CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LS483329	Streptococcus pyogenes strain NCTC12058 genome assembly, chromosome: 1	3 crisprs	cas3,cas5,cas8c,cas7,cas4,cas1,cas2,csn2,cas9,csm6,DinG,DEDDh,csa3	0	9	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LS483329_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483329_2

413761-413923

TypeI

I-C

Consensus_repeat	Method
GTCTCACCCTTCATGGGTGAGTGGATTGAAA	PILER-CR

2 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of LS483329_2

>merge|LS483329|2|413761-413923|PILER-CR
GTCTCACCCTTCATGGGTGAGTGGATTGAAATAAATTTGGCGAGGAGAGCGTGAGGCGAATCTAGTGTCTCACCCTTCATGGGTGAGTGGATTGAAATATTAGCACTGGTTATATTAAGTGCCGAGGAAAAAGTCTCACCCTTCATGGGTGAGTGGATTGAAA

>LS483329|2|1|413761-413923|PILER-CR
GTCTCACCCTTCATGGGTGAGTGGATTGAAA	TAAATTTGGCGAGGAGAGCGTGAGGCGAATCTAGT
GTCTCACCCTTCATGGGTGAGTGGATTGAAA	TATTAGCACTGGTTATATTAAGTGCCGAGGAAAAA
GTCTCACCCTTCATGGGTGAGTGGATTGAAA

Protein	Signature genes	Signature genes Name	Protein_function
LS483329.1\|SQF06913.1\|412282_413308_+\|DNA-polymerase	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
LS483329.1\|SQF06915.1\|414084_414795_+\|cytochrome-c-type-biogenesis-protein	unknown	unknown	gnl\|CDD\|223856
LS483329.1\|SQF06922.1\|421185_421659_-\|arginine-repressor	unknown	unknown	gnl\|CDD\|224355
LS483329.1\|SQF06918.1\|416667_417402_+\|two-component-response-regulator	unknown	unknown	gnl\|CDD\|227095
LS483329.1\|SQF06923.1\|421800_422481_+\|Fumarate-and-nitrate-reduction-regulatory-protein	unknown	unknown	gnl\|CDD\|223736
LS483329.1\|SQF06906.1\|402225_402789_+\|shikimate-kinase	unknown	unknown	gnl\|CDD\|379082
LS483329.1\|SQF06919.1\|417404_419138_+\|two-component-sensor-kinase	unknown	unknown	gnl\|CDD\|225519
LS483329.1\|SQF06914.1\|413318_413612_+\|hypothetical-cytosolic-protein	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|224262
LS483329.1\|SQF06920.1\|419210_420290_+\|cytoplasmic-protein	unknown	unknown	gnl\|CDD\|225197
LS483329.1\|SQF06917.1\|415473_416580_+\|bifunctional-methionine-sulfoxide-reductase-A/B	unknown	unknown	gnl\|CDD\|184456
LS483329.1\|SQF06905.1\|401229_401625_+\|hypothetical-cytosolic-protein	unknown	unknown	gnl\|CDD\|181104
LS483329.1\|SQF06912.1\|411611_412286_+\|RecB-family-exonuclease	cas4	COG1468_cas4_CAS-I-A:CAS-I-B:CAS-I-C:CAS-I-D:CAS-II-B	gnl\|CDD\|224385
LS483329.1\|SQF06916.1\|414807_415431_+\|disulfide-interchange-protein	unknown	unknown	gnl\|CDD\|239264
LS483329.1\|SQF06909.1\|408133_408862_+\|CRISPR-associated-protein-cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
LS483329.1\|SQF06907.1\|402790_405439_+\|valyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|235582
LS483329.1\|SQF06908.1\|405592_408001_+\|CRISPR-associated-helicase-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
LS483329.1\|SQF06910.1\|408861_410757_+\|CRISPR-associated-protein,-Csd1-family	cas8c	cd09642_cas8c_CAS-I-C	gnl\|CDD\|273839
LS483329.1\|SQF06921.1\|420303_421020_+\|B3/4-domain-containing-protein	unknown	unknown	gnl\|CDD\|225917
LS483329.1\|SQF06911.1\|410761_411610_+\|putative-cytoplasmic-protein	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
LS483329.1\|SQF06924.1\|422754_423990_+\|arginine-deiminase	unknown	unknown	gnl\|CDD\|234949

Protein	Function_ID	Function_description	E-value
LS483329.1\|SQF06913.1\|412282_413308_+\|DNA-polymerase	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
LS483329.1\|SQF06915.1\|414084_414795_+\|cytochrome-c-type-biogenesis-protein	gnl\|CDD\|223856	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones].	1.97047e-42
LS483329.1\|SQF06922.1\|421185_421659_-\|arginine-repressor	gnl\|CDD\|224355	COG1438, ArgR, Arginine repressor [Transcription].	2.23847e-66
LS483329.1\|SQF06918.1\|416667_417402_+\|two-component-response-regulator	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	2.38778e-83
LS483329.1\|SQF06923.1\|421800_422481_+\|Fumarate-and-nitrate-reduction-regulatory-protein	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	1.0783e-39
LS483329.1\|SQF06906.1\|402225_402789_+\|shikimate-kinase	gnl\|CDD\|379082	pfam13238, AAA_18, AAA domain.	0.00400512
LS483329.1\|SQF06919.1\|417404_419138_+\|two-component-sensor-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	1.25462e-63
LS483329.1\|SQF06914.1\|413318_413612_+\|hypothetical-cytosolic-protein	gnl\|CDD\|224262	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms].	7.88939e-35
LS483329.1\|SQF06920.1\|419210_420290_+\|cytoplasmic-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	3.04225e-36
LS483329.1\|SQF06917.1\|415473_416580_+\|bifunctional-methionine-sulfoxide-reductase-A/B	gnl\|CDD\|184456	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB.	6.05633e-164
LS483329.1\|SQF06905.1\|401229_401625_+\|hypothetical-cytosolic-protein	gnl\|CDD\|181104	PRK07758, PRK07758, hypothetical protein; Provisional.	0.000151325
LS483329.1\|SQF06912.1\|411611_412286_+\|RecB-family-exonuclease	gnl\|CDD\|224385	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense mechanisms].	9.34311e-43
LS483329.1\|SQF06916.1\|414807_415431_+\|disulfide-interchange-protein	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	2.22296e-35
LS483329.1\|SQF06909.1\|408133_408862_+\|CRISPR-associated-protein-cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	3.32713e-117
LS483329.1\|SQF06907.1\|402790_405439_+\|valyl-tRNA-synthetase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
LS483329.1\|SQF06908.1\|405592_408001_+\|CRISPR-associated-helicase-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.29598e-159
LS483329.1\|SQF06910.1\|408861_410757_+\|CRISPR-associated-protein,-Csd1-family	gnl\|CDD\|273839	TIGR01863, CRISPR-associated_protein_CT1133_family, CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein that tends to be found near CRISPR repeats of the DVULG subtype of CRISPR/Cas locus. We designate this family Csd1 (CRISPR/Cas Subtype DVULG protein 1). The species range for this subtype, so far, is exclusively bacterial and mesophilic, although CRISPR loci in general are particularly common among archaea and thermophilic bacteria. In a few species (Xanthomonas axonopodis pv. citri str. 306 and Streptococcus mutans UA159), homology to this protein family is split across two tandem genes; the trusted cutoff to this family is set low enough to capture at least the longer of the two.	0
LS483329.1\|SQF06921.1\|420303_421020_+\|B3/4-domain-containing-protein	gnl\|CDD\|225917	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only].	8.38431e-106
LS483329.1\|SQF06911.1\|410761_411610_+\|putative-cytoplasmic-protein	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	4.74456e-161
LS483329.1\|SQF06924.1\|422754_423990_+\|arginine-deiminase	gnl\|CDD\|234949	PRK01388, PRK01388, arginine deiminase; Provisional.	0

>LS483329.1|SQF06914.1|413318_413612_+|hypothetical-cytosolic-protein
MMVLVTYDVNTETPAGRKRLRHVAKLCVNYGQRVQNSVFECSVTPAEFVDIKHRLTQIIDEKTDSIRFYLLGKNWQRRVETLGRSDSYDPDKGVLLL
>LS483329.1|SQF06913.1|412282_413308_+|DNA-polymerase
MKKLLNTLYLTQEDFYVTKEGDNIVIKQEGKVLKRFPFRIIDGIVCFSYLGVSPALVKLCTENQINLSFHTPQGRFCGRYIGSTNGNVLLRREHYRLSDREESLEYAKRFILAKISNSRKYLLRFKRDHRQQIDTKLFEAVNDELIWALEMVQAADNKDSLRGIEGQAANQYFRIFNDLVLTDKKTFYFQGRSKRPPLDCVNALLSFGYSLLTFECQSALEAVGLDSYVGFFHTDRPGRASLALDLVEEFRSYIVDRFVFSLINKGQLQKKHFEVKENGSILMTENGRAIFIDLWQKRKHTEVEHPFTKEKVKLMLLPYVQAQLLAKAIRGDLESYPPFMV
>LS483329.1|SQF06912.1|411611_412286_+|RecB-family-exonuclease
MVYAEDDYLMLSGIQHFQFCKRQWALIHIEQQWLDNEATAHGQILHTKADNPYIKEKRKDLLVSRAMPISSAELGLSGIMDVVEFYKDDQGVSLRGKRGKWLPKVVEYKRGKPKKDTRDIVQLVAQTMCLEETLDCDINEGCLYYHSVNQRVIVPMTSALRQEVKELAAEMHEVYQSQMLPKAAYFKNCQLCSLVDICKPRLSKKTRSVSRYINEAMTSEEMDL
>LS483329.1|SQF06911.1|410761_411610_+|putative-cytoplasmic-protein
MLEHKIDFMVTLEVKEANANGDPLNGNMPRTDAKGYGVMSDVSIKRKIRNRLQDMGKPIFVQANERIEDDFRSLERRFSQHFTAKTPDKEIEEKANALWFDVRAFGQVFTYLKKSIGVRGPVSISMAKSLEPIVISSLQITRSTNGMEAKNNSGRSSDTMGTKHFVDYGVYVLKGSINAYFAEKTGFSQEDAEAIKEVLVSLFENDASSARPEGSMRVCEVFWFTHSSKLGNVSSARVFDLLEYHQSIEEKSTYDAYQIHLNQEKLAKYEAKGLTVEILEGL
>LS483329.1|SQF06910.1|408861_410757_+|CRISPR-associated-protein,-Csd1-family
MDFFTSLLKTYEKAELADLVDHQKRSNESVLLPIYHTSLKSNGKNIISVKLDKDGQFHKAEFMADKQMIIFPVTADSVARSGSHPAPHPLVDKFAYYSAEMGQSQYDSFHKQLNNWIDYCEEGDVKRFLTIVQQFILKPEFLILILDSLIGPDYQNNQLKVTFCDATGKEKLIDLSACFLEFSIDQFQGFKNESVSTFKTLHQSYISFVEANREKLGICNISGREEQLTDKHRGLMGNTKIISVSNKREAYKGRFREREDVFSVGYETSEKIHLMLKYLLENKNTSTWLGSSQYLINWFSDDLTNDSRLDIVSPIFDDGLEEDDDDDTPPVITLATEDNKRIGKSFIKGQKLFANDATYYVAILNKTSNGRIALKYFRQLQASQLLTNLNKWQETYSWESRSKFGKSRLRTPTFHDILNVSYGVDRDRFLELDNDNFKSDQIQKLVASLIDGKPMPQSIVKKLGNNVKERHRYHKHWYQVEQVCLAILHKQNGEEFSPMLDHTNQNRSYLFGRLLAIFELIETLRYGLDGNNNDRITNAERYWTAYTGQPTKLMMLLENKIKPYEEPLKLNRRGSWMKLEKEKEEILELLNPLLETETMEKPLDYRFIFGYYAEKNYYYTKQNTEVTESEE
>LS483329.1|SQF06909.1|408133_408862_+|CRISPR-associated-protein-cas5
MYRSRDFYVRVSGQRALFTNPATKGGSERSSYSVPTRQALNGIVDAIYYKPTFTNIVTEVKVINQIQTELQGVRALLHDYSADLSYVSYLSDVVYLIKFHFVWNEDRKDLNSDRLPAKHEAIMERSIRKGGRRDVFLGTRECLGLVDDISQEEYETTVSYYNGVNIDLGIMFHSFAYPKDKKTPLKSYFTKTVMKNGVITFKAQSECDIVNTLSSYAFKAPEEIKSVNDECMEYDAMEKGEN
>LS483329.1|SQF06908.1|405592_408001_+|CRISPR-associated-helicase-Cas3
MRMILAHYDCKKDKKQSLDEHLWHVACSSRQEASIIGQGDVLFLIGLYHDLGKADRTFQDKLLNNPNRHVDHSYAGAKYLCSIIGPHLKNRGVDKNERMTFNEMVGYVISAHHGMYDLCYYFDDAEYYGFNKFKNRINRDLDGYHYHEDIKGYALKLEKKLCDYGYKDLRELIDKAFDNYQQAMSSLNWQDKSEWNYYQSCMVRLYLSLLKNADILDTVNAYGLKISPMDKTERSFLKHSYLAAIEQKYASFGQPNNQLNTIRTEIAERVKERGKRDSKGIYRLDLPTGAGKTNLSMRYAFHQLVHHDKSRFFYITPFLSVLEQNASEIRKVTGDLGVLEHHSNVVKQANEDDDDKDSLLSAYLSDSWDSQVVLTSMVQFFQTLFKTKSANLRRFSSLINSIVILDEVQSLPIEVTTLFNLTMNFLNKVMDTTIVLCTATQPAYDSSEIDHRICYGGNLGELAEIVELTIEEKQIFSRTELRKFDDSDQKVHLTDVINLILGEENSVLAIFNTKKTVHNCYTMLKDMTDRPVYQLSTNMCAQHRLDLIAKIKTELQNNIPIICISTQLIEAGVDVDFHRVIRSYSGIDSIVQAAGRCNREGKRDKGQVTLVNLTNEEENISRLTEIKAKKEATESILHKIGSPIDISTLNRDFFEYYYANNQGLMDYPLEDNLSIYDYLSLNIYQTANKKFKGKLKQAFKTAGAKMNLINNDMIGILVPYGEAEKKLAYLEELGMSHFLSAEDYQTIKSLLKELQPFTVNVRENDPLFETTKSYLNGQILVLTSEYYDTERGVKYDSASFYF
>LS483329.1|SQF06907.1|402790_405439_+|valyl-tRNA-synthetase
MTELSPKYNPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLREQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVGYSRERFTLDEGLSKAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQVATTRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIVNKLIPIVGDEHADPEFGTGVVKITPAHDPNDFEVGQRHNLPQVNVMNDDGTMNELAGDFAGMDRFEARQATVAKLEELGALVNIEKCVHSVGHSERSGAAVEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQLWWGHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNEGLTLEEAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHLLYNFIWEEFANWYVELTKEVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQYAQGSIVTAVYPTVTPTFENEAAHKGVESLKDLIRAVRNARAEVNVAPSKPITILVKTADSELEDFFTSNVNYIKRFTNPEKLEISSAIAAPELAMTSIITGAEIYLPLADLLNVEEELARLDKELAKWQKELDMVGKKLGNERFVANAKPEVVQKEKDKQADYQAKYDATQERIAEMKKIKS
>LS483329.1|SQF06906.1|402225_402789_+|shikimate-kinase
MNLIIIGAQASGKMTIGQEVARQTGMTLFHNHDSIDFVLRFMPWSQESTALIERIRFAFFETFAKTGQDMIFTIVIDFNDPNDVAMLEKIQAVFQSYDQEVLFVELKTDIEERLKRNRTENRLKHKPLKRNIEWSEQDIQSTMAYAVFNPEEPPKTLTHYQKINNTQLTAAETAQLIIQKMTHIKEN
>LS483329.1|SQF06905.1|401229_401625_+|hypothetical-cytosolic-protein
MAKQKNRKKALKLEMKRNGLLKKAGQVFDKAVESVETAVDKTISAGKNLVEKGSQTVENLTASKERLTLDEFAGQPVVAGIRSDLVETLYAEGIHSAQAFKEWTEKDLLALKGIGPATVKKLVENGASFKK
>LS483329.1|SQF06915.1|414084_414795_+|cytochrome-c-type-biogenesis-protein
MTLSLVLMVSVFGAGLLSFFSPCIFPVLPVYLGILLDADDSKTITIFGKKLYWYGIVKTLAFIFGLSTIFVILGYGAGFLGNILYAVWFRYLLGALVIILGIHQMGLITIKSLQFQKSLTFHNNKNRNGLFNAFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLMIIYTLGLGIPFLLISFASGIVLKQFNKLKPHILLLKKVGGVLIIVMGILLMTGTLNNLAQLFG
>LS483329.1|SQF06916.1|414807_415431_+|disulfide-interchange-protein
MKKGLLVTTGLACLGLLTACSTQDNMAKKEITQDKMSMAVKKKDKMSTSKDKSMMADKSSDKKMTNDGPMAPDFELKGIDGKTYRLSEFKGKKVYLKFWASWCSICLSTLADTEDLAKMSDKDYVVLTVVSPGHQGEKSEADFKKWFQGTDYKDLPVLLDPDGKLLEAYGVRSYPTEVFIGSDGVLAKKHIGYAKKSDIKKTLKGIH
>LS483329.1|SQF06917.1|415473_416580_+|bifunctional-methionine-sulfoxide-reductase-A/B
MEHKWKLWLFIVGVVLLIGGASVLIQKGQAKAFSQGKPQLPAKKVKSTKVDPNAPVDQKVIYLAGGCFWGVEEYFSQVDGVLDAVSGYANGRGDTTNYQLIHQTGHAETVEVTYDANRISLKELLLHFFRIIDPTSLNKQGNDRGSQYRTGIYYTDKADLAIIDEVFKEKAKDYKKKIVVEKAPLKHFIKAEDYHQDYLKKNPNGYCHIDINQATYPVIDESKYPKPSATEIKEKLSADEYRVTQKNETEKAFSNRYWDSFDAGIYVDVVTGEPLFSSKDKFESGCGWPSFSRPISPDVVRYKEDKSFNMTRTEVRSRSGNSHLGHVFTDGPKDQGGLRYCINSLSITFIPKADMEAKGYGYLLSSVE
>LS483329.1|SQF06918.1|416667_417402_+|two-component-response-regulator
MYSLLIVEDEYLVRQGIRSLVDFSQFKIDRVNEAENGQLAWDLFQKEPYDIVLTDINMPKLNGIQLAELIKQESPQTHLVFLTGYDDFNYALSALKLGADDYLLKPFSKADVEDMLGKLRKKLELSKKTETIQELVEQPQKEVSAIAMAIHERLADSDLTLKSLAQQLGFSPNYLSVLIKKDLGMPFQDYLVQERLKKAKLLLLTSNLKIYEIAEQVGFEDMNYFSQRFKQLVGVTPSQYKKGG
>LS483329.1|SQF06919.1|417404_419138_+|two-component-sensor-kinase
MKRYPLLVQLISYVFVIVIALITTLGLLYYQTSSRNIRQLIERDTRQSIRQSSQFIDAYIKPLKETTSVLAKNTEIQAFASQIHQENDKQVLQLMKMVLATNSDLQAAVLVTKDGRTVSTNSQLTMKTSSDMMAEPWYKAAIDRQAMPVLTPARQLSLSSKKEWVVSVTQEVVDRAGHNLGVLRLDIAYPTIKASLDQLQLGRQGFAFIVNDKHEFVYHPKKSVYSSSKEMAAMKPYLAIQNGYTKDKTSFVYQKLIPNSQWTLVGVASLDQLHRVQRQIFWSFLGTGLLACLICGFATILVLRRWIRPIQQLQQVILAIQKGDRQLRAQETGSPELTDLAQQFNALLDQIDSLMVAVADKEKAIGQYRLQALASQINPHFLYNTLDTIIWMAEFNDSKRVVEVTKSLAKYFRLALNQGNEYIRLADELDHVSQYLFIQKQRYGDKLSYEVQGLDVYADFVIPKLILQPLVENAIYHGIKEVDRKGMIKVTVSDTAQHLVLTVWDNGKGIEDSSLTNSQSLLTRGGVGLKNVDQRLKLQYGEAYQMTIHSQSDQFTEIQLSLPKMHELMADDTQENE
>LS483329.1|SQF06920.1|419210_420290_+|cytoplasmic-protein
MSLATDYFSRQTPIVEKLMAYGFEKRDNGYFYNERFMEGEFEAQLRIDEAGNIWDRVIDCDLEEDYLPLQQAAWQGTYTGQVRAAYLELLERLSVACFEATPFQSMQANRLAKHITKEWSDPMDYPFEKHPDLATYRVGGKWYAMIFSLLADKLDQIPERLVGQTCEVMTVKVNPKAFPQLLQQEGIYPAYHMSKKNWISIILDDKVTDDKLWTLVTQSRQLVNPNGLSNPNGPDYWVIPANLKYYDIDAEFAANDVILWTQKAGIAVGDYVLIYITAPVKSIRYVCQVLETNIPNEGYRKNPNIDKLMRLRKRQQYKDGLLSFDLMKEHGVAAVRGPRRLSPQLIAFLKEKEYFKENN
>LS483329.1|SQF06921.1|420303_421020_+|B3/4-domain-containing-protein
MVEFVADQSFWELFPDAKLGVVLLKDVQNQAESPEDVKQLLADSHELAKAYLTADNFSDNQVVQVYRKAYQHFKTKKGARSSIEALLKRVSNGQSIPSINPLVDIYNAASLRFGLPVGAEDSDSFIGDLRLTITDGGDDFYLIGDADNNPTLPNELCYKDDIGAVCRCLNWRDGERTMVTEHTKNAFLIIEALDQEGQNRLQEALDFIEGSAKMYLHAITSVHVLDKDNPHVLLFTEN
>LS483329.1|SQF06922.1|421185_421659_-|arginine-repressor
MNKKETRHQLIRSLISETTIHTQQELQERLQKNGITITQATLSRDMKELNLVKVTSGNDTHYEALAISQTRWEHRLRFYMEDALVMLKIVQHQIILKTLPGLAQSFGSILDAMQIPEIVATICGDDTCLIVCEDNEQAKACYETLSHYTPPFFFSNK
>LS483329.1|SQF06923.1|421800_422481_+|Fumarate-and-nitrate-reduction-regulatory-protein
MIRREDYQYLRKLNDFRYFSIEQFDKIVGQMEFRKAKKDHILFFEGDRRDKLFLVTSGYFKVEQSDQSGTFMYTDFIRHGTIFPYGGLFTDDYYHFSVVAMTDVTYFYFPVDLFEDYSLENRLQMKHLYSKMSKLLELHELRVRNLITSSASSRVIQSLAILLVEMGKDSDTLPFQLTTTDIAQISGTTRETVSHVLRDLKKQELITIKGKYLTYLDKDYFLQYTK
>LS483329.1|SQF06924.1|422754_423990_+|arginine-deiminase
MTAQTPIHVYSEIGKLKKVLLHRPGKEIENLMPDYLERLLFDDIPFLEDAQKEHDAFAQALRDEGIEVLYLETLAAESLVTPEIREAFIDEYLSEANIRGRATKKAIRELLMAIEDNQELIEKTMAGVQKSELPEIPASEKGLTDLVESNYPFAIDPMPNLYFTRDPFATIGTGVSLNHMFSETRNRETLYGKYIFTHHPIYGGGKVPMVYDRNETTRIEGGDELVLSKDVLAVGISQRTDAASIEKLLVNIFKQNLGFKKVLAFEFANNRKFMHLDTVFTMVDYDKFTIHPEIEGDLRVYSVTYDNEELHIVEEKGDLAELLAANLGVEKVDLIRCGGDNLVAAGREQWNDGSNTLTIAPGVVVVYNRNTITNAILESKGLKLIKIHGSELVRGRGGPRCMSMPFEREDI

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Crispr_ID: LS483329_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483329_3

640958-641058

Orphan

Consensus_repeat	Method
TATAATTAGACTATACCAATTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of LS483329_3

>merge|LS483329|3|640958-641058|CRISPRCasFinder
TATAATTAGACTATACCAATTTTATGTTTGACAAGACATTGTGGATATTATATACTGTAAACATACTGTTTTTATCGGTATAATTAGACTATACCAATTAT

>LS483329|3|2|640958-641058|CRISPRCasFinder
TATAATTAGACTATACCAATTTT	ATGTTTGACAAGACATTGTGGATATTATATACTGTAAACATACTGTTTTTATCGG
TATAATTAGACTATACCAATTAT

Protein	Signature genes	Signature genes Name	Protein_function
LS483329.1\|SQF07152.1\|653091_653340_+\|transglycosylase-associated-family-protein	unknown	unknown	gnl\|CDD\|225170
LS483329.1\|SQF07143.1\|641109_642924_+\|glucosamine-fructose-6-phosphate-aminotransferase	unknown	unknown	gnl\|CDD\|234729
LS483329.1\|SQF07134.1\|630235_630856_-\|phage-protein	unknown	unknown	gnl\|CDD\|289729
LS483329.1\|SQF07135.1\|631596_632211_+\|membrane-protein	unknown	unknown	gnl\|CDD\|223475
LS483329.1\|SQF07138.1\|633834_634206_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
LS483329.1\|SQF07144.1\|643119_643455_+\|phosphonoacetate-hydrolase	unknown	unknown	gnl\|CDD\|225380
LS483329.1\|SQF07146.1\|644212_644842_+\|histidine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
LS483329.1\|SQF07142.1\|640376_640934_+\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
LS483329.1\|SQF07140.1\|637580_638594_+\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|235111
LS483329.1\|SQF07150.1\|648558_649881_-\|amino-acid-symporter	unknown	unknown	gnl\|CDD\|224040
LS483329.1\|SQF07137.1\|633136_633835_-\|ABC-transporter-family-protein	unknown	unknown	gnl\|CDD\|224054
LS483329.1\|SQF07141.1\|638656_640159_+\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235619
LS483329.1\|SQF07147.1\|644857_645694_+\|polar-amino-acid-ABC-uptake-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270217
LS483329.1\|SQF07139.1\|634390_637501_+\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|180917
LS483329.1\|SQF07133.1\|627714_629979_+\|glycogen-phosphorylase	unknown	unknown	gnl\|CDD\|340853
LS483329.1\|SQF07151.1\|650410_652729_+\|DNA-helicase-II-/-ATP-dependent-DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429
LS483329.1\|SQF07148.1\|646062_646836_+\|protein-B	unknown	unknown	gnl\|CDD\|369335
LS483329.1\|SQF07145.1\|643561_644203_+\|histidine-transporter-permease	unknown	unknown	gnl\|CDD\|223836
LS483329.1\|SQF07149.1\|647185_648439_-\|cation-diffusion-facilitator-transporter-family-protein	unknown	unknown	gnl\|CDD\|223131
LS483329.1\|SQF07136.1\|632341_633127_-\|ABC-transporter-permease-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
LS483329.1\|SQF07152.1\|653091_653340_+\|transglycosylase-associated-family-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	1.43969e-13
LS483329.1\|SQF07143.1\|641109_642924_+\|glucosamine-fructose-6-phosphate-aminotransferase	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
LS483329.1\|SQF07134.1\|630235_630856_-\|phage-protein	gnl\|CDD\|289729	pfam12978, DUF3862, Domain of Unknown Function with PDB structure (DUF3862). Structure 3D4E shared structural similarity to beta-lactamase inhibitory proteins (BLIP) which already include 1XXM, 1S0W, 1JTG, 2G2U, 2G2W, 2B5R, and 3due. All of structures are involved in beta-lactamase inhibitor complex. (REF http://www.topsan.org/Proteins/JCSG/3d4e).	6.81674e-87
LS483329.1\|SQF07135.1\|631596_632211_+\|membrane-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	1.14841e-31
LS483329.1\|SQF07138.1\|633834_634206_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	2.60652e-49
LS483329.1\|SQF07144.1\|643119_643455_+\|phosphonoacetate-hydrolase	gnl\|CDD\|225380	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism].	2.02984e-64
LS483329.1\|SQF07146.1\|644212_644842_+\|histidine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	3.77502e-110
LS483329.1\|SQF07142.1\|640376_640934_+\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	2.3728e-38
LS483329.1\|SQF07140.1\|637580_638594_+\|6-phosphofructokinase	gnl\|CDD\|235111	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase.	0
LS483329.1\|SQF07150.1\|648558_649881_-\|amino-acid-symporter	gnl\|CDD\|224040	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism].	0
LS483329.1\|SQF07141.1\|638656_640159_+\|pyruvate-kinase	gnl\|CDD\|235619	PRK05826, PRK05826, pyruvate kinase; Provisional.	0
LS483329.1\|SQF07147.1\|644857_645694_+\|polar-amino-acid-ABC-uptake-transporter-substrate-binding-protein	gnl\|CDD\|270217	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily. This subfamily includes periplasmic binding domain of ATP-binding cassette transporter-like systems that serve as initial receptors in the ABC transport of amino acids and their derivatives in eubacteria. After binding their ligand with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The Abp proteins belong to the PBPI superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.79673e-109
LS483329.1\|SQF07139.1\|634390_637501_+\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|180917	PRK07279, dnaE, DNA polymerase III DnaE; Reviewed.	0
LS483329.1\|SQF07133.1\|627714_629979_+\|glycogen-phosphorylase	gnl\|CDD\|340853	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins. This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	0
LS483329.1\|SQF07151.1\|650410_652729_+\|DNA-helicase-II-/-ATP-dependent-DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
LS483329.1\|SQF07148.1\|646062_646836_+\|protein-B	gnl\|CDD\|369335	pfam07373, CAMP_factor, CAMP factor (Cfa). This family consists of several bacterial CAMP factor (Cfa) proteins which seem to be specific to Streptococcus species. The CAMP reaction is a synergistic lysis of erythrocytes by the interaction of an extracellular protein (CAMP factor) produced by some streptococcal species with the Staphylococcus aureus sphingomyelinase C (beta-toxin).	2.06796e-97
LS483329.1\|SQF07145.1\|643561_644203_+\|histidine-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	2.99371e-71
LS483329.1\|SQF07149.1\|647185_648439_-\|cation-diffusion-facilitator-transporter-family-protein	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	5.96295e-95
LS483329.1\|SQF07137.1\|633136_633835_-\|ABC-transporter-family-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	7.28377e-64

>LS483329.1|SQF07142.1|640376_640934_+|signal-peptidase-I
MVKRDFIRNILLLLIVIIGAILLRIFVFSTFKVSPETANTYLKSGDLVTIKKNIQPKYKDFVVYRVGKKDYVSRVIAVEGDSVTYMDDIFYLNNMVESQAYLEKMKAHYLNHAPFGTLYTDDFTVATITADKYQKVPKGKYLLLNDNRKNTNDSRRFGLINASQIKGLVTFRVLPLSDFGFVEVE
>LS483329.1|SQF07141.1|638656_640159_+|pyruvate-kinase
MNKRVKIVATLGPAVEIRGGKKYGEDGYWAGQLDVEESAKKIAELIEAGANVFRFNFSHGDHKEQGDRMATVRLAEEIARQKVGFLLDTKGPEMRTELFADDAKEFSYVTGEKIRVATTQGIQSTRDVIALNVAGSLDIYDEVEVGHTILIDDGKLGLKVIDKDIATRQFIVEVENDGIIAKQKGVNIPNTKIPFPALAERDNADIRFGLEQGLNFIAISFVRTAKDVEEVREICRETGNDHVQLFAKIENQQGIDNLDEIIEAADGIMIARGDMGIEVPFEMVPVFQKMIITKVNAAGKAVITATNMLETMTEKPRATRSEVSDVFNAVIDGTDATMLSGESANGKYPVESVRTMATIDRNAQTLLNEYGRLDSSAFPRTNKTDVIASAVKDATHSMDIKLVVTITETGNTARAISKFRPDADILAVTFDEKVQRALMINWGVIPVLAEKPASTDDMFEVAERVAVEAGLVQSGDNIVIVAGVPVGTGGTNTMRVRTVK
>LS483329.1|SQF07140.1|637580_638594_+|6-phosphofructokinase
MKRIAVLTSGGDAPGMNAAIRAVVRKAISEGMEVYGINRGYAGMVDGDIFPLGSKEVGDKISRGGTFLYSARYPEFAQLEGQLAGIEQLKKHGIEGVVVIGGDGSYHGAMRLTEHGFPAVGIPGTIDNDIAGTDYTIGFDTAVNTAVEAIDKLRDTSSSHGRTFVVEVMGRNAGDIALWAGIASGADQIIVPEEEFDIEKVASTIQYDFEHKGKNHHIIVLAEGVMSGEAFAQKLKEAGDKSDLRVTNLGHILRGGSPTARDRVIASWMGSHAVELLKEGKGGLAVGIHNEELVESPILGTAEEGALFSLTEEGKIIVNNPHKARLDFAALNRSLSQ
>LS483329.1|SQF07139.1|634390_637501_+|DNA-polymerase-III-subunit-alpha
MFAQLDTKTVYSFMDSLIDLNHYFERAKQFGYHTIGIMDKDNLYGAYHFIKGCQKNGLQPVLGLEVEILYQERQVLLNLIAQNTQGYHQLLKISTAKMSGKLHMDYLCQHLEGIAVIIPSKGWSDTLVVPFDYYIGVDQYTDLSHMDSKRQLIPLRTVRYFAQDDMETLHMLHAIRDNLSLAETPVVESDQELADCQQLTTFYQTHCPQALQNLEDLVSGIYYDFDTNLKLPHFNRDKSAKQELQELTEAGLKEKGLWKEPYQSRLLHELVIISDMGFDDYFLIVWDLLRFGRSKGYYMGMGRGSAAGSLVAYALNITGIDPVQHDLLFERFLNKERYSMPDIDIDLPDIYRSEFLRYVRNRYGSDHSAQIVTFSTFGPKQAIRDVFKRFGVPEYELTNLTKKIGFKDSLATVYEKSISFRQVINSRTEFQKAFAIAKRIEGNPRQTSIHAAGIVMSDDILTNHIPLKSGDDMMITQYDAHAVEANGLLKMDFLGLRNLTFVQKMQEKVAKDYGCQIDIAAIDLEDPQTLALFAKGDTKGIFQFEQNGAINLLKRIKPQRFEEIVATTSLNRPGASDYTTNFIKRREGQEKIDLIDPVIAPILEPTYGIMLYQEQVMQIAQVYAGFTLGKADLLRRAMSKKNLQEMQKMEEDFIASAKHLGRAEETARGLFKRMEKFAGYGFNRSHAFAYSALAFQLAYFKAHYPAVFYDIMMNYSSSDYITDALESDFQVAQVTINSIPYTDKIEGSKIYMGLKNIKGLPRDFAYWIIEQRPFNSVEDFLTRTPEKYQKKVFLEPLIKIGLFDCFEPNRKKILDNLDGLLVFVNELGSLFSDSSFSWVDAKDYSATEKYSLEQEIVGVGMSKHPLIDIAEKSTQTFTPISQLVKESEAVVLIQIDSIRIIRTKTSGQQMAFLSVNDTKKKLDVTLFPQEYAIYKDQLIEGEFYYLKGRIKERDHRLQMVCQQVQMAISQKYWLLVENHQFDSQISEILGAFPGTTPVVIHYQKNKETIALTKIQVHVTENLKEKLRPFVLKTVFR
>LS483329.1|SQF07138.1|633834_634206_-|GntR-family-transcriptional-regulator
MSWKFDEKSPIYAQIAQHVMMQIISQEIKSGDQLPTVREYAEIAGVNPNTMQRAFTELEREGMVYSQRTAGRFVTDDQKLIARKRREFAISELESFITNMTKMGFSHTEIIPVLTSFLKEDSQ
>LS483329.1|SQF07137.1|633136_633835_-|ABC-transporter-family-protein
MAHLLQLHHVSKSYREKKAIDDLTITIPNGKIIGLLGPNGSGKTTLIKLINGLLQPNKGEIVIDGYRPCVETKKIISYLPDTTYLNENMRIKDMLEFFSDFYSDFDKSKATSLLRDLELDPEDRFKTLSKGNKEKVQLILVMSRKARLYVLDEPIGGVDPAARDYILKTIINSYCENASVIISTHLISDIEPILDEVIFLKQGRLFLSGNADDLRQEYQQSIDSLFRETYKV
>LS483329.1|SQF07136.1|632341_633127_-|ABC-transporter-permease-protein
MFGKLLKYEFRSIGKWYFALNAFVIAIAAILSFTIKLFAQSNSDGLFGVLTNKMLPLTLGLTFGSLIAGSLLSTLLIIIKRFSKSVFGREGYLTLTLPVNSHQIILSKLLASFICSVFNTIILAFAIAIVIVPMFNINELLEGFFNSFKMDYFINMLTVLAYVLLSTFTSILLIYLSISIGQLFSNRRGLMAFIAYFILVILISVAATYVHSHIFNINTSADSFPFTEQKTIYLLILEQFIEMIMFYLATNFIIKNKLNLQ
>LS483329.1|SQF07135.1|631596_632211_+|membrane-protein
MTKRNSKAYILWQKIIKILGIIALIGTFFLAFWLYRLGILNDSNALKDLVQRYRLWGPFVFIVVQIIQIVFPVIPGGLTTVAGFLIFGPVTGFIYNYVGIIIGSIVLFLLVKTYGRKFILLFVNDKTFYKYERRLETPGYEKLFIFCMASPVSPADIMVMITGLTDMSLKRFVTILLITKPISIIGYSYLFIFGKDVISWFLQH
>LS483329.1|SQF07134.1|630235_630856_-|phage-protein
MTKKHLLTLLLISFFTSFLVACSTTKDKEPQPSDSEIITPRLHQAAHQDKRANFEKIKLATVDSSFTGGTSLEELISLFGEPSQHDPKTAGEVTIDAYTWQFDQVTLTVNLYQNSSIVKTISNFTFARELGLSQKEYQQLQKGMSYEDVKKILTEPDNYSQASSSDHQTLQAIWVSGLKTDTSGANISLVFENNQLTEMSQVGLEE
>LS483329.1|SQF07133.1|627714_629979_+|glycogen-phosphorylase
MTRFTEYVETKLGKSLTQASNEEIYLSLLNFVKEEASHKAKNSAKRKVYYISAEFLIGKLLSNNLINLGIYKDIKEELAAAGKSIAEVEDVELEPSLGNGGLGRLASCFIDSIASLGINGEGVGLNYHCGLFKQVFKHNEQEAEPNYWIEDQSWLVPTNISYDVPFKNFTLKSRLDRIDVLGYKRDTKNYLNLFDIEDVDYGLIKDGISFDKTEIAKNLTLFLYPDDSDKNGELLRIYQQYFMVSNAAQLIIDEAIERGSNLHDLADYAYVQINDTHPSMVIPELIRLLTEKHGFDFDEAVAVVKNMVGYTNHTILAEALEKWPTAYLNEVVPHLVTIIEKLDALVRSEVSDPAVQIIDESGRVHMAHMDIHFATSVNGVAALHTEILKNSELKAFYDLYPEKFNNKTNGITFRRWLEFANQDLADYIKELIGDEYLTDATKLEKLMAFADDKAVHAKLAEIKFNNKLALKRYLKDNKDIELDEHSIIDTQIKRFHEYKRQQMNALYVIHKYLEIKKGNLPKRKITVIFGGKAAPAYIIAQDIIHLILCLSELINNDPEVSPYLNVHLVENYNVTVAEHLIPATDISEQISLASKEASGTGNMKFMLNGALTLGTMDGANVEIAELAGMENIYTFGKDSDTIINLYATASYVAKDYYDNHPAIKAAVNFIISPELLAFGNEECLDRLYKELISKDWFMTLIDLEEYIEVKEKMLADYEDQDLWMTKVVHNIAKAGFFSSDRTIEQYNEDIWHSR
>LS483329.1|SQF07143.1|641109_642924_+|glucosamine-fructose-6-phosphate-aminotransferase
MCGIVGVVGNRNATDILMQGLEKLEYRGYDSAGIFVANANQTNLIKSVGRIADLRAKIGIDVAGSTGIGHTRWATHGQSTEDNAHPHTSQTGRFVLVHNGVIENYLHIKTEFLAGHDFKGQTDTEIAVHLIGKFVEEDKLSVLEAFKKALSIIEGSYAFALMDSQATDTIYVAKNKSPLLIGLGEGYNMVCSDAMAMIRETSEFMEIHDKELVILTKDKVTVTDYDGKELIRDSYTAELDLSDIGKGTYPFYMLKEIDEQPTVMRQLISTYADETGNVQVDPAIITSIQEADRLYILAAGTSYHAGFATKNMLEQLTDTPVELGVASEWGYHMPLLSKKPMFILLSQSGETADSRQVLVKANAMGIPSLTVTNVPGSTLSREATYTMLIHAGPEIAVASTKAYTAQIAALAFLAKAVGEANGKQEALDFNLVHELSLVAQSIEATLSEKDLVAEKVQALLTTTRNAFYIGRGNDYYVAMEAALKLKEISYIQCEGFAAGELKHGTISLIEEDTPVIALISSSQLVASHTRGNIQEVAARGAHVLTVVEEGLDREGDDIIVNKVHPFLAPIAMVIPTQLIAYYASLQRGLDVDKPRNLAKAVTVE
>LS483329.1|SQF07144.1|643119_643455_+|phosphonoacetate-hydrolase
MSLPNCLQCQSEYVYEDGLLLICPMCAFEWTPGEEATEEEGLVVLDSNGVRLSDGDTITVVKDLKVKGAPKDLKQGTRVKNIRLVEGDHNIDCKIDGFGAMKLKSEFVKKI
>LS483329.1|SQF07145.1|643561_644203_+|histidine-transporter-permease
MTYIQQVLPSLLDGALVTLQVFFIVIILSIPLGAILAFLMKIPFKPLQWFLTLYVWMMRGTPLLLQLIFFYYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKTAANRDATLAPMFIAGLIYLLLIGLVTIISKQVEKRFNYYQ
>LS483329.1|SQF07146.1|644212_644842_+|histidine-ABC-transporter-ATP-binding-protein
MLELKNISKQFGQKTIFDGFNLTVQDGEVLSLVGPSGGGKTTLLRMLAGLESIDSGQVFYNGEDVGIDHLENRNLLGFVFQDFQLFPHLTVLDNLTLSPAITMGKQKSDAKEKALDLLARLGLKEHAQVYPYSLSGGQKQRVALARAMMIDPQIIGYDEPTSALDPELRQTVEALIVQNREMGITQIVVTHDLVFAEAISDRIIRVNPK
>LS483329.1|SQF07147.1|644857_645694_+|polar-amino-acid-ABC-uptake-transporter-substrate-binding-protein
MIIKKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKCKGFDIDLAKEVFHQYGLKVNFQAINWDMKEAELNNGKIDVIWNGYSITKERQNKVAFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDANQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKEDKTLQAKINRAFRVLYQNGKFQAISEKWFGDDVATANIKS
>LS483329.1|SQF07148.1|646062_646836_+|protein-B
MKPKHLLCLSTVVAGLVLFSTMTHSVLADDASNPDTILMNNNQANLQRDALVQKLDEGHQQLEAIKHEAKGTDIEATVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKSFDVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQNALETALKS
>LS483329.1|SQF07149.1|647185_648439_-|cation-diffusion-facilitator-transporter-family-protein
MTQDPIANLKLARKGPIVSIIVYLLLSVAKLLAGYLLNASSLIADGFNNLSDIVGNVALLIGLHLASQPADANHKFGHWKIEDLSSLVTSFIMFLVGFQVLIHTIKSIFSGQQVDIDPLGAIVGIVSAFVMLGVYVFNKRLSKRVKSSALVAASKDNLADAVTSIGTSIAIIAASLHLPVIDHIAAMIITFFILKTAFDIFMESSFSLSDGFDSRHLKKYEKAILEIPKIVAVKSQRARTYGSNVYLDIVLEMNPDLSVYESHSITEKVEQLLSDQFSIYDIDIHVEPAMILEEEIFDNVAKKLYRYEKLILSKVPDYDHYIAKSFQLVDANGQTVNYEQFLNQEIYYPSNFNHFQIESISQKTMLVTYQLNGNQHTSIWRRHESWSLLFHQITPIAKRQLHHTLSYCKNVKILLIL
>LS483329.1|SQF07150.1|648558_649881_-|amino-acid-symporter
MIALVKLIDNLVWGPPLLILLVGTGIYLTSRLGLIQILKLPRAFKLIFSDDEGHGDISSFAALATALAATVGTGNIVGVATAIKSGGPGALFWMWVAAFFGMATKYAEGVLAIKYRTKDANGHISGGPMYYIVNGMGTKWKPLAILFAGSGILVALFGIGTFAQVNSITSSLGHSFGLSPQMVSIVLAIFVAAIIFGGIHSISKVAEKVVPFMAIFYILSSLAVIFSHYQQLLPVIRLVFQSAFTPTAAIGGFAGSLMKDAIQKGIARGVFSNESGLGSAPIAAAAAKTNESVEQGLISMTGTFIDTIIICTLTGLSILVTGQWTGQLEGAPLTQSAFATVFGNLGTFGLTFSLVLFAFTTILGWSYYGERCFEFLFGITHLTYFRIVFVLMVGLGGFLKLELIWVLADIVNGLMALPNLIALLALSPVVILETKHYFIK
>LS483329.1|SQF07151.1|650410_652729_+|DNA-helicase-II-/-ATP-dependent-DNA-helicase-PcrA
MNPLLNGMNDRQAQAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKFVNPWNILAITFTNKAAREMKERALSLNPATKDTLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLMKRILKQLNIDPKKWNERSILGTISNAKNDLLDEKGYEAQAADMYSQIVARCYKAYQEELRRSEALDFDDLIMMTLRLFDANPDVLAYYQQRYQYIHVDEYQDTNHAQYQLIKLLASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPDAKVVLLEENYRSTKKILQAANDVINNNRNRRPKKLWTQNADGEQLVYYRANDERDEAVFVASTISNMSQELGKNFKDFAVLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDLIAYLTIVANPADNISFERIVNEPKRGVGPGTLDKLRQFAYESDQSLLEAASNLLMSPLKGKAAQAIMDLANILGQLRQDLDQMSITDLAEALLEKTGYLDSLRLQNTLESHARIENIEEFLSVTKNFDESSASQEEDETGVDRLGRFLNDLALIADTDDSQAEAAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEDPDELEEERRLAYVGITRAEEVLFMTNANTRTLFGKSSYNRPTRFLKEISEELLSYKGLARPAQSSFGVRFSTETHTQFGQGMSLSEALQARKAQAQVRQSAQPMQAHTIPSASTSSVLSFGSNSSVEEVTWQIGDIAHHKKWGDGTVLEVSGSGKTMELKIKFPEVGLKKLLASVAPIEKK
>LS483329.1|SQF07152.1|653091_653340_+|transglycosylase-associated-family-protein
MGLIWTLIVGALIGVIAGALTKKGGSMGWIANIAAGLVGSSVGQALLGSWGPSLAGMSLIPSVIGAVIVVMITSFVLNKTNN

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Crispr_ID: LS483329_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS483329_4

821266-821829

TypeII

II-A

Consensus_repeat	Method
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	CRISPRCasFinder
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	CRT
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	PILER-CR

8 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of LS483329_4

>merge|LS483329|4|821266-821829|CRISPRCasFinder,CRT,PILER-CR
GAATGGAGACCATTCAAGACAGCATAGCTCTAAAACCTTTAGGGCTTACGGTAGTTGGGATGAGTCGTTTTGGGACCATTCAAAACAGCATAGCTCTAAAACAAATACTGATGCGGTTGCCATCCTTATCAGGTTTTGGGACCATTCAAAACAGCATAGCTCTAAAACGATGTCTTTGTCTGTGAAATAGGCCTCTAAGTTTTGGGACCATTCAAAACAGCATAGCTCTAAAACTCACGTATGGTATTTCAATCTTGTTTGGACGTTTTGGGACCATTCAAAACAGCATAGCTCTAAAACTGTGATAGTTGCACCTTTGGCATCTGCAATGTTTTGGGACTATTCAAAACAGCATAGCTCTAAAACTACAGATATTAATAGCACACTCGAAGCGATGTTTTGGGACCATTCAAAACAGCATAGCTCTAAAACGCTAGCTTGCTCTCACCGTTGCTATTGTCAGTTTTGGGACCATTCAAAACAGCATAGCTCTAAAACGCAGCTCTAATCACTGTCGGATTATCACTAGTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC

>LS483329|4|3|821266-821829|CRISPRCasFinder
GAATGGAGACCATTCAAGACAGCATAGCTCTAAAAC	CTTTAGGGCTTACGGTAGTTGGGATGAGTC
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	AAATACTGATGCGGTTGCCATCCTTATCAG
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	GATGTCTTTGTCTGTGAAATAGGCCTCTAA
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	TCACGTATGGTATTTCAATCTTGTTTGGAC
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	TGTGATAGTTGCACCTTTGGCATCTGCAAT
GTTTTGGGACTATTCAAAACAGCATAGCTCTAAAAC	TACAGATATTAATAGCACACTCGAAGCGAT
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	GCTAGCTTGCTCTCACCGTTGCTATTGTCA
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	GCAGCTCTAATCACTGTCGGATTATCACTA
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC

>LS483329|4|1|821266-821829|CRT
GAATGGAGACCATTCAAGACAGCATAGCTCTAAAAC	CTTTAGGGCTTACGGTAGTTGGGATGAGTC
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	AAATACTGATGCGGTTGCCATCCTTATCAG
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	GATGTCTTTGTCTGTGAAATAGGCCTCTAA
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	TCACGTATGGTATTTCAATCTTGTTTGGAC
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	TGTGATAGTTGCACCTTTGGCATCTGCAAT
GTTTTGGGACTATTCAAAACAGCATAGCTCTAAAAC	TACAGATATTAATAGCACACTCGAAGCGAT
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	GCTAGCTTGCTCTCACCGTTGCTATTGTCA
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	GCAGCTCTAATCACTGTCGGATTATCACTA
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC

>LS483329|4|2|821332-821829|PILER-CR
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	AAATACTGATGCGGTTGCCATCCTTATCAG
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	GATGTCTTTGTCTGTGAAATAGGCCTCTAA
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	TCACGTATGGTATTTCAATCTTGTTTGGAC
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	TGTGATAGTTGCACCTTTGGCATCTGCAAT
GTTTTGGGACTATTCAAAACAGCATAGCTCTAAAAC	TACAGATATTAATAGCACACTCGAAGCGAT
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	GCTAGCTTGCTCTCACCGTTGCTATTGTCA
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	GCAGCTCTAATCACTGTCGGATTATCACTA
GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
LS483329.1\|SQF07326.1\|829770_830523_-\|oleoyl-[acyl-carrier-protein]-hydrolase	unknown	unknown	gnl\|CDD\|226401
LS483329.1\|SQF07323.1\|823790_827897_-\|CRISPR-associated-protein,-Csn1-family	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
LS483329.1\|SQF07314.1\|814412_814904_-\|PTS-system-mannose/fructose-family-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|225976
LS483329.1\|SQF07315.1\|814922_815348_-\|PTS-system-mannose-specific-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|225446
LS483329.1\|SQF07311.1\|810977_812627_-\|two-component-sensor-kinase	unknown	unknown	gnl\|CDD\|225519
LS483329.1\|SQF07329.1\|832490_833846_-\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|237670
LS483329.1\|SQF07324.1\|828374_829007_-\|membrane-protein	unknown	unknown	gnl\|CDD\|226884
LS483329.1\|SQF07310.1\|810185_810974_-\|response-regulator	unknown	unknown	gnl\|CDD\|227095
LS483329.1\|SQF07320.1\|821931_822594_-\|CRISPR-associated-family-protein	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
LS483329.1\|SQF07322.1\|822921_823791_-\|cytoplasmic-protein	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
LS483329.1\|SQF07319.1\|818791_820624_-\|GTP-binding-protein-LepA	unknown	unknown	gnl\|CDD\|235462
LS483329.1\|SQF07328.1\|831725_832367_-\|acetyltransferase-GNAT-Family	unknown	unknown	unknown
LS483329.1\|SQF07318.1\|817326_818607_-\|streptococcal-collagen-like-protein-(B)-SclB	unknown	unknown	gnl\|CDD\|237171
LS483329.1\|SQF07325.1\|829006_829771_-\|haloacid-dehalogenase-like-hydrolase	unknown	unknown	gnl\|CDD\|319832
LS483329.1\|SQF07316.1\|815554_816574_-\|hypothetical-membrane-spanning-protein	unknown	unknown	gnl\|CDD\|225411
LS483329.1\|SQF07317.1\|816703_817141_-\|methionine-sulfoxide-reductase-B	unknown	unknown	gnl\|CDD\|234692
LS483329.1\|SQF07313.1\|813586_814396_-\|PTS-system,-mannose-specific-IIC-component	unknown	unknown	gnl\|CDD\|226238
LS483329.1\|SQF07327.1\|830532_831729_-\|coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
LS483329.1\|SQF07312.1\|812762_813590_-\|phospotransferase-system-(PTS),-enzyme-II-component-D	unknown	unknown	gnl\|CDD\|226239
LS483329.1\|SQF07321.1\|822583_822895_-\|CRISPR-associated-Cas2-family-protein	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043

Protein	Function_ID	Function_description	E-value
LS483329.1\|SQF07326.1\|829770_830523_-\|oleoyl-[acyl-carrier-protein]-hydrolase	gnl\|CDD\|226401	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism].	1.17846e-104
LS483329.1\|SQF07323.1\|823790_827897_-\|CRISPR-associated-protein,-Csn1-family	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
LS483329.1\|SQF07314.1\|814412_814904_-\|PTS-system-mannose/fructose-family-transporter-subunit-IIB	gnl\|CDD\|225976	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism].	8.80769e-55
LS483329.1\|SQF07315.1\|814922_815348_-\|PTS-system-mannose-specific-transporter-subunit-IIA	gnl\|CDD\|225446	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism].	3.64459e-31
LS483329.1\|SQF07311.1\|810977_812627_-\|two-component-sensor-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	3.76943e-77
LS483329.1\|SQF07329.1\|832490_833846_-\|phosphoglucosamine-mutase	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
LS483329.1\|SQF07324.1\|828374_829007_-\|membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	2.32422e-86
LS483329.1\|SQF07310.1\|810185_810974_-\|response-regulator	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	5.79862e-82
LS483329.1\|SQF07320.1\|821931_822594_-\|CRISPR-associated-family-protein	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	5.55445e-120
LS483329.1\|SQF07322.1\|822921_823791_-\|cytoplasmic-protein	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	4.67971e-131
LS483329.1\|SQF07319.1\|818791_820624_-\|GTP-binding-protein-LepA	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
LS483329.1\|SQF07318.1\|817326_818607_-\|streptococcal-collagen-like-protein-(B)-SclB	gnl\|CDD\|237171	PRK12678, PRK12678, transcription termination factor Rho; Provisional.	2.09518e-09
LS483329.1\|SQF07325.1\|829006_829771_-\|haloacid-dehalogenase-like-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.84127e-128
LS483329.1\|SQF07316.1\|815554_816574_-\|hypothetical-membrane-spanning-protein	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	2.72474e-102
LS483329.1\|SQF07317.1\|816703_817141_-\|methionine-sulfoxide-reductase-B	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	1.39962e-81
LS483329.1\|SQF07313.1\|813586_814396_-\|PTS-system,-mannose-specific-IIC-component	gnl\|CDD\|226238	COG3715, ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism].	3.81104e-76
LS483329.1\|SQF07327.1\|830532_831729_-\|coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
LS483329.1\|SQF07312.1\|812762_813590_-\|phospotransferase-system-(PTS),-enzyme-II-component-D	gnl\|CDD\|226239	COG3716, ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID [Carbohydrate transport and metabolism].	1.55707e-109
LS483329.1\|SQF07321.1\|822583_822895_-\|CRISPR-associated-Cas2-family-protein	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.09684e-53

>LS483329.1|SQF07319.1|818791_820624_-|GTP-binding-protein-LepA
MNSQDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRHEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGDVDAPLQALIFDSVYDAYRGVILQVRIVNGIVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYVAASIKTVADTRVGDTVTLANNPAKEALHGYKQMNPMVFAGIYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVHTTDEDMIEVSNPSEFPDPTRVAFIEEPYVKAQIMVPQEFVGAVMELSQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYDMSEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKIIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDTKK
>LS483329.1|SQF07318.1|817326_818607_-|streptococcal-collagen-like-protein-(B)-SclB
MNKTKQNKTKQNKTKQNKTKHSLLCRYGLTSAAALLLTFGGASAVKADSQGIRETQEALQGVRSKFPKLTKYIPNDNISDKTPIYQYLQELERNLDSYLSILDERMDHLKGDRGETGPAGPAGPAGPAGPTGPTGPTGPTGPTGPTGPRGQDGDRGEAGPAGPRGKDGEAGAQGPMGPAGPQGPRGDKGETGDKGDQGPAGKDGERGPVGPAGKDGQDGQDGLPGKDGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQDGQDGLPGKDGKDGQNGKDGLPGKDGKDGQDGQDGLPGKDGKDGQPGKPAPKTPEVPQKPDTAPHTPKTPQIPGQSKDVTPAPQNPSNRGLNKPQTQGGNQLAKTPAAHDTHRQLPATGETTNPFFTAAAVAIMTTAGVVAVAKRQENN
>LS483329.1|SQF07317.1|816703_817141_-|methionine-sulfoxide-reductase-B
METSEELKQRIGDLSYEVTQHAATESPFTGEYDDFFEKGIYVDIVSGEVLFSSLDKFNSGCGRPAFSKPIENRMVTNHDDSSYGMRRVEVKSREAGSHLGHVFSDGPKEAGGLRYCINSAALKFIPYDQMEKEGYAQWLTLFDET
>LS483329.1|SQF07316.1|815554_816574_-|hypothetical-membrane-spanning-protein
MSTHLRKLPGLLLCLLLALPAWYLGCLFPIIGAPVFAILLGMLLALFYHHRDKTKEGISFTSKYILQTAVVLLGFGLNLTQVMAVGMQSLPIIVSTIATALLVAYGSQKWLRLDVNTATLVGVGSSICGGSAIAATAPVIKAKDDEIAKAISVIFLFNMLAALLFPSLGQLLGLSNEGFAIFAGTAVNDTSSVTATATAWDAIHHSNTLDGATIVKLTRTLAILPITLGLSLYQAKKEHDIVTEEGFSLRKLFPRFILFFLLASLITTLMTSLGVSADSFHSLKTLSKFFIVMAMAAIGLNTNLVKLIKTGGQAILLGAICWVAITLVSLAMQLSLGIW
>LS483329.1|SQF07315.1|814922_815348_-|PTS-system-mannose-specific-transporter-subunit-IIA
MKRKFLIGSHGRLASGLQSSIDILAGMGQALETIDAYVDDSDYTSQIDDFIAGVAADEQGLIFTDLLGGSVNQKMVTAVMNSGKDNIFLITNSNLATLLSLVFLKPGEALTKDEIVTVINESQVQLVDLVPETNSEDDFFD
>LS483329.1|SQF07314.1|814412_814904_-|PTS-system-mannose/fructose-family-transporter-subunit-IIB
MITQIRVDDRLIHGQVAVVWTKELNAPLLVVANDEAAKNEITQMTLKMAVPNGMKLLIRSVEDSIKLFNDPRATDKRIFVIVNSVKDACAIAKEVPDLEAVNVANVGRFDKSDPASKVKVTPSLLLNPEEMAAAKELVSLPELDVFNQVLPSNTKVHLSQLVN
>LS483329.1|SQF07313.1|813586_814396_-|PTS-system,-mannose-specific-IIC-component
MLVPATMAALAVLICFGGNYLTGQSMMERPLVVGLVTGLLLGDMKVGILMGASLEALFLGNVNIGGVIAAEPVTATAMATTFTIISHIDQKAAMTLAVPIGMLAAFVVMFLKNVFMNIFAPMVDKAAAANHQGKLVMLHYGTWIIYYLIIASISFIGILVGSGPVNAFVEHIPQNLMNGLSAAGGLLPAVGFAMLMKLLWTNKLAVFYLLGFVLTAYLKLPAVAVAALGAVICVISSQRDLELDAITRGAISKQTTFDSKESEEEDFFA
>LS483329.1|SQF07312.1|812762_813590_-|phospotransferase-system-(PTS),-enzyme-II-component-D
MTSQDNLTKEDRKMLRSVFWRSWTMNASRTGATQYHAVGVIYTLLPVINRFYKTDKDKAEALVRHTTWFNATMHINNFIMGLVASMEKKNSEDPDFDASAITAVKASLMGPISGVGDSFFWGILRVIAAGIGISLASAGSAMGAVVFLLLYNIPAFIIHYYSLYGGYSVGAGFIKKLYESGGIKIVTKTSSMLGLMMVGSMTASNVKFKTILTVAAKGAKEAASIQDYLDQLFIGIVPLMVTLAAFWLLRKKVNINWIMFGIMFLGIILGLLGIC
>LS483329.1|SQF07311.1|810977_812627_-|two-component-sensor-kinase
MRGEQVEEHFKKQLQDDISRHFSYQSLMLSLLLIGLFIIFSLAPQQLGLYRDINATATRYHRLISKQEALLDELGKNSLLPFLNKNLSTADLSKHYFHLRHSSQTSPELLLFSPNQGLLFASNPHLGNVFSKSVYIQEVLRAAHPPKTLFKVAMDSEDGHYLMIIKPMIDQNQLKGYAFLVMSGKDFLHPTKTLTSELVIADKLDNTFTFSNREFIASSLDKINSQYLHHYFVFQDNRAFITRKVALQGGLWLYMYRPLIPMVSVMLFSLISSAVIFVILQRKSSGLANRIAAKNSRAINQMVRDMSAISRQEKRRIDLESQDEFQYLSDQINQMVERLQQLHDKTLDLETQKLLFEKRMLEAQFNPHFLYNTLETILITSHYDSALTEKIVIQLTKLLRYSLTDSSKPVLLKDDLSVIESYLVINQVRFEELQYSINLSPDLDSLAMPKLFLLPLIENAIKYGLKERHDVKINIACYYQDDHIIFSVRDNGSGIDAHHQKVIREQLEAGESHHGLINSYRRLKYHFSEVSLVFDQGDKQFNVSYHVKE
>LS483329.1|SQF07310.1|810185_810974_-|response-regulator
MYKLVIIEDEHIIRKWLRYAIDYKALDILVIGEAKDGKEGAVLIKESQPDIVLTDINMPIMTAFDMFEATKDQTYAKIILSGYADFPNARSAIHYGVLEFLTKPIEKAALWECLQTIIAKIEKQKGSNQKTDACVYIPLPQMTDQIPEVVKDILEWVHAHFQDKISTSRLAHDLGYSESYIYQNIKKHLQMPLSDYINQYRINQAIQLMQQEPDLMVYEIAQAVGIYDYRYFDRVFKKYLGQTVKAFKEEHFMKDTDRSKPC
>LS483329.1|SQF07320.1|821931_822594_-|CRISPR-associated-family-protein
MNLNFSLLDEPIPLRGGTILVLEDVCVFSKIVQYCYKYEEDSELKFFDHKMKTIKESEIMLVTDILGFDVNSSTILKLIHADLESQFNEKPEVKSMIDKLVATITELIVFECLENELDLEYDEITILELIKSLGVKVETQSDTIFEKCLEILQIFKYLTKKKLVVFVNSGAFLTKEEVASLQEYISLTNLTVLFLEPRELYDFPQYILDEDYFLITKNMV
>LS483329.1|SQF07321.1|822583_822895_-|CRISPR-associated-Cas2-family-protein
MFDMPTDTAEERKAYRKFRKFLLSEGFIMHQFSIYSKLLLNNTANNAMIGRLREHNPNKGNITLLTVTEKQFARMIYLHGERNNCIANSDERLVFLGEAFDES
>LS483329.1|SQF07322.1|822921_823791_-|cytoplasmic-protein
MAGWRTVVVNTHSKLSYKNNHLIFKDAYKTELIHLSEIDILLLETTDIVLSTMLVKRLVDENVLVIFCDDKRLPTAMLMPFYGRHDSSLQLGKQMSWSETVKSQVWTTIIAQKILNQSCYLGACSYFEKSQSIMDLYHGLENFDPSNREGHAARIYFNTLFGNDFSRDLEHPINAGLDYGYTLLLSMFAREVVVSGCMTQFGLKHANQFNQFNFASDIMEPFRPLVDKIVYENRNQPFPKIKRELFTLFSDTFSYNDKEMYLTNIISDYTKKVVKALNNEGKGVPEFRI
>LS483329.1|SQF07323.1|823790_827897_-|CRISPR-associated-protein,-Csn1-family
MDKKYSIGLDIGTNSVGWAVITDDYKVPSKKFKVLGNTDRHSIKKNLIGALLFDSGETAEATRLKRTARRRYTRRKNRICYLQEIFSNEMAKVDDSFFHRLEESFLVEEDKKHERHPIFGNIVDEVAYHEKYPTIYHLRKKLADSTDKADLRLIYLALAHMIKFRGHFLIEGDLNPDNSDVDKLFIQLVQTYNQLFEENPINASRVDAKAILSARLSKSRRLENLIAQLPGEKRNGLFGNLIALSLGLTPNFKSNFDLAEDAKLQLSKDTYDDDLDNLLAQIGDQYADLFLAAKNLSDAILLSDILRVNSEITKAPLSASMIKRYDEHHQDLTLLKALVRQQLPEKYKEIFFDQSKNGYAGYIDGGASQEEFYKFIKPILEKMDGTEELLAKLNREDLLRKQRTFDNGSIPHQIHLGELHAILRRQEDFYPFLKDNREKIEKILTFRIPYYVGPLARGNSRFAWMTRKSEETITPWNFEEVVDKGASAQSFIERMTNFDKNLPNEKVLPKHSLLYEYFTVYNELTKVKYVTEGMRKPEFLSGEQKKAIVDLLFKTNRKVTVKQLKEDYFKKIECFDSVEISGVEDRFNASLGTYHDLLKIIKDKDFLDNEENEDILEDIVLTLTLFEDREMIEERLKTYAHLFDDKVMKQLKRRRYTGWGRLSRKLINGIRDKQSGKTILDFLKSDGFANRNFMQLIHDDSLTFKEDIQKAQVSGQGDSLHEHIANLAGSPAIKKGILQTVKVVDELVKVMGRHKPENIVIEMARENQTTQKGQKNSRERMKRIEEGIKELGSDILKEYPVENTQLQNEKLYLYYLQNGRDMYVDQELDINRLSDYDVDHIVPQSFIKDDSIDNKVLTRSDKNRGKSDNVPSEEVVKKMKNYWKQLLNAKLITQRKFDNLTKAERGGLSELDKAGFIKRQLVETRQITKHVAQILDSRMNTKYDENDKLIREVKVITLKSKLVSDFRKDFQFYKVREINNYHHAHDAYLNAVVGTALIKKYPKLESEFVYGDYKVYDVRKMIAKSEQEIGKATAKYFFYSNIMNFFKTEITLANGEIRKRPLIETNGETGEIVWDKGRDFATVRKVLSMPQVNIVKKTEVQTGGFSKESILPKRNSDKLIARKKDWDPKKYGGFDSPTVAYSVLVVAKVEKGKSKKLKSVKELLGITIMERSSFEKNPIDFLEAKGYKEVRKDLIIKLPKYSLFELENGRKRMLASAGELQKGNELALPSKYVNFLYLASHYEKLKGSPEDNEQKQLFVEQHKHYLDEIIEQISEFSKRVILADANLDKVLSAYNKHRDKPIREQAENIIHLFTLTNFGAPAAFIYFDTTIGRNRYKSIKEVLDATLIHQSITGLYETRIDLSQLGGD
>LS483329.1|SQF07324.1|828374_829007_-|membrane-protein
MVENTKLLCSWVWLLALAILITIYSTWLWYPLEVDHLKLEQVVFMSKDAILHNYNGLLNYLTNPFVTRLEFANFHSSADGLKHFADVKWLFHLTQVVFLGLLYSTLKTFTQRLKTKRFWLLQKPLILAALFPLMIGLMASFIGFEHFFTLFHQVLFVGDSSWLFDPLKDPVIWILPEVFFLHCFLFFMIVYEIILWSLVGLARWQRLNVE
>LS483329.1|SQF07325.1|829006_829771_-|haloacid-dehalogenase-like-hydrolase
MPYKGYLIDLDGTIYQGKNRIPAGERFIKRLQERGIPYLLVTNNTTRTPEMVQSMLANQFHVETGIETIYTATMATVDYMNDMNRGKTAYVIGETGLKSAIAAAGYVEELENPAYVVVGLDSQVTYEMLAIATLAIQKGALFIGTNPDLNIPTERGLMPGAGALNALLEAATRVKPVFIGKPNAIIMNKSLEVLGIQRSEAVMVGDNYLTDIMAGIQNDIATILVTTGFTRPEEVPTLPIQPDHVLSSLDEWRL
>LS483329.1|SQF07326.1|829770_830523_-|oleoyl-[acyl-carrier-protein]-hydrolase
MGLSYQEELTLPFELCDVKSDIKLPLLLDYCLMVSGRQSAQLGRSNNNLLVDYKLVWIVTDYEITIHRLPHFQETITIETKALSYNKFFCYRQFYIYDQEGDLLVDILAYFALLNPDTRKVATIPEDLVAPFKTDFVKKLYRVPKMPLLEQSIDRDYYVRYFDIDMNGHVNNSKYLDWMYDVLGCAFLKTHQPLKITLKYVKEVSPGGQITSSYHLDQLTSYHQIISDGQLNAQAMIEWRAIKPIESETD
>LS483329.1|SQF07327.1|830532_831729_-|coproporphyrinogen-III-oxidase
MRNQGKWFIHRNILSSKWYNKTMSKKPTSAYVHIPFCTQICYYCDFSKVFIQNQPVDAYLKALIQEFDSYGIRDLKTLYIGGGTPTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRISLGVQTFNNKQLKQIGRSHNEEQIYSTITNLKAAGFHNISIDLIYALPGQTLDQVKENVAKALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPIQHYLKAVEAGNARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGMSFEERYGNIVRELQNQGLLVKDDAFVRMTKKGLFLGDSVAERFILD
>LS483329.1|SQF07328.1|831725_832367_-|acetyltransferase-GNAT-Family
MTKQQIEKLADLLPPFAATLYLDMIPEFQEGYASYVYQTQKEDTQNRRIKQLTKNFERLLDTPSFYVMPVTRKTAEQLLADKGLAYHLLSTVAANQVFAAAVNEDQTLFQVLRNGARVAFVILQEKGEFLEMTLGILETVTENEVPAAIVEAVQTYLLADMQEKLPSLSIMVSQESSKLFYQEQGFVLLAKGCKPGNENDSDVCQLVKYFSKP
>LS483329.1|SQF07329.1|832490_833846_-|phosphoglucosamine-mutase
MGKYFGTDGVRGEANVELTPELAFKLGRFGGYVLSQHETERPKVFVARDTRISGEMLESALIAGLLSVGIEVYKLGVLATPGVSYLVRTEKASAGVMISASHNPALDNGIKFFGNDGFKLADDQELEIEALLDAPEDTLPRPSAEGLGTLVDYPEGLRKYEKFLVTTGTDLSGMTVALDTANGAASVSARDVFLDLNAEIAVIGEKPNGLNINDGVGSTHPEQLQELVKETGADLGLAFDGDSDRLIAVDETGEIVDGDRIMFIIGKYLSEKGLLAHNTIVTTVMSNLGFHKALDKQGINKAITAVGDRYVVEEMRSSGYNLGGEQSGHVIIMDYNTTGDGQLTAIQLAKVMKETGKSLSELAAEVTIYPQKLVNIRVENSMKDRAMEVPAIANIIAKMEDEMAGNGRILVRPSGTEPLLRVMAEAPTDAEVDYYVDTIADVVRTEIGCDN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LS483329_4	4.1\|821302\|30\|LS483329\|CRISPRCasFinder,CRT	821302-821331	30	MK448795	Streptococcus phage Javan527, complete genome	42821-42850	0	1.0
LS483329_4	4.1\|821302\|30\|LS483329\|CRISPRCasFinder,CRT	821302-821331	30	MK448941	Streptococcus phage Javan446, complete genome	39237-39266	0	1.0
LS483329_4	4.1\|821302\|30\|LS483329\|CRISPRCasFinder,CRT	821302-821331	30	MK448962	Streptococcus phage Javan496, complete genome	27648-27677	0	1.0
LS483329_4	4.2\|821368\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821368-821397	30	MK448795	Streptococcus phage Javan527, complete genome	43753-43782	0	1.0
LS483329_4	4.2\|821368\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821368-821397	30	MK448962	Streptococcus phage Javan496, complete genome	29608-29637	0	1.0
LS483329_4	4.2\|821368\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821368-821397	30	MK448958	Streptococcus phage Javan486, complete genome	37746-37775	0	1.0
LS483329_4	4.3\|821434\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821434-821463	30	MK448767	Streptococcus phage Javan467, complete genome	13110-13139	0	1.0
LS483329_4	4.3\|821434\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821434-821463	30	MK448771	Streptococcus phage Javan481, complete genome	12824-12853	0	1.0
LS483329_4	4.3\|821434\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821434-821463	30	NC_004586	Streptococcus pyogenes phage 315.3, complete genome	13215-13244	0	1.0
LS483329_4	4.3\|821434\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821434-821463	30	MK448969	Streptococcus phage Javan514, complete genome	14546-14575	0	1.0
LS483329_4	4.3\|821434\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821434-821463	30	MK448964	Streptococcus phage Javan502, complete genome	13089-13118	0	1.0
LS483329_4	4.3\|821434\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821434-821463	30	MK448943	Streptococcus phage Javan450, complete genome	13110-13139	0	1.0
LS483329_4	4.3\|821434\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821434-821463	30	MK448972	Streptococcus phage Javan520, complete genome	12462-12491	0	1.0
LS483329_4	4.3\|821434\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821434-821463	30	MK448763	Streptococcus phage Javan451, complete genome	13240-13269	0	1.0
LS483329_4	4.3\|821434\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821434-821463	30	MK448786	Streptococcus phage Javan509, complete genome	13110-13139	0	1.0
LS483329_4	4.3\|821434\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821434-821463	30	MK448774	Streptococcus phage Javan487, complete genome	11660-11689	0	1.0
LS483329_4	4.3\|821434\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821434-821463	30	MK448963	Streptococcus phage Javan498, complete genome	8732-8761	0	1.0
LS483329_4	4.3\|821434\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821434-821463	30	MK448773	Streptococcus phage Javan485, complete genome	14546-14575	0	1.0
LS483329_4	4.3\|821434\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821434-821463	30	MK448777	Streptococcus phage Javan491, complete genome	13122-13151	0	1.0
LS483329_4	4.4\|821500\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821500-821529	30	MK448960	Streptococcus phage Javan492, complete genome	2587-2616	0	1.0
LS483329_4	4.4\|821500\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821500-821529	30	MK448762	Streptococcus phage Javan447, complete genome	2668-2697	0	1.0
LS483329_4	4.4\|821500\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821500-821529	30	MK448793	Streptococcus phage Javan523, complete genome	2664-2693	0	1.0
LS483329_4	4.4\|821500\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821500-821529	30	MK448954	Streptococcus phage Javan476, complete genome	2668-2697	0	1.0
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448952	Streptococcus phage Javan472, complete genome	32137-32166	0	1.0
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448959	Streptococcus phage Javan488, complete genome	33002-33031	0	1.0
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	NC_004587	Streptococcus prophage 315.4, complete genome	31580-31609	0	1.0
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	NC_003157	Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome	32850-32879	0	1.0
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448766	Streptococcus phage Javan465, complete genome	32531-32560	0	1.0
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448962	Streptococcus phage Javan496, complete genome	22785-22814	0	1.0
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448977	Streptococcus phage Javan530, complete genome	31485-31514	0	1.0
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448949	Streptococcus phage Javan460, complete genome	33662-33691	0	1.0
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448958	Streptococcus phage Javan486, complete genome	31911-31940	0	1.0
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448777	Streptococcus phage Javan491, complete genome	27007-27036	0	1.0
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448788	Streptococcus phage Javan511, complete genome	31485-31514	0	1.0
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448957	Streptococcus phage Javan484, complete genome	36969-36998	0	1.0
LS483329_4	4.6\|821632\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821632-821661	30	MK448970	Streptococcus phage Javan516, complete genome	8282-8311	0	1.0
LS483329_4	4.6\|821632\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821632-821661	30	MK448953	Streptococcus phage Javan474, complete genome	6869-6898	0	1.0
LS483329_4	4.6\|821632\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821632-821661	30	MK448945	Streptococcus phage Javan454, complete genome	7453-7482	0	1.0
LS483329_4	4.6\|821632\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821632-821661	30	MK448941	Streptococcus phage Javan446, complete genome	8216-8245	0	1.0
LS483329_4	4.6\|821632\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821632-821661	30	MK448957	Streptococcus phage Javan484, complete genome	7849-7878	0	1.0
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448767	Streptococcus phage Javan467, complete genome	1215-1249	1	0.971
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448771	Streptococcus phage Javan481, complete genome	1215-1249	1	0.971
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448942	Streptococcus phage Javan448, complete genome	1215-1249	1	0.971
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	NC_004586	Streptococcus pyogenes phage 315.3, complete genome	1320-1354	1	0.971
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448964	Streptococcus phage Javan502, complete genome	1215-1249	1	0.971
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448943	Streptococcus phage Javan450, complete genome	1215-1249	1	0.971
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448972	Streptococcus phage Javan520, complete genome	1215-1249	1	0.971
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448672	Streptococcus phage Javan117, complete genome	1484-1518	1	0.971
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448786	Streptococcus phage Javan509, complete genome	1215-1249	1	0.971
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448849	Streptococcus phage Javan128, complete genome	1484-1518	1	0.971
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448774	Streptococcus phage Javan487, complete genome	1215-1249	1	0.971
LS483329_4	4.1\|821302\|30\|LS483329\|CRISPRCasFinder,CRT	821302-821331	30	NC_009819	Streptococcus phage P9, complete genome	36586-36615	1	0.967
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	NC_004585	Streptococcus prophage 315.2, complete genome	32459-32488	1	0.967
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448966	Streptococcus phage Javan508, complete genome	32314-32343	1	0.967
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448952	Streptococcus phage Javan472, complete genome	1221-1255	2	0.943
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448675	Streptococcus phage Javan129, complete genome	1158-1192	2	0.943
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448850	Streptococcus phage Javan132, complete genome	1158-1192	2	0.943
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448779	Streptococcus phage Javan497, complete genome	32035-32069	2	0.943
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448795	Streptococcus phage Javan527, complete genome	38813-38847	2	0.943
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448944	Streptococcus phage Javan452, complete genome	35847-35881	2	0.943
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448968	Streptococcus phage Javan512, complete genome	32035-32069	2	0.943
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	NC_004584	Streptococcus prophage 315.1, complete genome	31879-31913	2	0.943
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448797	Streptococcus phage Javan531, complete genome	32035-32069	2	0.943
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448978	Streptococcus phage Javan532, complete genome	31773-31807	2	0.943
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448785	Streptococcus phage Javan507, complete genome	31774-31808	2	0.943
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	NC_004589	Streptococcus prophage 315.6, complete genome	32132-32166	2	0.943
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448792	Streptococcus phage Javan521, complete genome	32286-32320	2	0.943
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448962	Streptococcus phage Javan496, complete genome	23435-23469	2	0.943
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448946	Streptococcus phage Javan456, complete genome	36806-36840	3	0.914
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448767	Streptococcus phage Javan467, complete genome	27766-27800	3	0.914
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448771	Streptococcus phage Javan481, complete genome	27288-27322	3	0.914
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448942	Streptococcus phage Javan448, complete genome	18719-18753	3	0.914
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448775	Streptococcus phage Javan489, complete genome	35189-35223	3	0.914
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	NC_004586	Streptococcus pyogenes phage 315.3, complete genome	27871-27905	3	0.914
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448794	Streptococcus phage Javan525, complete genome	32315-32349	3	0.914
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448964	Streptococcus phage Javan502, complete genome	27576-27610	3	0.914
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448943	Streptococcus phage Javan450, complete genome	27766-27800	3	0.914
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448953	Streptococcus phage Javan474, complete genome	36910-36944	3	0.914
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	M19348	Streptococcus pyogenes phage H4489A hyaluronidase (hylP) and hypothetical protein genes, complete cds	808-842	3	0.914
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448786	Streptococcus phage Javan509, complete genome	27766-27800	3	0.914
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448774	Streptococcus phage Javan487, complete genome	26120-26154	3	0.914
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448772	Streptococcus phage Javan483, complete genome	33089-33123	3	0.914
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448963	Streptococcus phage Javan498, complete genome	23388-23422	3	0.914
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448765	Streptococcus phage Javan459, complete genome	32313-32347	3	0.914
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448954	Streptococcus phage Javan476, complete genome	32112-32146	3	0.914
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448950	Streptococcus phage Javan464, complete genome	32978-33012	3	0.914
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448976	Streptococcus phage Javan528, complete genome	32333-32367	3	0.914
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448951	Streptococcus phage Javan470, complete genome	32464-32498	3	0.914
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448955	Streptococcus phage Javan478, complete genome	34625-34654	3	0.9
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448970	Streptococcus phage Javan516, complete genome	37634-37663	3	0.9
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448791	Streptococcus phage Javan517, complete genome	31485-31514	3	0.9
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448945	Streptococcus phage Javan454, complete genome	31588-31617	3	0.9
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448675	Streptococcus phage Javan129, complete genome	34316-34345	3	0.9
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448679	Streptococcus phage Javan137, complete genome	29642-29671	3	0.9
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448850	Streptococcus phage Javan132, complete genome	33416-33445	3	0.9
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448845	Streptococcus phage Javan118, complete genome	27670-27699	3	0.9
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448676	Streptococcus phage Javan131, complete genome	36334-36363	3	0.9
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448770	Streptococcus phage Javan477, complete genome	32286-32320	4	0.886
LS483329_2	2.2\|413858\|35\|LS483329\|PILER-CR	413858-413892	35	MK448793	Streptococcus phage Javan523, complete genome	33722-33756	4	0.886
LS483329_4	4.2\|821368\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821368-821397	30	MK448685	Streptococcus phage Javan155, complete genome	33427-33456	4	0.867
LS483329_4	4.2\|821368\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821368-821397	30	MK448849	Streptococcus phage Javan128, complete genome	36754-36783	4	0.867
LS483329_4	4.2\|821368\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821368-821397	30	MK448853	Streptococcus phage Javan144, complete genome	33427-33456	4	0.867
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448957	Streptococcus phage Javan484, complete genome	1156-1190	5	0.857
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448889	Streptococcus phage Javan262, complete genome	1175-1209	6	0.829
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448845	Streptococcus phage Javan118, complete genome	1216-1250	6	0.829
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448860	Streptococcus phage Javan172, complete genome	1323-1357	6	0.829
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448681	Streptococcus phage Javan141, complete genome	1289-1323	6	0.829
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448784	Streptococcus phage Javan505, complete genome	32632-32661	6	0.8
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448947	Streptococcus phage Javan458, complete genome	32632-32661	6	0.8
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448848	Streptococcus phage Javan126, complete genome	28077-28106	6	0.8
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448965	Streptococcus phage Javan506, complete genome	33001-33030	6	0.8
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448857	Streptococcus phage Javan164, complete genome	28077-28106	6	0.8
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448677	Streptococcus phage Javan133, complete genome	29068-29097	6	0.8
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448859	Streptococcus phage Javan170, complete genome	33827-33856	6	0.8
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448689	Streptococcus phage Javan163, complete genome	32632-32661	6	0.8
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448680	Streptococcus phage Javan139, complete genome	28731-28760	6	0.8
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448974	Streptococcus phage Javan524, complete genome	32632-32661	6	0.8
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448688	Streptococcus phage Javan161, complete genome	33785-33814	6	0.8
LS483329_4	4.5\|821566\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821566-821595	30	MK448789	Streptococcus phage Javan513, complete genome	32631-32660	6	0.8
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448852	Streptococcus phage Javan140, complete genome	1147-1181	7	0.8
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448784	Streptococcus phage Javan505, complete genome	1147-1181	7	0.8
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448947	Streptococcus phage Javan458, complete genome	1147-1181	7	0.8
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448690	Streptococcus phage Javan169, complete genome	1147-1181	7	0.8
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448689	Streptococcus phage Javan163, complete genome	1147-1181	7	0.8
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448974	Streptococcus phage Javan524, complete genome	1147-1181	7	0.8
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448789	Streptococcus phage Javan513, complete genome	1147-1181	7	0.8
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448678	Streptococcus phage Javan135, complete genome	1147-1181	7	0.8
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448683	Streptococcus phage Javan149, complete genome	1147-1181	7	0.8
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448792	Streptococcus phage Javan521, complete genome	1323-1357	7	0.8
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	NC_009018	Streptococcus phage phi3396, complete genome	1428-1462	7	0.8
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448679	Streptococcus phage Javan137, complete genome	1323-1357	7	0.8
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	NC_004584	Streptococcus prophage 315.1, complete genome	1428-1462	7	0.8
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448770	Streptococcus phage Javan477, complete genome	1323-1357	7	0.8
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448978	Streptococcus phage Javan532, complete genome	1323-1357	7	0.8
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448785	Streptococcus phage Javan507, complete genome	1323-1357	7	0.8
LS483329_4	4.7\|821698\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821698-821727	30	NZ_CP029209	Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence	406423-406452	8	0.733
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448848	Streptococcus phage Javan126, complete genome	1323-1357	9	0.743
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448857	Streptococcus phage Javan164, complete genome	1323-1357	9	0.743
LS483329_2	2.1\|413792\|35\|LS483329\|PILER-CR	413792-413826	35	MK448677	Streptococcus phage Javan133, complete genome	1323-1357	9	0.743
LS483329_4	4.2\|821368\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821368-821397	30	NZ_CP033221	Parasedimentitalea marina strain W43 plasmid pW43B, complete sequence	194722-194751	9	0.7
LS483329_4	4.2\|821368\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821368-821397	30	NC_008242	Chelativorans sp. BNC1 plasmid 1, complete sequence	268166-268195	9	0.7
LS483329_4	4.3\|821434\|30\|LS483329\|CRISPRCasFinder,CRT,PILER-CR	821434-821463	30	NZ_AP017564	Pseudanabaena sp. ABRG5-3 plasmid ABRG53d, complete sequence	107223-107252	9	0.7

1. spacer 4.1|821302|30|LS483329|CRISPRCasFinder,CRT matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 0, identity: 1.0

ctttagggcttacggtagttgggatgagtc	CRISPR spacer
ctttagggcttacggtagttgggatgagtc	Protospacer
******************************

2. spacer 4.1|821302|30|LS483329|CRISPRCasFinder,CRT matches to MK448941 (Streptococcus phage Javan446, complete genome) position: , mismatch: 0, identity: 1.0

ctttagggcttacggtagttgggatgagtc	CRISPR spacer
ctttagggcttacggtagttgggatgagtc	Protospacer
******************************

3. spacer 4.1|821302|30|LS483329|CRISPRCasFinder,CRT matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 0, identity: 1.0

ctttagggcttacggtagttgggatgagtc	CRISPR spacer
ctttagggcttacggtagttgggatgagtc	Protospacer
******************************

4. spacer 4.2|821368|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 0, identity: 1.0

aaatactgatgcggttgccatccttatcag	CRISPR spacer
aaatactgatgcggttgccatccttatcag	Protospacer
******************************

5. spacer 4.2|821368|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 0, identity: 1.0

aaatactgatgcggttgccatccttatcag	CRISPR spacer
aaatactgatgcggttgccatccttatcag	Protospacer
******************************

6. spacer 4.2|821368|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 0, identity: 1.0

aaatactgatgcggttgccatccttatcag	CRISPR spacer
aaatactgatgcggttgccatccttatcag	Protospacer
******************************

7. spacer 4.3|821434|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448767 (Streptococcus phage Javan467, complete genome) position: , mismatch: 0, identity: 1.0

gatgtctttgtctgtgaaataggcctctaa	CRISPR spacer
gatgtctttgtctgtgaaataggcctctaa	Protospacer
******************************

8. spacer 4.3|821434|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 0, identity: 1.0

gatgtctttgtctgtgaaataggcctctaa	CRISPR spacer
gatgtctttgtctgtgaaataggcctctaa	Protospacer
******************************

9. spacer 4.3|821434|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to NC_004586 (Streptococcus pyogenes phage 315.3, complete genome) position: , mismatch: 0, identity: 1.0

gatgtctttgtctgtgaaataggcctctaa	CRISPR spacer
gatgtctttgtctgtgaaataggcctctaa	Protospacer
******************************

10. spacer 4.3|821434|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448969 (Streptococcus phage Javan514, complete genome) position: , mismatch: 0, identity: 1.0

gatgtctttgtctgtgaaataggcctctaa	CRISPR spacer
gatgtctttgtctgtgaaataggcctctaa	Protospacer
******************************

11. spacer 4.3|821434|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448964 (Streptococcus phage Javan502, complete genome) position: , mismatch: 0, identity: 1.0

gatgtctttgtctgtgaaataggcctctaa	CRISPR spacer
gatgtctttgtctgtgaaataggcctctaa	Protospacer
******************************

12. spacer 4.3|821434|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448943 (Streptococcus phage Javan450, complete genome) position: , mismatch: 0, identity: 1.0

gatgtctttgtctgtgaaataggcctctaa	CRISPR spacer
gatgtctttgtctgtgaaataggcctctaa	Protospacer
******************************

13. spacer 4.3|821434|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 0, identity: 1.0

gatgtctttgtctgtgaaataggcctctaa	CRISPR spacer
gatgtctttgtctgtgaaataggcctctaa	Protospacer
******************************

14. spacer 4.3|821434|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 0, identity: 1.0

gatgtctttgtctgtgaaataggcctctaa	CRISPR spacer
gatgtctttgtctgtgaaataggcctctaa	Protospacer
******************************

15. spacer 4.3|821434|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448786 (Streptococcus phage Javan509, complete genome) position: , mismatch: 0, identity: 1.0

gatgtctttgtctgtgaaataggcctctaa	CRISPR spacer
gatgtctttgtctgtgaaataggcctctaa	Protospacer
******************************

16. spacer 4.3|821434|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448774 (Streptococcus phage Javan487, complete genome) position: , mismatch: 0, identity: 1.0

gatgtctttgtctgtgaaataggcctctaa	CRISPR spacer
gatgtctttgtctgtgaaataggcctctaa	Protospacer
******************************

17. spacer 4.3|821434|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448963 (Streptococcus phage Javan498, complete genome) position: , mismatch: 0, identity: 1.0

gatgtctttgtctgtgaaataggcctctaa	CRISPR spacer
gatgtctttgtctgtgaaataggcctctaa	Protospacer
******************************

18. spacer 4.3|821434|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448773 (Streptococcus phage Javan485, complete genome) position: , mismatch: 0, identity: 1.0

gatgtctttgtctgtgaaataggcctctaa	CRISPR spacer
gatgtctttgtctgtgaaataggcctctaa	Protospacer
******************************

19. spacer 4.3|821434|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 0, identity: 1.0

gatgtctttgtctgtgaaataggcctctaa	CRISPR spacer
gatgtctttgtctgtgaaataggcctctaa	Protospacer
******************************

20. spacer 4.4|821500|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 0, identity: 1.0

tcacgtatggtatttcaatcttgtttggac	CRISPR spacer
tcacgtatggtatttcaatcttgtttggac	Protospacer
******************************

21. spacer 4.4|821500|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 0, identity: 1.0

tcacgtatggtatttcaatcttgtttggac	CRISPR spacer
tcacgtatggtatttcaatcttgtttggac	Protospacer
******************************

22. spacer 4.4|821500|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 0, identity: 1.0

tcacgtatggtatttcaatcttgtttggac	CRISPR spacer
tcacgtatggtatttcaatcttgtttggac	Protospacer
******************************

23. spacer 4.4|821500|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 0, identity: 1.0

tcacgtatggtatttcaatcttgtttggac	CRISPR spacer
tcacgtatggtatttcaatcttgtttggac	Protospacer
******************************

24. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448952 (Streptococcus phage Javan472, complete genome) position: , mismatch: 0, identity: 1.0

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgatagttgcacctttggcatctgcaat	Protospacer
******************************

25. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448959 (Streptococcus phage Javan488, complete genome) position: , mismatch: 0, identity: 1.0

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgatagttgcacctttggcatctgcaat	Protospacer
******************************

26. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to NC_004587 (Streptococcus prophage 315.4, complete genome) position: , mismatch: 0, identity: 1.0

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgatagttgcacctttggcatctgcaat	Protospacer
******************************

27. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to NC_003157 (Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome) position: , mismatch: 0, identity: 1.0

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgatagttgcacctttggcatctgcaat	Protospacer
******************************

28. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 0, identity: 1.0

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgatagttgcacctttggcatctgcaat	Protospacer
******************************

29. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 0, identity: 1.0

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgatagttgcacctttggcatctgcaat	Protospacer
******************************

30. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448977 (Streptococcus phage Javan530, complete genome) position: , mismatch: 0, identity: 1.0

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgatagttgcacctttggcatctgcaat	Protospacer
******************************

31. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448949 (Streptococcus phage Javan460, complete genome) position: , mismatch: 0, identity: 1.0

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgatagttgcacctttggcatctgcaat	Protospacer
******************************

32. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 0, identity: 1.0

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgatagttgcacctttggcatctgcaat	Protospacer
******************************

33. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 0, identity: 1.0

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgatagttgcacctttggcatctgcaat	Protospacer
******************************

34. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448788 (Streptococcus phage Javan511, complete genome) position: , mismatch: 0, identity: 1.0

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgatagttgcacctttggcatctgcaat	Protospacer
******************************

35. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448957 (Streptococcus phage Javan484, complete genome) position: , mismatch: 0, identity: 1.0

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgatagttgcacctttggcatctgcaat	Protospacer
******************************

36. spacer 4.6|821632|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448970 (Streptococcus phage Javan516, complete genome) position: , mismatch: 0, identity: 1.0

tacagatattaatagcacactcgaagcgat	CRISPR spacer
tacagatattaatagcacactcgaagcgat	Protospacer
******************************

37. spacer 4.6|821632|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 0, identity: 1.0

tacagatattaatagcacactcgaagcgat	CRISPR spacer
tacagatattaatagcacactcgaagcgat	Protospacer
******************************

38. spacer 4.6|821632|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448945 (Streptococcus phage Javan454, complete genome) position: , mismatch: 0, identity: 1.0

tacagatattaatagcacactcgaagcgat	CRISPR spacer
tacagatattaatagcacactcgaagcgat	Protospacer
******************************

39. spacer 4.6|821632|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448941 (Streptococcus phage Javan446, complete genome) position: , mismatch: 0, identity: 1.0

tacagatattaatagcacactcgaagcgat	CRISPR spacer
tacagatattaatagcacactcgaagcgat	Protospacer
******************************

40. spacer 4.6|821632|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448957 (Streptococcus phage Javan484, complete genome) position: , mismatch: 0, identity: 1.0

tacagatattaatagcacactcgaagcgat	CRISPR spacer
tacagatattaatagcacactcgaagcgat	Protospacer
******************************

41. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448767 (Streptococcus phage Javan467, complete genome) position: , mismatch: 1, identity: 0.971

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcgaatctagt	Protospacer
.**********************************

42. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 1, identity: 0.971

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcgaatctagt	Protospacer
.**********************************

43. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448942 (Streptococcus phage Javan448, complete genome) position: , mismatch: 1, identity: 0.971

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcgaatctagt	Protospacer
.**********************************

44. spacer 2.1|413792|35|LS483329|PILER-CR matches to NC_004586 (Streptococcus pyogenes phage 315.3, complete genome) position: , mismatch: 1, identity: 0.971

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcgaatctagt	Protospacer
.**********************************

45. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448964 (Streptococcus phage Javan502, complete genome) position: , mismatch: 1, identity: 0.971

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcgaatctagt	Protospacer
.**********************************

46. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448943 (Streptococcus phage Javan450, complete genome) position: , mismatch: 1, identity: 0.971

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcgaatctagt	Protospacer
.**********************************

47. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 1, identity: 0.971

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcgaatctagt	Protospacer
.**********************************

48. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 1, identity: 0.971

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcgaatctagt	Protospacer
.**********************************

49. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448786 (Streptococcus phage Javan509, complete genome) position: , mismatch: 1, identity: 0.971

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcgaatctagt	Protospacer
.**********************************

50. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 1, identity: 0.971

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcgaatctagt	Protospacer
.**********************************

51. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448774 (Streptococcus phage Javan487, complete genome) position: , mismatch: 1, identity: 0.971

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcgaatctagt	Protospacer
.**********************************

52. spacer 4.1|821302|30|LS483329|CRISPRCasFinder,CRT matches to NC_009819 (Streptococcus phage P9, complete genome) position: , mismatch: 1, identity: 0.967

ctttagggcttacggtagttgggatgagtc	CRISPR spacer
ctttagggcttacgatagttgggatgagtc	Protospacer
**************.***************

53. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to NC_004585 (Streptococcus prophage 315.2, complete genome) position: , mismatch: 1, identity: 0.967

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgcgatagttgcacctttggcatctgcaat	Protospacer
**.***************************

54. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448966 (Streptococcus phage Javan508, complete genome) position: , mismatch: 1, identity: 0.967

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgcgatagttgcacctttggcatctgcaat	Protospacer
**.***************************

55. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448952 (Streptococcus phage Javan472, complete genome) position: , mismatch: 2, identity: 0.943

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcgaatctagc	Protospacer
.*********************************.

56. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448675 (Streptococcus phage Javan129, complete genome) position: , mismatch: 2, identity: 0.943

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcaaatctagt	Protospacer
.*************************.********

57. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448850 (Streptococcus phage Javan132, complete genome) position: , mismatch: 2, identity: 0.943

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcaaatctagt	Protospacer
.*************************.********

58. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448779 (Streptococcus phage Javan497, complete genome) position: , mismatch: 2, identity: 0.943

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttagcactggttatattaagtgccgaggaaaaa	Protospacer
..*********************************

59. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 2, identity: 0.943

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttagcactggttatattaagtgccgaggaaaaa	Protospacer
..*********************************

60. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 2, identity: 0.943

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttagcactggttatattaagtgccgaggaaaaa	Protospacer
..*********************************

61. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448968 (Streptococcus phage Javan512, complete genome) position: , mismatch: 2, identity: 0.943

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttagcactggttatattaagtgccgaggaaaaa	Protospacer
..*********************************

62. spacer 2.2|413858|35|LS483329|PILER-CR matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 2, identity: 0.943

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttagcactggttatattaagtgccgaggaaaaa	Protospacer
..*********************************

63. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448797 (Streptococcus phage Javan531, complete genome) position: , mismatch: 2, identity: 0.943

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttagcactggttatattaagtgccgaggaaaaa	Protospacer
..*********************************

64. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 2, identity: 0.943

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttagcactggttatattaagtgccgaggaaaaa	Protospacer
..*********************************

65. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 2, identity: 0.943

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttagcactggttatattaagtgccgaggaaaaa	Protospacer
..*********************************

66. spacer 2.2|413858|35|LS483329|PILER-CR matches to NC_004589 (Streptococcus prophage 315.6, complete genome) position: , mismatch: 2, identity: 0.943

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttagcactggttatattaagtgccgaggaaaaa	Protospacer
..*********************************

67. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 2, identity: 0.943

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cattagcactggttatattaagtgctgaggaaaaa	Protospacer
.************************.*********

68. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 2, identity: 0.943

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cattagcactggttatattaagtgctgaggaaaaa	Protospacer
.************************.*********

69. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448946 (Streptococcus phage Javan456, complete genome) position: , mismatch: 3, identity: 0.914

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttggcactggttatattaagtgccgaggaaaaa	Protospacer
..**.******************************

70. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448767 (Streptococcus phage Javan467, complete genome) position: , mismatch: 3, identity: 0.914

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttggcactggttatattaagtgccgaggaaaaa	Protospacer
..**.******************************

71. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 3, identity: 0.914

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttggcactggttatattaagtgccgaggaaaaa	Protospacer
..**.******************************

72. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448942 (Streptococcus phage Javan448, complete genome) position: , mismatch: 3, identity: 0.914

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttggcactggttatattaagtgccgaggaaaaa	Protospacer
..**.******************************

73. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 3, identity: 0.914

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttagcactggttatattaagtgccgatgaaaaa	Protospacer
..************************** ******

74. spacer 2.2|413858|35|LS483329|PILER-CR matches to NC_004586 (Streptococcus pyogenes phage 315.3, complete genome) position: , mismatch: 3, identity: 0.914

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttggcactggttatattaagtgccgaggaaaaa	Protospacer
..**.******************************

75. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448794 (Streptococcus phage Javan525, complete genome) position: , mismatch: 3, identity: 0.914

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttggcactggttatattaagtgccgaggaaaaa	Protospacer
..**.******************************

76. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448964 (Streptococcus phage Javan502, complete genome) position: , mismatch: 3, identity: 0.914

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttggcactggttatattaagtgccgaggaaaaa	Protospacer
..**.******************************

77. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448943 (Streptococcus phage Javan450, complete genome) position: , mismatch: 3, identity: 0.914

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttggcactggttatattaagtgccgaggaaaaa	Protospacer
..**.******************************

78. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 3, identity: 0.914

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttagcactggttatattaagtgccgatgaaaaa	Protospacer
..************************** ******

79. spacer 2.2|413858|35|LS483329|PILER-CR matches to M19348 (Streptococcus pyogenes phage H4489A hyaluronidase (hylP) and hypothetical protein genes, complete cds) position: , mismatch: 3, identity: 0.914

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttggcactggttatattaagtgccgaggaaaaa	Protospacer
..**.******************************

80. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448786 (Streptococcus phage Javan509, complete genome) position: , mismatch: 3, identity: 0.914

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttggcactggttatattaagtgccgaggaaaaa	Protospacer
..**.******************************

81. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448774 (Streptococcus phage Javan487, complete genome) position: , mismatch: 3, identity: 0.914

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttagcactggttatattaagtgccgatgaaaaa	Protospacer
..************************** ******

82. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448772 (Streptococcus phage Javan483, complete genome) position: , mismatch: 3, identity: 0.914

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttggcactggttatattaagtgccgaggaaaaa	Protospacer
..**.******************************

83. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448963 (Streptococcus phage Javan498, complete genome) position: , mismatch: 3, identity: 0.914

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttggcactggttatattaagtgccgaggaaaaa	Protospacer
..**.******************************

84. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448765 (Streptococcus phage Javan459, complete genome) position: , mismatch: 3, identity: 0.914

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttggcactggttatattaagtgccgaggaaaaa	Protospacer
..**.******************************

85. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 3, identity: 0.914

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttggcactggttatattaagtgccgaggaaaaa	Protospacer
..**.******************************

86. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 3, identity: 0.914

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttggcactggttatattaagtgccgaggaaaaa	Protospacer
..**.******************************

87. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448976 (Streptococcus phage Javan528, complete genome) position: , mismatch: 3, identity: 0.914

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cattggcactagttatattaagtgccgaggaaaaa	Protospacer
.***.*****.************************

88. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448951 (Streptococcus phage Javan470, complete genome) position: , mismatch: 3, identity: 0.914

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cattggcactagttatattaagtgccgaggaaaaa	Protospacer
.***.*****.************************

89. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 3, identity: 0.9

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
gataatagttgcacctttggcatctgcaat	Protospacer
 .*.**************************

90. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448970 (Streptococcus phage Javan516, complete genome) position: , mismatch: 3, identity: 0.9

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
gataatagttgcacctttggcatctgcaat	Protospacer
 .*.**************************

91. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448791 (Streptococcus phage Javan517, complete genome) position: , mismatch: 3, identity: 0.9

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
gataatagttgcacctttggcatctgcaat	Protospacer
 .*.**************************

92. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448945 (Streptococcus phage Javan454, complete genome) position: , mismatch: 3, identity: 0.9

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
gataatagttgcacctttggcatctgcaat	Protospacer
 .*.**************************

93. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448675 (Streptococcus phage Javan129, complete genome) position: , mismatch: 3, identity: 0.9

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tatgatagttgcacctttggcatctgccac	Protospacer
*.************************* *.

94. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448679 (Streptococcus phage Javan137, complete genome) position: , mismatch: 3, identity: 0.9

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tatgatagttgcacctttggcatctgccac	Protospacer
*.************************* *.

95. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448850 (Streptococcus phage Javan132, complete genome) position: , mismatch: 3, identity: 0.9

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tatgatagttgcacctttggcatctgccac	Protospacer
*.************************* *.

96. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448845 (Streptococcus phage Javan118, complete genome) position: , mismatch: 3, identity: 0.9

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tatgatagttgcacctttagcatctgcaac	Protospacer
*.****************.**********.

97. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 3, identity: 0.9

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tatgatagttgcacctttggcatctgccac	Protospacer
*.************************* *.

98. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 4, identity: 0.886

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttggcactggttatattaagtgctgaggaaaaa	Protospacer
..**.********************.*********

99. spacer 2.2|413858|35|LS483329|PILER-CR matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 4, identity: 0.886

tattagcactggttatattaagtgccgaggaaaaa	CRISPR spacer
cgttagcacttgttatattaagtgcggaggaaaaa	Protospacer
..******** ************** *********

100. spacer 4.2|821368|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448685 (Streptococcus phage Javan155, complete genome) position: , mismatch: 4, identity: 0.867

aaatactgatgcggttgccatccttatcag	CRISPR spacer
agagactgatgcgattgccatctttatcag	Protospacer
*.* *********.********.*******

101. spacer 4.2|821368|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 4, identity: 0.867

aaatactgatgcggttgccatccttatcag	CRISPR spacer
agagactgatgcgattgccatctttatcag	Protospacer
*.* *********.********.*******

102. spacer 4.2|821368|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448853 (Streptococcus phage Javan144, complete genome) position: , mismatch: 4, identity: 0.867

aaatactgatgcggttgccatccttatcag	CRISPR spacer
agagactgatgcgattgccatctttatcag	Protospacer
*.* *********.********.*******

103. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448957 (Streptococcus phage Javan484, complete genome) position: , mismatch: 5, identity: 0.857

taaatttggcgaggagagcgtgaggcgaatctagt-	CRISPR spacer
caaatttggcgaggagagcgtgaggcaagac-agta	Protospacer
.*************************.*. * ***

104. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448889 (Streptococcus phage Javan262, complete genome) position: , mismatch: 6, identity: 0.829

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcgaattccag	Protospacer
.*****************************.. .

105. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448845 (Streptococcus phage Javan118, complete genome) position: , mismatch: 6, identity: 0.829

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcgaattccag	Protospacer
.*****************************.. .

106. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448860 (Streptococcus phage Javan172, complete genome) position: , mismatch: 6, identity: 0.829

taaatttggcgaggagagcgtgaggcga-atctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcaatatgcaa-	Protospacer
.*************************.* ** .*.

107. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448681 (Streptococcus phage Javan141, complete genome) position: , mismatch: 6, identity: 0.829

taaatttggcgaggagagcgtgaggcga-atctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcaatatgcaa-	Protospacer
.*************************.* ** .*.

108. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448784 (Streptococcus phage Javan505, complete genome) position: , mismatch: 6, identity: 0.8

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgattgttgcacctttagcatcaaccac	Protospacer
****** ***********.***** .* *.

109. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448947 (Streptococcus phage Javan458, complete genome) position: , mismatch: 6, identity: 0.8

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgattgttgcacctttagcatcaaccac	Protospacer
****** ***********.***** .* *.

110. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448848 (Streptococcus phage Javan126, complete genome) position: , mismatch: 6, identity: 0.8

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgattgttgcacctttagcatcgaccac	Protospacer
****** ***********.***** .* *.

111. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448965 (Streptococcus phage Javan506, complete genome) position: , mismatch: 6, identity: 0.8

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgattgttgcacctttagcatcaaccac	Protospacer
****** ***********.***** .* *.

112. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448857 (Streptococcus phage Javan164, complete genome) position: , mismatch: 6, identity: 0.8

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgattgttgcacctttagcatcgaccac	Protospacer
****** ***********.***** .* *.

113. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448677 (Streptococcus phage Javan133, complete genome) position: , mismatch: 6, identity: 0.8

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgattgttgcacctttagcatcgaccac	Protospacer
****** ***********.***** .* *.

114. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 6, identity: 0.8

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgattgttgcacctttagcatcgaccac	Protospacer
****** ***********.***** .* *.

115. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448689 (Streptococcus phage Javan163, complete genome) position: , mismatch: 6, identity: 0.8

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgattgttgcacctttagcatcaaccac	Protospacer
****** ***********.***** .* *.

116. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448680 (Streptococcus phage Javan139, complete genome) position: , mismatch: 6, identity: 0.8

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgattgttgcacctttagcatcaaccac	Protospacer
****** ***********.***** .* *.

117. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448974 (Streptococcus phage Javan524, complete genome) position: , mismatch: 6, identity: 0.8

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgattgttgcacctttagcatcaaccac	Protospacer
****** ***********.***** .* *.

118. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 6, identity: 0.8

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgattgttgcacctttagcatcgaccac	Protospacer
****** ***********.***** .* *.

119. spacer 4.5|821566|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to MK448789 (Streptococcus phage Javan513, complete genome) position: , mismatch: 6, identity: 0.8

tgtgatagttgcacctttggcatctgcaat	CRISPR spacer
tgtgattgttgcacctttagcatcaaccac	Protospacer
****** ***********.***** .* *.

120. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448852 (Streptococcus phage Javan140, complete genome) position: , mismatch: 7, identity: 0.8

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcaaaaccgta	Protospacer
.*************************.** *..

121. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448784 (Streptococcus phage Javan505, complete genome) position: , mismatch: 7, identity: 0.8

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcaaaaccgta	Protospacer
.*************************.** *..

122. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448947 (Streptococcus phage Javan458, complete genome) position: , mismatch: 7, identity: 0.8

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcaaaaccgta	Protospacer
.*************************.** *..

123. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 7, identity: 0.8

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcaaaaccgta	Protospacer
.*************************.** *..

124. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448689 (Streptococcus phage Javan163, complete genome) position: , mismatch: 7, identity: 0.8

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcaaaaccgta	Protospacer
.*************************.** *..

125. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448974 (Streptococcus phage Javan524, complete genome) position: , mismatch: 7, identity: 0.8

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcaaaaccgta	Protospacer
.*************************.** *..

126. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448789 (Streptococcus phage Javan513, complete genome) position: , mismatch: 7, identity: 0.8

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcaaaaccgta	Protospacer
.*************************.** *..

127. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448678 (Streptococcus phage Javan135, complete genome) position: , mismatch: 7, identity: 0.8

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcaaaaccgta	Protospacer
.*************************.** *..

128. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448683 (Streptococcus phage Javan149, complete genome) position: , mismatch: 7, identity: 0.8

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caaatttggcgaggagagcgtgaggcaaaaccgta	Protospacer
.*************************.** *..

129. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 7, identity: 0.8

taaatttggcgaggagagcgtgaggcga-atctagt	CRISPR spacer
caattttggcgaggagagcgtgaggcaatatgcaa-	Protospacer
.** **********************.* ** .*.

130. spacer 2.1|413792|35|LS483329|PILER-CR matches to NC_009018 (Streptococcus phage phi3396, complete genome) position: , mismatch: 7, identity: 0.8

taaatttggcgaggagagcgtgaggcga-atctagt	CRISPR spacer
caattttggcgaggagagcgtgaggcaatatgcaa-	Protospacer
.** **********************.* ** .*.

131. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448679 (Streptococcus phage Javan137, complete genome) position: , mismatch: 7, identity: 0.8

taaatttggcgaggagagcgtgaggcga-atctagt	CRISPR spacer
caattttggcgaggagagcgtgaggcaatatgcaa-	Protospacer
.** **********************.* ** .*.

132. spacer 2.1|413792|35|LS483329|PILER-CR matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 7, identity: 0.8

taaatttggcgaggagagcgtgaggcga-atctagt	CRISPR spacer
caattttggcgaggagagcgtgaggcaatatgcaa-	Protospacer
.** **********************.* ** .*.

133. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 7, identity: 0.8

taaatttggcgaggagagcgtgaggcga-atctagt	CRISPR spacer
caattttggcgaggagagcgtgaggcaatatgcaa-	Protospacer
.** **********************.* ** .*.

134. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 7, identity: 0.8

taaatttggcgaggagagcgtgaggcga-atctagt	CRISPR spacer
caattttggcgaggagagcgtgaggcaatatgcaa-	Protospacer
.** **********************.* ** .*.

135. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 7, identity: 0.8

taaatttggcgaggagagcgtgaggcga-atctagt	CRISPR spacer
caattttggcgaggagagcgtgaggcaatatgcaa-	Protospacer
.** **********************.* ** .*.

136. spacer 4.7|821698|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029209 (Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence) position: , mismatch: 8, identity: 0.733

gctagcttgctctcaccgttgctattgtca	CRISPR spacer
cggcgcttgttcccaccgttgctattgccg	Protospacer
    *****.**.**************.*.

137. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448848 (Streptococcus phage Javan126, complete genome) position: , mismatch: 9, identity: 0.743

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caattttggcgaggagagcgtaaggcgatatgaaa	Protospacer
.** *****************.******  . *.

138. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448857 (Streptococcus phage Javan164, complete genome) position: , mismatch: 9, identity: 0.743

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caattttggcgaggagagcgtaaggcgatatgaaa	Protospacer
.** *****************.******  . *.

139. spacer 2.1|413792|35|LS483329|PILER-CR matches to MK448677 (Streptococcus phage Javan133, complete genome) position: , mismatch: 9, identity: 0.743

taaatttggcgaggagagcgtgaggcgaatctagt	CRISPR spacer
caattttggcgaggagagcgtaaggcgatatgaaa	Protospacer
.** *****************.******  . *.

140. spacer 4.2|821368|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033221 (Parasedimentitalea marina strain W43 plasmid pW43B, complete sequence) position: , mismatch: 9, identity: 0.7

aaatactgatgcggttgccatccttatcag	CRISPR spacer
cgtcgtcgatgcgcttgccatccttatcaa	Protospacer
 . ....****** ***************.

141. spacer 4.2|821368|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to NC_008242 (Chelativorans sp. BNC1 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.7

aaatactgatgcggttgccatccttatcag	CRISPR spacer
ccttgtcgatgcggtggccatccttatcga	Protospacer
   *...******** ************..

142. spacer 4.3|821434|30|LS483329|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017564 (Pseudanabaena sp. ABRG5-3 plasmid ABRG53d, complete sequence) position: , mismatch: 9, identity: 0.7

gatgtctttgtctgtgaaataggcctctaa	CRISPR spacer
agaaattttgtctgtgaaattggcttctag	Protospacer
.. . .************** ***.****.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

35764 : 48937

Synechococcus_phage(44.44%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF06551.1\|35764_36037_+	phosphoribosylaminoimidazole-succinocarboxamide synthase	M4R1E8	Synechococcus_phage	1.6e-06	43.9
SQF06552.1\|35984_36500_+	phosphoribosylaminoimidazole-succinocarboxamide synthase	A0A0E3HI61	Synechococcus_phage	6.6e-30	42.0
SQF06553.1\|36575_40349_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	6.1e-40	27.4
SQF06554.1\|40509_41964_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	8.3e-54	32.7
SQF06555.1\|41991_43014_+	phosphoribosylaminoimidazole synthetase	R9TMC7	Synechococcus_phage	3.1e-63	41.8
SQF06556.1\|43181_43736_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.8e-25	36.1
SQF06557.1\|43919_45467_+	IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase	E3SNU8	Prochlorococcus_phage	2.8e-44	51.8
SQF06558.1\|45524_46649_-	bacterial SH3 domain protein	F8HGP2	Streptococcus_phage	7.7e-07	28.6
SQF06559.1\|46811_48167_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
SQF06560.1\|48325_48937_+	phosphoribosyl carboxyaminoimidazole mutase	A0A2P0VNU7	Tetraselmis_virus	3.1e-18	42.3

DBSCAN-SWA_2

93360 : 104759

Streptococcus_phage(55.56%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF06611.1\|93360_93978_+	phage antirepressor protein	A0A2H4JB17	uncultured_Caudovirales_phage	2.6e-41	44.0
SQF06612.1\|93977_94247_+	Prophage antirepressor	NA	NA	NA	NA
SQF06613.1\|94503_94677_+	phage protein	NA	NA	NA	NA
SQF06614.1\|94818_95271_+	phage protein	NA	NA	NA	NA
SQF06615.1\|95372_95714_+	phage protein	NA	NA	NA	NA
SQF06616.1\|95700_95922_+	Uncharacterised protein	NA	NA	NA	NA
SQF06617.1\|95924_96116_+	phage protein	NA	NA	NA	NA
SQF06618.1\|96127_96457_+	phage protein	NA	NA	NA	NA
SQF06619.1\|96459_96732_+	Uncharacterised protein	A0A1X9I5U9	Streptococcus_phage	6.1e-19	60.0
SQF06620.1\|96732_97599_+	replication protein	A0A1X9I6L2	Streptococcus_phage	4.0e-120	73.1
SQF06621.1\|98090_99005_+	Predicted P-loop ATPase and inactivated derivatives	A0A0A7RTG3	Clostridium_phage	4.9e-28	30.0
SQF06622.1\|99297_99552_+	phage protein	NA	NA	NA	NA
SQF06623.1\|99548_99722_+	phage protein	A0A1X9I5U0	Streptococcus_phage	5.6e-10	57.9
SQF06624.1\|99902_100412_+	phage protein	A0A1X9I5U4	Streptococcus_phage	1.1e-29	63.5
SQF06625.1\|100485_100974_+	phage protein	A0A1X9I5V2	Streptococcus_phage	4.0e-45	54.3
SQF06626.1\|101376_101739_+	phage protein	A0A2H4JFS1	uncultured_Caudovirales_phage	3.9e-05	29.9
SQF06627.1\|101713_101881_+	phage protein	NA	NA	NA	NA
SQF06628.1\|102286_102856_+	Uncharacterised protein	NA	NA	NA	NA
SQF06629.1\|103499_104759_-\|tRNA	tyrosyl-tRNA synthetase	A0A1S6UA79	Serratia_phage	1.0e-71	40.5

DBSCAN-SWA_3

351433 : 357468

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF06856.1\|351433_352069_+	thymidylate kinase	M1PSC7	Streptococcus_phage	2.0e-65	63.4
SQF06857.1\|352086_352962_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	1.8e-72	47.9
SQF06858.1\|353624_353948_+	DNA replication initiation control protein	M1PFV3	Streptococcus_phage	1.3e-28	59.4
SQF06859.1\|353952_354816_+	corrin/porphyrin methyltransferase	M1PLC5	Streptococcus_phage	1.5e-114	74.7
SQF06860.1\|354842_355235_+	hypothetical membrane associated protein	NA	NA	NA	NA
SQF06861.1\|355281_355911_-	copper homeostasis protein	NA	NA	NA	NA
SQF06862.1\|356210_356567_+	arsenate reductase	M1PLC0	Streptococcus_phage	2.8e-40	66.7
SQF06863.1\|356640_357468_-	3'-exo-deoxyribonuclease	M1PSC0	Streptococcus_phage	4.2e-127	79.5

DBSCAN-SWA_4

452458 : 558594

118

Streptococcus_phage(45.07%)

capsid,head,protease,terminase,transposase,tail,integrase,tRNA

attL 474832:474851|attR 516247:516266

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF06953.1\|452458_455260_+\|tRNA	isoleucyl-tRNA synthetase	H2EEZ0	Moumouvirus	3.2e-70	26.9
SQF06954.1\|455523_455826_-	hypothetical cytosolic protein	NA	NA	NA	NA
SQF06955.1\|455876_456332_-	mutT/nudix family protein	NA	NA	NA	NA
SQF06956.1\|456459_458742_-	ATP-dependent endopeptidase clp ATP-binding subunit	A0A2C9CYX3	Yersinia_phage	1.1e-124	39.6
SQF06957.1\|459040_459271_+	Protein of uncharacterised function (DUF1797)	NA	NA	NA	NA
SQF06958.1\|459396_460083_+	arginine transport system permease	NA	NA	NA	NA
SQF06959.1\|460082_460817_+	arginine transport ATP-binding protein	G9BWD6	Planktothrix_phage	2.8e-34	38.8
SQF06960.1\|460965_462375_+	deoxyribodipyrimidine photolyase	A0A1V0SGL1	Hokovirus	4.4e-60	32.8
SQF06961.1\|462552_464247_+	phosphoglucomutase	A0A1X9I671	Streptococcus_phage	1.6e-128	42.4
SQF06962.1\|464453_465308_+	tetrahydrofolate dehydrogenase	A0A249XZQ2	Enterococcus_phage	2.0e-39	39.8
SQF06963.1\|465460_466801_+	exodeoxyribonuclease VII large subunit	A0A1V0SIT1	Klosneuvirus	1.1e-39	30.9
SQF06964.1\|466778_466994_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
SQF06965.1\|466993_467866_+	dimethylallyltransferase	NA	NA	NA	NA
SQF06966.1\|467858_468686_+	hemolysin	NA	NA	NA	NA
SQF06967.1\|468672_469143_+	arginine repressor	NA	NA	NA	NA
SQF06968.1\|469164_470826_+	DNA repair protein recN	NA	NA	NA	NA
SQF06969.1\|471033_472008_+	LPXTG-motif cell wall anchor domain-containing protein	NA	NA	NA	NA
SQF06970.1\|472235_473075_+	degV family protein	A0A0N9SI50	Staphylococcus_phage	7.0e-13	35.7
SQF06971.1\|473049_473910_+	GDSL family lipase	NA	NA	NA	NA
SQF06972.1\|473887_474475_+	membrane protein	NA	NA	NA	NA
SQF06973.1\|474573_474849_+	DNA-binding protein HU 1	A7KV42	Bacillus_phage	2.6e-25	73.0
474832:474851	attL	NA	NA	NA	NA
SQF06974.1\|474938_476081_-\|integrase	phage integrase family protein	M1NRJ9	Streptococcus_phage	2.4e-173	77.4
SQF06975.1\|476209_476476_-	phage protein	NA	NA	NA	NA
SQF06976.1\|476487_476868_-	peptidase	A0A1S5SFH2	Streptococcus_phage	6.1e-41	61.9
SQF06977.1\|476871_477144_-	Cro/CI family phage transcriptional regulator	Q7Y4M0	Streptococcus_phage	4.8e-32	72.8
SQF06978.1\|477915_478065_-	Uncharacterised protein	NA	NA	NA	NA
SQF06979.1\|478371_478563_+	phage protein	A7J270	Streptococcus_phage	4.0e-25	92.1
SQF06980.1\|478574_479228_+	prophage LambdaSa1, antirepressor	A0A2H4IZX7	uncultured_Caudovirales_phage	4.4e-71	59.7
SQF06981.1\|479239_479398_+	Uncharacterised protein	NA	NA	NA	NA
SQF06982.1\|479326_479587_-	Uncharacterised protein	M1PS67	Streptococcus_phage	5.8e-27	70.9
SQF06983.1\|479728_479938_-	Uncharacterised protein	NA	NA	NA	NA
SQF06984.1\|480017_480266_+	Uncharacterised protein	A0A141E1M0	Streptococcus_phage	1.6e-26	69.5
SQF06985.1\|480239_480455_-	Uncharacterised protein	A0A1S5SA41	Streptococcus_phage	1.9e-15	61.4
SQF06986.1\|480561_480873_+	excisionase	A0A1S5SA25	Streptococcus_phage	1.4e-43	78.6
SQF06987.1\|480874_481045_+	phage protein	A7J273	Streptococcus_phage	2.9e-19	87.5
SQF06988.1\|481037_481223_+	phage protein	NA	NA	NA	NA
SQF06989.1\|481250_481637_+	phage protein	A7J274	Streptococcus_phage	1.4e-56	87.4
SQF06990.1\|481633_481783_+	phage protein	A7J275	Streptococcus_phage	8.5e-15	88.0
SQF06991.1\|482126_482330_+	phage protein	A7J276	Streptococcus_phage	1.6e-32	98.5
SQF06992.1\|482418_482718_+	phage protein	A7J277	Streptococcus_phage	1.8e-43	100.0
SQF06993.1\|482717_483875_+	phage protein	A7J278	Streptococcus_phage	3.0e-216	97.9
SQF06994.1\|483889_484447_+	phage protein	D2J040	Enterococcus_phage	8.6e-52	59.0
SQF06995.1\|484489_486412_+	phage DNA polymerase	A7J280	Streptococcus_phage	0.0e+00	98.4
SQF06996.1\|486416_488801_+	phage DNA primase/helicase protein	A7J282	Streptococcus_phage	8.2e-277	94.6
SQF06997.1\|489186_489462_+	phage protein	A7J283	Streptococcus_phage	3.5e-46	98.9
SQF06998.1\|489458_490781_+	SNF2 family phage protein	A7J284	Streptococcus_phage	3.0e-252	97.7
SQF06999.1\|490781_490952_+	phage protein	A7J285	Streptococcus_phage	9.0e-21	92.3
SQF07000.1\|490944_491217_+	phage membrane protein	A7J287	Streptococcus_phage	5.7e-25	73.3
SQF07001.1\|491219_491366_+	Uncharacterised protein	NA	NA	NA	NA
SQF07002.1\|491349_491766_+	phage protein	A7J289	Streptococcus_phage	3.3e-72	99.3
SQF07003.1\|491885_492581_+	phage protein	A0A2H4J4R0	uncultured_Caudovirales_phage	4.4e-29	34.5
SQF07004.1\|492582_493869_+\|terminase	phage terminase	A0A1S5SA45	Streptococcus_phage	5.9e-221	85.0
SQF07005.1\|493882_495385_+\|capsid	Minor capsid protein	Q938L2	Temperate_phage	5.9e-281	99.6
SQF07006.1\|495389_496868_+\|capsid	capsid protein	Q938L1	Temperate_phage	9.0e-274	99.6
SQF07007.1\|496839_497079_+	phage protein	Q938L0	Temperate_phage	2.8e-36	100.0
SQF07008.1\|497140_497407_+	putative phage associated protein	Q938K9	Temperate_phage	1.1e-36	95.5
SQF07009.1\|497538_498147_+	phage protein	Q938K8	Temperate_phage	4.0e-95	95.0
SQF07010.1\|498150_498969_+\|head	putative major head protein	Q79S85	Temperate_phage	9.8e-145	99.3
SQF07011.1\|499022_499439_+	phage protein	Q938K7	Temperate_phage	3.6e-55	98.2
SQF07012.1\|499401_499761_+\|capsid	minor capsid protein - phage associated	Q79S86	Temperate_phage	1.0e-58	100.0
SQF07013.1\|499760_500117_+	phage protein	Q79S88	Temperate_phage	4.5e-62	100.0
SQF07014.1\|500113_500512_+\|capsid	minor capsid protein	Q79S87	Temperate_phage	3.5e-71	100.0
SQF07015.1\|500511_500982_+\|tail	major tail shaft protein	Q938K6	Temperate_phage	8.0e-83	100.0
SQF07016.1\|501034_501469_+	phage protein	Q938K5	Temperate_phage	2.9e-71	99.3
SQF07017.1\|501472_502054_+	bacteriophage Gp15 family protein	Q938K4	Temperate_phage	1.6e-104	98.4
SQF07018.1\|502043_505304_+	phage protein	Q938K3	Temperate_phage	0.0e+00	98.3
SQF07019.1\|505300_506017_+	phage protein	Q938K2	Temperate_phage	3.6e-135	98.7
SQF07020.1\|506013_508161_+	Phage endopeptidase	Q938K1	Temperate_phage	0.0e+00	94.9
SQF07021.1\|508157_509381_+	phage protein	A3F657	Streptococcus_phage	6.7e-49	41.3
SQF07022.1\|509382_509697_+	phage protein	NA	NA	NA	NA
SQF07023.1\|509707_511531_+	phage protein	Q938J9	Temperate_phage	1.1e-212	79.9
SQF07024.1\|511539_511968_+	phage protein	A3F661	Streptococcus_phage	2.8e-66	92.2
SQF07025.1\|511970_512582_+	phage protein	Q938J7	Temperate_phage	3.7e-80	88.2
SQF07026.1\|512592_512922_+	Uncharacterised protein	A3F663	Streptococcus_phage	6.2e-50	99.0
SQF07027.1\|512923_513256_+	N-acetylmuramoyl-L-alanine amidase	A3F664	Streptococcus_phage	5.7e-51	100.0
SQF07028.1\|513257_514010_+	phage-associated cell wall hydrolase	A3F665	Streptococcus_phage	2.1e-141	97.2
SQF07029.1\|514078_514786_-	exotoxin type C	A0A097PAT7	Streptococcus_pyogenes_phage	3.9e-09	27.1
SQF07030.1\|514896_515655_-	DNA/RNA non-specific endonuclease family protein	NA	NA	NA	NA
SQF07031.1\|515894_516077_+	paratox	A3F673	Streptococcus_phage	2.0e-21	81.7
SQF07032.1\|516597_518460_+	putative heavy metal-transporting ATPase	E4ZFI9	Streptococcus_phage	7.0e-90	33.7
516247:516266	attR	NA	NA	NA	NA
SQF07033.1\|518759_519695_-	dihydroorotate dehydrogenase 1A	A0A1V0SH91	Hokovirus	7.9e-66	45.1
SQF07034.1\|519933_520629_+	phosphoglyceromutase	NA	NA	NA	NA
SQF07035.1\|520735_521257_+	3H domain-containing protein	NA	NA	NA	NA
SQF07036.1\|521417_521960_+	membrane protein	NA	NA	NA	NA
SQF07037.1\|522083_522863_+	formate transporter	NA	NA	NA	NA
SQF07038.1\|523659_524256_+	recombination protein	NA	NA	NA	NA
SQF07039.1\|524356_525403_+	D-alanine--D-alanine ligase	NA	NA	NA	NA
SQF07040.1\|525593_526985_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
SQF07041.1\|527064_527760_+	integral membrane family protein	NA	NA	NA	NA
SQF07042.1\|528007_529552_+	peptide chain release factor 3	A0A1B0RXH7	Streptococcus_phage	8.3e-36	29.1
SQF07043.1\|529858_531478_+	DEAD-box ATP-dependent RNA helicase CshA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.9e-59	36.5
SQF07044.1\|531604_533605_+	Kup system potassium uptake protein	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	1.1e-64	34.0
SQF07045.1\|533628_533907_-	GIY-YIG catalytic domain-containing protein	W8W2G4	Invertebrate_iridovirus	7.9e-06	36.0
SQF07046.1\|533896_534751_-	methyltransferase	NA	NA	NA	NA
SQF07047.1\|534790_535531_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
SQF07048.1\|535730_536393_+	comE operon 1 domain-containing protein	NA	NA	NA	NA
SQF07049.1\|536373_538617_+	DNA internalization-related competence protein ComEC/Rec2	M1PSD2	Streptococcus_phage	4.0e-55	59.2
SQF07050.1\|538687_539728_+	DNA polymerase III subunit delta	NA	NA	NA	NA
SQF07051.1\|539824_540430_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	3.9e-58	52.7
SQF07052.1\|540596_540830_+	beta-lactamase	NA	NA	NA	NA
SQF07053.1\|541054_541645_+	S11 family peptidase	NA	NA	NA	NA
SQF07054.1\|541758_542979_-	hypothetical cytosolic protein	NA	NA	NA	NA
SQF07055.1\|542983_544012_-\|tRNA	S-adenosylmethionine-tRNA ribosyltransferase-isomerase	NA	NA	NA	NA
SQF07056.1\|544213_544918_+	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
SQF07057.1\|545036_545753_+	16S pseudouridylate synthetase	NA	NA	NA	NA
SQF07058.1\|546048_547011_+	competence CoiA-like family protein	NA	NA	NA	NA
SQF07059.1\|547023_548829_+	oligoendopeptidase F	NA	NA	NA	NA
SQF07060.1\|549204_550401_+	major facilitator superfamily protein	NA	NA	NA	NA
SQF07061.1\|550502_551174_+	O-methyltransferase	A0A2P1JQT7	Mycobacterium_phage	1.9e-08	27.2
SQF07062.1\|551236_552292_+	foldase protein prsA 1	NA	NA	NA	NA
SQF07063.1\|552678_555297_+\|tRNA	Alanyl-tRNA synthetase	A0A1V0SK38	Klosneuvirus	5.1e-62	34.1
SQF07064.1\|555482_555617_+	Uncharacterised protein	NA	NA	NA	NA
SQF07065.1\|555657_555873_+	XRE family transcriptional regulator	NA	NA	NA	NA
SQF07066.1\|555869_556631_+	hypothetical membrane spanning protein	NA	NA	NA	NA
SQF07067.1\|556649_557345_+\|protease	CAAX amino terminal protease family protein	NA	NA	NA	NA
SQF07068.1\|557436_557658_-\|transposase	transposase	U5P429	Shigella_phage	4.2e-10	42.9
SQF07069.1\|557812_558268_-\|transposase	transposase	U5P429	Shigella_phage	9.0e-15	35.5
SQF07070.1\|558300_558594_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_5

875087 : 930262

Bacillus_virus(23.08%)

transposase,protease,tRNA,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF07367.1\|875087_875987_-\|tRNA	tRNA delta(2)-isopentenylpyrophosphate transferase	NA	NA	NA	NA
SQF07368.1\|876120_876297_+	putative uncharacterized protein ORF 3	NA	NA	NA	NA
SQF07369.1\|876414_877323_-	exfoliative toxin	NA	NA	NA	NA
SQF07370.1\|877559_877979_-	glutathione S-transferase	NA	NA	NA	NA
SQF07371.1\|878289_879276_-	Rhodanese domain protein UPF0176, Firmicutes subgroup	NA	NA	NA	NA
SQF07372.1\|879471_879774_+	Uncharacterised protein	NA	NA	NA	NA
SQF07373.1\|880320_881526_-	30S ribosomal protein S1	NA	NA	NA	NA
SQF07374.1\|881915_882146_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA
SQF07375.1\|882209_883232_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA
SQF07376.1\|883354_885778_-	topoisomerase IV subunit	G3M9Z5	Bacillus_virus	3.5e-97	33.3
SQF07377.1\|885904_887854_-	topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	3.3e-122	42.0
SQF07378.1\|887988_888630_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
SQF07379.1\|888687_889956_-	dihydroorotase	NA	NA	NA	NA
SQF07380.1\|890087_890741_-	uracil-DNA glycosylase	A0A0B5IW78	Pandoravirus	5.8e-39	39.7
SQF07381.1\|890873_891524_-	amino-acid ABC transporter permease yckA	NA	NA	NA	NA
SQF07382.1\|891552_892416_-	cystine-binding protein	NA	NA	NA	NA
SQF07383.1\|892533_893988_-	amidase	NA	NA	NA	NA
SQF07384.1\|894184_894814_-	orotate phosphoribosyltransferase	NA	NA	NA	NA
SQF07385.1\|894871_895564_-	orotidine 5'-phosphate decarboxylase	NA	NA	NA	NA
SQF07386.1\|895840_896377_-	Uncharacterised protein	NA	NA	NA	NA
SQF07387.1\|896649_897504_+	LysR family transcriptional regulator	NA	NA	NA	NA
SQF07388.1\|897583_898372_-	LytR family transcriptional regulator	NA	NA	NA	NA
SQF07389.1\|898364_899078_-	Purine nucleoside phosphorylase	NA	NA	NA	NA
SQF07390.1\|899740_900550_-	purine nucleoside phosphorylase	Q5YBA4	Grouper_iridovirus	8.7e-53	41.9
SQF07391.1\|900533_900974_-	arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	1.3e-34	54.5
SQF07392.1\|900992_902204_-	phosphopentomutase	NA	NA	NA	NA
SQF07393.1\|902280_902964_-	ribose-5-phosphate isomerase A	NA	NA	NA	NA
SQF07394.1\|903342_905442_+\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	2.5e-120	38.5
SQF07395.1\|905499_906243_-	virulence factor relevant regulator	NA	NA	NA	NA
SQF07396.1\|906390_906990_-	ribosome biogenesis GTP-binding protein YsxC	NA	NA	NA	NA
SQF07397.1\|906999_908229_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	7.8e-138	60.5
SQF07398.1\|908358_908529_-	hypothetical membrane associated protein	NA	NA	NA	NA
SQF07399.1\|908548_909046_-	dihydrofolate reductase	A0A2H5BFT3	Microbacterium_phage	2.5e-10	29.7
SQF07400.1\|909125_909965_-	thymidylate synthase	U5J9N5	Bacillus_phage	1.7e-83	53.2
SQF07401.1\|910173_911349_+	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
SQF07402.1\|911335_912607_+	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA
SQF07403.1\|912842_913832_-	isopentenyl pyrophosphate isomerase	NA	NA	NA	NA
SQF07404.1\|913818_914832_-	phosphomevalonate kinase	NA	NA	NA	NA
SQF07405.1\|914824_915769_-	diphosphomevalonate decarboxylase	NA	NA	NA	NA
SQF07406.1\|915750_916629_-	mevalonate kinase	NA	NA	NA	NA
SQF07407.1\|916922_918155_-	two component system histidine kinase	NA	NA	NA	NA
SQF07408.1\|918163_918832_-	two-component response regulator	W8CYM9	Bacillus_phage	2.3e-19	28.8
SQF07409.1\|918834_919485_-	GTP pyrophosphokinase	NA	NA	NA	NA
SQF07410.1\|919704_921717_+	5'-nucleotidase	NA	NA	NA	NA
SQF07411.1\|921798_922209_-	polypeptide deformylase family protein	E3SLL2	Synechococcus_phage	6.9e-06	30.6
SQF07412.1\|923098_924976_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	3.9e-64	31.7
SQF07413.1\|924972_926181_-\|head	poly A polymerase head domain-containing protein	H7BUW3	unidentified_phage	5.3e-38	45.0
SQF07414.1\|926305_927154_-	degV family protein	NA	NA	NA	NA
SQF07415.1\|927153_927534_-\|transposase	transposase	NA	NA	NA	NA
SQF07416.1\|927760_927937_-	nucleoside diphosphate kinase	NA	NA	NA	NA
SQF07417.1\|928435_929461_+\|protease	igG-degrading protease	NA	NA	NA	NA
SQF07418.1\|930142_930262_+\|transposase	degenerate transposase	NA	NA	NA	NA

DBSCAN-SWA_6

967611 : 978214

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF07454.1\|967611_968754_-	aminotransferase class-V family protein	A0A1X6WFP1	Pacmanvirus	4.1e-24	27.0
SQF07455.1\|968988_969429_+	membrane protein	NA	NA	NA	NA
SQF07456.1\|969458_970727_+	folylpolyglutamate synthase	NA	NA	NA	NA
SQF07457.1\|970814_972167_-	glutathione reductase	A0A2K5B2C5	Erysipelothrix_phage	4.5e-30	24.0
SQF07458.1\|972387_972729_-	hypothetical cytosolic protein	A0A1X9I5Y8	Streptococcus_phage	5.9e-19	41.1
SQF07459.1\|972789_973956_-	chorismate synthase	A0A291AU41	Pandoravirus	4.5e-34	32.8
SQF07460.1\|974049_974736_-	3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	2.4e-88	69.3
SQF07461.1\|974732_975896_-	SAM-dependent methyltransferase	W6LLI2	Streptococcus_phage	3.4e-143	65.1
SQF07462.1\|976003_978214_+	phosphoglycerol transferase	W6LM83	Streptococcus_phage	2.9e-268	69.1

DBSCAN-SWA_7

1164145 : 1195979

Tupanvirus(14.29%)

transposase,protease,tRNA,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF07632.1\|1164145_1166089_-\|tRNA	threonyl-tRNA synthetase	A0A2K9L297	Tupanvirus	1.0e-120	38.7
SQF07633.1\|1166510_1167845_-	glycosyl transferases group 1 family protein	NA	NA	NA	NA
SQF07634.1\|1167846_1168845_-	glycosyltransferase	NA	NA	NA	NA
SQF07635.1\|1168975_1169977_-	Catabolite control protein A	C6ZCU4	Enterobacteria_phage	6.1e-24	28.5
SQF07636.1\|1170150_1171236_+	Xaa-Pro dipeptidase	NA	NA	NA	NA
SQF07637.1\|1171284_1171950_+	NAD(P)H nitroreductase yfkO	NA	NA	NA	NA
SQF07638.1\|1171960_1172338_+	bleomycin resistance protein	NA	NA	NA	NA
SQF07639.1\|1172482_1173409_+	glucosyl transferase family 2	V5USA4	Oenococcus_phage	2.6e-77	47.5
SQF07640.1\|1173619_1174303_+	membrane protein	NA	NA	NA	NA
SQF07641.1\|1174302_1175229_+	membrane protein	NA	NA	NA	NA
SQF07642.1\|1175278_1175926_+	pyroglutamyl-peptidase I	NA	NA	NA	NA
SQF07643.1\|1176043_1176763_-	glutamine cyclotransferase	NA	NA	NA	NA
SQF07644.1\|1176768_1177236_-	ssrA-binding protein	W5RAM5	Staphylococcus_phage	1.7e-40	56.3
SQF07645.1\|1177238_1179569_-	ribonuclease R	Q0GXV6	Lactococcus_phage	1.8e-90	40.0
SQF07646.1\|1179665_1179902_-	preprotein translocase subunit	NA	NA	NA	NA
SQF07647.1\|1180090_1181035_-	multidrug resistance protein B	NA	NA	NA	NA
SQF07648.1\|1181471_1182974_-	ATPase	A0A248XCZ8	Klebsiella_phage	1.4e-77	43.5
SQF07649.1\|1183163_1183757_-	dephospho-CoA kinase	NA	NA	NA	NA
SQF07650.1\|1183753_1184581_-	formamidopyrimidine-DNA glycosylase	A0A127AWE5	Bacillus_phage	1.3e-16	27.8
SQF07651.1\|1184752_1185619_-	transcriptional regulator	NA	NA	NA	NA
SQF07652.1\|1186689_1186959_+	Uncharacterised protein	NA	NA	NA	NA
SQF07653.1\|1187306_1187705_-	histidine kinase	NA	NA	NA	NA
SQF07654.1\|1187797_1188865_-	Uncharacterised protein	NA	NA	NA	NA
SQF07655.1\|1189109_1189520_-	Uncharacterised protein	NA	NA	NA	NA
SQF07656.1\|1189713_1189995_-	Uncharacterised protein	NA	NA	NA	NA
SQF07657.1\|1190042_1190237_-\|bacteriocin	bacteriocin-associated protein	NA	NA	NA	NA
SQF07658.1\|1190530_1190731_-	hypothetical membrane associated protein	NA	NA	NA	NA
SQF07659.1\|1190743_1190971_-	BlpM	NA	NA	NA	NA
SQF07660.1\|1191287_1191710_+\|transposase	transposase	NA	NA	NA	NA
SQF07661.1\|1191706_1191856_+\|transposase	IS1191 transposase	NA	NA	NA	NA
SQF07662.1\|1192193_1192376_-\|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	NA	NA	NA	NA
SQF07663.1\|1192488_1192623_-\|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	NA	NA	NA	NA
SQF07664.1\|1193020_1193275_+	Uncharacterised protein	NA	NA	NA	NA
SQF07665.1\|1193580_1194057_-	phosphohydrolase	NA	NA	NA	NA
SQF07666.1\|1194077_1194974_-	GTP-binding protein Era	NA	NA	NA	NA
SQF07667.1\|1195093_1195426_-	diacylglycerol kinase	NA	NA	NA	NA
SQF07668.1\|1195481_1195979_-\|protease	metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_8

1687586 : 1705792

Streptococcus_phage(53.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SQF08102.1\|1687586_1689569_-	DNA mismatch repair protein	A0A1B2LRQ5	Wolbachia_phage	2.3e-62	30.3
SQF08103.1\|1689663_1690809_-	DNA integration/recombination/inversion protein	A0A1X9I5Y5	Streptococcus_phage	7.9e-84	44.9
SQF08104.1\|1692077_1692845_-	repressor protein	Q76TK4	Streptococcus_pyogenes_phage	3.6e-72	83.1
SQF08105.1\|1692998_1693205_+	Cro/CI family phage transcriptional regulator	X2KUC2	Streptococcus_phage	2.4e-07	47.0
SQF08106.1\|1693238_1694006_+	BRO family, N-terminal domain protein	A0A0A7S0G2	Clostridium_phage	5.0e-26	53.7
SQF08107.1\|1694015_1694639_+	BRO family, N-terminal domain protein	A0A1W6JPC3	Staphylococcus_phage	2.5e-39	43.3
SQF08108.1\|1694638_1694908_+	Prophage antirepressor	NA	NA	NA	NA
SQF08109.1\|1695163_1695505_+	phage protein	NA	NA	NA	NA
SQF08110.1\|1695491_1695713_+	Uncharacterised protein	NA	NA	NA	NA
SQF08111.1\|1695715_1695907_+	phage protein	NA	NA	NA	NA
SQF08112.1\|1695918_1696248_+	phage protein	NA	NA	NA	NA
SQF08113.1\|1696250_1696523_+	Uncharacterised protein	A0A1X9I5U9	Streptococcus_phage	6.1e-19	60.0
SQF08114.1\|1696523_1697381_+	replication protein	A0A1X9I6L2	Streptococcus_phage	4.5e-124	74.8
SQF08115.1\|1697349_1699038_+	phage/plasmid primase, P4 family, C-terminal domain protein	A0A1X9I717	Streptococcus_phage	2.5e-259	82.1
SQF08116.1\|1699324_1699498_+	Uncharacterised protein	A0A1X9I5U0	Streptococcus_phage	1.9e-10	59.6
SQF08117.1\|1699503_1699677_+	phage protein	NA	NA	NA	NA
SQF08118.1\|1699678_1700188_+	phage protein	A0A1X9I5U4	Streptococcus_phage	1.1e-29	63.5
SQF08119.1\|1700261_1700750_+	phage protein	A0A1X9I5V2	Streptococcus_phage	5.2e-45	54.3
SQF08120.1\|1701153_1701516_+	phage protein	A0A2H4JFS1	uncultured_Caudovirales_phage	3.5e-06	30.8
SQF08121.1\|1701490_1701874_+	phage protein	Q938L8	Temperate_phage	3.7e-14	42.1
SQF08122.1\|1702074_1702623_+	secreted phage protein	NA	NA	NA	NA
SQF08123.1\|1703236_1705792_-	DNA mismatch repair protein mutS	A0A1V0SGG8	Hokovirus	5.2e-43	23.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LS483329

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection