_1381816_-	prophage protein	K7PJY7	Enterobacterial_phage	5.3e-60	100.0
SQE43324.1\|1381916_1382096_-	prophage protein	K7PL40	Enterobacteria_phage	5.6e-29	98.3
SQE43325.1\|1382202_1382505_+\|transposase	transposase Orf1 of IS3 family IS element	Q716C1	Shigella_phage	1.2e-44	98.0
SQE43326.1\|1382717_1383350_+\|transposase	putative transposase	Q716C2	Shigella_phage	9.0e-122	96.6
SQE43327.1\|1383551_1384553_-	Acyltransferase family	Q716G0	Shigella_phage	6.3e-186	100.0
SQE43328.1\|1384708_1385866_-\|integrase	integrase	Q716F9	Shigella_phage	3.7e-222	99.2
SQE43329.1\|1386177_1387110_-	transporter protein	E7DYY8	Enterobacteria_phage	1.5e-165	99.0
1386027:1386042	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1632917 : 1642358

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQE43545.1\|1632917_1633844_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-23	30.8
SQE43546.1\|1633848_1634580_+	ABC transporter permease	NA	NA	NA	NA
SQE43547.1\|1634560_1634668_-	putative inner membrane protein	NA	NA	NA	NA
SQE43548.1\|1634727_1635459_-	MerR family transcriptional regulator	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
SQE43549.1\|1635680_1637366_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
SQE43550.1\|1637362_1638082_+	two-component response-regulatory protein YehT	NA	NA	NA	NA
SQE43551.1\|1638128_1638599_+	conserved protein, DUF1456 family	Q9EYF4	Enterobacteria_phage	5.2e-82	100.0
SQE43552.1\|1638638_1639100_-	lipoprotein yehR	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
SQE43553.1\|1639224_1641225_-	zinc finger SWIM domain-containing protein	Q9EYF6	Enterobacteria_phage	0.0e+00	95.7
SQE43554.1\|1641221_1642358_-	von Willebrand factor type A domain protein YehP	Q9EYF7	Enterobacteria_phage	3.2e-162	97.4

DBSCAN-SWA_6

1727891 : 1783572

Enterobacteria_phage(18.75%)

integrase,coat,transposase

attL 1781725:1781784|attR 1792286:1792374

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQE43624.1\|1727891_1729286_+	colanic acid biosynthesis protein	A0A291LBB9	Klebsiella_phage	6.3e-19	31.8
SQE43625.1\|1729460_1730354_+	UTP--glucose-1-phosphate uridylyltransferase subunit GalF	A0A127AW70	Bacillus_phage	2.3e-46	42.0
SQE43626.1\|1730726_1731812_+	dTDP-D-glucose 4,6-dehydratase rmlB	I7HTA3	Enterobacteria_phage	5.7e-100	53.6
SQE43627.1\|1731811_1732711_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.3e-28	35.2
SQE43628.1\|1732769_1733648_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	6.6e-107	64.1
SQE43629.1\|1733652_1734198_+	dTDP-4-dehydrorhamnose 3,5-epimerase RfbC	I7HJC4	Enterobacteria_phage	3.5e-50	57.3
SQE43630.1\|1734213_1735470_+	putative O-antigen transporter	NA	NA	NA	NA
SQE43631.1\|1735499_1736390_+	glycosyl transferase family protein	NA	NA	NA	NA
SQE43632.1\|1736418_1737288_+\|coat	Spore coat polysaccharide biosynthesis protein spsA	NA	NA	NA	NA
SQE43633.1\|1737308_1738457_+	Uncharacterised protein	NA	NA	NA	NA
SQE43634.1\|1739310_1739469_-	Uncharacterised protein	NA	NA	NA	NA
SQE43635.1\|1739559_1740966_+	6-phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	1.1e-37	28.3
SQE43636.1\|1741214_1742381_+	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	1.7e-110	52.4
SQE43637.1\|1742527_1743505_+	regulator of length of O-antigen component of lipopolysaccharide chains	NA	NA	NA	NA
SQE43638.1\|1743601_1744213_-	histidine biosynthesis bifunctional protein [includes phosphoribosyl-AMP cyclohydrolase;phosphoribosyl-ATP pyrophosphatase]	NA	NA	NA	NA
SQE43639.1\|1744206_1744983_-	imidazole glycerol phosphate synthase subunit	NA	NA	NA	NA
SQE43640.1\|1744964_1745702_-	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase	NA	NA	NA	NA
SQE43641.1\|1745701_1746292_-	imidazole glycerol phosphate synthase subunit	NA	NA	NA	NA
SQE43642.1\|1746291_1747359_-	imidazole glycerol-phosphate dehydratase/histidinol phosphatase	NA	NA	NA	NA
SQE43643.1\|1747358_1748429_-	histidinol-phosphate aminotransferase	NA	NA	NA	NA
SQE43644.1\|1748425_1749730_-	histidinol dehydrogenase	NA	NA	NA	NA
SQE43645.1\|1749735_1750635_-	ATP phosphoribosyltransferase	A0A0F7Q4B0	Cellulophaga_phage	1.8e-11	94.7
SQE43646.1\|1751255_1752080_+	protein YeeZ	NA	NA	NA	NA
SQE43647.1\|1752104_1753055_+	LysR family transcriptional regulator	NA	NA	NA	NA
SQE43648.1\|1753321_1754680_+	putative amino acid permease	NA	NA	NA	NA
SQE43649.1\|1754912_1755917_+	inner membrane protein	NA	NA	NA	NA
SQE43650.1\|1755930_1756158_+	SirA family protein	NA	NA	NA	NA
SQE43651.1\|1756200_1757628_-	exodeoxyribonuclease I	NA	NA	NA	NA
SQE43652.1\|1757816_1758983_+	penicillin-binding protein 6B	B6DZZ7	Stx2-converting_phage	5.9e-228	99.5
SQE43653.1\|1759101_1759575_+	DNA gyrase inhibitory protein	NA	NA	NA	NA
SQE43654.1\|1759773_1760832_+	inner membrane protein	NA	NA	NA	NA
SQE43655.1\|1761003_1761333_+	putative alpha helix protein	NA	NA	NA	NA
SQE43656.1\|1762204_1762747_+	bifunctional adenosylcobalamin biosynthesis protein [includes adenosylcobinamide kinase; adenosylcobinamide-phosphate guanylyltransferase]	NA	NA	NA	NA
SQE43657.1\|1762743_1763487_+	cobalamin synthase	NA	NA	NA	NA
SQE43658.1\|1763498_1764578_+	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	NA	NA	NA	NA
SQE43659.1\|1764639_1765566_+	ErfK/YbiS/YcfS/YnhG family protein	NA	NA	NA	NA
SQE43660.1\|1765739_1766705_+	DeoR family transcriptional regulator	NA	NA	NA	NA
SQE43661.1\|1766756_1767215_-	putative PTS IIA-like nitrogen-regulatory protein PtsN	NA	NA	NA	NA
SQE43662.1\|1767225_1767510_-	PTS system galactitol-specific transporter subunit IIB	NA	NA	NA	NA
SQE43663.1\|1767533_1768013_-	PTS system galactitol-specific transporter subunit IIC	NA	NA	NA	NA
SQE43664.1\|1768036_1768339_+\|transposase	transposase Orf1 of IS3 family IS element	Q716C1	Shigella_phage	1.2e-44	98.0
SQE43665.1\|1768551_1769184_+\|transposase	putative transposase	Q716C2	Shigella_phage	9.0e-122	96.6
SQE43666.1\|1769282_1769798_+	Uncharacterised protein	NA	NA	NA	NA
SQE43667.1\|1770705_1771590_+	DNA-binding prophage protein	NA	NA	NA	NA
SQE43668.1\|1772961_1773600_-\|integrase	phage integrase	A0A1B0VMI6	Pseudomonas_phage	1.1e-29	42.3
SQE43669.1\|1773693_1774224_-\|integrase	bacteriophage integrase	B7SYF8	Stenotrophomonas_phage	1.4e-30	42.7
SQE43670.1\|1774787_1775705_+	Nitrogen assimilation regulatory protein nac	NA	NA	NA	NA
SQE43671.1\|1775806_1776757_+	LysR family transcriptional regulator	NA	NA	NA	NA
SQE43672.1\|1777063_1778518_+	multidrug efflux system	NA	NA	NA	NA
SQE43673.1\|1779146_1779863_-	putative cytoplasmic protein	NA	NA	NA	NA
SQE43674.1\|1780205_1781033_-	AMP nucleosidase	NA	NA	NA	NA
SQE43675.1\|1781059_1781353_-	IS1 protein InsB	U5P0U6	Shigella_phage	8.3e-46	92.8
SQE43676.1\|1781508_1781724_+	Insertion element protein	NA	NA	NA	NA
1781725:1781784	attL	NA	NA	NA	NA
SQE43677.1\|1782933_1783572_-\|integrase	phage integrase	A0A1B0VMI6	Pseudomonas_phage	1.1e-29	42.3
SQE43677.1\|1782933_1783572_-\|integrase	phage integrase	A0A1B0VMI6	Pseudomonas_phage	1.1e-29	42.3
1792286:1792374	attR	NA	NA	NA	NA

DBSCAN-SWA_7

1792716 : 1804581

Shigella_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQE43688.1\|1792716_1793010_+	IS1 protein InsB	U5P0U6	Shigella_phage	8.3e-46	92.8
SQE43689.1\|1793074_1793926_-	chaperone protein	NA	NA	NA	NA
SQE43690.1\|1794517_1794844_-	outer membrane protein N	Q1MVN1	Enterobacteria_phage	1.1e-22	46.3
SQE43691.1\|1795068_1795701_-\|transposase	putative transposase	Q716C2	Shigella_phage	9.0e-122	96.6
SQE43692.1\|1795913_1796216_-\|transposase	transposase Orf1 of IS3 family IS element	Q716C1	Shigella_phage	1.2e-44	98.0
SQE43693.1\|1796184_1796829_-	outer membrane protein N	Q1MVN1	Enterobacteria_phage	1.8e-48	54.5
SQE43694.1\|1797376_1797760_+	inner membrane protein YedR	NA	NA	NA	NA
SQE43695.1\|1797799_1798495_+	putative phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.8e-07	28.0
SQE43696.1\|1798561_1799980_+	DNA-cytosine methyltransferase	E5E3X6	Burkholderia_phage	3.0e-101	54.8
SQE43697.1\|1799960_1800431_+	patch repair protein	E5E3X5	Burkholderia_phage	1.5e-33	47.6
SQE43698.1\|1800419_1801340_-	putative DMT superfamily transporter inner membrane protein	NA	NA	NA	NA
SQE43699.1\|1801512_1802430_+	putative methyl-independent mismatch repair protein	NA	NA	NA	NA
SQE43700.1\|1802508_1802691_+	putative small protein	NA	NA	NA	NA
SQE43701.1\|1802886_1804581_+	cellulose synthesis regulatory protein (signal transduction protein)	A0A127AWB9	Bacillus_phage	1.3e-18	35.6

DBSCAN-SWA_8

1840314 : 1867668

Shigella_phage(37.5%)

transposase,integrase

attL 1840347:1840406|attR 1876572:1877720

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQE43745.1\|1840314_1840617_+\|transposase	transposase Orf1 of IS3 family IS element	Q716C1	Shigella_phage	1.2e-44	98.0
1840347:1840406	attL	NA	NA	NA	NA
SQE43746.1\|1840829_1841462_+\|transposase	putative transposase	Q716C2	Shigella_phage	9.0e-122	96.6
SQE43747.1\|1841337_1841658_-	Uncharacterised protein	NA	NA	NA	NA
SQE43748.1\|1841738_1842938_+\|integrase	integrase	NA	NA	NA	NA
SQE43749.1\|1842974_1843211_+	Uncharacterised protein	NA	NA	NA	NA
SQE43750.1\|1843306_1843678_+	Uncharacterised protein	NA	NA	NA	NA
SQE43751.1\|1843703_1844237_+	Uncharacterised protein	NA	NA	NA	NA
SQE43752.1\|1844309_1844744_+	Protein of uncharacterised function (DUF2787)	NA	NA	NA	NA
SQE43753.1\|1845354_1846173_-	Protein of uncharacterised function (DUF726)	NA	NA	NA	NA
SQE43754.1\|1846234_1847137_-	putative transcriptional regulator, HTH	A0A0R6PH67	Moraxella_phage	4.4e-37	31.9
SQE43755.1\|1847515_1847842_+	Uncharacterised protein	NA	NA	NA	NA
SQE43756.1\|1847890_1850491_-	putative DNA-directed DNA polymerase	NA	NA	NA	NA
SQE43757.1\|1850537_1851176_-	Uncharacterised protein	NA	NA	NA	NA
SQE43758.1\|1851516_1852647_-\|integrase	phage integrase	A0A221SAN4	Ralstonia_phage	2.0e-15	27.6
SQE43759.1\|1852795_1853938_-	Uncharacterised protein	NA	NA	NA	NA
SQE43760.1\|1854246_1855770_+	putative type I methylase	A0A2H4PQP4	Staphylococcus_phage	4.1e-88	38.5
SQE43761.1\|1855759_1857004_+	putative restriction-modification DNA specificity domain protein	A0A2H4PQP5	Staphylococcus_phage	2.6e-08	22.0
SQE43762.1\|1857000_1857684_+	metal-binding protein	NA	NA	NA	NA
SQE43763.1\|1857736_1861021_+	putative type I restriction enzyme HsdR protein	A0A220A398	Liberibacter_phage	6.9e-64	27.4
SQE43764.1\|1861017_1861773_+	putative hydrolase	NA	NA	NA	NA
SQE43765.1\|1861824_1862334_+	Uncharacterised protein	NA	NA	NA	NA
SQE43766.1\|1862391_1864263_+	Uncharacterized conserved protein	NA	NA	NA	NA
SQE43767.1\|1864995_1865736_-	Uncharacterised protein	NA	NA	NA	NA
SQE43768.1\|1865816_1867019_+\|integrase	integrase	NA	NA	NA	NA
SQE43769.1\|1867050_1867302_+	Uncharacterised protein	NA	NA	NA	NA
SQE43770.1\|1867461_1867668_-\|transposase	transposase (partial)	Q716C2	Shigella_phage	1.3e-32	92.6
1876572:1877720	attR	NA	NA	NA	NA

DBSCAN-SWA_9

2197880 : 2294215

Enterobacteria_phage(41.46%)

tail,terminase,protease,portal,lysis,transposase,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQE44090.1\|2197880_2198702_-\|protease	putative protease	NA	NA	NA	NA
SQE44091.1\|2198977_2199286_-	acid shock protein	NA	NA	NA	NA
SQE44092.1\|2199709_2200963_-	major facilitator superfamily protein	NA	NA	NA	NA
SQE44093.1\|2201069_2201963_+	LysR family transcriptional regulator	NA	NA	NA	NA
SQE44094.1\|2202097_2203318_+	protein Mlc (making large colonies protein)	NA	NA	NA	NA
SQE44095.1\|2203442_2204138_+	dithiobiotin synthetase	NA	NA	NA	NA
SQE44096.1\|2204090_2205347_-	voltage-gated ClC-type chloride channel	NA	NA	NA	NA
SQE44097.1\|2205541_2206156_-	anaerobic dimethyl sulfoxide reductase maturation protein (twin-arginine leader-binding protein)	A0A077SLS7	Escherichia_phage	8.7e-29	36.3
SQE44098.1\|2206198_2207053_-	putative dimethyl sulfoxide reductase, anchor subunit	NA	NA	NA	NA
SQE44099.1\|2207054_2207672_-	anaerobic dimethyl sulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	9.5e-76	59.6
SQE44100.1\|2207682_2210079_-	putative dimethyl sulfoxide reductase, olydopterin dinucleotide binding subunit	A0A077SK27	Escherichia_phage	4.8e-208	48.6
SQE44101.1\|2210166_2212593_-	putative dimethyl sulfoxide reductase, oxidoreductase subunit	A0A077SK27	Escherichia_phage	4.5e-214	49.2
SQE44102.1\|2212791_2213097_-	protein	NA	NA	NA	NA
SQE44103.1\|2213168_2213915_+	lipoprotein	NA	NA	NA	NA
SQE44104.1\|2213917_2214478_-	spermidine N1-acetyltransferase	NA	NA	NA	NA
SQE44105.1\|2214512_2214854_-	protein	NA	NA	NA	NA
SQE44106.1\|2214988_2215315_+	inner membrane protein	A0A218MNG8	uncultured_virus	9.9e-24	55.6
SQE44107.1\|2215520_2216138_+	starvation sensing protein RspA	Q6A202	Oenococcus_phage	1.9e-20	35.9
SQE44108.1\|2216207_2216510_+\|transposase	transposase Orf1 of IS3 family IS element	Q716C1	Shigella_phage	1.2e-44	98.0
SQE44109.1\|2216722_2217355_+\|transposase	putative transposase	Q716C2	Shigella_phage	9.0e-122	96.6
SQE44110.1\|2217495_2218455_+	putative pathogenicity island protein	NA	NA	NA	NA
SQE44111.1\|2218861_2219575_+	putative AraC-type regulatory protein encoded in prophage	NA	NA	NA	NA
SQE44112.1\|2219765_2219981_+\|lysis	lysis protein S from lambdoid prophage	A5LH82	Enterobacteria_phage	2.9e-32	94.4
SQE44113.1\|2219985_2220204_+	Qin prophage protein	K7PGU6	Enterobacteria_phage	1.6e-17	63.8
SQE44114.1\|2220228_2220525_-	Uncharacterised protein	NA	NA	NA	NA
SQE44115.1\|2220652_2221186_+	prophage lysozyme (endolysin)	K7PLY1	Enterobacteria_phage	2.6e-98	94.9
SQE44116.1\|2221182_2221680_+	Qin prophage protein	NA	NA	NA	NA
SQE44117.1\|2222930_2223104_+	GnsA/GnsB family transcriptional regulator	NA	NA	NA	NA
SQE44118.1\|2223399_2223606_+	DLP12 prophage; predicted protein	A0A0K2FJ18	Enterobacteria_phage	3.4e-22	79.4
SQE44119.1\|2224158_2224653_+	prophage protein	A0A291AWV8	Escherichia_phage	2.2e-83	99.4
SQE44120.1\|2224652_2226755_+\|terminase	DNA packaging protein of prophage (terminase large subunit)	A0A291AWY5	Escherichia_phage	0.0e+00	96.4
SQE44121.1\|2226751_2226964_+	prophage protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
SQE44122.1\|2226963_2228472_+\|head,tail,portal	portal protein (head-tail preconnector protein) from prophage	K7PJP3	Enterobacteria_phage	2.3e-288	99.4
SQE44123.1\|2228416_2230444_+\|protease	ATP-dependent Clp protease proteolytic subunit	K7PGT6	Enterobacteria_phage	0.0e+00	99.2
SQE44124.1\|2230530_2230854_+	prophage protein	K7PLV6	Enterobacteria_phage	2.5e-51	98.1
SQE44125.1\|2230846_2231122_+	prophage protein	K7PH43	Enterobacteria_phage	2.3e-45	100.0
SQE44126.1\|2231133_2231712_+\|tail	Minor tail protein Z (GPZ) of prophage	A5LH33	Enterobacteria_phage	1.8e-100	97.9
SQE44127.1\|2231708_2232110_+\|tail	Minor tail protein U	A0A291AWY2	Escherichia_phage	8.3e-73	100.0
SQE44128.1\|2232121_2232865_+\|tail	Major tail protein V	A0A291AWU6	Escherichia_phage	6.6e-132	99.6
SQE44129.1\|2232925_2233312_+\|tail	minor tail component of prophage	A0A291AWW5	Escherichia_phage	1.6e-65	100.0
SQE44130.1\|2233320_2233650_+\|tail	minor tail protein T of prophage	A5LH37	Enterobacteria_phage	7.6e-56	100.0
SQE44131.1\|2233621_2236687_+\|tail	putative tail length tape measure protein from putative prophage	A0A291AWX1	Escherichia_phage	0.0e+00	99.2
SQE44132.1\|2236686_2237016_+\|tail	Minor tail protein M	A5LH39	Enterobacteria_phage	1.1e-59	99.1
SQE44133.1\|2237025_2237724_+\|tail	phage minor tail protein	A5LH40	Enterobacteria_phage	4.3e-133	99.1
SQE44134.1\|2237729_2238473_+\|tail	putative tail fiber component K of prophage	K7PLW1	Enterobacteria_phage	3.1e-150	98.4
SQE44135.1\|2238469_2239018_+	Tail assembly protein I from prophage	A0A291AWV5	Escherichia_phage	2.6e-93	98.9
SQE44136.1\|2239078_2242576_+	Host specificity protein J of prophage	A0A291AWT4	Escherichia_phage	0.0e+00	97.4
SQE44137.1\|2242646_2243246_+	outer membrane precursor Lom	A5LH44	Enterobacteria_phage	8.2e-109	97.5
SQE44138.1\|2243807_2244545_-	Uncharacterised protein	NA	NA	NA	NA
SQE44139.1\|2244675_2246709_+\|tail	phage tail domain-containing protein	X2KTY7	Enterobacteria_phage	9.7e-194	56.5
SQE44140.1\|2247381_2247972_-	putative DNA-invertase	A0A0A7NPV4	Enterobacteria_phage	1.2e-24	38.8
SQE44141.1\|2248288_2248522_-	Qin prophage DNA-binding transcriptional regulator	A0A192Y6D5	Salmonella_phage	1.1e-32	88.3
SQE44142.1\|2249308_2250592_+	metabolite transport protein YdfJ	NA	NA	NA	NA
SQE44143.1\|2250680_2252141_+	putative sugar dehydrogenase	H8ZJP8	Ostreococcus_tauri_virus	1.5e-42	29.6
SQE44144.1\|2252176_2252380_-	selenium carrying protein	J9Q802	Salmonella_phage	1.6e-11	55.2
SQE44145.1\|2252556_2253243_-	GntR family transcriptional regulator	NA	NA	NA	NA
SQE44146.1\|2253331_2254078_-	NADP-dependent L-serine/L-allo-threonine dehydrogenase	NA	NA	NA	NA
SQE44147.1\|2254214_2256260_+	dipeptidyl carboxypeptidase II	NA	NA	NA	NA
SQE44148.1\|2256303_2256822_-	competence damage-inducible protein A	NA	NA	NA	NA
SQE44149.1\|2257097_2257490_+	stress response protein	NA	NA	NA	NA
SQE44150.1\|2257744_2258635_+	putative signal transduction protein	A0A127AWB9	Bacillus_phage	1.1e-19	37.7
SQE44151.1\|2259075_2260263_-	major facilitator superfamily protein	NA	NA	NA	NA
SQE44152.1\|2260457_2261357_+	amino acid metabolite efflux	NA	NA	NA	NA
SQE44153.1\|2261387_2261606_-	multiple antibiotic resistance protein	NA	NA	NA	NA
SQE44154.1\|2261637_2262021_-	DNA-binding transcriptional activator MarA	D0R0F8	Streptococcus_phage	4.7e-09	32.3
SQE44155.1\|2262040_2262475_-	multiple antibiotic resistance regulatory protein	NA	NA	NA	NA
SQE44156.1\|2262686_2263352_+	multiple antibiotic resistance protein	NA	NA	NA	NA
SQE44157.1\|2263376_2264567_-	sugar efflux transporter	NA	NA	NA	NA
SQE44158.1\|2264716_2265832_-	protein	NA	NA	NA	NA
SQE44159.1\|2265909_2266791_-	transcriptional regulator YneJ	NA	NA	NA	NA
SQE44160.1\|2266891_2268280_+	succinate semialdehyde dehydrogenase	NA	NA	NA	NA
SQE44161.1\|2268343_2269270_+	glutaminase 2	NA	NA	NA	NA
SQE44162.1\|2269269_2269629_+	putative cytoplasmic protein	NA	NA	NA	NA
SQE44163.1\|2269767_2271186_+	putative signal transduction protein	G3MA91	Bacillus_virus	1.9e-18	29.6
SQE44164.1\|2271412_2272864_+	altronate oxidoreductase	NA	NA	NA	NA
SQE44165.1\|2273070_2273985_+	inner membrane protein	NA	NA	NA	NA
SQE44166.1\|2273988_2274747_-	trans-aconitate methyltransferase	NA	NA	NA	NA
SQE44167.1\|2274803_2275094_-	autoinducer-2 (AI-2) modifying protein LsrG	NA	NA	NA	NA
SQE44168.1\|2275117_2275993_-	putative aldolase	NA	NA	NA	NA
SQE44169.1\|2276019_2277042_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
SQE44170.1\|2277053_2278046_-	ABC transporter permease	NA	NA	NA	NA
SQE44171.1\|2278045_2279074_-	ABC transporter permease	NA	NA	NA	NA
SQE44172.1\|2279067_2280603_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.4e-21	30.4
SQE44173.1\|2280851_2281805_+	putative sugar-binding regulatory protein	NA	NA	NA	NA
SQE44174.1\|2281883_2283476_+	putative carbohydrate kinase	NA	NA	NA	NA
SQE44175.1\|2284006_2288029_+	lipoprotein/autotransporter domain-containing protein	NA	NA	NA	NA
SQE44176.1\|2288025_2289426_+	lipoprotein/autotransporter domain-containing protein	A0A2L1IV18	Escherichia_phage	4.0e-106	49.2
SQE44177.1\|2289648_2289915_+	DNA-binding transcriptional regulator HipB	NA	NA	NA	NA
SQE44178.1\|2289914_2291237_+	protein hipA	NA	NA	NA	NA
SQE44179.1\|2291435_2291807_-	Uncharacterised protein	NA	NA	NA	NA
SQE44180.1\|2291849_2292317_-	Uncharacterised protein	NA	NA	NA	NA
SQE44181.1\|2292316_2292586_-	Uncharacterised protein	NA	NA	NA	NA
SQE44182.1\|2292817_2294215_-\|transposase	putative transposase	NA	NA	NA	NA

DBSCAN-SWA_10

2453237 : 2460508

Enterobacteria_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQE44312.1\|2453237_2453465_+	putative outer membrane protein	Q1MVN1	Enterobacteria_phage	7.9e-20	65.7
SQE44313.1\|2453591_2454371_+	outer membrane protein N (porin)	Q1MVN1	Enterobacteria_phage	9.5e-73	56.4
SQE44314.1\|2454511_2454946_+	putative universal stress protein	A0A1W6JNV4	Morganella_phage	1.8e-28	52.8
SQE44315.1\|2455122_2456058_+\|tRNA	C32 tRNA thiolase	A0A0U2S5Z2	Escherichia_phage	1.1e-144	97.7
SQE44316.1\|2456186_2457560_-	ATP-independent RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.6e-53	33.1
SQE44317.1\|2457589_2457763_-	Uncharacterised protein	NA	NA	NA	NA
SQE44318.1\|2458037_2459021_-	zinc transport protein	NA	NA	NA	NA
SQE44319.1\|2459275_2460508_+	putative signaling protein	A0A127AWB9	Bacillus_phage	3.1e-17	39.5

DBSCAN-SWA_11

2658078 : 2672101

Enterobacteria_phage(50.0%)

transposase,tail,integrase

attL 2665238:2665251|attR 2672928:2672941

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQE44510.1\|2658078_2659677_-\|tail	putative tail fiber protein	K7PHC9	Enterobacteria_phage	3.4e-40	71.8
SQE44511.1\|2659807_2660545_+	Uncharacterised protein	NA	NA	NA	NA
SQE44512.1\|2661106_2661706_-	outer membrane precursor Lom	A5LH44	Enterobacteria_phage	8.2e-109	97.5
SQE44513.1\|2661775_2665189_-\|tail	tail component of prophage CP-933K	K7PKJ2	Enterobacteria_phage	0.0e+00	97.1
2665238:2665251	attL	NA	NA	NA	NA
SQE44514.1\|2665249_2665921_-\|tail	phage tail assembly protein	A0A2R9YJH6	Escherichia_phage	1.5e-103	98.7
SQE44515.1\|2666074_2666377_+\|transposase	transposase Orf1 of IS3 family IS element	Q716C1	Shigella_phage	6.1e-44	97.0
SQE44516.1\|2666589_2667222_+\|transposase	putative transposase	Q716C2	Shigella_phage	9.0e-122	96.6
SQE44517.1\|2667350_2667509_+	phage protein	M1FJ61	Enterobacteria_phage	6.4e-21	88.5
SQE44518.1\|2667505_2668570_+	DNA thiolation protein; phage protein	T1SBJ4	Salmonella_phage	2.0e-134	65.1
SQE44519.1\|2668723_2668942_+	ybl16	M1FQT7	Enterobacteria_phage	1.7e-35	98.6
SQE44520.1\|2668989_2669229_+	bacteriophage protein	M1FPC8	Enterobacteria_phage	3.9e-38	94.9
SQE44521.1\|2669368_2669605_+	excisionase	NA	NA	NA	NA
SQE44522.1\|2669594_2670737_+\|integrase	prophage lambda integrase	Q77Z02	Phage_21	3.6e-206	100.0
SQE44523.1\|2670850_2672101_-	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-23	100.0
2672928:2672941	attR	NA	NA	NA	NA

DBSCAN-SWA_12

3524899 : 3584646

Shigella_phage(53.85%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQE45303.1\|3524899_3526570_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	3.6e-61	31.2
SQE45304.1\|3526782_3527451_+	inner membrane protein	NA	NA	NA	NA
SQE45305.1\|3527693_3528389_-	transporter	NA	NA	NA	NA
SQE45306.1\|3528381_3529809_-	putative electron transport protein YkgF	NA	NA	NA	NA
SQE45307.1\|3529819_3530539_-	hydroxyacid oxidoreductase (Fe-S centre)	NA	NA	NA	NA
SQE45308.1\|3531066_3531921_-	transcriptional regulator YkgD	NA	NA	NA	NA
SQE45309.1\|3532146_3533472_+	putative pyridine nucleotide-disulfide oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	8.5e-114	47.8
SQE45310.1\|3533828_3534422_+	inner membrane protein	NA	NA	NA	NA
SQE45311.1\|3535011_3535863_+	Putatve transcriptional regulator ykgA	NA	NA	NA	NA
SQE45312.1\|3535819_3535978_+	Uncharacterised protein	NA	NA	NA	NA
SQE45313.1\|3536002_3540259_-	Ig domain-containing protein	NA	NA	NA	NA
SQE45314.1\|3541373_3541475_+	small predicted membrane protein	NA	NA	NA	NA
SQE45315.1\|3541835_3542102_+	50S ribosomal protein L31	NA	NA	NA	NA
SQE45316.1\|3542101_3542242_+	50S ribosomal protein L36	NA	NA	NA	NA
SQE45317.1\|3543326_3543869_+	putative fimbrial transcriptional regulator	NA	NA	NA	NA
SQE45318.1\|3543943_3544531_+	fimbrillin	NA	NA	NA	NA
SQE45319.1\|3544588_3545257_+	putative fimbrial protein	NA	NA	NA	NA
SQE45320.1\|3545282_3547808_+	putative fimbrial outer membrane usher protein	NA	NA	NA	NA
SQE45321.1\|3547797_3549441_+	putative fimbrial protein	NA	NA	NA	NA
SQE45322.1\|3549409_3550120_+	putative fimbrial protein	NA	NA	NA	NA
SQE45323.1\|3551009_3551624_-	integral membrane protein	NA	NA	NA	NA
SQE45324.1\|3552041_3552731_+	putative xanthine dehydrogenase, iron-sulfur binding subunit	NA	NA	NA	NA
SQE45325.1\|3552727_3553684_+	putative xanthine dehydrogenase, FAD-binding subunit	NA	NA	NA	NA
SQE45326.1\|3553680_3554565_+	putative xanthine dehydrogenase, molybdenum-binding subunit	A0A0P0I429	Acinetobacter_phage	1.3e-12	29.0
SQE45327.1\|3554724_3555879_+	putative xanthine dehydrogenase, molybdenum-binding subunit	NA	NA	NA	NA
SQE45328.1\|3555888_3556845_+	xanthine dehydrogenase accessory factor	NA	NA	NA	NA
SQE45329.1\|3556823_3557234_+	transcriptional regulator	NA	NA	NA	NA
SQE45330.1\|3557966_3558881_+	bactoprenol glucosyl transferase; CPS-53 (KpLE1) prophage	U5P087	Shigella_phage	1.0e-171	99.7
SQE45331.1\|3558882_3560196_+	CPS-53 (KpLE1) prophage; putative inner membrane protein	U5P0I5	Shigella_phage	6.0e-237	99.5
SQE45332.1\|3560232_3560844_-	Uncharacterised protein	NA	NA	NA	NA
SQE45333.1\|3560870_3561068_+\|transposase	transposase IS3/IS911 family protein	U5P4I9	Shigella_phage	3.0e-28	98.4
SQE45334.1\|3561124_3561427_+\|transposase	transposase Orf1 of IS3 family IS element	Q716C1	Shigella_phage	1.2e-44	98.0
SQE45335.1\|3561639_3562272_+\|transposase	putative transposase	Q716C2	Shigella_phage	1.3e-120	95.7
SQE45336.1\|3562672_3563926_-	gamma-glutamyl phosphate reductase	A0A1X9I5D4	Streptococcus_phage	9.8e-96	47.2
SQE45337.1\|3563937_3565041_-	gamma-glutamyl kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
SQE45338.1\|3565328_3566384_+	outer membrane phosphoporin protein E	Q1MVN1	Enterobacteria_phage	1.7e-117	60.6
SQE45339.1\|3566422_3566824_-	sigma factor-binding protein crl (curlin genes transcriptional activator)	NA	NA	NA	NA
SQE45340.1\|3566881_3568126_-	esterase	NA	NA	NA	NA
SQE45341.1\|3568217_3568676_-	xanthine-guanine phosphoribosyltransferase	NA	NA	NA	NA
SQE45342.1\|3568936_3570394_+	aminoacyl-histidine dipeptidase	NA	NA	NA	NA
SQE45343.1\|3570450_3570951_-	peptide chain release factor H	NA	NA	NA	NA
SQE45344.1\|3570919_3571186_-	ykfJ	NA	NA	NA	NA
SQE45345.1\|3571419_3571794_-	putative acetyltransferase	NA	NA	NA	NA
SQE45346.1\|3571881_3572280_-	toxin YafO	NA	NA	NA	NA
SQE45347.1\|3572282_3572576_-	antitoxin of the YafO-YafN toxin-antitoxin system	NA	NA	NA	NA
SQE45348.1\|3572627_3573683_-	DNA polymerase IV	NA	NA	NA	NA
SQE45349.1\|3573753_3574677_-	lateral flagellar motor protein B (MotB-like)	NA	NA	NA	NA
SQE45350.1\|3574679_3575543_-	lateral flagellar motor protein A (MotA-like)	NA	NA	NA	NA
SQE45351.1\|3575555_3576272_-	flagellar biosynthesis sigma factor	NA	NA	NA	NA
SQE45352.1\|3576291_3576759_-	lateral flagellar associated protein (FliL-like)	NA	NA	NA	NA
SQE45353.1\|3576766_3577828_-	lateral flagellar hook length control protein (FliK-like)	NA	NA	NA	NA
SQE45354.1\|3577824_3578070_-	lateral flagellar chaperone protein (FliT-like)	NA	NA	NA	NA
SQE45355.1\|3578074_3578467_-	lateral flagellar chaperone protein (FliS-like)	NA	NA	NA	NA
SQE45356.1\|3578489_3579806_-	lateral flagellar hook associated protein 2 (FliD-like)	NA	NA	NA	NA
SQE45357.1\|3580057_3580972_-	lateral flagellin FliC-like protein	NA	NA	NA	NA
SQE45358.1\|3581457_3582300_+	lateral flagellar transcriptional regulator	NA	NA	NA	NA
SQE45359.1\|3582354_3583332_-	lateral flagellar putative hook associated protein	NA	NA	NA	NA
SQE45360.1\|3583498_3584131_-\|transposase	putative transposase	Q716C2	Shigella_phage	9.0e-122	96.6
SQE45361.1\|3584343_3584646_-\|transposase	transposase Orf1 of IS3 family IS element	Q716C1	Shigella_phage	1.2e-44	98.0

DBSCAN-SWA_13

4127895 : 4168800

Escherichia_phage(38.46%)

transposase,integrase,tRNA

attL 4148913:4148962|attR 4178010:4178059

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQE45857.1\|4127895_4128873_-\|tRNA	lysyl-tRNA synthetase	A0A2K9KZX5	Tupanvirus	6.8e-28	28.2
SQE45858.1\|4129197_4131006_+	fumarate reductase flavoprotein subunit	NA	NA	NA	NA
SQE45859.1\|4130998_4131733_+	fumarate reductase iron-sulfur subunit	NA	NA	NA	NA
SQE45860.1\|4131743_4132139_+	fumarate reductase subunit C	NA	NA	NA	NA
SQE45861.1\|4132149_4132509_+	fumarate reductase subunit D	NA	NA	NA	NA
SQE45862.1\|4132571_4133705_+	beta-lactamase	NA	NA	NA	NA
SQE45863.1\|4133793_4134327_+	outer membrane lipoprotein	A0A1W6JNX6	Morganella_phage	3.6e-47	55.0
SQE45864.1\|4134323_4134641_-	quaternary ammonium compound-resistance protein	NA	NA	NA	NA
SQE45865.1\|4134822_4134969_-	entericidin B	NA	NA	NA	NA
SQE45866.1\|4135079_4135205_-	entericidin A	NA	NA	NA	NA
SQE45867.1\|4135256_4135823_-	elongation factor P (EF-P)	NA	NA	NA	NA
SQE45868.1\|4135864_4136893_+	radical SAM superfamily protein	NA	NA	NA	NA
SQE45869.1\|4137287_4138157_+	protein	NA	NA	NA	NA
SQE45870.1\|4138349_4138703_-	putative lipoprotein	NA	NA	NA	NA
SQE45871.1\|4138840_4140487_-	chaperonin Cpn60	A0A2I7SAK5	Vibrio_phage	5.3e-190	68.9
SQE45872.1\|4140530_4140824_-	10 kDa chaperonin (Protein Cpn10) (groES protein)	K4F9I2	Cronobacter_phage	9.2e-13	45.4
SQE45873.1\|4141099_4142356_+	inner membrane protein YjeH	NA	NA	NA	NA
SQE45874.1\|4142371_4142848_-	protein FxsA (suppressor of F exclusion of phage T7)	NA	NA	NA	NA
SQE45875.1\|4143184_4144621_+	aspartate ammonia-lyase	NA	NA	NA	NA
SQE45876.1\|4144738_4146040_+	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA
SQE45877.1\|4146155_4146494_+	divalent cation tolerance protein	NA	NA	NA	NA
SQE45878.1\|4146469_4148167_+	thiol:disulfide interchange protein	NA	NA	NA	NA
SQE45879.1\|4148203_4148779_+	putative transcriptional regulator	NA	NA	NA	NA
4148913:4148962	attL	NA	NA	NA	NA
SQE45880.1\|4149675_4150263_+	Uncharacterised protein	O21975	Escherichia_phage	3.4e-59	57.5
SQE45881.1\|4150609_4151794_+\|integrase	integrase	A0A221SAN4	Ralstonia_phage	3.3e-32	32.6
SQE45882.1\|4151849_4152206_-	Uncharacterised protein	NA	NA	NA	NA
SQE45883.1\|4152255_4154181_-	inner membrane protein from phage origin	A0A1B0VP75	Pseudomonas_phage	4.8e-17	26.5
SQE45884.1\|4154254_4155565_-\|integrase	phage integrase	Q9T1P3	Pseudomonas_phage	8.9e-23	29.5
SQE45885.1\|4156083_4156437_+	Uncharacterised protein	NA	NA	NA	NA
SQE45886.1\|4156429_4156861_+	Uncharacterised protein	NA	NA	NA	NA
SQE45887.1\|4156907_4157336_+	Protein of uncharacterised function (DUF2787)	NA	NA	NA	NA
SQE45888.1\|4157394_4157859_+	Uncharacterised protein	NA	NA	NA	NA
SQE45889.1\|4157837_4158077_+	DeoR-like helix-turn-helix domain	NA	NA	NA	NA
SQE45890.1\|4158154_4158538_+	Uncharacterised protein	NA	NA	NA	NA
SQE45891.1\|4158681_4159431_+	putative oxidoreductase	NA	NA	NA	NA
SQE45892.1\|4159533_4160247_+	putative DNA-binding protein	NA	NA	NA	NA
SQE45893.1\|4160305_4160617_+	Uncharacterised protein	NA	NA	NA	NA
SQE45894.1\|4160690_4160996_+	Permease, cytosine/purine, uracil, thiamine, allantoin family	A0A2L1IV26	Escherichia_phage	3.9e-06	96.2
SQE45895.1\|4160930_4161308_-\|transposase	IS1 transposase	Q71TF0	Escherichia_phage	2.4e-66	98.4
SQE45896.1\|4161379_4161595_+	Insertion element protein	NA	NA	NA	NA
SQE45897.1\|4162126_4162321_-	putative cytoplasmic protein	NA	NA	NA	NA
SQE45898.1\|4162622_4163126_-\|transposase	IS1 transposase	U5P0U6	Shigella_phage	4.8e-94	99.4
SQE45899.1\|4163444_4165127_+	outer membrane usher protein	NA	NA	NA	NA
SQE45900.1\|4165148_4165898_+	putative fimbrial chaperone	NA	NA	NA	NA
SQE45901.1\|4165899_4166964_+	protein involved in detoxification of methylglyoxal	NA	NA	NA	NA
SQE45902.1\|4167006_4167207_-	glycogen synthesis protein GlgS	NA	NA	NA	NA
SQE45903.1\|4167475_4168069_+	membrane protein YqiJ	NA	NA	NA	NA
SQE45904.1\|4168102_4168378_+\|transposase	IS1 transposase	Q71TE9	Escherichia_phage	5.0e-45	97.8
SQE45905.1\|4168422_4168800_+\|transposase	IS1 transposase	Q71TF0	Escherichia_phage	1.3e-67	100.0
4178010:4178059	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LS483303

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection